|
Name |
Accession |
Description |
Interval |
E-value |
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
1-661 |
0e+00 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 1223.08 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 1 MTIPRVTLLAVAISAAMLSPLAHAADPDTVVVTATGFEQKIQNAPASISVISKQQIEDKAYRDVTDALKDVPGVVVTGGG 80
Cdd:PRK13513 9 HKAALVIAAAISSQAYAAEKTNTATPTDTMVVTASGFQQRIQDAPASISVVTREQLENKAYRDVTDALKDVPGVVVTGGG 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 81 SSSDISIRGMASQYTLFLVNGKRVSTRSTRPNSDNSGIEQGWLPPLESIERIEVIRGPMSSLYGSDAMGGVINIITKKVS 160
Cdd:PRK13513 89 STSDISIRGMAAKYTLILVDGKRVDTRSTRPNSDGSGIEQGWLPPLAAIERIEVVRGPMSSLYGSDAMGGVINIITRKVQ 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 161 ntKAWTGSLHGDATFQENHDSGDIFQTNAYASGPLIDGLLGAKVTGLLSRRAEDQILNGFNEQKMRNGGITLNFTPDEQN 240
Cdd:PRK13513 169 --KEWHGSLRADATLQEDSKSGDIFQTNAYASGPLIDGLLGLKVSGLLSHRSEDKIIDGYNEQRMRNGTATFSLTPDDNN 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 241 DFDLDFARELQDRNSTPGKSKATEtcrgatctpNSKSETRYEHTTYSLTHSGYYSDFNTSSYIQQEETNNPVRKMRSYNT 320
Cdd:PRK13513 247 EFDFEIGRYVQDRNSTPGRTLALN---------GTNSDTQYDRNNYAITHNGYYDFGNSTSYIQRDETRNPSRQMKSVDT 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 321 TFNNQNQIFLGDHTLTLGGQYRYEKLRDNGNQLEAADGLNKLTRWSWALFAEDEWAMTDSFTATGGLRMDKDQNYGTNWT 400
Cdd:PRK13513 318 IFNTQTSFLLDDHTLSLGGQYRYEELYDKGNQLPSASDLNKLTRWSWALFAEDEWQMTNDFALTGGIRMDQDQNYGTHWT 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 401 PRGYGVWHLAEQWTLKGGVSAGYRAPDLRQSSASWGQATGGGRLDGMIVGNPDLKPEKSLSEEIALLWDNNDSLNAGVTL 480
Cdd:PRK13513 398 PRLYGVWHLADQWTLKGGVSTGYRSPDLRQATDNWGQLTGGGGLPALILGNSDLKPEKSISQEIGILWDNQENLNASVTL 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 481 FNTDFKNKITEVRRC-NSSADPACTIGGHAYDFVSDRVNVDKANMRGVESTFGWKITQDVNWTANYTYTESEQKSGQFSG 559
Cdd:PRK13513 478 FNTDFKDKITEVRNCdTTNTDGQCVFNGINYDFISDRINVDKANMRGVEATFNWDINQAWSLATNYTFTQSEQKSGAFAG 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 560 KPLNKMPKHMFNTTLDWQATQDVGFWSRLNFRGKSSEYLSRTSMSQGTPSYTQVDVGLRYNANKNLLVTAGVYNVLDKQI 639
Cdd:PRK13513 558 QPLNQMPKHMANATLNWQTTEDFATWIRINYRGKTSEYLNRTSMGSGTPSYTFVDLGASYQLTKELRLMGGVYNLLDKRV 637
|
650 660
....*....|....*....|..
gi 1737286991 640 DYETYDTVLDGRRYTVGMTYSF 661
Cdd:PRK13513 638 DIDVNDKVLDGRRYMVGASYDF 659
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
1-628 |
1.53e-126 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 387.68 E-value: 1.53e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 1 MTIPRVTLLAVAISAAmLSPLAHAADPDTVVVTATGFEQKIQNAPASISVISKQQIEDKAYRDVTDALKDV---PGVVVT 77
Cdd:COG4771 2 LLASLLLLLALAAQAA-DALAEDATELEEVVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLpgvSVTRSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 78 GGGSSSDISIRGMASQYTLFLVNGKRVSTRSTRPNSDNSGIeqgwlpPLESIERIEVIRGPMSSLYGSDAMGGVINIITK 157
Cdd:COG4771 81 GRGGSSGISIRGLGGDRVLVLIDGVPVNNPALGGGGDLSYI------PPDDIERIEVIRGPASALYGSDAIGGVINIITK 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 158 KVSNTkaWTGSLHGDATFQENHDsgdiFQTNAYASGPliDGLLGAKVTGLLSRR-----AEDQILNGFNEQKMRNGGITL 232
Cdd:COG4771 155 KPTDE--LEGSVSLGYGSNGNGT----YSGSLSLGGP--GDKLSFLLSGSYRDRdgyldYRNGGFVGNSGYERYNLNAKL 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 233 NFTPDEQNDFDLDFARELQDRNSTPGKSKATETCRGatctPNSKSETRYEHTTYSLTHSG----------YYSDFNTSS- 301
Cdd:COG4771 227 GYRLSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSD----NAGDRDTTTDRGNYSLRYNGdlgdnldlslYYSRTDRDSt 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 302 YIQQEETNNPVRKMRSYNTTFNNQNQIFLGD-HTLTLGGQYRYEKLRDNGNqleaaDGLNKLTRWSWALFAEDEWAMTDS 380
Cdd:COG4771 303 NGSLGGSTGSFSDSDDTTYGLELDLTYPLGGnHTLTLGAEYRYDDLDSSSF-----LGGADASRDTYGLFAQDEWKLTDK 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 381 FTATGGLRMDKDQNYG----TNWTPRGYGVWHLAEQWTLKGGVSAGYRAPDLRQSSASWGQATGGGrldgmIVGNPDLKP 456
Cdd:COG4771 378 LTLTAGLRYDYYSTFGasnyTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGTGTPGRY-----VLGNPDLKP 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 457 EKSLSEEIALLWD-NNDSLNAGVTLFNTDFKNKITEVRRCNSSADpactigghaydfVSDRVNVDKANMRGVESTFGWKI 535
Cdd:COG4771 453 ETSDNYELGLEYRlGNGGLSLSLTGFYTDIKDLIVLVPVGPGPGD------------VLQYENVGKARTYGLELELKYRL 520
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 536 TQDVNWTANYTYTESEQKSGQfSGKPLNKMPKHMFNTTLDWQATQDVGFWSRLNFRGKSSEYLSRTSMSQGTPSYTQVDV 615
Cdd:COG4771 521 GKGLTLTASYTYLDSKIDDGD-TGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTPPSGRLEGYTPGYTLLDL 599
|
650
....*....|...
gi 1737286991 616 GLRYNANKNLLVT 628
Cdd:COG4771 600 RASYKLTKNLTLS 612
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
47-661 |
1.44e-98 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 315.54 E-value: 1.44e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 47 SISVISKQQIEDKAYRDVTDALKDV--PGVVVTGGGSSSDISIRGMASQYTLFLVNGKRVSTRSTRPNSDNsgieqgWLP 124
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIpgVSVTRGGGGGGSTISIRGFGPDRTLVLVDGLPLASSNYGRGVDL------NTI 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 125 PLESIERIEVIRGPMSSLYGSDAMGGVINIITKKVSNTkaWTGSLHGDATFQENHDSGDifqTNAYASGPL-IDGLLGAK 203
Cdd:cd01347 75 PPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDE--FGGSVTAGYGSDNSGSSGG---GGFDVSGALaDDGAFGAR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 204 VTGLLSRRAEDQILNGF---NEQKMRNGGITLNFTPDEQNDFDLDF----ARELQDRNSTPGKSKATETCRGATCTPNSK 276
Cdd:cd01347 150 LYGAYRDGDGTIDGDGQaddSDEERYNVAGKLDWRPDDDTRLTLDAgyqdQDADGPGGTLPANGTGSSLGGGPSSNTNGD 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 277 SETRYEHTTYSLTHSGYYSDFNTS--------SYIQQEETNNPVRKMRSYN-------------------TTFNNQNQ-- 327
Cdd:cd01347 230 RDWDYRDRYRKRASLGLEHDLNDTgwtlranlSYSYTDNDGDPLILNGGNNaaggdlgrsgysserdttqLGFDAGLNap 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 328 --IFLGDHTLTLGGQYRYEKLRdngnqleaadglnkltRWSWALFAEDEWAMTDSFTATGGLRMDK-------------- 391
Cdd:cd01347 310 fgTGPVAHTLTLGVEYRREELD----------------EKQTALYAQDTIELTDDLTLTLGLRYDHydqdskdtiaggtt 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 392 DQNYGTNWTPRGYGVWHLAEQWTLKGGVSAGYRAPDLRQSSASWGQATGGgrldgmIVGNPDLKPEKSLSEEIALLWDNN 471
Cdd:cd01347 374 AKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTA------AVGNPNLKPEKSKQYELGLKYDPG 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 472 DSLNAGVTLFNTDFKNKITEVRRCNSSADpactigghaydfVSDRVNVDKANMRGVESTFGWKITQDVNWTANYTYTESE 551
Cdd:cd01347 448 DGLTLSAALFRIDIKNEIVSTPTNTGLGL------------VTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTE 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 552 QK--SGQFSGKPLNKMPKHMFNTTLDWQATQD-VGFWSRLNFRGKSSEYLSRTSMSQGTPSYTQVDVGLRYNANKNLLVT 628
Cdd:cd01347 516 VKrtDGATTGNRLPGIPKHTANLGLDYELPDEgLTAGGGVRYRGKQYADTANGNNTVKVPGYTLVDLSASYQFTKNLTLR 595
|
650 660 670 680
....*....|....*....|....*....|....*....|
gi 1737286991 629 AGVYNVLDK-------QIDYETYDTVLDGRRYTVGMTYSF 661
Cdd:cd01347 596 LGVNNLFDKdyytslsVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
28-661 |
2.26e-58 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 208.40 E-value: 2.26e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 28 DTVVVTATGFEQKIQNAPASISVISKQQIEDKAYRDVTDALKDVP--GVVVTGGGSSSDISIRGMASQYTLFLVNGkrvs 105
Cdd:TIGR01785 2 DTVTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPgvDVTGGGRPPGQSINIRGLQDNRVLVVVDG---- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 106 trsTRPNSDNSGIEQG--WLPPlESIERIEVIRGPMSSLYGSDAMGGVINIITKK----VSNTKAWTGSLHGDAtfqenh 179
Cdd:TIGR01785 78 ---ARQNYQRGGAHNGslFVDP-ELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDaadlLRPGQLFGGLAKLSY------ 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 180 DSGDI-FQTNAYASGPLIDGllgakVTGLLS---RRAED-QILNGFN----EQKMRNGGITLNFTPDEQNDFDL-DFARE 249
Cdd:TIGR01785 148 GSNNNsFGGSVAVAGRLDDN-----LDALVAatyRDGGNyRNGNKEEatnsAYVQKNLLAKLGWQLDDAQRLEFsYFTTE 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 250 LQDRNstPGKSKATETCRGATCTPNSKSETRYEHTTYS---LTHSGYYSDFNTSSYIQQEETNNPV----------RKMR 316
Cdd:TIGR01785 223 GSLDE--AQNSGPGTEYVLGSSSTLLASSTRDRSATLTynwTPEDNPWLDATASLYYNRTENDNDRsargvgreegYQYT 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 317 SYNTTFNNQNQIFLGDH-TLTLGGQYRYEKLRDNGNQLEAADGLNKLT----RWSWALFAEDEWAMTDS-FTATGGLRMD 390
Cdd:TIGR01785 301 TYGATLQNTSRFDVASWsTLTYGVDWMKDKRRTESFDPNSVTTIVPNPpsakEYFFGLFLQDNIPLLDDrLTLSAGLRYD 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 391 ----KDQNY---------GTNWTPRGYGVWHLAEQWTLKGGVSAGYRAPDLRQSSASWGQATGGGRLdgMIVGNPDLKPE 457
Cdd:TIGR01785 381 hyklSPKTTadteavdrsYSRWSPSLGLSYKPVDWLTLYASYSQGFRAPSIDELYGTGDHPGTPGGY--TFAPNPNLKPE 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 458 KSLSEEI------ALLWDNNDSLNAGVTLFNTDFKNKI--TEVRRCNSSAdpactigghAYDFVSDRVNVDKANMRGVES 529
Cdd:TIGR01785 459 TSKTWELganlsfDNLLLDNDQLQFKVAYFYNDVKDFIdlTIGVTDNVTA---------GMNNITQYVNIDGARIRGIEA 529
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 530 TFGWKiTQDVNWTANYTYTESEQKSgqfSGKPLNKMPKHMFNTTLDWQATQ-DVGFWSRLNFRGKSSEYLSRTSMSQG-- 606
Cdd:TIGR01785 530 SASYD-AGLWATGLSYGYTIGKDQN---TNQWLSNIPPLKLVVTVGYRFPDrRLDLGAKAAYYERQSESPTTEDVAANgl 605
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 607 --TPSYTQVDVGLRYNAN--KNLLVTAGVYNVLDKQ-IDYETYDTVLDGRRYTVGMTYSF 661
Cdd:TIGR01785 606 ltTPGYTVVDLYATYQPNavKGLTVRFGVNNLTDRKyTPAQSVPGAGPGRNFKGSVKYQF 665
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
233-660 |
5.16e-50 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 181.12 E-value: 5.16e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 233 NFTPDEQNDFDLDFARELQDRNSTPGKSKATetcrgatctpnskseTRYEHTTYSLThSGYYSDFNTSSYIQQEETNNPV 312
Cdd:pfam00593 54 DYSDTDRKRLSLGYDYDLGDGLSWLSTLRLG---------------LRYSSLDGDYT-SNSSGLSGAGDYLSDDRLYGLY 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 313 RKMRSYNTTFNNQNQIFLGDHTLTLGGQYRYEKLRDNGNQLEAA---DGLNKLTRWSWALFAEDEWAMTDSFTATGGLRM 389
Cdd:pfam00593 118 GLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDDAYDPYDPANpssSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRY 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 390 DKDQNYGTN--------------WTPRGYGVWHLAEQWTLKGGVSAGYRAPDLRQSSASWGQATGGGRldgmIVGNPDLK 455
Cdd:pfam00593 198 DHYSTDGDDgngggdnfsrsysaFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGGGGGAV----AGGNPDLK 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 456 PEKSLSEEIALLWDNnDSLNAGVTLFNTDFKNKITEVRRCNSSADPACTIgghaydfvsdrVNVDKANMRGVESTFGWKI 535
Cdd:pfam00593 274 PETSDNYELGLKYDD-GRLSLSLALFYIDIKNLITSDPDGPGLGGTVYTY-----------TNVGKARIRGVELELSGRL 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 536 TQDVNWTANYTYTESE-QKSGQFSGKPLNKMPKHMFNTTLDWQatQDVGFWS---RLNFRGKSSEYLSRTSMSQGTPSYT 611
Cdd:pfam00593 342 WGLGLSGGGYTYTDADdDADADDTGNPLPNVPRHTANLGLTYD--FPLGGWGarlGARYVGSGERRYGDAANTFKTPGYT 419
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1737286991 612 QVDVGLRYNANKNLLVTAGVYNVLDKQIDY-------ETYDTVLDGRRYTVGMTYS 660
Cdd:pfam00593 420 LVDLSAGYRLNKNLTLRLGVNNLFDKYYKRyyssgggNLGGYPGPGRTFYLGLSYK 475
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
1-661 |
0e+00 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 1223.08 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 1 MTIPRVTLLAVAISAAMLSPLAHAADPDTVVVTATGFEQKIQNAPASISVISKQQIEDKAYRDVTDALKDVPGVVVTGGG 80
Cdd:PRK13513 9 HKAALVIAAAISSQAYAAEKTNTATPTDTMVVTASGFQQRIQDAPASISVVTREQLENKAYRDVTDALKDVPGVVVTGGG 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 81 SSSDISIRGMASQYTLFLVNGKRVSTRSTRPNSDNSGIEQGWLPPLESIERIEVIRGPMSSLYGSDAMGGVINIITKKVS 160
Cdd:PRK13513 89 STSDISIRGMAAKYTLILVDGKRVDTRSTRPNSDGSGIEQGWLPPLAAIERIEVVRGPMSSLYGSDAMGGVINIITRKVQ 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 161 ntKAWTGSLHGDATFQENHDSGDIFQTNAYASGPLIDGLLGAKVTGLLSRRAEDQILNGFNEQKMRNGGITLNFTPDEQN 240
Cdd:PRK13513 169 --KEWHGSLRADATLQEDSKSGDIFQTNAYASGPLIDGLLGLKVSGLLSHRSEDKIIDGYNEQRMRNGTATFSLTPDDNN 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 241 DFDLDFARELQDRNSTPGKSKATEtcrgatctpNSKSETRYEHTTYSLTHSGYYSDFNTSSYIQQEETNNPVRKMRSYNT 320
Cdd:PRK13513 247 EFDFEIGRYVQDRNSTPGRTLALN---------GTNSDTQYDRNNYAITHNGYYDFGNSTSYIQRDETRNPSRQMKSVDT 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 321 TFNNQNQIFLGDHTLTLGGQYRYEKLRDNGNQLEAADGLNKLTRWSWALFAEDEWAMTDSFTATGGLRMDKDQNYGTNWT 400
Cdd:PRK13513 318 IFNTQTSFLLDDHTLSLGGQYRYEELYDKGNQLPSASDLNKLTRWSWALFAEDEWQMTNDFALTGGIRMDQDQNYGTHWT 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 401 PRGYGVWHLAEQWTLKGGVSAGYRAPDLRQSSASWGQATGGGRLDGMIVGNPDLKPEKSLSEEIALLWDNNDSLNAGVTL 480
Cdd:PRK13513 398 PRLYGVWHLADQWTLKGGVSTGYRSPDLRQATDNWGQLTGGGGLPALILGNSDLKPEKSISQEIGILWDNQENLNASVTL 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 481 FNTDFKNKITEVRRC-NSSADPACTIGGHAYDFVSDRVNVDKANMRGVESTFGWKITQDVNWTANYTYTESEQKSGQFSG 559
Cdd:PRK13513 478 FNTDFKDKITEVRNCdTTNTDGQCVFNGINYDFISDRINVDKANMRGVEATFNWDINQAWSLATNYTFTQSEQKSGAFAG 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 560 KPLNKMPKHMFNTTLDWQATQDVGFWSRLNFRGKSSEYLSRTSMSQGTPSYTQVDVGLRYNANKNLLVTAGVYNVLDKQI 639
Cdd:PRK13513 558 QPLNQMPKHMANATLNWQTTEDFATWIRINYRGKTSEYLNRTSMGSGTPSYTFVDLGASYQLTKELRLMGGVYNLLDKRV 637
|
650 660
....*....|....*....|..
gi 1737286991 640 DYETYDTVLDGRRYTVGMTYSF 661
Cdd:PRK13513 638 DIDVNDKVLDGRRYMVGASYDF 659
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
4-661 |
0e+00 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 764.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 4 PRVTLLAVAISAAMLSPLAHAADPD----TVVVTATGFEQKIQNAPASISVISKQQIEDKAYRDVTDALKDVPGVVVTGG 79
Cdd:PRK13483 6 AQVISALCLLPAVFVTHALAQAAPDktmeTVVVTASGYEQQIRDAPASISVITREDLENRFYRDLTDALLDVPGVVVTGG 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 80 GSSSDISIRGMASQYTLFLVNGKRVSTRSTRPNSDNSGIEQGWLPPLESIERIEVIRGPMSSLYGSDAMGGVINIITKKV 159
Cdd:PRK13483 86 GDRTDISLRGMGSQYTLILVDGKRQSSRETRPNSDGPGVEQAWTPPLAAIERIEVIRGPMSSLYGSDAIGGVINIITRKV 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 160 SNTkaWTGSLHGDATFQENHDSGDIFQTNAYASGPLIDGLLGAKVTGLLSRRAEDQILNGFNEQKMRNGGITLNFTPDEQ 239
Cdd:PRK13483 166 PNE--WQGEVRLDTTLQENSDSGNVYQANFFVNGPLIKDLLGLQLYGQYTQREEDDIEGGYRDKDARSLTAKLALTPNED 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 240 NDFDLDFARELQDRNSTPGKSkATETCRGATC----TPNSkSETRYEHTTYSLTHSGYYsDFNTS-SYIQQEETNNPVRK 314
Cdd:PRK13483 244 HDIMLEVGTSNQERDSTVGKT-VAPLAPGESCgrrgCPES-STTEYERSTVSLSHTGRW-DFGTSdTYIQHEEFDNKSRE 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 315 MRSYNTTFNNQNQIFLG-DHTLTLGGQYRYEKLRD-NGNQLeaaDGLNKLTRWSWALFAEDEWAMTDSFTATGGLRMDKD 392
Cdd:PRK13483 321 MKIKNTDFQSSLVAPLGqEHTLTFGAAYNHQDLTDeTSNQI---SDLTDISRTQWAVFSEDEWRIADDFALTGGLRLDHD 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 393 QNYGTNWTPRGYGVWHLAEQWTLKGGVSAGYRAPDLRQSSASWGQATGGGRldgmIVGNPDLKPEKSLSEEIALLWDNND 472
Cdd:PRK13483 398 ENFGGHVSPRVYGVWNLAPSWTVKGGVSTGFRAPSLRQTTPDWGQVSRGGN----IYGNPDLKPETSLNKELGLYYDLGS 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 473 SLNAGVTLFNTDFKNKITEVrrcnssADPA--CTIGGHayDFVSD---RVNVDKANMRGVESTFGWKITQDVNWTANYTY 547
Cdd:PRK13483 474 GLTASLTVFYNEFKDKITRV------ACPAtqCTDGPN--QFGADpttYVNIDEAVTQGVEASLSYPITSTLSLSGNYTY 545
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 548 TESEQKSGQFSGKPLNKMPKHMFNTTLDWQATQDVGFWSRLNFRGKSSEylSRTSMSQGT---PSYTQVDVGLRYNANKN 624
Cdd:PRK13483 546 TDSEQKSGAYKGSPLNQLPKHLFQASLNWEPTDRLNSWARVNYRGEESQ--PTTGPSSSSfiaPSYTFLDLGANYQLTDN 623
|
650 660 670
....*....|....*....|....*....|....*..
gi 1737286991 625 LLVTAGVYNVLDKQIDYETYDTVLDGRRYTVGMTYSF 661
Cdd:PRK13483 624 LKLSAGIYNLFDKEINYEEYGYVEDGRRYWLGMTYSF 660
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
9-661 |
5.88e-171 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 504.16 E-value: 5.88e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 9 LAVAISAAMLSPLAHAADP-DTVVVTATGFEQKIQNAPASISVISKQQIEDKAYRDVTDALKDVPGVVVTGGGSSSDISI 87
Cdd:PRK13484 11 IAVMCSAVISSGYASSDKKeDTLVVTASGFTQQLRNAPASVSVITSEQLQKKPVSDLVDAVKDVEGISITGGNEKPDISI 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 88 RGMASQYTLFLVNGKRVSTRSTRPNSdNSGIEQGWLPPLESIERIEVIRGPMSSLYGSDAMGGVINIITKKVSNtKAWTG 167
Cdd:PRK13484 91 RGLSGDYTLILVDGRRQSGRESRPNG-SGGFEAGFIPPVEAIERIEVIRGPMSSLYGSDAIGGVINIITKPVNN-QTWDG 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 168 SLHGDATFQENHDSGDIFQTNAYASGPLIDGLLGAKVTGLLSRRAEDQILNGFNEQKMRNGGITLNFTPDEQNDFDLDFA 247
Cdd:PRK13484 169 VLGLGGIIQEHGKFGNSTTNDFYLSGPLIKDKLGLQLYGGMNYRKEDSISQGTPAKDNKNITATLQFTPTESQKFVFEYG 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 248 RELQDRNSTPGKSKATETCRGATCTPNSKSETRYEHTTYSLTHSGYYSDFNTSSYIQQEETNNPV--------------- 312
Cdd:PRK13484 249 KNNQVHTLTPGESLDAWTMRGNLKQPNSKRETHNSRSHWVAAWNAQGEILHPEIAVYQEKVIREVksgkkdkynhwdlny 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 313 --RKMRSYNTTFNNQNQIFLGDHTLTLGGQYRYEKLRDNGNQLEAADGLNKLTRWSWALFAEDEWAMTDSFTATGGLRMD 390
Cdd:PRK13484 329 esRKPEITNTIIDAKVTAFLPENVLTIGGQFQHAELRDDSATGKKTTETQSVSIKQKAVFIENEYAATDSLALTGGLRLD 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 391 KDQNYGTNWTPRGYGVWHLAEQWTLKGGVSAGYRAPDLRQSSASWGQATGGGRldGMIVGNPDLKPEKSLSEEIALLWDN 470
Cdd:PRK13484 409 NHEIYGSYWNPRLYAVYNLTDNLTLKGGIAKAFRAPSIREVSPGFGTLTQGGA--SIMYGNRDLKPETSVTEEIGIIYSN 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 471 NDSLNAGVTLFNTDFKNKITEVRrcNSSADPACTIGGHAYDfvsdrvNVDKANMRGVESTFGWKITQDVNWTANYTYTES 550
Cdd:PRK13484 487 DSGFSASATLFNTDFKNKLTSYD--IGTKDPVTGLNTFIYD------NVGEANIRGVELATQIPVYDKWHVSANYTFTDS 558
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 551 EQKSG-------QFSGKPLNKMPKHMFNTTLDWQATQDVGFWSRLNFRGKSSEYLSRT--SMSQGTPSYTQVDVGLRYNA 621
Cdd:PRK13484 559 RRKSDdeslngkSLKGEPLERTPRHAANAKLEWDYTQDITFYSSLNYTGKQIWAAQRNgaKVPRVRNGFTSMDIGLNYQI 638
|
650 660 670 680
....*....|....*....|....*....|....*....|....
gi 1737286991 622 NKNLLVTAGVYNVLD-KQIDYETYD---TVLDGRRYTVGMTYSF 661
Cdd:PRK13484 639 LPDTLINFAVLNVTDrKSEDIDTIDgnwQVDEGRRYWANVRVSF 682
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
5-661 |
2.11e-138 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 419.67 E-value: 2.11e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 5 RVTLLAVAISAAmLSPLAHAADPDTVVVTATGFEQKIQNAPASISVISKQQIEDKAYRDVTDALKDVPGVV-VTGGGSSS 83
Cdd:PRK10064 9 RVGLCASAISCA-WPVLAVDDDGETMVVTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQlTNEGDNRK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 84 DISIRGMASQYTLFLVNGKRVSTRST--RPNSdnsgIEQGWLPpLESIERIEVIRGPMSSLYGSDAMGGVINIITKKVSn 161
Cdd:PRK10064 88 GVSIRGLDSSYTLILIDGKRVNSRNAvfRHND----FDLNWIP-VDAIERIEVVRGPMSSLYGSDALGGVVNIITKKIG- 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 162 tKAWTGSLHGDATFQENHDSGDIFQTNAYASGPLIDGLLGAKVTGLLSRRAEDQILNGFNEQ----------KMRNGGIT 231
Cdd:PRK10064 162 -QKWHGTVTVDTTIQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDDPQNSTTTDtgetpriegfTSRDGNVE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 232 LNFTPDEQNDFDLDFARELQDRNStpgkskatetcrgatctpNSKSETRYEHTTYSLTHSGYYSDFNTS--SYIQQEETN 309
Cdd:PRK10064 241 FAWTPNQNHDFTAGYGFDRQDRDS------------------DSLDKNRLERQNYSLSHNGRWDYGNSElkYYGEKVENK 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 310 NP--VRKMRSYNTTFNNQNQIFLG--DHTLTLGGQYRYEKLRDNGNqLEAADGLNKLTRwSWALFAEDEWAMTDSFTATG 385
Cdd:PRK10064 303 NPgnSSPITSESNSIDGKYTLPLTaiNQFLTFGGEWRHDKLSDAVN-LTGGTSSKTSAS-QYALFVEDEWRIFEPLALTT 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 386 GLRMDKDQNYGTNWTPRGYGVWHLAEQWTLKGGVSAGYRAPDLRQSSASWGQATGGGRLDgmIVGNPDLKPEKSLSEEIA 465
Cdd:PRK10064 381 GVRMDDHETYGDHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGACK--IVGSPDLKPETSESWELG 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 466 LLWDNNDSLNAGV----TLFNTDFKNKITEVRRCNSSADPA-------CTIGGHAYDFVSDRVNVDKANMRGVESTFGWK 534
Cdd:PRK10064 459 LYYMGEEGWLEGVessvTVFRNDVDDRISISRTSDVNAAPGyqnfvgfETNGRGRRVPVFRYYNVNKARIQGVETELKIP 538
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 535 ITQDVNWTANYTYTESEQKSGQfSGKPLNKMPKHMFNTTLDWQ--ATQDVGFWSRLNFRGKSSEyLSRTSMSQGtpSYTQ 612
Cdd:PRK10064 539 FNDEWKLSLNYTYNDGRDVSNG-ENKPLSDLPFHTANGTLDWKplALEDWSFYVSGNYTGQKRA-DSATAKTPG--GYTI 614
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 1737286991 613 VDVGLRYNANKNLLVTAGVYNVLDKQIDYETYDTVLDGRRYTVGMTYSF 661
Cdd:PRK10064 615 WNTGAAWQVTKDVKLRAGVLNLGDKDLSRDDYSYNEDGRRYFMAVDYRF 663
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
1-628 |
1.53e-126 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 387.68 E-value: 1.53e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 1 MTIPRVTLLAVAISAAmLSPLAHAADPDTVVVTATGFEQKIQNAPASISVISKQQIEDKAYRDVTDALKDV---PGVVVT 77
Cdd:COG4771 2 LLASLLLLLALAAQAA-DALAEDATELEEVVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLpgvSVTRSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 78 GGGSSSDISIRGMASQYTLFLVNGKRVSTRSTRPNSDNSGIeqgwlpPLESIERIEVIRGPMSSLYGSDAMGGVINIITK 157
Cdd:COG4771 81 GRGGSSGISIRGLGGDRVLVLIDGVPVNNPALGGGGDLSYI------PPDDIERIEVIRGPASALYGSDAIGGVINIITK 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 158 KVSNTkaWTGSLHGDATFQENHDsgdiFQTNAYASGPliDGLLGAKVTGLLSRR-----AEDQILNGFNEQKMRNGGITL 232
Cdd:COG4771 155 KPTDE--LEGSVSLGYGSNGNGT----YSGSLSLGGP--GDKLSFLLSGSYRDRdgyldYRNGGFVGNSGYERYNLNAKL 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 233 NFTPDEQNDFDLDFARELQDRNSTPGKSKATETCRGatctPNSKSETRYEHTTYSLTHSG----------YYSDFNTSS- 301
Cdd:COG4771 227 GYRLSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSD----NAGDRDTTTDRGNYSLRYNGdlgdnldlslYYSRTDRDSt 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 302 YIQQEETNNPVRKMRSYNTTFNNQNQIFLGD-HTLTLGGQYRYEKLRDNGNqleaaDGLNKLTRWSWALFAEDEWAMTDS 380
Cdd:COG4771 303 NGSLGGSTGSFSDSDDTTYGLELDLTYPLGGnHTLTLGAEYRYDDLDSSSF-----LGGADASRDTYGLFAQDEWKLTDK 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 381 FTATGGLRMDKDQNYG----TNWTPRGYGVWHLAEQWTLKGGVSAGYRAPDLRQSSASWGQATGGGrldgmIVGNPDLKP 456
Cdd:COG4771 378 LTLTAGLRYDYYSTFGasnyTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGTGTPGRY-----VLGNPDLKP 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 457 EKSLSEEIALLWD-NNDSLNAGVTLFNTDFKNKITEVRRCNSSADpactigghaydfVSDRVNVDKANMRGVESTFGWKI 535
Cdd:COG4771 453 ETSDNYELGLEYRlGNGGLSLSLTGFYTDIKDLIVLVPVGPGPGD------------VLQYENVGKARTYGLELELKYRL 520
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 536 TQDVNWTANYTYTESEQKSGQfSGKPLNKMPKHMFNTTLDWQATQDVGFWSRLNFRGKSSEYLSRTSMSQGTPSYTQVDV 615
Cdd:COG4771 521 GKGLTLTASYTYLDSKIDDGD-TGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTPPSGRLEGYTPGYTLLDL 599
|
650
....*....|...
gi 1737286991 616 GLRYNANKNLLVT 628
Cdd:COG4771 600 RASYKLTKNLTLS 612
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
5-661 |
2.21e-119 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 371.66 E-value: 2.21e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 5 RVTLLA-VAISAAMLSPLAHAADPDTVVVTATGFEQKIQNAPASISVISKQQIEDKAYRDVTDALKDVPGVVVTGGGSSS 83
Cdd:PRK13486 2 RITTLAsVVIPCLGFSASSIAAAEDVMIVSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVDVESGTGKT 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 84 ---DISIRGMASQYTLFLVNGKRVSTRSTRPNSDNSGIEQGWLPPLESIERIEVIRGPMSSLYGSDAMGGVINIITKKvs 160
Cdd:PRK13486 82 gglEISIRGMPASYTLILIDGVRQGGSSDVTPNGFSAMNTGFMPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRK-- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 161 NTKAWTGSLHGDATFQENHDSGDIFQTNAYASGPLIDGLLGAKVTGLLSRRAEDQILNGFNEQKMR----------NGGI 230
Cdd:PRK13486 160 NADKWLSSVNAGLNLQESNKWGNSSQFNFWSSGPLVDDSVSLQVRGSTQQRQGSSVTSLSDTAATRipyptesqnyNLGA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 231 TLNFTPDEQND--FDLDFARELQD-RNSTPGkskatetcrgaTCTPNSKSETRYEHTTYSLTHSGYYSDFNTSSYIQQEE 307
Cdd:PRK13486 240 RLDWKASEQDVlwFDMDTTRQRYDnRDGQLG-----------SLTGGYDRTLRYERNKISAGYDHTFTFGTWKSYLNWNE 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 308 TNNPVRKMRSYNTT------------FNNQNQIF-------LGD-HTLTLGGQYRYEKLRDNgnqLEAADGLNKLTRWSW 367
Cdd:PRK13486 309 TENKGRELVRSVLKrdkwglagqpreLKESNLILnsllltpLGEsHLVTVGGEFQSSSMKDG---VVLASTGETFRQKSW 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 368 ALFAEDEWAMTDSFTATGGLRMDKDQNYGTNWTPRGYGVWHLAEQWTLKGGVSAGYRAPDLRQSSASWGQATGGGRLDgm 447
Cdd:PRK13486 386 SVFAEDEWHLTDALALTAGSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQLHKGISGVSGQGKTN-- 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 448 IVGNPDLKPEKSLSEEIALLWDNNDSLNAGVTLFNTDFKNKITevrrcNSSADpactigghayDFVSDRVNVDKANMRGV 527
Cdd:PRK13486 464 LLGNPDLKPEESVSYEAGVYYDNPAGLNANVTGFMTDFSNKIV-----SYSIN----------DNTNSYVNSGKARLHGV 528
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 528 ESTFGWKI-TQDVNWTANYTYTESEQKSGQFSGKPLNKMPKHMFNTTLDWQATQDVGFWSRLNFRGK----SSEYLSRTS 602
Cdd:PRK13486 529 EFAGTLPLwSEDVTLSLNYTWTRSEQRDGDNKGAPLSYTPEHMVNAKLNWQITEEVASWLGARYRGKtprfTQNYSSLSA 608
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 603 MSQGT--------PSYTQVDVGLRYNANKNLLVTAGVYNVLDK---------------------QIDYETYDTVLDGRRY 653
Cdd:PRK13486 609 VQKKVydekgeylKAWTVVDAGLSWKMTDALTLNAAVNNLLNKdysdvslysagkstlyagdyfQTGSSTTGYVIPERNY 688
|
....*...
gi 1737286991 654 TVGMTYSF 661
Cdd:PRK13486 689 WMSLNYQF 696
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
47-661 |
1.44e-98 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 315.54 E-value: 1.44e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 47 SISVISKQQIEDKAYRDVTDALKDV--PGVVVTGGGSSSDISIRGMASQYTLFLVNGKRVSTRSTRPNSDNsgieqgWLP 124
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIpgVSVTRGGGGGGSTISIRGFGPDRTLVLVDGLPLASSNYGRGVDL------NTI 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 125 PLESIERIEVIRGPMSSLYGSDAMGGVINIITKKVSNTkaWTGSLHGDATFQENHDSGDifqTNAYASGPL-IDGLLGAK 203
Cdd:cd01347 75 PPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDE--FGGSVTAGYGSDNSGSSGG---GGFDVSGALaDDGAFGAR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 204 VTGLLSRRAEDQILNGF---NEQKMRNGGITLNFTPDEQNDFDLDF----ARELQDRNSTPGKSKATETCRGATCTPNSK 276
Cdd:cd01347 150 LYGAYRDGDGTIDGDGQaddSDEERYNVAGKLDWRPDDDTRLTLDAgyqdQDADGPGGTLPANGTGSSLGGGPSSNTNGD 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 277 SETRYEHTTYSLTHSGYYSDFNTS--------SYIQQEETNNPVRKMRSYN-------------------TTFNNQNQ-- 327
Cdd:cd01347 230 RDWDYRDRYRKRASLGLEHDLNDTgwtlranlSYSYTDNDGDPLILNGGNNaaggdlgrsgysserdttqLGFDAGLNap 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 328 --IFLGDHTLTLGGQYRYEKLRdngnqleaadglnkltRWSWALFAEDEWAMTDSFTATGGLRMDK-------------- 391
Cdd:cd01347 310 fgTGPVAHTLTLGVEYRREELD----------------EKQTALYAQDTIELTDDLTLTLGLRYDHydqdskdtiaggtt 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 392 DQNYGTNWTPRGYGVWHLAEQWTLKGGVSAGYRAPDLRQSSASWGQATGGgrldgmIVGNPDLKPEKSLSEEIALLWDNN 471
Cdd:cd01347 374 AKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTA------AVGNPNLKPEKSKQYELGLKYDPG 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 472 DSLNAGVTLFNTDFKNKITEVRRCNSSADpactigghaydfVSDRVNVDKANMRGVESTFGWKITQDVNWTANYTYTESE 551
Cdd:cd01347 448 DGLTLSAALFRIDIKNEIVSTPTNTGLGL------------VTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTE 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 552 QK--SGQFSGKPLNKMPKHMFNTTLDWQATQD-VGFWSRLNFRGKSSEYLSRTSMSQGTPSYTQVDVGLRYNANKNLLVT 628
Cdd:cd01347 516 VKrtDGATTGNRLPGIPKHTANLGLDYELPDEgLTAGGGVRYRGKQYADTANGNNTVKVPGYTLVDLSASYQFTKNLTLR 595
|
650 660 670 680
....*....|....*....|....*....|....*....|
gi 1737286991 629 AGVYNVLDK-------QIDYETYDTVLDGRRYTVGMTYSF 661
Cdd:cd01347 596 LGVNNLFDKdyytslsVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
4-639 |
2.72e-94 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 306.96 E-value: 2.72e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 4 PRVTLLAVAISAAMLSpLAHAA-------------DPDTVVVTAtgfEQKIQNAPAsISVISKQQIEDKA-YRDVTDALK 69
Cdd:PRK13524 3 KKIHSLALLVNLGIYG-VAQAAeaedaktddtpasHEDTIVVTA---AEQNLQAPG-VSTITAEDIRKRPpANDVSEIIR 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 70 D------VPGVVVTGGGSSSDISIRGMASQYTLFLVNGKRVSTR-STRP----NSDNSGiEQGWLPPlESIERIEVIRGP 138
Cdd:PRK13524 78 TmpgvnlTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVSSRnSVRYgwrgERDTRG-DTNWVPP-EMIERIEVLRGP 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 139 MSSLYGSDAMGGVINIITKKVsnTKAWTGSLHGDATFQENHDSGDIFQTNAYASGPLIDGLlGAKVTGLLSR-RAEDQIL 217
Cdd:PRK13524 156 AAARYGNGAAGGVVNIITKKP--TGEWHGSWNTYFNAPEHKAEGATKRTNFSLSGPLGDEL-SFRLYGNLNKtQADAWDI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 218 N--------------------GFnEQKMRNGGITLNFTPDEQNDFDLDFARelQDrNSTPGKSKATETcrGATCTPNSKS 277
Cdd:PRK13524 233 NqghqsartgsyagtlpagreGV-INKDINGLLRWDFAPLQSLELEAGYSR--QG-NLYAGDTQNTNS--DALVKSLYGK 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 278 ET-RYEHTTYSLTHSGYYSD-FNTSSYIQQEETNN--------------------PVRKMRSYNTTFNNQNQIFLG---D 332
Cdd:PRK13524 307 ETnRMYRQNYALTHRGGWDNgVSTSNYAQYEHTRNsrlpeglaggtegifnekatQFSTIDLDDVMLHSEVNLPFDllvN 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 333 HTLTLGGQYRYEKLRDNGNQLE------AADGLNKLTRWSW------ALFAEDEWAMTDSFTATGGLRMDKDQNYGTNWT 400
Cdd:PRK13524 387 QTLTLGTEWNQQRMKDPSSNTQaltsggAIPGVSATGRSPYskaeifSLFAEDNMELTDSTMLTPGLRFDHHSIVGNNWS 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 401 PRGYGVWHLAEQWTLKGGVSAGYRAPDLRQSS-----ASWGQATGGGRLDG-MIVGNPDLKPEKSLSEEIALLWDNnDSL 474
Cdd:PRK13524 467 PSLNLSQGLGDDFTLKMGIARAYKAPNLYQTNpnyilYSKGQGCYASAGNGcYLQGNDDLKAETSVNKEIGLEFKR-DGW 545
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 475 NAGVTLFNTDFKNKITevrrcnSSADPACTIGGHAYDfVSDRVNVDKANMRGVESTFGWKITQDVNWTANYTYT-ESEQK 553
Cdd:PRK13524 546 LAGLTWFRNDYRNKIE------AGYVPVGTNSVGKTD-IYQWENVPKAVVEGLEGTLNVPVSETVNWTNNLTYMlQSKNK 618
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 554 SgqfSGKPLNKMPKHMFNTTLDWQATQDVGFWSRLNFRG--KSSEYLSRTSMSQGT-----PSYTQVDVGLRYNANKNLL 626
Cdd:PRK13524 619 T---TGDPLSIIPEYTLNSTLSWQATEDLSLQSTFTWYGkqKPKKYNYKGQPVTGSatkevSPYSIVGLSATYDVTKNVS 695
|
730
....*....|...
gi 1737286991 627 VTAGVYNVLDKQI 639
Cdd:PRK13524 696 LTGGVDNLFDKRL 708
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
1-661 |
2.05e-85 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 283.19 E-value: 2.05e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 1 MTIPRVTLLAVAISAAMLSPLAHAA-----DPDTVVVTATGfEQKIQNAPaSISVISKQQIE-DKAYRDVTDALKD---- 70
Cdd:PRK13528 3 MRVNKILWLLTVLLVGLNSPVSAAEssdddNGETMVVEATA-EQELKQQP-GVSIITAEDIKkRPPVNDLSDIIRKmpgv 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 71 --VPGVVVTGGGSSSDISIRGMASQYTLFLVNGKRVSTR-----STRPNSDNSGiEQGWLPPlESIERIEVIRGPMSSLY 143
Cdd:PRK13528 81 nlTGNSASGTRGNNRQIDIRGMGPENTLILIDGVPVTSRnsvrySWRGERDTRG-DTNWVPP-EMVERIEVIRGPAAARY 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 144 GSDAMGGVINIITKKVSNTkaWTGSLHGDATFQENHDSGDIFQTNAYASGPLIDGLLGAKVTGLLSRRAEDQ--ILNGFN 221
Cdd:PRK13528 159 GSGAAGGVVNIITKRPTND--WHGSLSLYTNQPESSKEGATRRANFSLSGPLAGDALTMRLYGNLNKTDADSwdINSSAG 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 222 ----------EQKMRNGGITLNFTPDEQNDFDLDFARElqdrnstpGKSKATETCRGATCT-----PNSKSET-RYEHTT 285
Cdd:PRK13528 237 tknaagregvRNKDINGVLSWKMTPQQILDFEAGYSRQ--------GNIYAGDTQNSNSSAvteslAKSGKETnRLYRQN 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 286 YSLTHSGYYsDFNTSSY-IQQEETNN---------------------PVRKMRSYNTTFN-NQNQIFLGDHTLTLGGQYR 342
Cdd:PRK13528 309 YGLTHNGIW-DWGQSRLgFYYEKTNNtrmneglagggegritadqtfTTSRLESYRTSGElNVPLNWLFEQTLTVGAEWN 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 343 YEKLRD-------------NGNQLEAADGLNKLTRWSWALFAEDEWAMTDSFTATGGLRMDKDQNYGTNWTPRGYGVWHL 409
Cdd:PRK13528 388 RDELNDpsstsltvkdgdiGGISGSAADRSSKNKSEISALYVEDNIEPVPGTNLIPGLRFDYHSEFGSNWSPSLNLSQEL 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 410 AEQWTLKGGVSAGYRAPDLRQSSASW-----------GQATGGGRLdgmiVGNPDLKPEKSLSEEIALLWDnNDSLNAGV 478
Cdd:PRK13528 468 GDYFKVKAGIARAFKAPNLYQSSEGYllysrgngcpkDITSGGCYL----VGNKNLDPEISVNKEIGLEFT-VDDYHASV 542
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 479 TLFNTDFKNKITevrrcnSSADPACTIGGHAYdfVSDRVNVDKANMRGVESTFGWKITQDV-NWTANYTY-TESEQKSgq 556
Cdd:PRK13528 543 TYFRNDYQNKIV------AGDDVIGRTASGAY--ILQWQNGGKAVVEGLEGNLLVPLMKDRlNWNTNATYmITSEQKD-- 612
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 557 fSGKPLNKMPKHMFNTTLDWQATQDVGFWSRLNFRGKS---------SEYLSRTSMSQGTPsYTQVDVGLRYNANKNLLV 627
Cdd:PRK13528 613 -TGNPLSVIPKYTINSTLDWQITQALSANVNWTLYGKQkprthaesrSEETGGLSGKELGA-YSLVGVNVNYDINKNLRL 690
|
730 740 750
....*....|....*....|....*....|....*....
gi 1737286991 628 TAGVYNVLDKQIDYE-----TYDTvlDGRRYTVGMTYSF 661
Cdd:PRK13528 691 NVGVSNLFDKQIYREgeganTYNE--PGRAYYAGVTASF 727
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
28-654 |
2.42e-85 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 280.95 E-value: 2.42e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 28 DTVVVTATGFEQKIQNAPASISVISKQQIEDKAYRDVTDALKDVPG-VVVTGGGSSSDISIRGM--ASQYTLFLVNGKRV 104
Cdd:COG1629 2 EEVVVTATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGvSVTSAGGGAGQISIRGFggGGNRVLVLVDGVPL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 105 strstrpNSDNSGIEQGWLPPLESIERIEVIRGPMSSLYGSDAMGGVINIITKKVSNTKAWTGSLHGdatfqenhDSGDI 184
Cdd:COG1629 82 -------NDPSGGDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASY--------GSYGT 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 185 FQTNAYASGPliDGLLGAKVTGllSRRAEDQILnGFNEQKMRNGGITLNFTPDEQNDFDLDFARELQDRNSTPGKSKATE 264
Cdd:COG1629 147 YRASLSLSGG--NGKLAYRLSA--SYRDSDGYR-DNSDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDSPGYLTLAAL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 265 TCRGATCTPNSKSETRYEHTT-------YSLTHSGYYSDFNTSSYIQQEETNN--------------PVRKMRSYNTTFN 323
Cdd:COG1629 222 RPRGAMDDGTNPYSNDTDDNTrdryslsLEYEHLGDGLKLSASAYYRYDDTDLdsdftptpadggtlEQTDFDNRTYGLE 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 324 NQ---NQIFLGDHTLTLGGQYRYEKLRDNGNQLEAADGLN---------KLTRWSWALFAEDEWAMTDSFTATGGLRMDK 391
Cdd:COG1629 302 LRltyDLGFGGKHTLLVGLDYQRQDLDGSGYPLDLGSGSLptltsgaddDGTTTSLALYAQDTYKLTDKLTLTAGLRYDY 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 392 DQNYG----------------TNWTPRGYGVWHLAEQWTLKGGVSAGYRAPDLRQSSASWgqatgggrLDGMIVGNPDLK 455
Cdd:COG1629 382 VSYDVddtvtgtdsasgsrsySAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYANG--------TDPYSVGNPDLK 453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 456 PEKSLSEEIALLWD-NNDSLNAGVTLFNTDFKNKITEVRRCNSSadpactigghayDFVSDRVNVDKANMRGVESTFGWK 534
Cdd:COG1629 454 PETSTNYELGLRYRlLDGRLSLSLALFYSDVDNEILSVPLPNDS------------GFSTYYTNAGKARSYGVELELSYQ 521
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 535 ITQDVNWTANYTYTESEQKSG-----QFSGKPLNKMPKHMFNTTLDWQATQdvGFWSRLNFRGKSSEYLSRTSMSQGTPS 609
Cdd:COG1629 522 LTPGLSLNASYSYTDAKFDDDtdgsaDLDGNRLPGVPPLTANLGLTYEFPG--GWSLGLGVRYVGDRYLDDANTQGAPGG 599
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 1737286991 610 YTQVDVGLRYNANKNLLVTAGVYNVLDKQIDYETYDTVLDGRRYT 654
Cdd:COG1629 600 YTLVDLGAGYRFGDNLTLSLGVDNLFDKKYATSLSVRASNVRGFL 644
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
12-661 |
6.59e-68 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 234.82 E-value: 6.59e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 12 AISAAMLSPLAHAADP----DTVVVTATGF-EQKIQNAPASISVISKQQIEDKAYRDVTDALKDV---PGVVVTGGGSSS 83
Cdd:COG4772 4 ALAAALLLAAAAAAEAattlETVVVTGSRAaEARLKDVPGSVSVVDREELENQAATSLREVLRRVpgvNVQEEDGFGLRP 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 84 DISIRGMASQYT---LFLVNGkrVSTrSTRPNSDNSGIEQgwlPPLESIERIEVIRGPMSSLYGSDAMGGVINIITKKVS 160
Cdd:COG4772 84 NIGIRGLGPRRSrgiTLLEDG--IPI-APAPYGDPAAYYF---PDLERMERIEVLRGAAALRYGPQTVGGAINFVTRTIP 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 161 NTKAWTGSLHGDatfqenhdSGDIFQTNAYASGPliDGLLGAKVTGLLSRRaedqilNGF---NEQKMRNGGITLNFTPD 237
Cdd:COG4772 158 TAFGGELRVTGG--------SFGYRRTHASVGGT--VGNFGYLVEYSRKRG------DGFrdnSGFDINDFNAKLGYRLS 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 238 EQNDFDLDFARELQDRNsTPG---KSKATETCRGATcTPNSKSETRyeHTTYSLTHS------------GYYSDFNTSSY 302
Cdd:COG4772 222 DRQELTLKFQYYDEDAN-TPGgltDAQFDADPRQSY-RPADQFDTR--RTQLSLRYEhqlsdnttltttAYYNDFSRNWY 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 303 IQQEETN--NPVRKMRSYNTTFNNQN---------QIFLGDHTLTLGGQYRYEK---LRDNGNQLEAADGL-----NKLT 363
Cdd:COG4772 298 IRQNTADpnTPGLGLRGNPRGYRSYGieprlthrfELGGVPHTLEVGLRYHREEedrKQYVNTYGQGRSGAglrrdRRFS 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 364 RWSWALFAEDEWAMTDSFTATGGLR-----MDKDQNYG-------------TNWTPRGYGVWHLAEQWTLKGGVSAGYRA 425
Cdd:COG4772 378 ADALAAYAQNRFELTGRLTLTPGLRyehirRDRTDRYStrtggddsgsnsySEFLPGLGLLYQLTDNLQLYANVSRGFEP 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 426 PDLRQSSASWGqatgggrldgmivGNPDLKPEKSLSEEIALLWDNNDSLNAGVTLFNTDFKNKITEVRRCNSSAdpacti 505
Cdd:COG4772 458 PTFGDLAYGNG-------------GNPDLKPEKSWNYELGTRGRIGNGLSAEVALFYIDYDNELGSCSAAGGDR------ 518
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 506 gghaydfvSDRVNVDKANMRGVESTFGWKI----TQDVNWTANYTYTESEQKSG---QFSGKPLNKMPKHMFNTTLDWQA 578
Cdd:COG4772 519 --------STFTNAGETRHQGLELALDYDLlkggGLGLPLFAAYTYTDAEFTSDfgpVFAGNRLPYVPRHQLTAGLGYEH 590
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 579 TqdvGFWSRLNFRGKSSEY-----LSRTSMSQGTPSYTQVDVGLRYNANKNLLVTAGVYNVLDKQidYET--YDTVLDG- 650
Cdd:COG4772 591 G---GWTANLNGRYVSEQFtdaanTVADGSFGKIPSYTVLDLSASYDFGKNLSLFAGVNNLFDKR--YIAsrAPNYAAGi 665
|
730
....*....|....*.
gi 1737286991 651 -----RRYTVGMTYSF 661
Cdd:COG4772 666 rpgppRTVYAGLRLKF 681
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
28-661 |
2.26e-58 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 208.40 E-value: 2.26e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 28 DTVVVTATGFEQKIQNAPASISVISKQQIEDKAYRDVTDALKDVP--GVVVTGGGSSSDISIRGMASQYTLFLVNGkrvs 105
Cdd:TIGR01785 2 DTVTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPgvDVTGGGRPPGQSINIRGLQDNRVLVVVDG---- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 106 trsTRPNSDNSGIEQG--WLPPlESIERIEVIRGPMSSLYGSDAMGGVINIITKK----VSNTKAWTGSLHGDAtfqenh 179
Cdd:TIGR01785 78 ---ARQNYQRGGAHNGslFVDP-ELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDaadlLRPGQLFGGLAKLSY------ 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 180 DSGDI-FQTNAYASGPLIDGllgakVTGLLS---RRAED-QILNGFN----EQKMRNGGITLNFTPDEQNDFDL-DFARE 249
Cdd:TIGR01785 148 GSNNNsFGGSVAVAGRLDDN-----LDALVAatyRDGGNyRNGNKEEatnsAYVQKNLLAKLGWQLDDAQRLEFsYFTTE 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 250 LQDRNstPGKSKATETCRGATCTPNSKSETRYEHTTYS---LTHSGYYSDFNTSSYIQQEETNNPV----------RKMR 316
Cdd:TIGR01785 223 GSLDE--AQNSGPGTEYVLGSSSTLLASSTRDRSATLTynwTPEDNPWLDATASLYYNRTENDNDRsargvgreegYQYT 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 317 SYNTTFNNQNQIFLGDH-TLTLGGQYRYEKLRDNGNQLEAADGLNKLT----RWSWALFAEDEWAMTDS-FTATGGLRMD 390
Cdd:TIGR01785 301 TYGATLQNTSRFDVASWsTLTYGVDWMKDKRRTESFDPNSVTTIVPNPpsakEYFFGLFLQDNIPLLDDrLTLSAGLRYD 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 391 ----KDQNY---------GTNWTPRGYGVWHLAEQWTLKGGVSAGYRAPDLRQSSASWGQATGGGRLdgMIVGNPDLKPE 457
Cdd:TIGR01785 381 hyklSPKTTadteavdrsYSRWSPSLGLSYKPVDWLTLYASYSQGFRAPSIDELYGTGDHPGTPGGY--TFAPNPNLKPE 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 458 KSLSEEI------ALLWDNNDSLNAGVTLFNTDFKNKI--TEVRRCNSSAdpactigghAYDFVSDRVNVDKANMRGVES 529
Cdd:TIGR01785 459 TSKTWELganlsfDNLLLDNDQLQFKVAYFYNDVKDFIdlTIGVTDNVTA---------GMNNITQYVNIDGARIRGIEA 529
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 530 TFGWKiTQDVNWTANYTYTESEQKSgqfSGKPLNKMPKHMFNTTLDWQATQ-DVGFWSRLNFRGKSSEYLSRTSMSQG-- 606
Cdd:TIGR01785 530 SASYD-AGLWATGLSYGYTIGKDQN---TNQWLSNIPPLKLVVTVGYRFPDrRLDLGAKAAYYERQSESPTTEDVAANgl 605
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 607 --TPSYTQVDVGLRYNAN--KNLLVTAGVYNVLDKQ-IDYETYDTVLDGRRYTVGMTYSF 661
Cdd:TIGR01785 606 ltTPGYTVVDLYATYQPNavKGLTVRFGVNNLTDRKyTPAQSVPGAGPGRNFKGSVKYQF 665
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
37-661 |
1.02e-56 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 203.19 E-value: 1.02e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 37 FEQKIQNAPASISVISKQQIEDKAYRDVTDALKDVP--GVVVTGGGSSSDISIRGMASQYTLFlVNGKRVSTRSTRPnsd 114
Cdd:COG4774 2 TDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPgvTFGAGEGGNGDSFSIRGFSASGDIY-VDGLRDPGQYRRD--- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 115 nsgieqgwlppLESIERIEVIRGPMSSLYGSDAMGGVINIITKKVSNTKawtgSLHGDATFqenhDSGDIFQTNAYASGP 194
Cdd:COG4774 78 -----------TFNLERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEP----FTEVTLTY----GSDGQRRATLDVNGP 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 195 LIDGLlGAKVTGLLsRRAEDQIlngfNEQKMRNGGI--TLNFTPDEQNDFDLDFarELQDRNSTP-------GKSKATET 265
Cdd:COG4774 139 LGDDL-AYRLNGMY-RDSDSYR----DGVDNDRWGIapSLTWRLGDRTRLTLDY--EYQDDDRTPdygvpavANGRPVDV 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 266 CRGA-TCTPNSKSETRYEHTTYSLTH----------SGYYSDFNTSSYIQQEETNNPVRKM-------RSYNTTFNNQNQ 327
Cdd:COG4774 211 DRSTfYGQPDDYSDSETDSATLRLEHdfndnwtlrnALRYSDYDRDYRNTYPTGGNATGTVtrsayrrDQDNDTLSNQTD 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 328 IF----LG--DHTLTLGGQYRYEKLRDNGNQLEAA---------------------DGLNKLTRWSWALFAEDEWAMTDS 380
Cdd:COG4774 291 LTgkfdTGgvKHTLLAGVEYSREDSDNARYSGGGTaptvnlynpvygapvtgptlgGADNDSRTDTTGLYLQDTISLTDR 370
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 381 FTATGGLRMD----KDQNYGTN----------WTPRGYGVWHLAEQWTLkggvsagYrapdlrqssASWGQA-TGGGRLD 445
Cdd:COG4774 371 WSLLAGLRYDrfdtDYTDRTTGattssyddsaFSPRAGLVYKPTPNLSL-------Y---------ASYSTSfNPGGGAP 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 446 GMIVGNPDLKPEKSLSEEIALLWD-NNDSLNAGVTLFNTDFKNKITevrrcnssADPACTigghaydfvSDRVNVDKANM 524
Cdd:COG4774 435 SLSNAGQALDPEKSRQYEVGVKWDlLDGRLSLTAALFRIEKTNVRT--------TDPANP---------GVYVQTGEQRS 497
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 525 RGVESTFGWKITQDVNWTANYTYTESEQK---SGQFSGKPLNKMPKHMFNTTLDWQAT-QDVGFWSRLNFRGKSseYLSR 600
Cdd:COG4774 498 RGVELEATGELTPGWSVLAGYTYLDAEITksaNAANVGNRLPNVPRHSASLWTTYDLPlPGLTLGGGVRYVGSR--YADA 575
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1737286991 601 TSmSQGTPSYTQVDVGLRYNANKNLLVTAGVYNVLDKQ----IDYETYDTVLDGRRYTVGMTYSF 661
Cdd:COG4774 576 AN-TVKLPSYTRFDAGASYRLNKNLTLRLNVNNLTDKRyyasAYGSGYVTPGAPRTVLLSASYRF 639
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
28-661 |
1.69e-52 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 192.63 E-value: 1.69e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 28 DTVVVTATGFEQKIQN----APASISVISKQQIEDKAYRDVTDALKDVP--GVVVTGGGSSSDISIRGMASQYTLFLVNG 101
Cdd:TIGR01786 1 DTITVTATRTADPQRRdlsvTPASVSVISREQLKSQQVRNLRDLLRYEPgvSVVEGGRGGSQGINIRGLDKNRVAVLVDG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 102 KRVSTRSTRPNSDNSGIEQgwLPPlESIERIEVIRGPMSSLYGSDAMGGVINIITKKVS----NTKAWTGSLHGDATFQE 177
Cdd:TIGR01786 81 IRQNTSYGGQGSTFYAINS--IDP-ELIKSIEIVKGASSSLYGSGALGGVVAFRTKDAAdllkPGKDLGGLSKLGYSSAN 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 178 NHDSGDIFqtnAYASGPLIDGLLGAKVTGL--LSRRAEDQILNGFNEQ-------KMRNGGITLN--FTPDEQNDFDLDF 246
Cdd:TIGR01786 158 NRFTQSVA---AAGRNDDVDALVQATYRRGheLKNGNKANIGNESKRSkpnpsdyKSQSFLAKLGwqLNDAHRLGLSLEY 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 247 ARELQDR---NSTPGKSKATETCRGATCTPNSKSETRYEHTT------------------YSLTHSGYYSDFN-TSSYIQ 304
Cdd:TIGR01786 235 TQTDYDEpemTNTSYLTKPLGAPLLSSTVVLGDSKTRDRRTGldyelnpdnswldtvklaLDKQYIQLYNYLNaTSASDY 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 305 QEETNNPVRK----MRSYNTTFNNQNQIFLGDHTLTLGGQYRYEKLRDNGNQLEAAD------GLNKLTRWSWA----LF 370
Cdd:TIGR01786 315 PGVDKNGRYKdkydYYTLGFDTNNKIEFSVHSLSLTYGLDRFKDKVSTGDSRRNLPTaaynlyGYEGENRPVKGsnfgLF 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 371 AEDEWAMTDSFTATGGLRMD-----------KDQNY----GTNWTPRGYGVWHLAEQWTLKGGVSAGYRAPDlrqSSASW 435
Cdd:TIGR01786 395 LQDNIKLGDWLSLSAGLRYDhyktdpkadesKDYGAisktYSRWSPSLGLTYKPTPWLTLYYSYSQGFRAPS---FDELY 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 436 GQATGGGRLDGMIVGNPDLKPEKSLSEEIALLWdNNDSLNAGVTLFNTDFKNKI--TEVRRCNSSADPACTIGGHAYdfv 513
Cdd:TIGR01786 472 GTGAHPGGGPYTFLPNPNLKPETSKNWEIGINL-HFDQLDFKVSYFRNDYKDFIdlGIGVTAKGNMAQVGSNTITNY--- 547
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 514 sdrVNVDKANMRGVE------STFGWKITQDVNWTANYTYTESEQksgQFSGKPLNKMPKHMFNTTLDWQATQDV-GFWS 586
Cdd:TIGR01786 548 ---VNIDNARIRGIElsgrydLGSFFSGPDGWTTTLKYGYTKGKD---SDTNPWLNAITPLKVVLGLGYDHPDEKwGVGL 621
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 587 RLNFRGKSSE---YLSRTSMSQG-------TPSYTQVDVGLRYNANKNLLVTAGVYNVLDKqiDYETYDTVLD------- 649
Cdd:TIGR01786 622 TLTFSGAKDAvdaYATYYENGEAakagplrTPSYTVVDLYGYYKPNKNLTLRFGVYNLLDR--KYTTWESARQagplatg 699
|
730
....*....|....*.
gi 1737286991 650 ----GRRYTVGMTYSF 661
Cdd:TIGR01786 700 ytapGRNYKASVEYKF 715
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
4-661 |
2.99e-51 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 188.95 E-value: 2.99e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 4 PRVTLLAVAISAAMLSPLAHAADP--------DTVVVT----------------ATGFEQKIQNAPASISVISKQQIEDK 59
Cdd:COG4773 1 AAALLAGSGLAAAAAGALAQAAAAaaaeattlPEVTVTgtaegtggytakssstATKLDTPLRETPQSVSVVTRQLIEDQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 60 AYRDVTDALKDVP--GVVVTGGGSSSDISIRGMASQYtlFLVNGKRVSTRSTrpnsdnsgieqgWLPPLESIERIEVIRG 137
Cdd:COG4773 81 GATTLDDALRNVPgvTVSSYDGGGRDSFSIRGFSIDN--YLRDGLPLGGFGG------------GQPDTANLERVEVLKG 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 138 PMSSLYGSDAMGGVINIITKKVsnTKAWTGSLhgDATFqenhDSGDIFQTNAYASGPLI-DGLLGAKVTGLLsRRAEDQI 216
Cdd:COG4773 147 PAGLLYGAGSPGGLVNLVTKRP--TAEPQGEV--SLSA----GSWDTYRATADVGGPLNeDGTLRYRLNAAY-EDGDSFR 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 217 LNGFNEQKMRNGGITLNFTPDEQNDFDLDFARELQ--DRNSTPGKSKATETCRGA-TCTPNSKSETRYEHTTYSLTH--- 290
Cdd:COG4773 218 DGVDNRRTLIAPSLDWDLTDDTTLTLGAEYQDDDStgDRGFLPLDGTLLDLPRSTnLGEPWDYYDTETTTLFAELEHrfn 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 291 -------SGYYSDFNTSSY------IQQEETNNPVRKMRSYNTTFNNQN-QIFL-GD-------HTLTLGGQYRYEKLRD 348
Cdd:COG4773 298 ddwslraNARYSDSDRDGRsayaygAPDAATGTLTRYASARDGDSRSDSlDANLnGKfetggleHTLLVGADYSRYDSDS 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 349 NGNQLEAADGLN----------------KLTRWSWALFAEDEWAMTDSFTATGGLRMDKDQNYGTN-------------W 399
Cdd:COG4773 378 DSATAGTINIYNpvygnlpepdfdasdtDTTTRQTGLYAQDQISLTDRLSLLLGGRYDWYETDSTNrlggsttsyddsaF 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 400 TPRGYGVWHLAEQWTLkggvsagYrapdlrqssASWGQA-TGGGRLDgmIVGNPdLKPEKSLSEEIALLWD-NNDSLNAG 477
Cdd:COG4773 458 TPRAGLVYDLTPGLSL-------Y---------ASYSESfEPQSGAD--NNGNP-LDPETGKQYEAGVKGElFDGRLNAT 518
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 478 VTLFNTDFKNKITevrrcNSSADPACTIGghaydfvsdrvnVDKANMRGVESTFGWKITQDVNWTANYTYTESEQKSGQF 557
Cdd:COG4773 519 LAVFDITQKNVAT-----TDPDNPNFYVQ------------VGEVRSRGVELELSGELTPGLNLIAGYTYTDAKITKDAD 581
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 558 S--GKPLNKMPKHMFNTTLDWQATQdvGFWSRLNFRGkSSEYLSRTSMSQG----TPSYTQVDVGLRYNANKNLLVTAGV 631
Cdd:COG4773 582 AleGKRLTNVPRHTASLWTTYRFPS--GALKGLGLGG-GVRYVGERYGDAAntftLPSYTLVDAGARYDLGKNWTLQLNV 658
|
730 740 750
....*....|....*....|....*....|....
gi 1737286991 632 YNVLDK----QIDYETYDTVLDGRRYTVGMTYSF 661
Cdd:COG4773 659 NNLFDKkyyaSSGSRGYVYYGAPRNVRLSLSYKF 692
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
233-660 |
5.16e-50 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 181.12 E-value: 5.16e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 233 NFTPDEQNDFDLDFARELQDRNSTPGKSKATetcrgatctpnskseTRYEHTTYSLThSGYYSDFNTSSYIQQEETNNPV 312
Cdd:pfam00593 54 DYSDTDRKRLSLGYDYDLGDGLSWLSTLRLG---------------LRYSSLDGDYT-SNSSGLSGAGDYLSDDRLYGLY 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 313 RKMRSYNTTFNNQNQIFLGDHTLTLGGQYRYEKLRDNGNQLEAA---DGLNKLTRWSWALFAEDEWAMTDSFTATGGLRM 389
Cdd:pfam00593 118 GLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDDAYDPYDPANpssSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRY 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 390 DKDQNYGTN--------------WTPRGYGVWHLAEQWTLKGGVSAGYRAPDLRQSSASWGQATGGGRldgmIVGNPDLK 455
Cdd:pfam00593 198 DHYSTDGDDgngggdnfsrsysaFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGGGGGAV----AGGNPDLK 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 456 PEKSLSEEIALLWDNnDSLNAGVTLFNTDFKNKITEVRRCNSSADPACTIgghaydfvsdrVNVDKANMRGVESTFGWKI 535
Cdd:pfam00593 274 PETSDNYELGLKYDD-GRLSLSLALFYIDIKNLITSDPDGPGLGGTVYTY-----------TNVGKARIRGVELELSGRL 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 536 TQDVNWTANYTYTESE-QKSGQFSGKPLNKMPKHMFNTTLDWQatQDVGFWS---RLNFRGKSSEYLSRTSMSQGTPSYT 611
Cdd:pfam00593 342 WGLGLSGGGYTYTDADdDADADDTGNPLPNVPRHTANLGLTYD--FPLGGWGarlGARYVGSGERRYGDAANTFKTPGYT 419
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1737286991 612 QVDVGLRYNANKNLLVTAGVYNVLDKQIDY-------ETYDTVLDGRRYTVGMTYS 660
Cdd:pfam00593 420 LVDLSAGYRLNKNLTLRLGVNNLFDKYYKRyyssgggNLGGYPGPGRTFYLGLSYK 475
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
7-661 |
1.16e-41 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 160.42 E-value: 1.16e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 7 TLLAVAISAAMLSPLAHAADPDTVVVTATGFEQKIQNAPASISVISKQQIEDKAYRDVTDALKDV---PGVVVTGGGSSS 83
Cdd:TIGR01779 8 PALASLLTLCSALHANEAQPLDTVVVTANRFAQTASQTLAPVTIITRQDIERTQAKSLPELLRRLpgvSIAQNGGRGQNT 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 84 DISIRGMASQYTLFLVNGKRVStRSTRPNSDNSGIeqgwlpPLESIERIEVIRGPMSSLYGSDAMGGVINIITKKVSN-- 161
Cdd:TIGR01779 88 SLFLRGTESDHVLVLIDGIRFG-SAAAGAADFQQL------PVELVERIEYVRGPRSSLYGSEAIGGVINIITRRRSGgq 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 162 ----TKAWtGSLH---------------GDATFQENHDSGDIFqtNAYASGPlidGLLGAKVTGLLSRRAEDQILNGFNE 222
Cdd:TIGR01779 161 gttlSAGL-GSLDyqeysiasgvaigenGWYSVALGTESTKGI--NVRPGGP---GVYDPDRDGFRSDSLLLGGGHRFDE 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 223 QKMRNGGItlnFTPDEQNDFDldfarelqdrNSTPGkskatetcrgatcTPNSKSETRYEHTTYSLTHsgYYSDFN---- 298
Cdd:TIGR01779 235 SWSLFVNA---LRYENRNDYD----------NYSFG-------------TRLYKEAEKGDQSFTGGRQ--RQSERDvsel 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 299 TSSYIQQEETNNPVRKMRsYNTTFNN--------QNQIFLGD-HTLTLGGQYRYEKLRDNgnqlEAADGLNKLTRWSWAL 369
Cdd:TIGR01779 287 TLSTGKSKDWDYAYSKGR-YSSTSDTreqrniqwQNDLLVGDgWVLAGGVDWQKDSIISS----TADKEDDRSNTAAFAQ 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 370 FAEdEWAmtdSFTATGGLRMDKDQNYGTNWTPRGYGVWHLAEQWTLKGGVSAGYRAPDLRQssaswgqatgggrLDGMIV 449
Cdd:TIGR01779 362 VLQ-QWG---QQLLEASLRRDDNQQFGSHTTGSIAWGYQFIEELRFTASYGTAFKAPNLNQ-------------LYYPSY 424
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 450 GNPDLKPEKSLSEEIALlwdnnDSLNAGVTLFNTDFKNKITEVRRCNSsadpactiggHAYDFVSdrvNVDKANMRGVES 529
Cdd:TIGR01779 425 GNPNLQPETSKSAELGF-----YGLFSGGKWSISGYRTKINDLIDYDS----------HPKGYPN---NIGEARIKGVEA 486
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 530 TFGWKiTQDVNWTANYTYTESEQKSgqfSGKPLNKMPKHMFNTTLDWqATQDVGFWSRLNFRGKSSEYLSRTSMSQGTP- 608
Cdd:TIGR01779 487 TAEFA-TGGWTHQLSVDLLDAQNVN---TGNTLPRRARQMYKWNADR-AFEQFDWGASYQYVGKRYDDDYNTYPTQNVRl 561
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 1737286991 609 -SYTQVDVGLRYNANKNLLVTAGVYNVLDKqiDYET-YDTVLDGRRYTVGMTYSF 661
Cdd:TIGR01779 562 gGYSLLDLRVSYYVTDSWTVQGRIANLFDK--DYETaYGYPQAGRAYYLSIRYQF 614
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
43-661 |
7.15e-39 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 152.57 E-value: 7.15e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 43 NAPASISVISKQQIEDKAYRDVTDALKDVPGVVVTGGGSSSD---ISIRGMASQYTL--FLVNGKRVSTRSTRPNSDnsg 117
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQfgnITIRGFGLEVDIdnVYLDGVPLLSRGNLAIVD--- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 118 ieqgwlppLESIERIEVIRGPMSSLYGSDAMGGVINIITKKVsntkawTGSLHGDATFQENHDSGdiFQTNAYASGPLI- 196
Cdd:TIGR01783 78 --------PAMVERVEVLRGPASLLYGGSAPGGVINIVTKRP------QDEPKGSVTFGAGTRSG--YRTAFDLGGPLGa 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 197 DGLLGAKVTGLLSRRAEDQILNGFnEQKMRNGGITLNFTPDEQNDFDLDFARElQDRNSTPGKSkatetcRGATCTPNSK 276
Cdd:TIGR01783 142 DGTFRGRLNGARQDGDSFYDGAGE-ETRLGATATDWQLDDRTLLRLGAYYQKE-RDRGGYGGLP------ASGGTSGRDL 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 277 SETRYEHT------------------------TYSLTHSGYYSDFNTSS-------YIQQEET-------NNPVRKMRSY 318
Cdd:TIGR01783 214 SSDRYLGTssnrnyddreylsyglsleyqfndVWTGKQNLRYSYFDTDSnqvqasgYSSDGGLfgrsltvVNVKQDRVQI 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 319 NTTFNNQNQIFLGDHTLTLGGQYRYEKLRDNGNQLEAADGLNKLTRWS------------WAL---------FAEDEWAM 377
Cdd:TIGR01783 294 DAGLDGEFETGPIEHDLLLGVSYGQRTTNRFNNTGYPSDNIYSLTATSsartdigdspkdRALssttkalngVALQRILL 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 378 TDSFTATGGLRMDK-------------DQNYGTNWTPRGYGVWHLAEQWTLKGGVSAGYRAPDLRQSSAswgqatgggrl 444
Cdd:TIGR01783 374 ADKWTLTLGGRYDSvdvksnngvagstGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGA----------- 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 445 dgmIVGNPDLKPEKSLSEEIALLWDNNDSLNAGVTLFNTDFKNKITEvrrcnssadpactigghayDFVSDR--VNVDKA 522
Cdd:TIGR01783 443 ---GNSGDILEPEKGKNYELGVRYDLGDSLLATAALFRITKDNQLVQ-------------------DPVNGTfsVNAGKT 500
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 523 NMRGVESTFGWKITQDVNWTANYTYTESEQK---SGQFSGKPLNKMPKHMFNTTLDWQAtqdVGFWSRLNFRGkSSEYLS 599
Cdd:TIGR01783 501 RNRGVELEARGYLTPGLSLSAGYTYTDAEFTedtNGDTQGNTVPFVPKHTASLWASYAP---PVGDNGLTLGG-GVQYTG 576
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1737286991 600 RTSMSQGT----PSYTQVDVGLRYNA--NKNLLVTAGVYNVLDKQIDYETYDTVLDGRRY-----TVGMTYSF 661
Cdd:TIGR01783 577 KAYVDGGNtgkvPSYTVVDLSVRYDLtkKKNLTLALNVNNLFDRDYYTSGYRWGPSAYIYpgaprTVGLSVSY 649
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
2-661 |
4.65e-35 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 140.90 E-value: 4.65e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 2 TIPRVTLLAvAISAAMLSPLAHAADPDTVVVTATGFEQKIQNAPASISVISKQQIEDKAYRDVTDALKdvpgvvvtgGGS 81
Cdd:PRK10641 1 MIKKASLLT-ALSVTAFSGWAQDTSPDTLVVTANRFQQPVSTVLAPTTVVTRDDIDRWQSKSVNDVLR---------RLP 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 82 SSDIS------------IRGMASQYTLFLVNGKRVSTRSTRPNSDNSGIeqgwlpPLESIERIEVIRGPMSSLYGSDAMG 149
Cdd:PRK10641 71 GVDIAqngglgqlsslfIRGTNSSHVLVLIDGVRLNQAGISGSADLSQI------PISLVQRIEYIRGPRSAVYGSDAIG 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 150 GVINIIT---KKVSNTKAWTGSlHG----DATFQENhdSGDI--------FQT----NAYASGPLI-------DGLLGAK 203
Cdd:PRK10641 145 GVVNIITtrdKPGTTLSAGWGS-NGyqnyDGSTQQQ--LGDNtrvtlagdYTYtkgfDVVAYGNTGtqaqpdrDGFMSKT 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 204 VTGLLSRRAEDQIlNGFneqkMRNGGItlnftpDEQNDFDLDFA--------RELQDRNSTPGkskatetcrgatctpns 275
Cdd:PRK10641 222 LWGGLEHQFNDQW-SGF----VRGYGY------DNRTDYDAYYSpgsplidtRQLYSQSWDAG----------------- 273
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 276 kseTRYEHTTYS---LTHSGYYSDFNTSSYIQQEETNNPVRKMRSYNTTFNNQNQIFLGdhTLTLGGQYRYEKLRDNGNQ 352
Cdd:PRK10641 274 ---LRYNGGIYSsqlIASYSHSKDYNYDPHYGRYDSSATLDDMKQYNVQWGNTVQVGHG--NISAGVDWQKQTTTPGTGY 348
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 353 LEaadglNKLTRWSWALFAEDEWAMtDSFTATGGLRMDKDQNYGTNWTPRGYGVWHLAEQWTLKGGVSAGYRAPDLrqss 432
Cdd:PRK10641 349 VP-----DGYDQRNTGIYLTGQQQI-GDVTLEGAARSDDNSQFGWHGTWQTSAGWEFIDGYRFIASYGTAFKAPNL---- 418
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 433 aswGQATGggrldgmIVGNPDLKPEKSLSEEIALlwdnnDSLNAGVTLFNTDFKNKITEVrrcnssadpactIgghAYDF 512
Cdd:PRK10641 419 ---GQLYG-------FYGNPNLKPEESKQWEGGF-----EGLTGPVNWRLSGYRNDIDNL------------I---DYDD 468
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 513 VSDR-VNVDKANMRGVEstfgwkitqdvnWTANY-TYTESEQKSGQF-------SGKPLNKMPKHMFNTTLDWQATqDVG 583
Cdd:PRK10641 469 HTLKyYNVGKATIKGVE------------WTGNFdTGPLTHQVTLDYvdprnaiTDEPLARRAKQQVKYQLDWQLY-DFD 535
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 584 FWSRLNFRGK--SSEYLSRTSMSQGTPSYTQVDVGLRYNANKNLLVTAGVYNVLDKqiDYET---YDTVldGRRYTVGMT 658
Cdd:PRK10641 536 WGVTYQYLGTryDKDYSTYPYQTVKLGGVSLWDLAVSYPVTSHLTVRGKIANLFDK--DYETvygYQTA--GREYTLSGS 611
|
...
gi 1737286991 659 YSF 661
Cdd:PRK10641 612 YTF 614
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
30-310 |
5.39e-33 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 128.07 E-value: 5.39e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 30 VVVTATGFEQKIQNAPASISVISKQQIEDKAYRDVTDALKDV---PGVVVTGGGSSSDISIRGMASQYTLFLVNGKRVST 106
Cdd:COG4206 1 VVVTATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVpgvQVSSSGGPGSAASISIRGLGSNQTLVLIDGVPLND 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 107 RSTrPNSDNSGIeqgwlpPLESIERIEVIRGPMSSLYGSDAMGGVINIITKKVSNTKAWTGSLhgdatfqeNHDSGDIFQ 186
Cdd:COG4206 81 PSL-GGVDLSLI------PPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSA--------SYGSFGTRR 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 187 TNAYASGPLIDGLLGAKVTGLLSR--RAEDQILNGFNEQKMRNGGITLNFTPDEQNDFDLDFARELQDRNSTPGKSKATE 264
Cdd:COG4206 146 LSASLSGGAGKFSYSLSASYRRSDgyRYNDPDLRNNDGYENTSLNARLGYKLGDNGSLSLSGGYSDSERGYPGAVGSDRN 225
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1737286991 265 TCRGATCTPNSKSETRYEHTTYSLTHSGYYSDFNTSSYIQQEETNN 310
Cdd:COG4206 226 LRLSLSLEYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGAR 271
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
40-151 |
5.29e-25 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 99.65 E-value: 5.29e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 40 KIQNAPASISVISKQQIEDKAYRDVTDALKDVP--GVVVTGGGSSSDISIRGMASQYTLFLVNGKRVstrstrpNSDNSG 117
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPgvSVSSGGGGGGSSISIRGFGSNRVLVLVDGVPL-------NSGGGG 73
|
90 100 110
....*....|....*....|....*....|....
gi 1737286991 118 IEQGWLPPLESIERIEVIRGPMSSLYGSDAMGGV 151
Cdd:pfam07715 74 SVDLNSIDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
392-661 |
1.92e-20 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 96.25 E-value: 1.92e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 392 DQNYgTNWTPRGYGVWHLAEQWTLKGGVSAGYRAPDLRQSSA--SWGQATGGGRLDGMIvGNPDLKPEKSLSEEIALLWD 469
Cdd:TIGR01782 559 DRDY-TDVLPSLNLAYDLTDDLVLRFAASKTITRPDFGDLAAntSLSDDGTGGTVTVSG-GNPDLKPYESDNLDLSLEWY 636
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 470 NNDSLNAGVTLFNTDFKNKITEVRRCNSSADPActiGGHAYDF-VSDRVNVDKA-NMRGVEstFGWKITQD--------V 539
Cdd:TIGR01782 637 FGPGGLLSAAVFYKDIKNFIVTTTSTETNDGGG---GLVVAGVlVSRPVNGGKAgKIRGVE--LGYQQTFDflpgplsgF 711
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 540 NWTANYTYTESEQKSGQFSGK----PLNKMPKHMFNTTLDWQATqdvGFWSRL--NFRgksSEYLSRTSMS------QGT 607
Cdd:TIGR01782 712 GVQANYTYVDSEADPSVDGVQrrklPLPGLSKNTANATLYYEKG---GFSARLsyNYR---SDYLLDVGGSninrldRYV 785
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 608 PSYTQVDVGLRYNANKNLLVTAGVYNVLDKQIDYET------YDTVLDGRRYTVGMTYSF 661
Cdd:TIGR01782 786 DPRGQLDLSASYQVSDHLSLGLQASNLTNEPSRWYTggkqrpREYVETGRTYMLGLRYKF 845
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
5-661 |
3.71e-13 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 72.92 E-value: 3.71e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 5 RVTLLAVAISAAMLSP---LAHAAD-----PDTVVVTATG-------------FEQKIQNAPASISVISKQQIEDKAYRD 63
Cdd:PRK09840 11 QFHSLAFFAGLCIGITpvaQALAAEgqtnaDDTLVVEASTpslyapdqsadpkFSQPLADTTQTITVISEQVIKDQGATN 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 64 VTDALKDV------PGVVVTGGGSSSDISIRGMASQYTLFlVNGKRVSTRSTRpnsDNSGIEQgwlpplesierIEVIRG 137
Cdd:PRK09840 91 LTEALRNVpgvgtfFAGENGNTTTGDAIYMRGFDTSNSIY-VDGIRDIGSISR---DTFNTEQ-----------VEVIKG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 138 PMSSLYGSDAMGGVINIITKKVSNTKAWTGSLH-GDATF-----------------------QENHDSG-DIFQTNAYAS 192
Cdd:PRK09840 156 PSGTDYGRSAPTGSINMISKQPRNDSGIDASASiGSAWFrrgtldvnqvigdttavrlnvmgEKTHDAGrDKVKNERYGV 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 193 GPLIDGLLGAKVTGLLSRRAEDQilngfneQKMRNGGI-TLNF----TPDEQNDFdLDFARELQDRN--STPGKSKATET 265
Cdd:PRK09840 236 APSVAFGLGTANRLYLNYLHVTQ-------NNTPDGGIpTIGLpgysAPSAGRAA-LNHAGKVDTHNfyGTDSDYDDSTT 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 266 CRGAT-----CTPNSK--SETRYEHTTYSLTHSGY-----------YSDFNTSSYIQQEETNNPVRKMRSYNTTFNNQNQ 327
Cdd:PRK09840 308 DTATMrfehdINDNTTlrNTTRWSRVKQDYLLTAImggasnittptPSDVNTWTWSRTANTKDVSNKILTNQTNLTSTFY 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 328 IFLGDHTLTLGGQYRYEKLRD---NGNQLEAADGLN---KLTRWSW--------------ALFAEDEWAMTDSFTATGGL 387
Cdd:PRK09840 388 TGSIGHDVSTGVEFTRETQTNygvNPVTLPAVNLYHpdsSIHPGGLtrnganangqtdtfAIYAFDTLQLTRDWELNGGI 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 388 RMDkdqNYGTNWTPRGYGVWHLAEQWTLKGGVSAG--YRAPDLRQSS--ASWG---------------------QATGGG 442
Cdd:PRK09840 468 RLD---NYHTEYDSATACGGSGRGAITCPAGVAKGspVTTVDTAKSGnlVNWKagalykltengnvyinyavsqQPPGGS 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 443 RLDGMIVG------NPDLKPEKSLSEEIALLWDNNDS-LNAGVTLFNTDFKNKITevrrcnssADPACTIGGHAydfvsd 515
Cdd:PRK09840 545 NFALAQSGsgnsanRTDFKPQKANTSEIGTKWQVLDKrLLLTAALFRTDIENEVE--------QNDDGTYSQYG------ 610
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 516 rvnvdKANMRGVESTFGWKITQDVNWTANYTYTESEQKSGQFSGK----PLNKMPKHMFNTTLDWQATQDVGFWSRLNFR 591
Cdd:PRK09840 611 -----KKRVEGYELSVAGNITPAWQVIAGYTQQKATVKNGKDVAQdgssSLPYTPEHAFTLWSQYQATDDLSVGGGARYI 685
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1737286991 592 GKsseyLSR-TSMSQGTPSYTQ----VDVGLRYNANKNLLVTAGVYNVLDKQidyetYDTVLD--GRRYTVGMTYSF 661
Cdd:PRK09840 686 GS----MHRgSDGAVGTPAFTEgywvADAKLGYRVNRNLDLQLNVYNLFDTD-----YVASINksGYRYHPGEPRTF 753
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
9-244 |
1.07e-08 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 58.23 E-value: 1.07e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 9 LAVAISAAM--LSPLAHAADP---DTVVV-----------------------TATGFEQKIQNAPASISVISKQQIEDKA 60
Cdd:PRK10044 16 IAVVVATAVsgMSVYAQAAVEpkeETITVtaapapqesawgpaatiaakrsaTGTKTDTPIEKTPQSISVVTAEEMALHQ 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 61 YRDVTDALkdvpgvvvtGGGSSSDISIRGMASQYTLFLVNGKRVSTRSTrpNSDNSGIE-QGWLPPLESI-----ERIEV 134
Cdd:PRK10044 96 PKSVKEAL---------SYTPGVSVGTRGASNTYDHLIIRGFAASGQSQ--NNYLDGLKlQGNFYNDAVIdpymlERAEL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 135 IRGPMSSLYGSDAMGGVINIITKKVSntkawTGSLHgDATFQENHDSgdIFQTNAYASGPLID-GLLGAKVTGLlsRRAE 213
Cdd:PRK10044 165 MRGPVSVLYGKSNPGGLLNMVSKRPT-----TEPLK-EVQFKMGTDN--LFQTGFDFSDALDDdGVYSYRLTGL--ARSA 234
|
250 260 270
....*....|....*....|....*....|...
gi 1737286991 214 DQILNGFNEQKMrngGITLNFT--PDEQNDFDL 244
Cdd:PRK10044 235 NAQQKGSEEQRY---AIAPSFTwrPDDKTNFTF 264
|
|
| OMP_b-brl_3 |
pfam14905 |
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB ... |
449-659 |
4.67e-08 |
|
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.
Pssm-ID: 434300 [Multi-domain] Cd Length: 407 Bit Score: 55.74 E-value: 4.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 449 VGNPDLKPEKSLSEEIALLWDNNDSLNAGVTLFNtdfkNKITEVRRcnssADPACTIgghaydFVSDRVNVDKANMRGVE 528
Cdd:pfam14905 207 QGNPNLKPEYTNSFELGYTYKWKLSLSLSYRYTN----DVIQQTFI----TDDNDNV------TYTTYENLGKSNSYGLE 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 529 STFGWKITQDVNWTANYTYTESEQKSGQFSGKPLNKmPKHMFNTTLDWQATQDVGFwsRLNFRgksseYLSRTSMSQGT- 607
Cdd:pfam14905 273 LSASFNPTKWWSLNGNLNGYYNKYKIDGSLNSDFSN-FGFNWNLNNTFTLPKGWSL--QLNGN-----YRSPRVTGQGKi 344
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1737286991 608 PSYTQVDVGLRYN-ANKNLLVTAGVYNVLDKQ----------IDYETYDTVLDGRRYTVGMTY 659
Cdd:pfam14905 345 KPFYSLDLGLSKSfLKKKLTLSLNVNDIFNTRkfrsttnydnGFIQSYNNKWDSRSVRLSLSY 407
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
33-208 |
1.16e-06 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 51.83 E-value: 1.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 33 TATGFEQKIQNAPASISVISKQQIEDKAYRDVTDALkdvpgvvvtGGGSSSDISIRGMASQYTLFLVNGKRVS-TRSTRP 111
Cdd:PRK14049 68 TGAKVDTPFLETPQSISSVTEQQLKDRNPQTLLETL---------AYTPGARVGAFGFDPRFDAFFVRGFDVTyTGVFRD 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 112 NSDNSGIEQGWLPPLE-SIERIEVIRGPMSSLYGSDAMGGVINIITKKVSNTKawtgsLHgdaTFQENHDSGDIFQTNAY 190
Cdd:PRK14049 139 NLRQPGASSSIFKTEPyGLEGVSILRGPSSALYGASGAGGLFNLITKRPTEEP-----LR---EVQVQYGTNNRYQGQFD 210
|
170
....*....|....*....
gi 1737286991 191 ASGPLI-DGLLGAKVTGLL 208
Cdd:PRK14049 211 FSGPVNeTDPVYYRLTGLL 229
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
8-163 |
2.27e-06 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 50.96 E-value: 2.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 8 LLAVAISAAMLSPLAHAADPDTVVV--------------------------TATGF--EQKIQNAPASISVISKQQIEDK 59
Cdd:PRK14050 15 AAGVALAALVLSGLVAAQEGNTTQLetivveggnaasatatgpvdgyvakaTATGSktDTPITEIPQSVSVVGRQEMDDR 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1737286991 60 -AYRDVTDALKDVPGVVVTGGGSSSDIS---IRGM-ASQYTLFLVNGKRVSTrstrpnsdnsGIEQGWLPPLeSIERIEV 134
Cdd:PRK14050 95 gVTNKVDEALRYTPGVLSQPFGTDGDTDwfyIRGFdATQTGVFLDGLNLFSY----------GFGGFQIDPF-MLERVEV 163
|
170 180
....*....|....*....|....*....
gi 1737286991 135 IRGPMSSLYGSDAMGGVINIITKKVSNTK 163
Cdd:PRK14050 164 LKGPASVLYGGSNPGGIVNMVSKRPLDEP 192
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
600-661 |
2.44e-03 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 41.01 E-value: 2.44e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1737286991 600 RTSMSQGtpSYTQVDVGLRYNANKNLLVTAGVYNVLDKqidyeTYDTVLDG-------RRYTVGMTYSF 661
Cdd:PRK10003 668 TFRAEQG--SYALVDLFTRYQVTKNFSVQGNVNNLFDK-----TYDTNVEGsivygapRNFSITATYQF 729
|
|
| |
