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Conserved domains on  [gi|2324174555|gb|UYX79087|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Cantharus melanostoma]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009583)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 1-304 1.61e-176

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177201  Cd Length: 307  Bit Score: 489.77  E-value: 1.61e-176
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   1 MISSVLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILA 80
Cdd:MTH00143    4 LLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  81 LLLWQLYPSLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFSF 160
Cdd:MTH00143   84 LLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSF 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 161 IEIKESQEFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALLF 240
Cdd:MTH00143  164 IEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLF 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2324174555 241 FGGSSMMFIESDVAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIAIMS 304
Cdd:MTH00143  244 FGGSSVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
 
Name Accession Description Interval E-value
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 1-304 1.61e-176

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 489.77  E-value: 1.61e-176
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   1 MISSVLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILA 80
Cdd:MTH00143    4 LLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  81 LLLWQLYPSLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFSF 160
Cdd:MTH00143   84 LLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSF 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 161 IEIKESQEFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALLF 240
Cdd:MTH00143  164 IEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLF 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2324174555 241 FGGSSMMFIESDVAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIAIMS 304
Cdd:MTH00143  244 FGGSSVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
NADHdh pfam00146
NADH dehydrogenase;
9-301 8.76e-103

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 302.85  E-value: 8.76e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   9 ICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILALLLWQLYP 88
Cdd:pfam00146   7 VPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIP 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  89 --SLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFSFIEIKES 166
Cdd:pfam00146  87 fgPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEA 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 167 QEFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALLFFGGSSM 246
Cdd:pfam00146 167 QAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLG 246

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2324174555 247 MFIESD-VAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIA 301
Cdd:pfam00146 247 PFPLPGlLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-303 2.43e-99

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 295.12  E-value: 2.43e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   1 MISSVLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILA 80
Cdd:COG1005    12 LIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPA 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  81 LLLWQLYP--SLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSF 158
Cdd:COG1005    92 LLAFAVIPfgPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSL 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 159 SFIEIKESQE-FIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSA 237
Cdd:COG1005   172 NLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALAT 251

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2324174555 238 LLFFGG-------SSMMFIESDVAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIAIM 303
Cdd:COG1005   252 TLFLGGwlgpfpiLPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAV 324
 
Name Accession Description Interval E-value
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 1-304 1.61e-176

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 489.77  E-value: 1.61e-176
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   1 MISSVLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILA 80
Cdd:MTH00143    4 LLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  81 LLLWQLYPSLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFSF 160
Cdd:MTH00143   84 LLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSF 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 161 IEIKESQEFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALLF 240
Cdd:MTH00143  164 IEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLF 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2324174555 241 FGGSSMMFIESDVAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIAIMS 304
Cdd:MTH00143  244 FGGSSVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-305 4.24e-134

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 382.46  E-value: 4.24e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   1 MISSVLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILA 80
Cdd:MTH00225    4 LLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILS 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  81 LLLWQLYPSLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFSF 160
Cdd:MTH00225   84 LILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNL 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 161 IEIKESQEFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALLF 240
Cdd:MTH00225  164 FDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILF 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2324174555 241 FGGSsmmFIESDVAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIAIMSS 305
Cdd:MTH00225  244 FGGF---FVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-307 1.19e-130

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 373.72  E-value: 1.19e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   1 MISSVLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILA 80
Cdd:MTH00193    5 LINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLS 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  81 LLLWQLYPSLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFSF 160
Cdd:MTH00193   85 LLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 161 IEIKESQEFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALLF 240
Cdd:MTH00193  165 LDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMF 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2324174555 241 FGGSSMMFIesdvaFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIAIMSSLL 307
Cdd:MTH00193  245 LGGDLLSLL-----FYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 1-307 1.89e-123

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 355.59  E-value: 1.89e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   1 MISSVLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILA 80
Cdd:MTH00195    5 VIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  81 LLLWQLYPSLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFSF 160
Cdd:MTH00195   85 LILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDF 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 161 IEIKESQEFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALLF 240
Cdd:MTH00195  165 TIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILF 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2324174555 241 FGGSSMMFiesdvaFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIAIMSSLL 307
Cdd:MTH00195  245 LGGGGTII------VALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 2-307 4.95e-118

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 342.15  E-value: 4.95e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   2 ISSVLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILAL 81
Cdd:MTH00010    7 ISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILAL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  82 LLWQLYPSLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFSFI 161
Cdd:MTH00010   87 LLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFS 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 162 EIKESQEFiWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALLFF 241
Cdd:MTH00010  167 KIIMSQYS-WILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFT 245

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2324174555 242 GGSSMMFIeSDVAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIAIMSSLL 307
Cdd:MTH00010  246 SFIPSIFI-SDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-303 6.40e-116

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 336.87  E-value: 6.40e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   1 MISSVLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILA 80
Cdd:MTH00111    8 LINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  81 LLLWQLYPSLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFSF 160
Cdd:MTH00111   88 LTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 161 IEIKESQEFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALLF 240
Cdd:MTH00111  168 QTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILF 247

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2324174555 241 FGGSSMMFIES--DVAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIAIM 303
Cdd:MTH00111  248 LNPSTLNLPPElfTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSM 312
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 1-307 3.55e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 332.26  E-value: 3.55e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   1 MISSVLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILA 80
Cdd:MTH00218    5 LINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  81 LLLWQLYPSLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFSF 160
Cdd:MTH00218   85 LLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 161 IEIKESQEFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALLF 240
Cdd:MTH00218  165 EGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILF 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2324174555 241 FGGSSMMFIesdvaFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIAIMSSLL 307
Cdd:MTH00218  245 LGTSLTTIN-----LMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-299 9.68e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 331.59  E-value: 9.68e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   1 MISSVLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILA 80
Cdd:MTH00071    8 IINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  81 LLLWQLYPSLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFSF 160
Cdd:MTH00071   88 LIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 161 IEIKESQEFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALLF 240
Cdd:MTH00071  168 MNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILF 247

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2324174555 241 FGGSSMMFIE--SDVAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLL 299
Cdd:MTH00071  248 LGSTYNHLQPelSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIF 308
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-298 1.96e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 323.10  E-value: 1.96e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   1 MISSVLTYI--------CILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIA 72
Cdd:MTH00134    1 MLSTLITHIinplayivPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  73 PIFSFILALLLWQLYPSLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPL 152
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 153 FLVGSFSFIEIKESQEFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMM 232
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2324174555 233 SLFSALLFFGGSSMMFIE--SDVAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLL 298
Cdd:MTH00134  241 NTLSAILFLGASHIPTLPelTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVI 308
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-298 3.76e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 322.34  E-value: 3.76e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   1 MISSVLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILA 80
Cdd:MTH00104    3 MINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLA 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  81 LLLWQLYPSLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFSF 160
Cdd:MTH00104   83 LTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTL 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 161 IEIKESQEFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALLF 240
Cdd:MTH00104  163 STLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILF 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 241 FGGSSMMFIE--SDVAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLL 298
Cdd:MTH00104  243 LGAFHNPYMPelYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCM 302
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 2-307 1.76e-109

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 320.77  E-value: 1.76e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   2 ISSVLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILAL 81
Cdd:MTH00040    8 INLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLAL 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  82 LLWQLYPSLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFSFI 161
Cdd:MTH00040   88 LLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLS 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 162 EIKESQEFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALLFF 241
Cdd:MTH00040  168 SISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFL 247

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2324174555 242 GGSSMM---FIESDVAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIAIMSSLL 307
Cdd:MTH00040  248 GGGSPFneiFPINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
NADHdh pfam00146
NADH dehydrogenase;
9-301 8.76e-103

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 302.85  E-value: 8.76e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   9 ICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILALLLWQLYP 88
Cdd:pfam00146   7 VPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIP 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  89 --SLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFSFIEIKES 166
Cdd:pfam00146  87 fgPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEA 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 167 QEFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALLFFGGSSM 246
Cdd:pfam00146 167 QAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLG 246

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2324174555 247 MFIESD-VAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIA 301
Cdd:pfam00146 247 PFPLPGlLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-303 2.43e-99

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 295.12  E-value: 2.43e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   1 MISSVLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILA 80
Cdd:COG1005    12 LIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPA 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  81 LLLWQLYP--SLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSF 158
Cdd:COG1005    92 LLAFAVIPfgPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSL 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 159 SFIEIKESQE-FIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSA 237
Cdd:COG1005   172 NLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALAT 251

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2324174555 238 LLFFGG-------SSMMFIESDVAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIAIM 303
Cdd:COG1005   252 TLFLGGwlgpfpiLPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAV 324
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 9-301 4.67e-93

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 278.92  E-value: 4.67e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   9 ICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILALLLWQLYP 88
Cdd:MTH00054   13 VPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIP 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  89 --SLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFSFIEIKES 166
Cdd:MTH00054   93 ygEGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLA 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 167 QEFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALLFFGGSSM 246
Cdd:MTH00054  173 QKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLV 252

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 247 MFIESD-----VAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIA 301
Cdd:MTH00054  253 ISGPTSyfsnfVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVS 312
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
4-303 2.51e-92

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 277.07  E-value: 2.51e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   4 SVLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILALLL 83
Cdd:PRK06076   16 AVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLA 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  84 WQLYP--SLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFSFI 161
Cdd:PRK06076   96 WAVIPfgPELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLS 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 162 EIKESQEFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALLFF 241
Cdd:PRK06076  176 DIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFL 255

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2324174555 242 GG-----SSMMFIESDVAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIAIM 303
Cdd:PRK06076  256 GGwlppfPLGGGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLLTAAV 322
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-301 3.45e-90

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 271.61  E-value: 3.45e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   1 MISSVLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILA 80
Cdd:MTH00216    9 LIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  81 LLLWQLYP--SLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSF 158
Cdd:MTH00216   89 LIVWGVIPyeRGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 159 SFIEIKESQ-EFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSA 237
Cdd:MTH00216  169 SITEIVLAQnNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTT 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2324174555 238 LLFFGG---SSMMFIESDVAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIA 301
Cdd:MTH00216  249 ILFLGGwlsPIKYFKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVA 315
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 2-301 2.47e-75

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 234.53  E-value: 2.47e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   2 ISSVLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILAL 81
Cdd:MTH00029   11 IKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  82 LLWQLYPSLYSC--SYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFS 159
Cdd:MTH00029   91 LAWAIVTMDQGVflSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLN 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 160 FIEIKESQEFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALL 239
Cdd:MTH00029  171 ISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIF 250

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 240 FFGG------------------SSMMFIESDVAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIA 301
Cdd:MTH00029  251 FLGGwlspldgiptppeafsifEQIASSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTA 330
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 5-304 4.90e-66

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 208.60  E-value: 4.90e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   5 VLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFILALLLW 84
Cdd:MTH00090    3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  85 QLYPSLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFSFieik 164
Cdd:MTH00090   83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSF---- 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 165 eSQEFIWLAFLMIpvsLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALLFFGGS 244
Cdd:MTH00090  159 -VSSFSLSLFVIY---LPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKFS 234

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 245 SMMFiesdvafmlkvLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLIAIMS 304
Cdd:MTH00090  235 FLML-----------FLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLF 283
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 2-300 2.02e-54

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 178.96  E-value: 2.02e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   2 ISSVLTYICILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKeiAKPTMANYSPYF--IAPIFSFIL 79
Cdd:MTH00058    5 VSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVK--FKVYGFQSRSWFslFGVFLLVLL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  80 ALLLWQLYPSLYSCSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSFS 159
Cdd:MTH00058   83 VVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYS 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 160 FIEIKESqeFIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMSLFSALL 239
Cdd:MTH00058  163 LVDFYYS--GWLSVLLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVL 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2324174555 240 FFGGSSMMFIesdvafmlkVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLI 300
Cdd:MTH00058  241 FFGGGFVSIM---------LLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVI 292
ndhA CHL00032
NADH dehydrogenase subunit 1
 1-301 2.32e-39

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 141.63  E-value: 2.32e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   1 MISSVLTYIC-ILLAVAFFTLLERKGLSYIQLRKGPNKVGLMGLPQPIADAAKLLTKEIAKPTMANYSPYFIAPIFSFIL 79
Cdd:CHL00032   29 ILVPILTLVLgITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVIS 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  80 ALLLWQLYPSLYS--CSYFKWGILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGS 157
Cdd:CHL00032  109 ILLSYLVIPFGYHlvLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNS 188

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 158 FSFIEIKESQE---FIWLAFLMIPVS-LMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILMMS 233
Cdd:CHL00032  189 LSTVDIVEAQSkygFWGWNLWRQPIGfIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSS 268

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 234 LFSALLFFGGSSMM--------FIESDVAF------------MLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAA 293
Cdd:CHL00032  269 LFVTVLYLGGWNLSipyifipeLFEINKTGgvfgttigifitLAKTYLFLFISITTRWTLPRLRMDQLLNLGWKFLLPIS 348


                  ....*...
gi 2324174555 294 LSFLLLIA 301
Cdd:CHL00032  349 LGNLLLTT 356
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
1-300 5.18e-29

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 112.58  E-value: 5.18e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555   1 MISSVLTYICILLAVAFFTLLERKGLSYIQLRKGPnkvglmGLPQPIADAAKLLTKEIAKPTMANYsPYFIAPIFSFILA 80
Cdd:COG0650     4 ILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASW-LFRAAPYVALAAM 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555  81 LLLWQLYPSLYSCSYFKWG--ILFFLCVSAMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEVSMALILLFPLFLVGSF 158
Cdd:COG0650    77 LLAALLVPVLTTGPPLSFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGST 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174555 159 SFIEIKESQE---FIWLAFLMIPVSLMWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEY-ANILMMSL 234
Cdd:COG0650   157 SLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAAlKLFVLLSL 236

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2324174555 235 FSALLFFGGSSMMFIESDVAFMLKVLFFSFAFIWVRGSYPRFRYDLLMSLTWKGFLPAALSFLLLI 300
Cdd:COG0650   237 FVNLFLPWGIALTLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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