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Conserved domains on  [gi|2276931136|gb|UTX44334|]
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hypothetical protein GPU96_11g21330 [Encephalitozoon hellem]

Protein Classification

SRP_TPR_like domain-containing protein( domain architecture ID 11246677)

SRP_TPR_like domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SRP_TPR_like pfam17004
Putative TPR-like repeat; This is a family of microsporidial sequences that are likely to fold ...
 8-116 1.81e-47

Putative TPR-like repeat; This is a family of microsporidial sequences that are likely to fold into a TPR-like structure. Many sequences are annotated as being signal recognition proteins.


:

Pssm-ID: 435703 [Multi-domain]  Cd Length: 109  Bit Score: 155.63  E-value: 1.81e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2276931136   8 KNDCHEEISRLEHPEFNQFRVVAYINLGKFEEALRYAEKDSFERAYALYKLKKYKKALRILKRIDTEGSKVLASQCLYYL 87
Cdd:pfam17004   1 TNEEHEEILRLEGPEYNRFKVIALIHLDKYKEALKYAKKGSFEKAYALYKLKKYKKALKILRKMDSEGSRVLASQCLYFL 80

                          90       100
                  ....*....|....*....|....*....
gi 2276931136  88 GYYNTAYKILSEVKKDDDIVVNLQAMKGL 116
Cdd:pfam17004  81 GYYNKAYKILSECKRDDEIVVNLQAMKSL 109
 
Name Accession Description Interval E-value
SRP_TPR_like pfam17004
Putative TPR-like repeat; This is a family of microsporidial sequences that are likely to fold ...
 8-116 1.81e-47

Putative TPR-like repeat; This is a family of microsporidial sequences that are likely to fold into a TPR-like structure. Many sequences are annotated as being signal recognition proteins.


Pssm-ID: 435703 [Multi-domain]  Cd Length: 109  Bit Score: 155.63  E-value: 1.81e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2276931136   8 KNDCHEEISRLEHPEFNQFRVVAYINLGKFEEALRYAEKDSFERAYALYKLKKYKKALRILKRIDTEGSKVLASQCLYYL 87
Cdd:pfam17004   1 TNEEHEEILRLEGPEYNRFKVIALIHLDKYKEALKYAKKGSFEKAYALYKLKKYKKALKILRKMDSEGSRVLASQCLYFL 80

                          90       100
                  ....*....|....*....|....*....
gi 2276931136  88 GYYNTAYKILSEVKKDDDIVVNLQAMKGL 116
Cdd:pfam17004  81 GYYNKAYKILSECKRDDEIVVNLQAMKSL 109
 
Name Accession Description Interval E-value
SRP_TPR_like pfam17004
Putative TPR-like repeat; This is a family of microsporidial sequences that are likely to fold ...
 8-116 1.81e-47

Putative TPR-like repeat; This is a family of microsporidial sequences that are likely to fold into a TPR-like structure. Many sequences are annotated as being signal recognition proteins.


Pssm-ID: 435703 [Multi-domain]  Cd Length: 109  Bit Score: 155.63  E-value: 1.81e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2276931136   8 KNDCHEEISRLEHPEFNQFRVVAYINLGKFEEALRYAEKDSFERAYALYKLKKYKKALRILKRIDTEGSKVLASQCLYYL 87
Cdd:pfam17004   1 TNEEHEEILRLEGPEYNRFKVIALIHLDKYKEALKYAKKGSFEKAYALYKLKKYKKALKILRKMDSEGSRVLASQCLYFL 80

                          90       100
                  ....*....|....*....|....*....
gi 2276931136  88 GYYNTAYKILSEVKKDDDIVVNLQAMKGL 116
Cdd:pfam17004  81 GYYNKAYKILSECKRDDEIVVNLQAMKSL 109
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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