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Full Results
penicillin-binding protein AmpH [Enterobacter hormaechei]
Protein Classification
D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH ( domain architecture ID 10013596 )
bifunctional D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH functions in peptidoglycan remodeling or recycling
List of domain hits
Name
Accession
Description
Interval
E-value
PRK10662
PRK10662 beta-lactam binding protein AmpH; Provisional
1-378
0e+00
beta-lactam binding protein AmpH; Provisional
Pssm-ID: 236732 [Multi-domain]
Cd Length: 378
Bit Score: 741.08
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 1 MKR C LL SI AALCA VS L ST A Q AAQP LTA P V LASDI A DRYA NL I Y YGSGATGMALVVIDGNQRVFRS V GETRPGNNVRPQLD 80
Cdd:PRK10662 1 MKR S LL FS AALCA AA L TS A H AAQP AAD P L LASDI V DRYA EH I F YGSGATGMALVVIDGNQRVFRS Y GETRPGNNVRPQLD 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 81 S V IR V ASITKLMTSE M LVKL L D Q G V VKL D DPLSKYAPPGARVPTY Q G T PI R L V NLATHTSALPREQPGGAAHRPVFVWPT 160
Cdd:PRK10662 81 S L IR I ASITKLMTSE V LVKL A D D G T VKL T DPLSKYAPPGARVPTY N G Q PI T L L NLATHTSALPREQPGGAAHRPVFVWPT 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 161 REQRW NY LSTA T LK S APG S QA G YSNLAFDLLADALA T A S GKPY P QL FE E Q ITRPLGMKDTT Y TPSPDQC K RLMV A EKGAS 240
Cdd:PRK10662 161 REQRW KW LSTA K LK A APG T QA A YSNLAFDLLADALA K A A GKPY T QL LR E K ITRPLGMKDTT F TPSPDQC A RLMV G EKGAS 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 241 PCNNTLAAIGSGGVYSTPGDMMRWMQQFLSSD F Y A RS N QADRMQTLIYQRAQL RR VIGMDVPGKADALG M GWVYMAPKDG 320
Cdd:PRK10662 241 PCNNTLAAIGSGGVYSTPGDMMRWMQQFLSSD N Y Q RS Q QADRMQTLIYQRAQL TS VIGMDVPGKADALG L GWVYMAPKDG 320
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1738263700 321 RPGIIQKTGGGGGFITYMAMIPQ S N V G A FVVVTRSP N TRF V NMSDGVN N LV A ELS A NK 378
Cdd:PRK10662 321 RPGIIQKTGGGGGFITYMAMIPQ R N I G V FVVVTRSP L TRF S NMSDGVN D LV T ELS G NK 378
Name
Accession
Description
Interval
E-value
PRK10662
PRK10662 beta-lactam binding protein AmpH; Provisional
1-378
0e+00
beta-lactam binding protein AmpH; Provisional
Pssm-ID: 236732 [Multi-domain]
Cd Length: 378
Bit Score: 741.08
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 1 MKR C LL SI AALCA VS L ST A Q AAQP LTA P V LASDI A DRYA NL I Y YGSGATGMALVVIDGNQRVFRS V GETRPGNNVRPQLD 80
Cdd:PRK10662 1 MKR S LL FS AALCA AA L TS A H AAQP AAD P L LASDI V DRYA EH I F YGSGATGMALVVIDGNQRVFRS Y GETRPGNNVRPQLD 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 81 S V IR V ASITKLMTSE M LVKL L D Q G V VKL D DPLSKYAPPGARVPTY Q G T PI R L V NLATHTSALPREQPGGAAHRPVFVWPT 160
Cdd:PRK10662 81 S L IR I ASITKLMTSE V LVKL A D D G T VKL T DPLSKYAPPGARVPTY N G Q PI T L L NLATHTSALPREQPGGAAHRPVFVWPT 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 161 REQRW NY LSTA T LK S APG S QA G YSNLAFDLLADALA T A S GKPY P QL FE E Q ITRPLGMKDTT Y TPSPDQC K RLMV A EKGAS 240
Cdd:PRK10662 161 REQRW KW LSTA K LK A APG T QA A YSNLAFDLLADALA K A A GKPY T QL LR E K ITRPLGMKDTT F TPSPDQC A RLMV G EKGAS 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 241 PCNNTLAAIGSGGVYSTPGDMMRWMQQFLSSD F Y A RS N QADRMQTLIYQRAQL RR VIGMDVPGKADALG M GWVYMAPKDG 320
Cdd:PRK10662 241 PCNNTLAAIGSGGVYSTPGDMMRWMQQFLSSD N Y Q RS Q QADRMQTLIYQRAQL TS VIGMDVPGKADALG L GWVYMAPKDG 320
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1738263700 321 RPGIIQKTGGGGGFITYMAMIPQ S N V G A FVVVTRSP N TRF V NMSDGVN N LV A ELS A NK 378
Cdd:PRK10662 321 RPGIIQKTGGGGGFITYMAMIPQ R N I G V FVVVTRSP L TRF S NMSDGVN D LV T ELS G NK 378
Beta-lactamase
pfam00144 Beta-lactamase; This family appears to be distantly related to pfam00905 and PF00768 ...
50-361
9.38e-64
Beta-lactamase; This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.
Pssm-ID: 395092 [Multi-domain]
Cd Length: 327
Bit Score: 206.59
E-value: 9.38e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 50 G M A LV V IDGNQR V FRSV G ETRPGNNV RP - QL D SVI R V AS I TK LM T SEMLVK L LDQ G VVK LDDP L SKY A P PG A R vpt YQGT 128
Cdd:pfam00144 16 G V A VA V TRDGKV V VDRG G GVADLEGG RP v TA D TLF R I AS V TK TF T AAAVLQ L VER G KLD LDDP V SKY L P EF A G --- PGKG 92
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 129 P I R L VN L A THTS A LP REQPGGAAHRPVFVW ptr EQRWNY L STATLKSA PG SQA GYSN L A FD LL ADA L ATAS G KP Y PQ L FE 208
Cdd:pfam00144 93 G I T L RD L L THTS G LP PLFAPDDLEEAAADA --- AELVRA L AALPPVWP PG TRW GYSN T A YG LL GEL L ERVT G QS Y EE L LG 169
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 209 EQ I T RPLGM K DT TYTPSPDQCK R LMVAEK G AS P CNNT ---- L A A IGS GG VY ST PG D MM R WMQ qflssdfy A RSNQADRMQ 284
Cdd:pfam00144 170 DR I L RPLGM T DT ELGVPEPGDP R DAAGYT G EG P PVRV ppgp L P A GAY GG LK ST AR D LA R FLL -------- A LLGGLLLSA 241
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1738263700 285 TLIY Q RAQLR R VIGMD V P G KADA LG M GWV YMAPKDGR PG IIQK TGG G G gfi TY M A MI P QSNVGAF V VVT R SPNTRFV 361
Cdd:pfam00144 242 AALA Q LTDWL R GGTTG V G G IRAG LG L GWV LADKTGAG PG LFGH TGG Y G --- TY L A VD P DIGLVVV V LSN R LGPNPDA 315
AmpC
COG1680 CubicO group peptidase, beta-lactamase class C family [Defense mechanisms];
18-358
4.14e-62
CubicO group peptidase, beta-lactamase class C family [Defense mechanisms];
Pssm-ID: 441286 [Multi-domain]
Cd Length: 355
Bit Score: 203.38
E-value: 4.14e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 18 TAQ AA Q P LTAPVLASDIA D RYANLIYYGS G AT G M A LV V IDGNQR V F - RSV G ETRPGNNVRPQL D SVI R V AS I TK LM T SEM 96
Cdd:COG1680 2 KFA AA A P AAGLSADLAAL D AALDAALAEG G IP G A A VA V VRDGKV V Y e KAY G VADLETGRPVTP D TLF R I AS V TK SF T ATA 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 97 LVK L LDQ G VVK LDDP L SKY A P p GARV P TYQGTP I RLVN L A THTS A LP REQ P GGAAHRP V FVWP T REQRWNY L STAT L KSA 176
Cdd:COG1680 82 VLQ L VEE G KLD LDDP V SKY L P - EFKL P DDAKRD I TVRH L L THTS G LP DYE P DPYDAAD V ARPY T PDDLLAR L AALP L LFE 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 177 PG SQAG YSNL AF DLL ADALATAS G K P YPQLFE E Q I TR PLGM K DT TYTPSPDQCK RL MVAEKGASPCNNTL A ---- AI G S G 252
Cdd:COG1680 161 PG TRFS YSNL GY DLL GEIIERVT G Q P LEDYLR E R I FE PLGM T DT GFGLPDAEAA RL APGYEADGEVHDAP A wlga VA G A G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 253 G VY ST PG D MM R WM Q QF L SSDFYAR snqadrm QT L I y QRAQ L RRVIGMD VP GKADAL G M G WVYMAPK DG RP G IIQKT G GGG 332
Cdd:COG1680 241 G LF ST AR D LA R FG Q AL L NGGEWDG ------- KR L L - SPET L AEMTTPQ VP SGDAGG G Y G LGWWLND DG GS G SFGHG G ATP 312
330 340
....*....|....*....|....*.
gi 1738263700 333 GF I T YMAMI P QSNV G AF V VVT R SPNT 358
Cdd:COG1680 313 GF S T FLWVD P ERGL G VV V LTN R DDPG 338
Name
Accession
Description
Interval
E-value
PRK10662
PRK10662 beta-lactam binding protein AmpH; Provisional
1-378
0e+00
beta-lactam binding protein AmpH; Provisional
Pssm-ID: 236732 [Multi-domain]
Cd Length: 378
Bit Score: 741.08
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 1 MKR C LL SI AALCA VS L ST A Q AAQP LTA P V LASDI A DRYA NL I Y YGSGATGMALVVIDGNQRVFRS V GETRPGNNVRPQLD 80
Cdd:PRK10662 1 MKR S LL FS AALCA AA L TS A H AAQP AAD P L LASDI V DRYA EH I F YGSGATGMALVVIDGNQRVFRS Y GETRPGNNVRPQLD 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 81 S V IR V ASITKLMTSE M LVKL L D Q G V VKL D DPLSKYAPPGARVPTY Q G T PI R L V NLATHTSALPREQPGGAAHRPVFVWPT 160
Cdd:PRK10662 81 S L IR I ASITKLMTSE V LVKL A D D G T VKL T DPLSKYAPPGARVPTY N G Q PI T L L NLATHTSALPREQPGGAAHRPVFVWPT 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 161 REQRW NY LSTA T LK S APG S QA G YSNLAFDLLADALA T A S GKPY P QL FE E Q ITRPLGMKDTT Y TPSPDQC K RLMV A EKGAS 240
Cdd:PRK10662 161 REQRW KW LSTA K LK A APG T QA A YSNLAFDLLADALA K A A GKPY T QL LR E K ITRPLGMKDTT F TPSPDQC A RLMV G EKGAS 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 241 PCNNTLAAIGSGGVYSTPGDMMRWMQQFLSSD F Y A RS N QADRMQTLIYQRAQL RR VIGMDVPGKADALG M GWVYMAPKDG 320
Cdd:PRK10662 241 PCNNTLAAIGSGGVYSTPGDMMRWMQQFLSSD N Y Q RS Q QADRMQTLIYQRAQL TS VIGMDVPGKADALG L GWVYMAPKDG 320
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1738263700 321 RPGIIQKTGGGGGFITYMAMIPQ S N V G A FVVVTRSP N TRF V NMSDGVN N LV A ELS A NK 378
Cdd:PRK10662 321 RPGIIQKTGGGGGFITYMAMIPQ R N I G V FVVVTRSP L TRF S NMSDGVN D LV T ELS G NK 378
Beta-lactamase
pfam00144 Beta-lactamase; This family appears to be distantly related to pfam00905 and PF00768 ...
50-361
9.38e-64
Beta-lactamase; This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.
Pssm-ID: 395092 [Multi-domain]
Cd Length: 327
Bit Score: 206.59
E-value: 9.38e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 50 G M A LV V IDGNQR V FRSV G ETRPGNNV RP - QL D SVI R V AS I TK LM T SEMLVK L LDQ G VVK LDDP L SKY A P PG A R vpt YQGT 128
Cdd:pfam00144 16 G V A VA V TRDGKV V VDRG G GVADLEGG RP v TA D TLF R I AS V TK TF T AAAVLQ L VER G KLD LDDP V SKY L P EF A G --- PGKG 92
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 129 P I R L VN L A THTS A LP REQPGGAAHRPVFVW ptr EQRWNY L STATLKSA PG SQA GYSN L A FD LL ADA L ATAS G KP Y PQ L FE 208
Cdd:pfam00144 93 G I T L RD L L THTS G LP PLFAPDDLEEAAADA --- AELVRA L AALPPVWP PG TRW GYSN T A YG LL GEL L ERVT G QS Y EE L LG 169
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 209 EQ I T RPLGM K DT TYTPSPDQCK R LMVAEK G AS P CNNT ---- L A A IGS GG VY ST PG D MM R WMQ qflssdfy A RSNQADRMQ 284
Cdd:pfam00144 170 DR I L RPLGM T DT ELGVPEPGDP R DAAGYT G EG P PVRV ppgp L P A GAY GG LK ST AR D LA R FLL -------- A LLGGLLLSA 241
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1738263700 285 TLIY Q RAQLR R VIGMD V P G KADA LG M GWV YMAPKDGR PG IIQK TGG G G gfi TY M A MI P QSNVGAF V VVT R SPNTRFV 361
Cdd:pfam00144 242 AALA Q LTDWL R GGTTG V G G IRAG LG L GWV LADKTGAG PG LFGH TGG Y G --- TY L A VD P DIGLVVV V LSN R LGPNPDA 315
AmpC
COG1680 CubicO group peptidase, beta-lactamase class C family [Defense mechanisms];
18-358
4.14e-62
CubicO group peptidase, beta-lactamase class C family [Defense mechanisms];
Pssm-ID: 441286 [Multi-domain]
Cd Length: 355
Bit Score: 203.38
E-value: 4.14e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 18 TAQ AA Q P LTAPVLASDIA D RYANLIYYGS G AT G M A LV V IDGNQR V F - RSV G ETRPGNNVRPQL D SVI R V AS I TK LM T SEM 96
Cdd:COG1680 2 KFA AA A P AAGLSADLAAL D AALDAALAEG G IP G A A VA V VRDGKV V Y e KAY G VADLETGRPVTP D TLF R I AS V TK SF T ATA 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 97 LVK L LDQ G VVK LDDP L SKY A P p GARV P TYQGTP I RLVN L A THTS A LP REQ P GGAAHRP V FVWP T REQRWNY L STAT L KSA 176
Cdd:COG1680 82 VLQ L VEE G KLD LDDP V SKY L P - EFKL P DDAKRD I TVRH L L THTS G LP DYE P DPYDAAD V ARPY T PDDLLAR L AALP L LFE 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 177 PG SQAG YSNL AF DLL ADALATAS G K P YPQLFE E Q I TR PLGM K DT TYTPSPDQCK RL MVAEKGASPCNNTL A ---- AI G S G 252
Cdd:COG1680 161 PG TRFS YSNL GY DLL GEIIERVT G Q P LEDYLR E R I FE PLGM T DT GFGLPDAEAA RL APGYEADGEVHDAP A wlga VA G A G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 253 G VY ST PG D MM R WM Q QF L SSDFYAR snqadrm QT L I y QRAQ L RRVIGMD VP GKADAL G M G WVYMAPK DG RP G IIQKT G GGG 332
Cdd:COG1680 241 G LF ST AR D LA R FG Q AL L NGGEWDG ------- KR L L - SPET L AEMTTPQ VP SGDAGG G Y G LGWWLND DG GS G SFGHG G ATP 312
330 340
....*....|....*....|....*.
gi 1738263700 333 GF I T YMAMI P QSNV G AF V VVT R SPNT 358
Cdd:COG1680 313 GF S T FLWVD P ERGL G VV V LTN R DDPG 338
ampC
PRK11289 beta-lactamase/D-alanine carboxypeptidase; Provisional
1-347
4.46e-26
beta-lactamase/D-alanine carboxypeptidase; Provisional
Pssm-ID: 236894
Cd Length: 384
Bit Score: 107.67
E-value: 4.46e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 1 MK RC LL SIA A LCAVSL S TAQA A QPL T APV L A s DI A DR YANLIYYGSGAT GMA L - V VID G NQRV F R - S V GETRP G NN V RP q 78
Cdd:PRK11289 2 MK MM LL LLL A ALLLTA S ASAF A AAA T PQQ L K - DI V DR TITPLMEEQDIP GMA V a V IYN G KPYY F N y G V ADKAT G QP V TQ - 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 79 l D SVIRVA S IT K LM T S e M L VKLLDQ - G VVK L D DP L SKY A P P garvpt YQ G T P --- I R L VN LAT H T SA - LP REQ P GGAA hr 153
Cdd:PRK11289 80 - D TLFELG S VS K TF T A - T L AGYAQA r G ELS L S DP A SKY L P E ------ LK G S P fdg I T L LH LAT Y T AG g LP LQV P DEVK -- 149
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 154 pvfvwp TRE Q RWN Y LSTATLKS APG S Q AG YSN LAFD L LADAL A T A S G K P YP QL F E EQITR PLG MKD T TYTPSPDQCKRL m 233
Cdd:PRK11289 150 ------ DDA Q LLR Y FQAWQPAY APG T Q RL YSN PSIG L FGYLA A K A M G Q P FE QL M E QRLFP PLG LTH T YINVPEAEMADY - 222
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 234 va EK G ASPCNN ------- T L A A i GSG GV Y ST PG DM M R WM Q ----- Q F L SSDF ----- YARSN -- QADR M - Q T L IYQR --- 290
Cdd:PRK11289 223 -- AQ G YNKEGK pvrvnpg V L D A - EAY GV K ST AA DM L R FV Q anlgp Q D L DPTL qqaiq LTQTG yf RVGD M t Q G L GWEM ypy 299
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1738263700 291 - AQ L RRVI --- GMDV --- P GKAD A L gmgwvy MA P KDGRPGI - I Q KTG GGG GF IT Y M A MI P QSNV G 347
Cdd:PRK11289 300 p VS L DTLL agn SNKM ale P QPVT A I ------ TP P QPPVRAV w I N KTG STN GF GA Y V A FV P AKRL G 358
PRK03642
PRK03642 putative periplasmic esterase; Provisional
1-224
1.51e-11
putative periplasmic esterase; Provisional
Pssm-ID: 179620 [Multi-domain]
Cd Length: 432
Bit Score: 65.58
E-value: 1.51e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 1 MKR C LL s IAA L C A V S L S taqa A QPLTA PVL ASDIAD ---------- RYANL I Y -- YGS G AT G MA L VV I DG NQ R V F R SV -- 66
Cdd:PRK03642 1 MKR T LL - YTS L L A F S C S ---- A SAAKY PVL TEASPE kagfnsekln QMDRW I S qq IDA G YP G VN L LI I KD NQ I V Y R KA wg 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 67 ------ G E T RPGNN V RPQLDSVIRV AS I TK L - M T SEM L V KL LDQ G VVKLD D PL SKY A P ----- PG ARV pty Q G - TPI R LV 133
Cdd:PRK03642 76 yakkyd G S T LLAHP V KATTNTMYDL AS N TK M y A T NFA L Q KL VSE G KLDVN D LI SKY I P gfkds PG DKI --- K G k NTL R II 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 134 N L AT H TSAL P RE ---- QPGG A AH rpv FVWPTREQRWNYLSTAT L KSA PGS QAG YS NLAFD LL ADALATAS G K P YPQLF EE 209
Cdd:PRK03642 153 D L LH H SAGF P AD pqyp NKAV A GA --- LYSQDKSTTLEMIKKTP L EYQ PGS KHI YS DVDYM LL GFIVESIT G Q P LDRYV EE 229
250
....*....|....*
gi 1738263700 210 Q I T RPLG MKD T TYT P 224
Cdd:PRK03642 230 S I Y RPLG LTH T VFN P 244
PRK13128
PRK13128 D-aminopeptidase; Reviewed
47-269
9.52e-09
D-aminopeptidase; Reviewed
Pssm-ID: 171868 [Multi-domain]
Cd Length: 518
Bit Score: 56.79
E-value: 9.52e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 47 G AT G MAL VV I DG NQRVFRSV G ETRPGNNVRPQLDSVIRVA S IT K LM T SEM L VKLLDQGVV k LD DP L S kyappg A RVPTYQ 126
Cdd:PRK13128 22 G PG G AVA VV K DG EVVLRHAW G FADLARRKAMTPETRMPIC S VS K QF T CAV L LDCIGEPEM - LD AA L A ------ A YLDQFE 94
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 127 GTPIRLVN L ATHT S A L p R EQPG ----- GAA HRPV F V wpt RE Q RW N Y L S - TA T LKS APG SQAG Y S N LA F DL LAD ALATAS G 200
Cdd:PRK13128 95 DPRPAVRD L CNNQ S G L - R DYWA ltvlc GAA PEGI F L --- PD Q AQ N L L R r LK T THF APG THYS Y C N GN F RI LAD LIEQHT G 170
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1738263700 201 KPYPQ L FE E Q I TR P L GMK DTTYT P S --- P D Q C KRLM - VAEK G AS P CN N TLAAI G SG G VYSTPG DM MR W m Q QF L 269
Cdd:PRK13128 171 RSLAD L LA E R I FA P A GMK TAELI P D tal F D E C TGYE g DTVR G FL P AI N RIHWL G DA G ICASLD DM IA W - E QF I 242
DacC
COG1686 D-alanyl-D-alanine carboxypeptidase [Cell wall/membrane/envelope biogenesis];
1-132
2.81e-04
D-alanyl-D-alanine carboxypeptidase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 441292 [Multi-domain]
Cd Length: 324
Bit Score: 42.52
E-value: 2.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738263700 1 MK RC LL SIAA L CAVSLST A Q AA Q P ltapvlas DIA DRY A N LI YYGS G AT gma L VVIDGNQ R V frsvgetrpgnnvrpqld 80
Cdd:COG1686 1 MK KL LL LALL L LLAAAAA A P AA P P -------- DIA AKS A I LI DADT G QV --- L YEKNADE R L ------------------ 51
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1738263700 81 svi RV AS I TKLMT SEMLVKL L DQ G VVK LDD PL -- S KY A -- PP G ARVPTYQ G TPIRL 132
Cdd:COG1686 52 --- PP AS L TKLMT AYVVLEA L KA G KIS LDD KV tv S EE A ar TG G SKMGLKP G EQVTV 104
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
