NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1738963688|emb|VAT82024|]
View 

phosphatidylserine decarboxylase [Klebsiella pneumoniae]

Protein Classification

phosphatidylserine decarboxylase( domain architecture ID 10011131)

phosphatidylserine decarboxylase catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)

EC:  4.1.1.65
Gene Ontology:  GO:0006646|GO:0004609
SCOP:  4007787

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
psd PRK00044
phosphatidylserine decarboxylase; Reviewed
1-282 0e+00

phosphatidylserine decarboxylase; Reviewed


:

Pssm-ID: 234591  Cd Length: 288  Bit Score: 583.32  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688   1 MLNDLKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKYYKVDMKEAQKPDTAAYRTFNDFFVRPLRDDVRPLNT 80
Cdd:PRK00044    1 MLDRLKILLQYLLPKHLLTRLAGWLASSRAGWLTTAVIRLFIKKYKVDMSEAQKPDPAAYKTFNDFFTRALKDGARPIDE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  81 DPNVLVMPADGVISQLGAIENDKILQAKGHDYSLEALLAGNYQMADLFRNGSFATTYLSPRDYHRVHMPCNGILREMIYV 160
Cdd:PRK00044   81 DPNALVSPADGAISQLGPIEDGQIFQAKGHSYSLEALLGGDAALADPFRNGSFATIYLSPRDYHRVHMPCDGTLREMIYV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688 161 PGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWSGTVTPPREGIIKRWTWPaGDNEGSIA 240
Cdd:PRK00044  161 PGDLFSVNPLTARNVPNLFARNERVVCLFDTEFGPMAQVLVGATIVGSIETVWAGTVTPPREGIIKRWDYP-EAGDGAIT 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1738963688 241 LLKGQEMGRFKLGSTVINLFAPGQVKLVDTLQSLSVTKIGQP 282
Cdd:PRK00044  240 LKKGAEMGRFKLGSTVINLFPPGKVQLAEQLQAGSVVRMGQP 281
 
Name Accession Description Interval E-value
psd PRK00044
phosphatidylserine decarboxylase; Reviewed
1-282 0e+00

phosphatidylserine decarboxylase; Reviewed


Pssm-ID: 234591  Cd Length: 288  Bit Score: 583.32  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688   1 MLNDLKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKYYKVDMKEAQKPDTAAYRTFNDFFVRPLRDDVRPLNT 80
Cdd:PRK00044    1 MLDRLKILLQYLLPKHLLTRLAGWLASSRAGWLTTAVIRLFIKKYKVDMSEAQKPDPAAYKTFNDFFTRALKDGARPIDE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  81 DPNVLVMPADGVISQLGAIENDKILQAKGHDYSLEALLAGNYQMADLFRNGSFATTYLSPRDYHRVHMPCNGILREMIYV 160
Cdd:PRK00044   81 DPNALVSPADGAISQLGPIEDGQIFQAKGHSYSLEALLGGDAALADPFRNGSFATIYLSPRDYHRVHMPCDGTLREMIYV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688 161 PGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWSGTVTPPREGIIKRWTWPaGDNEGSIA 240
Cdd:PRK00044  161 PGDLFSVNPLTARNVPNLFARNERVVCLFDTEFGPMAQVLVGATIVGSIETVWAGTVTPPREGIIKRWDYP-EAGDGAIT 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1738963688 241 LLKGQEMGRFKLGSTVINLFAPGQVKLVDTLQSLSVTKIGQP 282
Cdd:PRK00044  240 LKKGAEMGRFKLGSTVINLFPPGKVQLAEQLQAGSVVRMGQP 281
PS_decarb TIGR00163
phosphatidylserine decarboxylase precursor; Phosphatidylserine decarboxylase is synthesized as ...
49-282 1.22e-132

phosphatidylserine decarboxylase precursor; Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein. A closely related family, possibly also active as phosphatidylserine decarboxylase, falls under model TIGR00164. [Fatty acid and phospholipid metabolism, Biosynthesis]


Pssm-ID: 272936 [Multi-domain]  Cd Length: 238  Bit Score: 376.86  E-value: 1.22e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  49 MKEAQKPDTAAYRTFNDFFVRPLRDDVRPLNTDPNVLVMPADGVISQLGAIENDKILQAKGHDYSLEALLAGNYQMADLF 128
Cdd:TIGR00163   1 LDEAEKPDLADYRSLNEFFIRPLKLERRPVDKEPNALVSPADGVISEVGIINPNQILQVKGMDYSLEELLGEKNPLSPYF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688 129 RNGS-FATTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVG 207
Cdd:TIGR00163  81 RNGGfFVVTYLSPRDYHRFHSPCDCRLRKMRYFPGDLFSVNPLGLQNVPNLFVRNERVILVFDTEFGNMLMIPVGATNVG 160
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1738963688 208 SIETVWSGTVTP-PREGIIKRWTWPAgdnEGSIALLKGQEMGRFKLGSTVINLFAPGQVKLVDTLQSLSVTKIGQP 282
Cdd:TIGR00163 161 SIRTNFDGNIQTnPRHEFTQTWTYNA---LGPVKLLKGEEMGYFELGSTVILLFEADAFQLSAHLAVGQEVKIGEL 233
Psd COG0688
Phosphatidylserine decarboxylase [Lipid transport and metabolism]; Phosphatidylserine ...
14-282 6.04e-113

Phosphatidylserine decarboxylase [Lipid transport and metabolism]; Phosphatidylserine decarboxylase is part of the Pathway/BioSystem: Phospholipid biosynthesis


Pssm-ID: 440452 [Multi-domain]  Cd Length: 243  Bit Score: 326.81  E-value: 6.04e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  14 PKLWLTRLAGWGASKRAGWLTkLVIDLFVKYYKVDMKEAQkpdTAAYRTFNDFFVRPLRDDVRPLNTDPNVLVMPADGVI 93
Cdd:COG0688     1 PKHLLSRLMGPIAREGWPFIA-LLIRTFIKRYGIDLSEAL---PSSYTSFNDFFFRDLKPGARPIPDDPDAVVSPADGKV 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  94 SQLGAIENDKILQAKGHDYSLEALLaGNYQMADLFRNGSFATTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQ 173
Cdd:COG0688    77 SQIGEIEEDRLLQAKGHPYSLEELL-GDSELAEKFEGGTFVSIFLSPFDYHRNHMPVDGTVVEVKYIPGKFLSVNPLALR 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688 174 nvPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWsgtvtppregiikrwtwpagdnEGSIALLKGQEMGRFKLG 253
Cdd:COG0688   156 --PKLFARNERVVIVIETEFGPVAVVQVGALIVRRIVTYV----------------------KEGDTLKKGEEMGLFKFG 211
                         250       260
                  ....*....|....*....|....*....
gi 1738963688 254 STVINLFAPGQVKLvdTLQSLSVTKIGQP 282
Cdd:COG0688   212 STVDLLLPKGAVEI--LVKPGQKVRAGET 238
PS_Dcarbxylase pfam02666
Phosphatidylserine decarboxylase; This is a family of phosphatidylserine decarboxylases, EC:4. ...
63-264 4.69e-76

Phosphatidylserine decarboxylase; This is a family of phosphatidylserine decarboxylases, EC:4.1.1.65. These enzymes catalyze the reaction: Phosphatidyl-L-serine <=> phosphatidylethanolamine + CO2. Phosphatidylserine decarboxylase plays a central role in the biosynthesis of aminophospholipids by converting phosphatidylserine to phosphatidylethanolamine.


Pssm-ID: 396989 [Multi-domain]  Cd Length: 198  Bit Score: 231.40  E-value: 4.69e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  63 FNDFFVRPLRDDVRPLNTDPNVLVMPADGVISQLGAIENDKILQAKGHDYSLEALLAGNyqMADLFRNGSFATTYLSPRD 142
Cdd:pfam02666   1 LNAFFTRFLRDPARPIPAGPGAVVSPADGKISEIGEIEDDSVIQVKGVTYSLRELLGDD--KLDKFKGGTFIVIYLSPFD 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688 143 YHRVHMPCNGILREMIYVPGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETvwsgTVTPPRE 222
Cdd:pfam02666  79 YHRNHAPVDGTVKEVRYIPGKLLPVNPAALKEIPNLFALNERVVLVIETTDGKVAVVQVGALNVGSIVL----TVKPGDE 154
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1738963688 223 giikrwtwpagdnegsiaLLKGQEMGRFKLGSTVINLFAPGQ 264
Cdd:pfam02666 155 ------------------VKKGEELGYFKFGSTVVLLFPKGK 178
 
Name Accession Description Interval E-value
psd PRK00044
phosphatidylserine decarboxylase; Reviewed
1-282 0e+00

phosphatidylserine decarboxylase; Reviewed


Pssm-ID: 234591  Cd Length: 288  Bit Score: 583.32  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688   1 MLNDLKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKYYKVDMKEAQKPDTAAYRTFNDFFVRPLRDDVRPLNT 80
Cdd:PRK00044    1 MLDRLKILLQYLLPKHLLTRLAGWLASSRAGWLTTAVIRLFIKKYKVDMSEAQKPDPAAYKTFNDFFTRALKDGARPIDE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  81 DPNVLVMPADGVISQLGAIENDKILQAKGHDYSLEALLAGNYQMADLFRNGSFATTYLSPRDYHRVHMPCNGILREMIYV 160
Cdd:PRK00044   81 DPNALVSPADGAISQLGPIEDGQIFQAKGHSYSLEALLGGDAALADPFRNGSFATIYLSPRDYHRVHMPCDGTLREMIYV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688 161 PGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWSGTVTPPREGIIKRWTWPaGDNEGSIA 240
Cdd:PRK00044  161 PGDLFSVNPLTARNVPNLFARNERVVCLFDTEFGPMAQVLVGATIVGSIETVWAGTVTPPREGIIKRWDYP-EAGDGAIT 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1738963688 241 LLKGQEMGRFKLGSTVINLFAPGQVKLVDTLQSLSVTKIGQP 282
Cdd:PRK00044  240 LKKGAEMGRFKLGSTVINLFPPGKVQLAEQLQAGSVVRMGQP 281
PS_decarb TIGR00163
phosphatidylserine decarboxylase precursor; Phosphatidylserine decarboxylase is synthesized as ...
49-282 1.22e-132

phosphatidylserine decarboxylase precursor; Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein. A closely related family, possibly also active as phosphatidylserine decarboxylase, falls under model TIGR00164. [Fatty acid and phospholipid metabolism, Biosynthesis]


Pssm-ID: 272936 [Multi-domain]  Cd Length: 238  Bit Score: 376.86  E-value: 1.22e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  49 MKEAQKPDTAAYRTFNDFFVRPLRDDVRPLNTDPNVLVMPADGVISQLGAIENDKILQAKGHDYSLEALLAGNYQMADLF 128
Cdd:TIGR00163   1 LDEAEKPDLADYRSLNEFFIRPLKLERRPVDKEPNALVSPADGVISEVGIINPNQILQVKGMDYSLEELLGEKNPLSPYF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688 129 RNGS-FATTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVG 207
Cdd:TIGR00163  81 RNGGfFVVTYLSPRDYHRFHSPCDCRLRKMRYFPGDLFSVNPLGLQNVPNLFVRNERVILVFDTEFGNMLMIPVGATNVG 160
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1738963688 208 SIETVWSGTVTP-PREGIIKRWTWPAgdnEGSIALLKGQEMGRFKLGSTVINLFAPGQVKLVDTLQSLSVTKIGQP 282
Cdd:TIGR00163 161 SIRTNFDGNIQTnPRHEFTQTWTYNA---LGPVKLLKGEEMGYFELGSTVILLFEADAFQLSAHLAVGQEVKIGEL 233
Psd COG0688
Phosphatidylserine decarboxylase [Lipid transport and metabolism]; Phosphatidylserine ...
14-282 6.04e-113

Phosphatidylserine decarboxylase [Lipid transport and metabolism]; Phosphatidylserine decarboxylase is part of the Pathway/BioSystem: Phospholipid biosynthesis


Pssm-ID: 440452 [Multi-domain]  Cd Length: 243  Bit Score: 326.81  E-value: 6.04e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  14 PKLWLTRLAGWGASKRAGWLTkLVIDLFVKYYKVDMKEAQkpdTAAYRTFNDFFVRPLRDDVRPLNTDPNVLVMPADGVI 93
Cdd:COG0688     1 PKHLLSRLMGPIAREGWPFIA-LLIRTFIKRYGIDLSEAL---PSSYTSFNDFFFRDLKPGARPIPDDPDAVVSPADGKV 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  94 SQLGAIENDKILQAKGHDYSLEALLaGNYQMADLFRNGSFATTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQ 173
Cdd:COG0688    77 SQIGEIEEDRLLQAKGHPYSLEELL-GDSELAEKFEGGTFVSIFLSPFDYHRNHMPVDGTVVEVKYIPGKFLSVNPLALR 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688 174 nvPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWsgtvtppregiikrwtwpagdnEGSIALLKGQEMGRFKLG 253
Cdd:COG0688   156 --PKLFARNERVVIVIETEFGPVAVVQVGALIVRRIVTYV----------------------KEGDTLKKGEEMGLFKFG 211
                         250       260
                  ....*....|....*....|....*....
gi 1738963688 254 STVINLFAPGQVKLvdTLQSLSVTKIGQP 282
Cdd:COG0688   212 STVDLLLPKGAVEI--LVKPGQKVRAGET 238
PRK09629 PRK09629
bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional
1-281 5.34e-98

bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional


Pssm-ID: 104071 [Multi-domain]  Cd Length: 610  Bit Score: 301.27  E-value: 5.34e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688   1 MLNDLKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKYYKVDMKEAQKPDTAAYRTFNDFFVRPLRDDVRPLNT 80
Cdd:PRK09629  324 MKDRLFIISQYLLPHHLLSRLAGCVAECRVRWFKNAFTAWFARRYQVDMSQALVEDLTSYEHFNAFFTRALKADARPLDT 403
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  81 DPNVLVMPADGVISQLGAIENDKILQAKGHDYSLEALLAGNYQMADLFRNGSFATTYLSPRDYHRVHMPCNGILREMIYV 160
Cdd:PRK09629  404 TPGAILSPADGAISQLGPIDHGRIFQAKGHSFSVLELLGGDPKLSAPFMGGEFATVYLSPKDYHRVHMPLAGTLREMVYV 483
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688 161 PGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWSGTVTPPREGiIKRWTWPAGdNEGSIA 240
Cdd:PRK09629  484 PGRIFSVNQTTAENVPELFARNERVVCLFDTERGPMAVVLVGAMIVASVETVWAGLVTPPKRE-LKTFSYDEA-ARAPIH 561
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1738963688 241 LLKGQEMGRFKLGSTVINLFAPGQVKLVDTLQSLSVTKIGQ 281
Cdd:PRK09629  562 LEKGAEMGRFKLGSTAIVLFGPNQVKWAEQLTAGSKVQMGQ 602
PS_Dcarbxylase pfam02666
Phosphatidylserine decarboxylase; This is a family of phosphatidylserine decarboxylases, EC:4. ...
63-264 4.69e-76

Phosphatidylserine decarboxylase; This is a family of phosphatidylserine decarboxylases, EC:4.1.1.65. These enzymes catalyze the reaction: Phosphatidyl-L-serine <=> phosphatidylethanolamine + CO2. Phosphatidylserine decarboxylase plays a central role in the biosynthesis of aminophospholipids by converting phosphatidylserine to phosphatidylethanolamine.


Pssm-ID: 396989 [Multi-domain]  Cd Length: 198  Bit Score: 231.40  E-value: 4.69e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  63 FNDFFVRPLRDDVRPLNTDPNVLVMPADGVISQLGAIENDKILQAKGHDYSLEALLAGNyqMADLFRNGSFATTYLSPRD 142
Cdd:pfam02666   1 LNAFFTRFLRDPARPIPAGPGAVVSPADGKISEIGEIEDDSVIQVKGVTYSLRELLGDD--KLDKFKGGTFIVIYLSPFD 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688 143 YHRVHMPCNGILREMIYVPGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETvwsgTVTPPRE 222
Cdd:pfam02666  79 YHRNHAPVDGTVKEVRYIPGKLLPVNPAALKEIPNLFALNERVVLVIETTDGKVAVVQVGALNVGSIVL----TVKPGDE 154
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1738963688 223 giikrwtwpagdnegsiaLLKGQEMGRFKLGSTVINLFAPGQ 264
Cdd:pfam02666 155 ------------------VKKGEELGYFKFGSTVVLLFPKGK 178
PRK00723 PRK00723
phosphatidylserine decarboxylase; Provisional
6-267 3.18e-58

phosphatidylserine decarboxylase; Provisional


Pssm-ID: 179097 [Multi-domain]  Cd Length: 297  Bit Score: 189.36  E-value: 3.18e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688   6 KLSLQYILPKLWLTRLAGWGASKRagwLTKLVIDLFVKYYKVDMKEAQKPdTAAYRTFNDFFVRPLRDDVRPLNTDPNVL 85
Cdd:PRK00723   33 KNLLELLIKKKIFSKIYGWYCDSR---LSRKKIKPFVNDFNIDMSESEKP-LSDFKSFNDFFTRKLKPEARPIDQGENIL 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  86 VMPADGVISQLGAIENDKILQAKGHDYSLEALLaGNYQMADLFRNGSFATTYLSPRDYHRVHMPCNGILREMIYVPGDLF 165
Cdd:PRK00723  109 ISPGDGRLLAYENIDLNSLFQVKGKTYSLKELL-GDPELAKKYAGGTCLILRLCPTDYHRFHFPDSGICEETRKIKGHYY 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688 166 SVNHLTAQNVPNLFARNERVICLFDTE-FGPMAQILVGATIVGSIETVWSgtvtpPREGIikrwtwpagdnegsialLKG 244
Cdd:PRK00723  188 SVNPIALKKIFELFCENKREWSIFKSEnFGDILYVEVGATCVGSIIQTYK-----PNKKV-----------------KKG 245
                         250       260
                  ....*....|....*....|....
gi 1738963688 245 QEMGRFKL-GSTVINLFAPGQVKL 267
Cdd:PRK00723  246 DEKGYFKFgGSTVILFFEKNKIKI 269
PRK03934 PRK03934
phosphatidylserine decarboxylase; Provisional
32-267 2.24e-53

phosphatidylserine decarboxylase; Provisional


Pssm-ID: 235177 [Multi-domain]  Cd Length: 265  Bit Score: 175.90  E-value: 2.24e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  32 WLTKLVIDLFVKYYKVDMKEAQKPDTaaYRTFNDFFVRPLRDDvRPLNTDPNVLVMPADGVISQLGAIENDKILQAKGHD 111
Cdd:PRK03934   22 FIQKFINASYVKIFKIDMSEFKPPEN--YKSLNALFTRSLKKP-REFDEDPNIFISPCDSLITECGSLEEDKALQIKGME 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688 112 YSLEALLAgnYQMADLFRNGSFATTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQNVPNLFARNERVICLFDT 191
Cdd:PRK03934   99 YSIEELLG--ESNSELVNGFDYINFYLSPKDYHRYHAPCDLEILEARYIPGKLYPVNLPSLEKNKNLFVKNERVVLKCKD 176
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1738963688 192 EFGP-MAQILVGATIVGSIETVWSGTV-TPPREGIIKRWTWpagDNegsIALLKGQEMGRFKLGSTVINLFAPGQVKL 267
Cdd:PRK03934  177 KKGKrLYFVFVGALNVGKMRFNFDERIqTNAKARFIQTYEY---EN---LKLKKGEELGNFEMGSTIVLFSQKGSLEF 248
PRK03140 PRK03140
phosphatidylserine decarboxylase; Provisional
19-281 3.38e-50

phosphatidylserine decarboxylase; Provisional


Pssm-ID: 179544 [Multi-domain]  Cd Length: 259  Bit Score: 167.47  E-value: 3.38e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  19 TRLAGWGASKragwLTKLVIDLFVKYYKVDMKEAQKPdTAAYRTFNDFFVRPLRDDVRPLNTDPNVLVMPADGVISQLGA 98
Cdd:PRK03140   20 YLLRKFAQSR----LSSILIPSYAKVYQINQDEMEKG-LKEYRTLHELFTRKLKEGKRPIDTDASSIVSPVDGVFADVGP 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  99 IENDKILQAKGHDYSLEALLaGNYQMADLFRNGSFATTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQNVPNL 178
Cdd:PRK03140   95 IEDDKTFDVKGKRYSIAEML-GNEERAQRYAGGTYMVLYLSPSHYHRIHSPISGTVTEQFVLGRKSYPVNALGLEYGKRP 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688 179 FARNERVICLFDTEFGPMAQILVGATIVGSIEtvwsgtvtppregiikrWTwpagdNEGsIALLKGQEMGRFKLGSTVIN 258
Cdd:PRK03140  174 LSKNYRSVTEVNSDGEHMALVKVGAMFVNSIE-----------------LT-----HER-DTVQKGEEMAYFSFGSTVVL 230
                         250       260
                  ....*....|....*....|...
gi 1738963688 259 LFAPGQVKLVDTLQSLSVTKIGQ 281
Cdd:PRK03140  231 LFEKDMIEPDQELKSGQEVRLGE 253
PLN02938 PLN02938
phosphatidylserine decarboxylase
4-266 9.27e-35

phosphatidylserine decarboxylase


Pssm-ID: 178526  Cd Length: 428  Bit Score: 131.10  E-value: 9.27e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688   4 DLKLSLQYILPKLWLTRLagWGASKRAG---WLTKLVIDLFVKYYKVDMKEAQKPdTAAYRTFNDFFVRPLRDDVRPLNT 80
Cdd:PLN02938   85 DTKASFLRLLPLRSISRL--WGSLTSVElpvWMRPYVYKAWARAFHSNLEEAALP-LEEYASLREFFVRSLKEGARPIDP 161
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  81 DPNVLVMPADGVISQLGAIEND--KILQAKGHDYSLEALLAGNYQM-----ADLFRNGSFATT----------------- 136
Cdd:PLN02938  162 DPNCLVSPVDGIVLRFGELKGPgtMIEQVKGFSYSVSALLGANSLLpmtaeGKEEKEEETLKDksskswlrvslaspklr 241
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688 137 ----------------YLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQIL 200
Cdd:PLN02938  242 dpvsaspmkglfycviYLGPGDYHRIHSPSDWNIEVRRHFSGRLFPVNERATRTIRNLYVENERVVLEGEWQEGFMAMAA 321
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1738963688 201 VGATIVGSIE--------TVWSGTVTPPREGIIKRWTWPagDNEGsIALLKGQEMGRFKLGSTVINLF-APGQVK 266
Cdd:PLN02938  322 VGATNIGSIElfiepelrTNRPKKKIFNSEPPEERVYEP--EGCG-LCLKKGDEVAVFNLGSTVVLVFeAPVEVE 393
PLN02964 PLN02964
phosphatidylserine decarboxylase
38-267 3.91e-32

phosphatidylserine decarboxylase


Pssm-ID: 215520 [Multi-domain]  Cd Length: 644  Bit Score: 126.13  E-value: 3.91e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  38 IDLFVKYYK--VDMKEAQKPdTAAYRTFNDFFVRPLRDDVRPLNTDPN--VLVMPADGVISQLGAIENDKILQAKGHDYS 113
Cdd:PLN02964  390 IPKFLEFFKdqINMDEVKYP-LEHFKTFNEFFIRELKPGARPIACMDNddVAVCAADCRLMAFQSVDDSTRFWIKGRKFS 468
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688 114 LEALLaGNYQMADLFRNGSFATTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLtAQNVP--NLFARNERVICLFDT 191
Cdd:PLN02964  469 IKGLL-GKKVHSDAFLDGSLVIFRLAPQDYHRFHVPVSGVIEKFVDVPGSLYTVNPI-AVNSKycNVFTENKRAVCIIST 546
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1738963688 192 -EFGPMAQILVGATIVGSIEtvwsgtvtppregiikrWTWPAGDNegsiaLLKGQEMGRFKLG-STVINLFAPGQVKL 267
Cdd:PLN02964  547 aEFGKVAFVAIGATMVGSIT-----------------FVKKEGDH-----VKKGDELGYFSFGgSTVICVFEKDAIDI 602
PTZ00403 PTZ00403
phosphatidylserine decarboxylase; Provisional
36-260 5.34e-25

phosphatidylserine decarboxylase; Provisional


Pssm-ID: 173594  Cd Length: 353  Bit Score: 103.01  E-value: 5.34e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688  36 LVIDLFVKYYKVDMKEAQKPdTAAYRTFNDFFVRPLRDDVRPL-NTDPNVLVMPADGVISQLGAIENDKILQAKGHDYSL 114
Cdd:PTZ00403   84 PIYNFLIKYMGINKEEIKYP-IESYKSIGDFFSRYIREETRPIgDVSDYSIVSPCDSELTDYGELSSEYLENVKGVKFNV 162
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1738963688 115 EALLAGNYQmaDLFRNGS----FATTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQNVPNLFARNERVICLFD 190
Cdd:PTZ00403  163 NTFLGSDMQ--KKYNDGStkffYAIFYLSPKKYHHFHAPFNFKYKIRRHISGELFPVFQGMFKIINNLFNINERVILSGE 240
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1738963688 191 TEFGPMAQILVGATIVGSIETVWSGTVTPPREGIIKRWTwpAGDNEGSI-----ALLKGQEMGRFKLGSTVINLF 260
Cdd:PTZ00403  241 WKGGNVYYAAISAYNVGNIKIINDEELVTNNLRTQLSYM--GGDINTKIydsykSVEVGDEVGEFRMGSSIVVIF 313
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH