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Conserved domains on  [gi|2324174565|gb|UYX79092|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Oliva sericea]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009583)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 2-308 1.82e-175

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177201  Cd Length: 307  Bit Score: 487.46  E-value: 1.82e-175
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   2 YLSIMSSIFTYICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFSF 81
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  82 ILALLLWQLYPSLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGS 161
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 162 FNFTEIKESQELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFSS 241
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2324174565 242 LLFLGGSSFLFFQSDVIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMVITMLA 308
Cdd:MTH00143  241 VLFFGGSSVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
 
Name Accession Description Interval E-value
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 2-308 1.82e-175

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 487.46  E-value: 1.82e-175
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   2 YLSIMSSIFTYICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFSF 81
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  82 ILALLLWQLYPSLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGS 161
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 162 FNFTEIKESQELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFSS 241
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2324174565 242 LLFLGGSSFLFFQSDVIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMVITMLA 308
Cdd:MTH00143  241 VLFFGGSSVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
NADHdh pfam00146
NADH dehydrogenase;
13-304 2.52e-104

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 307.09  E-value: 2.52e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  13 ICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFSFILALLLWQLYP 92
Cdd:pfam00146   7 VPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIP 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  93 --SLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGSFNFTEIKES 170
Cdd:pfam00146  87 fgPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEA 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 171 QELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFSSLLFLGG-SS 249
Cdd:pfam00146 167 QAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwLG 246

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2324174565 250 FLFFQSDVIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMVI 304
Cdd:pfam00146 247 PFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLT 301
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 13-307 3.86e-100

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 297.43  E-value: 3.86e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  13 ICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFSFILALLLWQLYP 92
Cdd:COG1005    20 VFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIP 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  93 --SLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGSFNFTEIKES 170
Cdd:COG1005   100 fgPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEA 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 171 QE-LIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFSSLLFLGG-- 247
Cdd:COG1005   180 QAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGwl 259

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2324174565 248 -----SSFLFFQSDVIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMVITML 307
Cdd:COG1005   260 gpfpiLPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAV 324
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
15-298 1.10e-49

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 168.34  E-value: 1.10e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  15 ILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFSFILALLLWQLYP-- 92
Cdd:NF040610   23 VFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVAIPfg 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  93 --------SLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGSFNF 164
Cdd:NF040610  103 aviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAGSLNI 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 165 TEIKESQELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFSSLLF 244
Cdd:NF040610  183 VEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLVVLLF 262

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2324174565 245 LGGSSFLFFQSD----------VIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASL 298
Cdd:NF040610  263 LGGWNLPGFVTDipvlgiilptLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
 
Name Accession Description Interval E-value
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 2-308 1.82e-175

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 487.46  E-value: 1.82e-175
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   2 YLSIMSSIFTYICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFSF 81
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  82 ILALLLWQLYPSLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGS 161
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 162 FNFTEIKESQELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFSS 241
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2324174565 242 LLFLGGSSFLFFQSDVIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMVITMLA 308
Cdd:MTH00143  241 VLFFGGSSVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 3-307 7.64e-134

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 382.08  E-value: 7.64e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   3 LSIMSSIFTYICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFSFI 82
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  83 LALLLWQLYPSLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGSF 162
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 163 NFTEIKESQELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFSSL 242
Cdd:MTH00225  162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2324174565 243 LFLGGssfLFFQSDVIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMVITML 307
Cdd:MTH00225  242 LFFGG---FFVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLII 303
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-307 3.57e-131

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 375.26  E-value: 3.57e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   1 MYLSIMSSIFTYICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFS 80
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  81 FILALLLWQLYPSLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVG 160
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 161 SFNFTEIKESQELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFS 240
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2324174565 241 SLLFLGGSSFLFFqsdviFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMVITML 307
Cdd:MTH00193  241 VLMFLGGDLLSLL-----FYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGL 302
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 1-307 6.42e-127

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 364.45  E-value: 6.42e-127
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   1 MYLSIMSSIFTYICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFS 80
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  81 FILALLLWQLYPSLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVG 160
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 161 SFNFTEIKESQELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFS 240
Cdd:MTH00195  161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2324174565 241 SLLFLGGSsflffqSDVIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMVITML 307
Cdd:MTH00195  241 TILFLGGG------GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAI 301
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 5-304 4.51e-120

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 347.54  E-value: 4.51e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   5 IMSSIFTYICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFSFILA 84
Cdd:MTH00010    6 FISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  85 LLLWQLYPSLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGSFNF 164
Cdd:MTH00010   86 LLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSF 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 165 TEIKESQeLIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFSSLLF 244
Cdd:MTH00010  166 SKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFF 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 245 LGGSSFLFFqSDVIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMVI 304
Cdd:MTH00010  245 TSFIPSIFI-SDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMIS 303
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 1-307 7.67e-115

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 334.19  E-value: 7.67e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   1 MYLSIMSSIFTYICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFS 80
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  81 FILALLLWQLYPSLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVG 160
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 161 SFNFTEIKESQELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFS 240
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2324174565 241 SLLFLGGSSFLFFqsdviFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMVITML 307
Cdd:MTH00218  241 VILFLGTSLTTIN-----LMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSL 302
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 3-307 1.31e-112

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 328.78  E-value: 1.31e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   3 LSIMSSIFTYICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFSFI 82
Cdd:MTH00111    6 LNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  83 LALLLWQLYPSLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGSF 162
Cdd:MTH00111   86 LALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGY 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 163 NFTEIKESQELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFSSL 242
Cdd:MTH00111  166 TLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTI 245

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2324174565 243 LFLGGSSFLFFQS--DVIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMVITML 307
Cdd:MTH00111  246 LFLNPSTLNLPPElfTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSM 312
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-302 1.96e-112

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 328.50  E-value: 1.96e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   1 MYLSIMSSIFTYICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFS 80
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  81 FILALLLWQLYPSLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVG 160
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 161 SFNFTEIKESQELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFS 240
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2324174565 241 SLLFLGGSSFLFFQ--SDVIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLM 302
Cdd:MTH00071  244 TILFLGSTYNHLQPelSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTI 307
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 3-301 1.23e-110

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 323.85  E-value: 1.23e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   3 LSIMSSIFTYICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFSFI 82
Cdd:MTH00040    5 LFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  83 LALLLWQLYPSLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGSF 162
Cdd:MTH00040   85 LALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSF 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 163 NFTEIKESQELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFSSL 242
Cdd:MTH00040  165 SLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVI 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2324174565 243 LFLGGSSFL--FFQSDVIFM-LKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFL 301
Cdd:MTH00040  245 LFLGGGSPFneIFPINIIIVgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLL 306
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-313 7.45e-109

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 319.24  E-value: 7.45e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   1 MYLSIMSSI---FTYI-CILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVA 76
Cdd:MTH00134    1 MLSTLITHIinpLAYIvPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  77 PVFSFILALLLWQLYPSLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPL 156
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 157 FLVGSFNFTEIKESQELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVM 236
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2324174565 237 SLFSSLLFLGGSSFLFFQ--SDVIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSflMVITMLACSIYF 313
Cdd:MTH00134  241 NTLSAILFLGASHIPTLPelTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLA--LVIWHLALPIAF 317
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 6-302 1.85e-108

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 318.11  E-value: 1.85e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   6 MSSIFTYIC-ILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFSFILA 84
Cdd:MTH00104    3 MINILLLIIpILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLA 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  85 LLLWQLYPSLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGSFNF 164
Cdd:MTH00104   83 LTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTL 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 165 TEIKESQELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFSSLLF 244
Cdd:MTH00104  163 STLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILF 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 245 LGGSSFLFFQ--SDVIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLM 302
Cdd:MTH00104  243 LGAFHNPYMPelYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCM 302
NADHdh pfam00146
NADH dehydrogenase;
13-304 2.52e-104

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 307.09  E-value: 2.52e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  13 ICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFSFILALLLWQLYP 92
Cdd:pfam00146   7 VPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIP 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  93 --SLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGSFNFTEIKES 170
Cdd:pfam00146  87 fgPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEA 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 171 QELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFSSLLFLGG-SS 249
Cdd:pfam00146 167 QAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwLG 246

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2324174565 250 FLFFQSDVIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMVI 304
Cdd:pfam00146 247 PFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLT 301
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 13-307 3.86e-100

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 297.43  E-value: 3.86e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  13 ICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFSFILALLLWQLYP 92
Cdd:COG1005    20 VFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIP 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  93 --SLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGSFNFTEIKES 170
Cdd:COG1005   100 fgPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEA 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 171 QE-LIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFSSLLFLGG-- 247
Cdd:COG1005   180 QAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGwl 259

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2324174565 248 -----SSFLFFQSDVIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMVITML 307
Cdd:COG1005   260 gpfpiLPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAV 324
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 1-305 1.79e-94

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 282.77  E-value: 1.79e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   1 MYLSIMSSIFTYICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFS 80
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  81 FILALLLWQLYP--SLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFL 158
Cdd:MTH00054   81 LTLAFIAWGVIPygEGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 159 VGSFNFTEIKESQELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSL 238
Cdd:MTH00054  161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2324174565 239 FSSLLFLGGSSFL-----FFQSDVIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMVIT 305
Cdd:MTH00054  241 FGVILFLGGWLVIsgptsYFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVS 312
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
3-303 2.52e-94

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 282.08  E-value: 2.52e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   3 LSIMSSIFTYICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFSFI 82
Cdd:PRK06076   11 LILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  83 LALLLWQLYP--SLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVG 160
Cdd:PRK06076   91 PAFLAWAVIPfgPELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAG 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 161 SFNFTEIKESQELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFS 240
Cdd:PRK06076  171 SLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALI 250

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2324174565 241 SLLFLGGSSFLFFQSD-----VIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMV 303
Cdd:PRK06076  251 TTLFLGGWLPPFPLGGgipgaIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 5-307 1.01e-93

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 280.85  E-value: 1.01e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   5 IMSSIFTYICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFSFILA 84
Cdd:MTH00216    9 LIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  85 LLLWQLYP--SLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGSF 162
Cdd:MTH00216   89 LIVWGVIPyeRGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 163 NFTEIKESQ-ELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFSS 241
Cdd:MTH00216  169 SITEIVLAQnNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTT 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2324174565 242 LLFLGG---SSFLFFQSDVIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMVITML 307
Cdd:MTH00216  249 ILFLGGwlsPIKYFKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 9-303 7.97e-76

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 235.68  E-value: 7.97e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   9 IFTYICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFSFILALLLW 88
Cdd:MTH00029   14 LIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAW 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  89 QLYPSLYAS--SYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGSFNFTE 166
Cdd:MTH00029   94 AIVTMDQGVflSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISE 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 167 IKESQELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFSSLLFLG 246
Cdd:MTH00029  174 IVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLG 253

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2324174565 247 G------------SSFLFFQ------SDVIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMV 303
Cdd:MTH00029  254 GwlspldgiptppEAFSIFEqiasskSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVIL 328
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 13-307 7.31e-67

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 210.91  E-value: 7.31e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  13 ICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFSFILALLLWQLYP 92
Cdd:MTH00090    7 IFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLP 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  93 SLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGSFNFTEIkesqe 172
Cdd:MTH00090   87 YFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVSS----- 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 173 liwFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFSSLLFLGGSSFLF 252
Cdd:MTH00090  162 ---FSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKFSFLML 238

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2324174565 253 FqsdvifmlkvlFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMVITML 307
Cdd:MTH00090  239 F-----------LIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVL 282
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 7-304 1.01e-52

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 174.73  E-value: 1.01e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   7 SSIFTYICILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKeiAKPTMANYSPYF--VAPVFSFILA 84
Cdd:MTH00058    6 SGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVK--FKVYGFQSRSWFslFGVFLLVLLV 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  85 LLLWQLYPSLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGSFNF 164
Cdd:MTH00058   84 VFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSL 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 165 TEIKESqelIWFSFIMIPVSLIWFVTCI-AETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFSSLL 243
Cdd:MTH00058  164 VDFYYS---GWLSVLLFPLIYILWLVCIlCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVL 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2324174565 244 FLGGSSFLFFqsdvifmlkVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMVI 304
Cdd:MTH00058  241 FFGGGFVSIM---------LLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVI 292
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
15-298 1.10e-49

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 168.34  E-value: 1.10e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  15 ILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFSFILALLLWQLYP-- 92
Cdd:NF040610   23 VFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVAIPfg 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  93 --------SLYASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGSFNF 164
Cdd:NF040610  103 aviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAGSLNI 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 165 TEIKESQELIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYANILVMSLFSSLLF 244
Cdd:NF040610  183 VEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLVVLLF 262

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2324174565 245 LGGSSFLFFQSD----------VIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASL 298
Cdd:NF040610  263 LGGWNLPGFVTDipvlgiilptLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-305 3.73e-41

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 146.63  E-value: 3.73e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   2 YLSIMSSIFTYIC-ILLAVAFFTLLERKGLSYMQIRKGPNKVGVAGLPQPIADAAKLLTKEIAKPTMANYSPYFVAPVFS 80
Cdd:CHL00032   26 LIWILVPILTLVLgITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIA 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  81 FILALLLWQLYPSLY--ASSYFKWGVLFFLCVSGMNVYGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFL 158
Cdd:CHL00032  106 VISILLSYLVIPFGYhlVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLL 185

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 159 VGSFNFTEIKESQEL-------IWFSFIMIpvsLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEYA 231
Cdd:CHL00032  186 SNSLSTVDIVEAQSKygfwgwnLWRQPIGF---IVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYL 262

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 232 NILVMSLFSSLLFLGGSSFL--------FFQSD------------VIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWK 291
Cdd:CHL00032  263 NLLVSSLFVTVLYLGGWNLSipyifipeLFEINktggvfgttigiFITLAKTYLFLFISITTRWTLPRLRMDQLLNLGWK 342

                         330
                  ....*....|....
gi 2324174565 292 GFLPASLSFLMVIT 305
Cdd:CHL00032  343 FLLPISLGNLLLTT 356
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
4-304 1.26e-30

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 117.21  E-value: 1.26e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565   4 SIMSSIFTYICILLAVAFFTLLERKGLSYMQIRKGPnkvgvaGLPQPIADAAKLLTKEIAKPTMANYsPYFVAPVFSFIL 83
Cdd:COG0650     3 LILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASW-LFRAAPYVALAA 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565  84 ALLLWQLYPSLYASSYFKWGVLFFLCVSGMNV--YGTLLAGWASNSKYALLGSLRAIAQTISYEISMALILLFPLFLVGS 161
Cdd:COG0650    76 MLLAALLVPVLTTGPPLSFSGDLIVLVYLLALarFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGS 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2324174565 162 FNFTEIKESQE---LIWFSFIMIPVSLIWFVTCIAETNRAPFDFAEGESELVSGFNIEYGAAGFALIFLAEY-ANILVMS 237
Cdd:COG0650   156 TSLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAAlKLFVLLS 235

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2324174565 238 LFSSLLFLGGSSFLFFQSDVIFMLKVLFFAFVFIWVRASYPRFRYDLLMGLTWKGFLPASLSFLMVI 304
Cdd:COG0650   236 LFVNLFLPWGIALTLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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