|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
1-598 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 1148.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 1 MNLFSTLMMLSLIILTLPIMSAT----NNHSYPQYAKTMIFYSFMASLPPTIMFTQSGQEMMISNWYWMTIQTMKLSLSF 76
Cdd:MTH00108 1 MNLFTSSTLLTLLILTLPIIMTLtnpyKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 77 KLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYG 156
Cdd:MTH00108 81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 157 RADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIFMLNLNNTTLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 236
Cdd:MTH00108 161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 237 TPVSALLHSSTMVVAGIFLLIRFYPLVENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 316
Cdd:MTH00108 241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 317 QPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETAN 396
Cdd:MTH00108 321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 397 TSYTNAWALLITLIATSLTAVYSTRIIFFALLGKPRFPSLILINENNPLLTNPITRLLIGSIFAGFLISNNITPSTVPQM 476
Cdd:MTH00108 401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 477 TMPLYIKLTALFVTLAGFAMALELSYMTQSLKYKHPSTMFKFSTMLGYFPLTMHRLSPLTSLTMSQKSATMLLDLIWLEN 556
Cdd:MTH00108 481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 2413964610 557 TLPKLISKIQQNTSVMVSNQKGLIKLYFLSFLITMVLALIIF 598
Cdd:MTH00108 561 ILPKTISLIQMKASTTISNQKGLIKLYFLSFLITLTLSLLLF 602
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
3-600 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 928.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 3 LFSTLMMLSLIILTLPIMSATNNHSYPQ-----YAKTMIFYSFMASLPPTIMFTQSGQEMMISNWYWMTIQTMKLSLSFK 77
Cdd:MTH00137 6 IMTSSLILIFALLIYPLLTTLSPNPQKPnwaltHVKTAVKTAFFVSLLPLFLFLNQGAETIITNWNWMNTLTFDINISFK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 78 LDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGR 157
Cdd:MTH00137 86 FDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGR 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 158 ADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIFMLNLN-NTTLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 236
Cdd:MTH00137 166 ADANTAALQAVIYNRVGDIGLILAMAWMATNLNSWEIQQIFALSKDfDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGP 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 237 TPVSALLHSSTMVVAGIFLLIRFYPLVENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 316
Cdd:MTH00137 246 TPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLN 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 317 QPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETAN 396
Cdd:MTH00137 326 QPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALN 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 397 TSYTNAWALLITLIATSLTAVYSTRIIFFALLGKPRFPSLILINENNPLLTNPITRLLIGSIFAGFLISNNITPSTVPQM 476
Cdd:MTH00137 406 TSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPLKTPVM 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 477 TMPLYIKLTALFVTLAGFAMALELSYMT-QSLKYKHPSTMFKFSTMLGYFPLTMHRLSPLTSLTMSQKSATMLLDLIWLE 555
Cdd:MTH00137 486 TMPPLLKLAALIVTILGLLIALELASLTnKQFKPTPTLPPHHFSNMLGFFPAIIHRLTPKLNLTLGQTIATQMVDQTWLE 565
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 2413964610 556 NTLPKLISKIQQNTSVMVSN-QKGLIKLYFLSFLITMVLALIIFNF 600
Cdd:MTH00137 566 KTGPKGIASLQLPLITTTSNiQQGMIKTYLTLFLLTLALATLLLLL 611
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
3-598 |
0e+00 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 895.68 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 3 LFSTLMMLSLIILTLPIMSAT---NNHSYPQYAKTMIFYSFMASLPPTIMFTQSGQEMMISNWYWMTIQTMKLSLSFKLD 79
Cdd:MTH00004 4 LLNTTTLLTLLILLTPILLPLlskNLKNSPTTIKTTVKLAFLISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISFKLD 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 80 FFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRAD 159
Cdd:MTH00004 84 QYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAE 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 160 ANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIFMLNlNNTTLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPV 239
Cdd:MTH00004 164 ANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFSPT-QTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 240 SALLHSSTMVVAGIFLLIRFYPLVENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPH 319
Cdd:MTH00004 243 SALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQ 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 320 LAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSY 399
Cdd:MTH00004 323 LAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSY 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 400 TNAWALLITLIATSLTAVYSTRIIFFALLGKPRFPSLILINENNPLLTNPITRLLIGSIFAGFLISNNITPSTVPQMTMP 479
Cdd:MTH00004 403 LNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTKTPPMTMP 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 480 LYIKLTALFVTLAGFAMALELSYMTQSLKYKHPSTMFKFSTMLGYFPLTMHRLSPLTSLTMSQKSATMLLDLIWLENTLP 559
Cdd:MTH00004 483 TTTKLAALIVTILGILLALELSNMTTTLTPPKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKMGP 562
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 2413964610 560 KLISKIQQNTSVMVSN-QKGLIKLYFLSFLITMVLALIIF 598
Cdd:MTH00004 563 KGLANLQLTASKTLTTlQKGLIKNYLTSFALTILLLLLLT 602
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-598 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 846.11 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 1 MNL---FSTLMMLSLIILTLPIMSaTNNHSYPQYAKTMIFYSFMASLPPTIMFTQSGQEMMISNWYWMTIQTMKLSLSFK 77
Cdd:MTH00066 1 MNLmliFNSSMILSLLLLILPLLL-PKSNNFHTNVKTSVKTAFFISLIPLMIFINQGLESITTSFHWMNIFNFNINSSFK 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 78 LDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGR 157
Cdd:MTH00066 80 FDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHAR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 158 ADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIFMLNlNNTTLPLMGLLLAATGKSAQFGLHPWLPSAMEGPT 237
Cdd:MTH00066 160 ADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLN-DNSTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPT 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 238 PVSALLHSSTMVVAGIFLLIRFYPLVENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQ 317
Cdd:MTH00066 239 PVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQ 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 318 PHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANT 397
Cdd:MTH00066 319 PQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNT 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 398 SYTNAWALLITLIATSLTAVYSTRIIFFALLGKPRFPSLILINENNPLLTNPITRLLIGSIFAGFLISNNITPSTVPQMT 477
Cdd:MTH00066 399 SNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILT 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 478 MPLYIKLTALFVTLAGFAMALELSYMTQSLKYKhpSTMFKFSTMLGYFPLTMHRLSPLTSLTMSQKSATMLLDLIWLENT 557
Cdd:MTH00066 479 MPTFMKLAALLVTLLGLLIALDLAKITSKTTPK--TKMHSFSNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMTWYEKS 556
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 2413964610 558 LPKLISKIQ-QNTSVMVSNQKGLIKLYFLSFLITMVLALIIF 598
Cdd:MTH00066 557 GPKGLTNQQlPPIKTITNIQTGLIKTYLTLFLITLLLMLILL 598
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-600 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 684.37 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 1 MNLFSTLMMLSLIILTLPIMSATNNHSypQYAKTMIFYSFMASLPPTIMFTQSGQEMMISNWYWMTIQTMKLSLSFKLDF 80
Cdd:MTH00211 2 NTIFNSGFLLILILLLLPLLLPLNNSK--LHIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 81 FSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADA 160
Cdd:MTH00211 80 YSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 161 NTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIFMLNlNNTTLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVS 240
Cdd:MTH00211 160 NTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFILN-LDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVS 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 241 ALLHSSTMVVAGIFLLIRFYPLVENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHL 320
Cdd:MTH00211 239 ALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQL 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 321 AFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYT 400
Cdd:MTH00211 319 AFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYL 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 401 NAWALLITLIATSLTAVYSTRIIFFALLGKPRFPSLILINENNPLLTNPITRLLIGSIFAGFLISNNITPSTVPQMTMPL 480
Cdd:MTH00211 399 NAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILSLPF 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 481 YIKLTALFVTLAGFAMALELSYMTqslKYKHPSTMFKFSTMLGYFPLTMHRLSPLTSLTMSQKSATMLLDLIWLENTLPK 560
Cdd:MTH00211 479 LLKLMPLLVTIVGLLLGLELVNLT---HKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEKLGPK 555
|
570 580 590 600
....*....|....*....|....*....|....*....|.
gi 2413964610 561 LISKIQQNTSVMVSN-QKGLIKLYFLSFLITMVLALIIFNF 600
Cdd:MTH00211 556 GLGVNQKKLIKLVTSpQQGLIKSYLALLLLSLLLILLLFLL 596
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
39-598 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 574.23 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 39 SFMASLPPTIMFTQSGQEMMISNWYWMTIQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLL 118
Cdd:MTH00208 66 AFLSLINLLIWILLGCPNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLI 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 119 MFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIF 198
Cdd:MTH00208 146 IFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEIL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 199 MLNLNNTTLP---LMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMIQTLALC 275
Cdd:MTH00208 226 SLNNSNSFLInilLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 276 LGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKM 355
Cdd:MTH00208 306 LGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKM 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 356 GGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATSLTAVYSTRIIFFALLGKPRFPS 435
Cdd:MTH00208 386 GGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSP 465
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 436 LILINENNPLLTNPITRLLIGSIFAGFLISNNITPStvPQMTMPLYIKLTALFVTLAGFAMALELsYMTQSLKYKhPSTM 515
Cdd:MTH00208 466 LSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNL--PPLTLPLILKSLPLIVTIIGAAFSFSF-LLSLSSNPI-NSNF 541
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 516 FKFSTMLGYFPLTMHRLSPLTSLTMSQKSATMLLDLIWLENTLP-------KLISKIQQNTsvmvsnQKGLIKLYFLSFL 588
Cdd:MTH00208 542 FSFLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPqgigntsSTLSKSYQLT------QTGYIKQYLLSST 615
|
570
....*....|
gi 2413964610 589 ITMVLALIIF 598
Cdd:MTH00208 616 LLFLLILTLS 625
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
35-597 |
5.76e-144 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 429.96 E-value: 5.76e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 35 MIFYSFMASLppTIMFTQSGQEMMISNWYWMTIQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFF 114
Cdd:COG1009 37 APLAAFVLSL--LLFPAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 115 KYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWEL 194
Cdd:COG1009 115 AYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNF 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 195 QQIF---MLNLNNTTLPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMI 269
Cdd:COG1009 195 SELLaaaPTILSSPLLTLILLLLllGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVW 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 270 QTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGdE 349
Cdd:COG1009 275 LTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG-T 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 350 QDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATS-LTAVYSTRIIFFALL 428
Cdd:COG1009 354 RDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGAfLTAFYSFRLFFLVFF 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 429 GKPRFPSLILINENNPLLTNPITRLLIGSIFAGFLISNN----ITPSTVPQMTMPLY----IKLTALFVTLAGFAMALEL 500
Cdd:COG1009 434 GKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLleglLAPAAVLGGELHLAhgllLNALPLLLSLLGIALGYLL 513
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 501 sYMTQSLK--YKHPSTMFKFSTMLGYFPLTMHRLSPLTSLTMSQKSATMLLDLIWLENTLPKLISKIqqnTSVMVSNQKG 578
Cdd:COG1009 514 -YLKRPLPalAERLKPLYRLLANKWYFDELYDALFVKPVRALARFLWFDRYVIDGIVNGLARLTLFS---GRLLRRLQTG 589
|
570
....*....|....*....
gi 2413964610 579 LIKLYFLSFLITMVLALII 597
Cdd:COG1009 590 YLQFYALTILLGVVVLLLL 608
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
35-497 |
5.73e-139 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 417.64 E-value: 5.73e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 35 MIFYSFMASLPPTI-MFTQSGQEMMISNWYWMTIQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRF 113
Cdd:PRK06590 38 LVGLSALLSLVVFFdFLLGGGRAFSQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRF 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 114 FKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWE 193
Cdd:PRK06590 118 FAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLN 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 194 LQQIF-----MLNLNNTTLPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENN 266
Cdd:PRK06590 198 YDEVFaaapqFFGLGWSALTLICLLLfiGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELS 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 267 KMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSL 346
Cdd:PRK06590 278 PEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 347 GDEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYtNAWALLITLIATSLTAVYSTRIIFFA 426
Cdd:PRK06590 358 HHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANG-HINLFVAGLVGAFLTAFYSFRLIFLV 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 427 LLGKPRfPSLILINENNPLLTNPITRLLIGSIFAGFLISNNIT---------PSTVPQMTMPLYIKLTALFVTLAGFAMA 497
Cdd:PRK06590 437 FHGKEK-EKIHHPHESPAVMTLPLIVLAVLSVFAGALIVPPFLgvlplttelAHGEAEHHLPVWVALLPLVVALAGIALA 515
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
36-518 |
9.30e-132 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 398.58 E-value: 9.30e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 36 IFYSFMASLPPTIMFTQSGQEMMISN--WYWMTIQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRF 113
Cdd:TIGR01974 37 VGLSAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRF 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 114 FKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWE 193
Cdd:TIGR01974 117 FAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLN 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 194 LQQIFML--NLNNTTLPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMI 269
Cdd:TIGR01974 197 FQEVFALapGAFFSALTLICLLLfiGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 270 QTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDE 349
Cdd:TIGR01974 277 LYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHE 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 350 QDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATSLTAVYSTRIIFFALLG 429
Cdd:TIGR01974 357 QDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHG 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 430 KPRFPSLILINENNPLLTNPITRLLIGSIFAGFLISNNITP--STVPQMT--------MPLYIKLTALFVTLAGFAMALE 499
Cdd:TIGR01974 437 KERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFlkGVLPTSAepalehhhVPALEIWSPTAVAILGILLAYL 516
|
490
....*....|....*....
gi 2413964610 500 LSYMTQSLKYKHPSTMFKF 518
Cdd:TIGR01974 517 LYLGNPTLPAKIAQRHSGL 535
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
62-500 |
2.20e-120 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 369.41 E-value: 2.20e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 62 WYWMTIQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWE 141
Cdd:MTH00020 62 WRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 142 GVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIF----MLNLNNTTLPLMGLLLAAT 217
Cdd:MTH00020 142 GVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFnmvvSAPSSDITLICLFLFIGAV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 218 GKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMIQTLALCLGAITTLFTAICALTQNDIKKI 297
Cdd:MTH00020 222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKV 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 298 VAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLFKSLPFTTTALIIGSLALT 377
Cdd:MTH00020 302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLM 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 378 GMPFLTGFYSKDLIIETANTSYTNAWALLITLIATSLTAVYSTRIIFFALLGKP--RFPSLILINENNPLLTNPITRLLI 455
Cdd:MTH00020 382 GFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTnlKKAVFFHLHEGDWNLLLPLGILAL 461
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 2413964610 456 GSIFAGFLISNNI-TPSTVPQMTMPLYIKLTALFVTLAGFAMALEL 500
Cdd:MTH00020 462 GSIFVGYLAKEMIwSFQITLPPIVPLSIKLLPVFLSLGGIGLVIIL 507
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
35-600 |
1.50e-119 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 365.70 E-value: 1.50e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 35 MIFYSFMASLPPTIMFTQSGQEMMISNWYWMTIQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFF 114
Cdd:MTH00151 9 FLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFM 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 115 KYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDiGFILSMAWFMVNSNSWEL 194
Cdd:MTH00151 89 WLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALV-IYYQNKKSLSAGMLTALTNRIGD-VLILLSIALLVLLGHWSI 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 195 qqIFMLNLNNTTLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMIQTLAL 274
Cdd:MTH00151 167 --LSMWDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 275 CLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRK 354
Cdd:MTH00151 245 FISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRL 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 355 MGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATSLTAVYSTRIIFFALLGKPRFP 434
Cdd:MTH00151 325 LGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSS 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 435 SLILINENNPLLTNPITRLLIGSIFAGFLISnNITPSTVPQMTMPLYIKLTALFVTLAGFAMALELSYMTQSLKYKHPST 514
Cdd:MTH00151 405 SLSSKSDEDFYVSLPMLLLSLGALIGGKLLQ-SLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVKLS 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 515 MFkFSTMLGYFPLTMHrlsPLTSLTMSQKSATML-LDLIWLENTLPKLISKIqqNTSVMVSNQKGLIKLYFLSFLITMVL 593
Cdd:MTH00151 484 FF-FSSMWFLSPLSSQ---PLKSLSLKLSNSSMKsLDMGWLEILGGQGVFKA--NKSFSVLNESWPVKWFNFFIGLILLL 557
|
....*..
gi 2413964610 594 ALIIFNF 600
Cdd:MTH00151 558 VLFLVVI 564
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
62-600 |
9.11e-118 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 362.79 E-value: 9.11e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 62 WYWMTIQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWE 141
Cdd:MTH00210 62 WRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 142 GVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIFML-----NLNNTTLPLMGLLLAA 216
Cdd:MTH00210 142 GVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLlvtniNKESLTIICLLLFIGA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 217 TGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMIQTLALCLGAITTLFTAICALTQNDIKK 296
Cdd:MTH00210 222 VGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKK 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 297 IVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLFKSLPFTTTALIIGSLAL 376
Cdd:MTH00210 302 VIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSL 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 377 TGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATSLTAVYSTRIIFFALLGKPRFPSLILIN--ENNPLLTNPITRLL 454
Cdd:MTH00210 382 MGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGvhESSWNITFPLLLLA 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 455 IGSIFAGFLiSNNITPSTVPQMTMPLYIKLTALFVTLAGFAMALELSYMTQSLKYKHPSTMFKFSTMLGY--------FP 526
Cdd:MTH00210 462 FGSIFVGYL-GKEVVLSNVIPPIVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISRRGVSIRLYHVIYtflnsawqFN 540
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2413964610 527 LTMHRLSPLTSLTMSQKSATMLLDLIWLENTLPKLISKIQQNTSVMVSN-QKGLIKLYFLSFLITMVLALIIFNF 600
Cdd:MTH00210 541 YVINHFIVKNIWKFGHLITYRIIDRGLLEIIGPRGISKVLIKLTQKISNlQSGMVFNYALIMIIFTTLFISGAGI 615
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
57-599 |
1.15e-111 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 345.59 E-value: 1.15e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 57 MMISNWYWMTIQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQL 136
Cdd:MTH00165 31 SLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISI 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 137 FIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDIGFILSMAWFMvNSNSWELQQIFMLNLNNTTLPLMGLL--L 214
Cdd:MTH00165 111 LLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMM-NFGSWNFIFYLDFMKNSFEMLLIGLLimL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 215 AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMIQTLaLCLGAITTLFTAICALTQNDI 294
Cdd:MTH00165 189 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFFSKFL-LLISLLTMFMAGLGANFEFDL 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 295 KKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLFKSLPFTTTALIIGSL 374
Cdd:MTH00165 268 KKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNL 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 375 ALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATSLTAVYSTRIIFFALLGKPRFPSLILINENNPLLTNPITRLL 454
Cdd:MTH00165 348 SLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLL 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 455 IGSIFAGFLISNNITPsTVPQMTMPLYIKLTALFVTLAGFAMALELSYMT--QSLKYKHPSTMFKFSTMLGYFPLTMHRL 532
Cdd:MTH00165 428 FMSIFGGSMLSWLIFP-EPYMICLPFYLKLLTLFVILLGGWLGYELSLMSlsYNLKSLKNYKLSSFLGSMWFMPFLSTYG 506
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2413964610 533 SPLTSLTMSQKSaTMLLDLIWLENTLPKLISKIQQNTSVMVSN-QKGLIKLYFLSFLITMVLALIIFN 599
Cdd:MTH00165 507 ISYYPLNLGSLS-LKSFDQGWSEYFGGQGLYNFLKKLSKLIQWlQNNNLKIYLLSFLLWMIILLLLFL 573
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
30-599 |
1.66e-100 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 316.71 E-value: 1.66e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 30 QYAKTMIFYSFMAsLPPTIMFTQSGQEMMISnWYWMTIQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPN 109
Cdd:MTH00207 9 IASYLLWFMSILM-FPLSLYLMMCNKTILIE-WEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKF 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 110 INRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDIGFILSMAWfMVNS 189
Cdd:MTH00207 87 LSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSIGW-TLNQ 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 190 NSWELQQIFMLNLNNttLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMI 269
Cdd:MTH00207 165 GHWSITNMWQTDMNN--YIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 270 QTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDE 349
Cdd:MTH00207 243 NPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 350 QDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATSLTAVYSTRIIFFALLG 429
Cdd:MTH00207 323 QDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWS 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 430 KPRFPSLILINENNPLLTNPITRLLIGSIFAGFLIsNNITPSTVPQMTMPLYIKLTALFVTLagfaMALELSYMTQSLKY 509
Cdd:MTH00207 403 PNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSAL-NWWLPTPQEEPILPLQYKLLPLLVVT----LGALLAWLFTTPNI 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 510 KHPSTMFKfSTMLGYFPLTMHRLSPLTSLTMSQK------SATMLLDLIWLENTLPKLISKIQQNTSVMVSNQKGLIKLY 583
Cdd:MTH00207 478 TKTPLLIN-NPLSHFASCLMWFLVPLSSQFIMSTpmnlshNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNN 556
|
570
....*....|....*.
gi 2413964610 584 FLSFLITMVLALIIFN 599
Cdd:MTH00207 557 YLMMSFVLLTIIIIMT 572
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
31-598 |
9.21e-98 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 309.27 E-value: 9.21e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 31 YAKTMIFYSFMASLPPTIMFTQ--SGQEMMISNWYWMTIQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDP 108
Cdd:MTH00209 1 FKKMQMFSLMLLFLFSFLMFVIfmWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 109 NINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVN 188
Cdd:MTH00209 81 FKKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLV-IYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMH 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 189 SNSWELQQIFMLNLNNTTLPLMglLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKM 268
Cdd:MTH00209 160 GNWNIFYLNFNSNLGSVISVLI--VLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPF 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 269 IQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGD 348
Cdd:MTH00209 238 FSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGH 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 349 EQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATSLTAVYSTRIIFFALL 428
Cdd:MTH00209 318 SQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLW 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 429 GKPRFPSLILINENNPLLTNPITRLLIGSIFAGFLISNNITPSTVPqMTMPLYIKLTALFVTLAGFAMALELSYMTQSLK 508
Cdd:MTH00209 398 GPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNS-VVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLI 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 509 YKHPSTMFkFSTMLGYFPLTMHRLSPLTSltMSQKSATMLLDLIWLENTLPKLISKI-QQNTSVMVSNQKGLIKLYFLSF 587
Cdd:MTH00209 477 KGYKVNYF-LSQMWFLPDLSSQPVNKFTM--KLSKTMLKLLDQGWVEKMSGQGSFKVlKKSSKLSQIIQNNSLKLFVTFM 553
|
570
....*....|.
gi 2413964610 588 LITMVLALIIF 598
Cdd:MTH00209 554 MLILLGVILFM 564
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-588 |
5.18e-92 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 297.25 E-value: 5.18e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 59 ISNWYWMTIQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFI 138
Cdd:MTH00032 59 IELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFI 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 139 GWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELqqiFMLNLNNTTLPLMG------- 211
Cdd:MTH00032 139 GWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDF---LTFNGGSVGSGIMDrgyyggg 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 212 ---------------LLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMIQTLALCL 276
Cdd:MTH00032 216 ayesplapfaiigilLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIF 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 277 GAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPH-LAFLHICTHAFFKAMLFLCSGSIIHSLG-DEQDIRK 354
Cdd:MTH00032 296 GALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRK 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 355 MGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIE------------------------------------TANTS 398
Cdd:MTH00032 376 MGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEltysgrnmgipfgssllkiqgdigikkddrgsiggpEGYPS 455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 399 YTNAWALLITLIATSLTAVYSTRIIFFALLGKPRFPSLILINENNPLLTNPITRLL----IGSIFAGFLIsNNITPSTVP 474
Cdd:MTH00032 456 RGSAFAFWLGTVAALLTAFYSIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLsllcFGAIFVGYLI-QDILIGDIE 534
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 475 QMTMPLYIKLTALFVTLAGFAMALELSYMTQSLKYKH------PSTMFKFSTMLG---YFPLTMHRLSPLTSLTMSQKSA 545
Cdd:MTH00032 535 HPIVPPLIKVMPTLMGLFGMGLCLWAQKGTREGELYWgfdpigPSFLLSIYSFLGgawQGDHLINKLVAIPLFSFGHWGI 614
|
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 2413964610 546 TMLLDLIWLENTLPKLISKIQQNTSVMVSN-QKGLIKLYFLSFL 588
Cdd:MTH00032 615 YKTLDRGWLELFGPQGISTIALRVSQFISNlQSGVISRYALVLL 658
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
64-432 |
1.21e-89 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 291.16 E-value: 1.21e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 64 WMTIQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGV 143
Cdd:PRK07376 75 WASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELV 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 144 GIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQI---FMLNLNNTTLP-----LMGLL-- 213
Cdd:PRK07376 155 GMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIadrLSELVSSGAVSgwlalLLCILvf 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 214 LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMIQTLALCLGAITTLFTAICALTQND 293
Cdd:PRK07376 235 LGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQND 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 294 IKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGD--------EQDIRKMGGLFKSLPFT 365
Cdd:PRK07376 315 IKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPIT 394
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2413964610 366 TTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNAWalLITLIATSLTAVYSTRIIFFALLGKPR 432
Cdd:PRK07376 395 AITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALW--FVGFLTAGMTAFYMFRMYFLTFEGEFR 459
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
103-424 |
1.00e-70 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 242.10 E-value: 1.00e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 103 YMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSM 182
Cdd:CHL00025 114 YMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGI 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 183 AWFMVNSNSWELQQIFM----LNLNNTTLPLMG------LLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAG 252
Cdd:CHL00025 194 LGFYWITGSFEFRDLFEifnnLIYNNEVNLLFAtlcaflLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAG 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 253 IFLLIRFYPLVENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFK 332
Cdd:CHL00025 274 IFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSK 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 333 AMLFLCSGSIIHSLG--------DEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIetantsyTNAWA 404
Cdd:CHL00025 354 ALLFLGSGSVIHSMEpivgyspdKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL-------NDSWL 426
|
330 340
....*....|....*....|....*
gi 2413964610 405 L-----LITLIATSLTAVYSTRIIF 424
Cdd:CHL00025 427 YspifaIIAWSTAGLTAFYMFRIYL 451
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
36-411 |
7.31e-66 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 229.42 E-value: 7.31e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 36 IFYSFmASLPPTIMftqSGQEMMISnWYWmtIQTMKLSLSFKLDFFSMVFmpvALFIT---WSIMEFSMWYMHSDPNINR 112
Cdd:PRK12647 27 LFLYF-LSFIPEIA---AGETVRGG-YAW--VPSLGVNLSFLLDGLSLTF---ALLITgigTLIVLYAGGYLKGHPDLGR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 113 FFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDI----GFILsmAWFMvn 188
Cdd:PRK12647 97 FYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLallaGLIL--LGNV-- 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 189 SNSWELQQIF----MLNLNNTTLPLMGLLLA-ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLV 263
Cdd:PRK12647 173 TGTYSLSELLasgdVIREHPLYLAILLLVLGgAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVL 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 264 ENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHL---AFLHICTHAFFKAMLFLCSG 340
Cdd:PRK12647 253 GGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAG 332
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2413964610 341 SIIHSLGdEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETanTSYTNAWALLITLIA 411
Cdd:PRK12647 333 IIDHETG-TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEA--LLEAPLWSLILTVAA 400
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
72-432 |
4.66e-60 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 215.68 E-value: 4.66e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 72 LSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFfkYLLM--FLVTMLILVTANNIFQLFIGWEGVGIMSFL 149
Cdd:PRK12650 71 VNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSF--YLLMtaFMAAMLLLVLADDVVVLFVAWELVSLASFF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 150 LIGwwYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIFMLNL--NNTTLP-LMGLLLA--ATGKSAQFG 224
Cdd:PRK12650 149 LIA--RSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaEKPGLTtVVAVLIAvaAFTKSAQFP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 225 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSS 304
Cdd:PRK12650 227 FHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 305 QLGLMMVTIGINQPH---LAFLHICTHAFFKAMLFLCSGSIIHSLGdEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPF 381
Cdd:PRK12650 307 QLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQAG-TRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPP 385
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2413964610 382 LTGFYSKDLIIETANTSYTNAWALLITLIATSLTAV----YSTRIIFFALLGKPR 432
Cdd:PRK12650 386 LFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAVftfaYSARLVLGAFVDGPR 440
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
72-432 |
6.32e-60 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 215.05 E-value: 6.32e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 72 LSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLI 151
Cdd:PRK12648 68 LNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 152 GWWYGRADANTAALQAILYNRIGdiGFILsMAWFMVNSN---SWELQQIF----MLNLNNTTLPLMGL-LLAATGKSAQF 223
Cdd:PRK12648 148 GYWHHRADARRGARMALTVTGAG--GLAL-LAGVLLLGHivgSYDLDVVLaagdLIRAHPLYPPALVLiLLGAFTKSAQF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 224 GLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYP-LVENNK--MIQTLAlclGAITTLFTAICALTQNDIKKIVAF 300
Cdd:PRK12648 225 PFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPvLAGTEEwfWIVGGA---GLITLLLGAYFALFQHDLKGLLAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 301 STSSQLGLMMVTIGINQPhLAFL----HICTHAFFKAMLFLCSGSIIHSLGdEQDIRKMGGLFKSLPFTTTALIIGSLAL 376
Cdd:PRK12648 302 STISHLGLITLLLGLGSP-LAAVaaifHIINHATFKASLFMAAGIIDHETG-TRDMRRLSGLRRLMPITATLAMVAAAAM 379
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 377 TGMPFLTGFYSKDLII-ETANTSYTNAWALLITLIAT---SLTAVYSTRIIFFALLGKPR 432
Cdd:PRK12648 380 AGVPLLNGFLSKEMFFaETLDTHLLGSLDWLLPVAATlagAFSVAYSLRFIHDVFFGPPP 439
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
35-432 |
1.82e-56 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 203.92 E-value: 1.82e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 35 MIFYSFMASLPPTIMftQSGQEMMISNWywmtIQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFF 114
Cdd:TIGR00940 36 LVCFLYTLGLYPYTA--SGGVLHYTIDW----VPELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFY 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 115 KYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWEL 194
Cdd:TIGR00940 110 AYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSI 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 195 QQIFMLNLNNTTLPLMG-----LLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMI 269
Cdd:TIGR00940 190 DAVIASADAIRNSPLFGtamvlVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAW 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 270 QTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHL----------------AFLHICTHAFFKA 333
Cdd:TIGR00940 270 FWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKG 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 334 MLFLCSGSIIHSLGdEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSY------TNAWALL- 406
Cdd:TIGR00940 350 SLFMAAGIIDHETG-TRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAHlvnpfdTVTLGYLf 428
|
410 420
....*....|....*....|....*...
gi 2413964610 407 --ITLIATSLTAVYSTRIIFFALLGKPR 432
Cdd:TIGR00940 429 pyVATVASVFTFVYSLRFIHGVFFGRPK 456
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
72-426 |
3.61e-56 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 195.75 E-value: 3.61e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 72 LSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLI 151
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLV 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 152 GwWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQI-FMLNLNNTTLPLMGLLLAATG---KSAQFGLHP 227
Cdd:COG0651 148 A-LGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaARLAELDPGLLLAAFALLLVGfgiKAALFPLHF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 228 WLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRFYPLV---ENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTS 303
Cdd:COG0651 227 WLPDAYpAAPSPVSALL-SGLLTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSV 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 304 SQLGLMMVTIGINQPHL---AFLHICTHAFFKAMLFLCSGSIIHSLGdEQDIRKMGGLFKSLPFTTTALIIGSLALTGMP 380
Cdd:COG0651 306 SQIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLP 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2413964610 381 FLTGFYSKDLIIETANTSytNAWALLITLIATS-LTAVYSTRIIFFA 426
Cdd:COG0651 385 PLSGFVSKWLLLQAALEA--GAWLLAAVLLLSSlLTLAYFVRIFGRA 429
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
67-463 |
7.72e-56 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 203.62 E-value: 7.72e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 67 IQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSD-PNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGI 145
Cdd:PRK12644 61 IPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDePRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTV 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 146 MSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIFMLNLNNTTLP--LMGLLLAATGKSAQF 223
Cdd:PRK12644 141 LSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPPTGPAVSvaVVLILVGALSKSAIV 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 224 GLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTS 303
Cdd:PRK12644 221 PFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTV 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 304 SQLGLMMVTIGINQPH--LAFLH-ICTHAFFKAMLFLCSGSIIHSLGdEQDIRKMGGLFKSLPFTTTALIIGSLALTGMP 380
Cdd:PRK12644 301 SQLGFLTVLVGIGTRDaaLAGLAmLLAHALFKAALFLVVGIIDHSTG-TRDIRKLSGLGRRQPVLAVVAALAAASMAGLP 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 381 FLTGFYSKDLIIET---ANTSYTNAWALLITLIATS-LTAVYSTRIIFFALLGKPRFPSLILINENN---PLLTNPITRL 453
Cdd:PRK12644 380 PLLGFVAKEAALEAvlhDGALGPAGPVVLAGIVLGSiLTVAYSLRFLWGAFARKPGAFPSVAVTEMHrpsPLFLAPPAVL 459
|
410
....*....|
gi 2413964610 454 LIGSIFAGFL 463
Cdd:PRK12644 460 AVLGLVLGLL 469
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
64-434 |
1.28e-54 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 198.83 E-value: 1.28e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 64 WMTIqtMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYM-HSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEG 142
Cdd:PRK12646 64 WMKT--LDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 143 VGIMSFLLIGWWYGRADANTAALQAILYNRIGD----IGFILSMAWFMVNSNSWELQQIFMLNLNNTTLPLM-GLLLAAT 217
Cdd:PRK12646 142 TSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGlallVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMIfMFLLGAF 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 218 GKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMIQTLALCLGAITTLFTAICALTQNDIKKI 297
Cdd:PRK12646 222 TKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGI 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 298 VAFSTSSQLGLMMVTIGIN-----QPHLAF------------LHICTHAFFKAMLFLCSGSIIHSLGdEQDIRKMGGLFK 360
Cdd:PRK12646 302 LAYSTISQLGMIMAMVGIGggyaqHQQDAIasiyvfvlfaalFHLMNHAIFKCALFMGVGIIDHEAG-TRDIRILSGMRQ 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 361 SLPFTTTALIIGSLALTGMPFLTGFYSKDLIIET-ANTSYTNAWALLIT-------LIATSLTAVYSTRII---FFALLG 429
Cdd:PRK12646 381 LFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDAlTQTGQLSQFSLISMiiivfigVIASIFTFTYALYMVkevFWGKYD 460
|
....*
gi 2413964610 430 KPRFP 434
Cdd:PRK12646 461 SKVFT 465
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
72-429 |
4.12e-51 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 184.35 E-value: 4.12e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 72 LSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLI 151
Cdd:MTH00095 37 LSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 152 gWWYGRADANTAALQAILYNRIGDIgFILSMAWFMVNSNSWELQQIFMLNLNnttlpLMGLLLAATGKSAQFGLHPWLPS 231
Cdd:MTH00095 117 -LFYNNWDSNSGAMNTALTNRIGDF-FIFLFFSGFIFSSYYFFSFSFFSSSM-----ILMLLLTSFTKSAQFPFSSWLPK 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 232 AMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMIqTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMV 311
Cdd:MTH00095 190 AMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVM-KIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSML 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 312 TIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLI 391
Cdd:MTH00095 269 TFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELI 348
|
330 340 350
....*....|....*....|....*....|....*...
gi 2413964610 392 IETANTSYTNAWALLITLIATSLTAVYSTRIIFFALLG 429
Cdd:MTH00095 349 LELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLS 386
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
88-419 |
6.69e-50 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 179.78 E-value: 6.69e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 88 VALFITWSIMEFSMWYMH-------SDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWwYGRADA 160
Cdd:PRK06525 83 VVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISY-YQSPKA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 161 NTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIFMLNLNNTTLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVS 240
Cdd:PRK06525 162 LRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPAS 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 241 ALLHSSTMVVAGIFLLIRFypLVENNKMIQTLALCLGAITTLFTAICALT---QNDIKKIVAFSTSSQLGLMMVTI--GI 315
Cdd:PRK06525 242 AYLHAASMVKVGVYIFARA--IQSMGPIPHVIGYVGAVMAIVTLLYGFLMylpQQDMKRLLAYSTITQLGYMFFGLslAI 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 316 NQPHLAF----LHICTHAFFKAMLFLCSGSIIHSLGdEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLI 391
Cdd:PRK06525 320 LGSRLALegsiAYIFNHAFAKSLFFLVAGALSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPI 398
|
330 340
....*....|....*....|....*...
gi 2413964610 392 IETANTSYTNAWALLITLIATSLTAVYS 419
Cdd:PRK06525 399 FAAGFELSVEYWILLPAMVLLLIESVAS 426
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
130-412 |
1.07e-49 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 174.04 E-value: 1.07e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 130 ANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQI-----FMLNLNN 204
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 205 TTLPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFYPLVEN-NKMIQTLALCLGAITTL 282
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPsSPFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 283 FTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPH---LAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLF 359
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2413964610 360 KSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTNaWALLITLIAT 412
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWI-FLVLAGVVGS 291
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
16-430 |
1.17e-49 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 184.26 E-value: 1.17e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 16 TLPIMSATNNHSYPQYAKTMIFYSFM--ASLPPTIMFTQSGQemmiSNWYWMTiqTMKLSLSFKLDFFSMVFMPVALFIT 93
Cdd:PRK12649 20 TVPVLEKVLKQRIGWFAAAIAFTSFAliAQVAPEVIHGTIIT----GSISWLP--SAGVEFSIYADGLAVLIGLIASGIG 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 94 WSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRI 173
Cdd:PRK12649 94 VIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAG 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 174 GDIGFILSMAWFMVNSNSWELQQI-----FMLNLNNTTLPLMGLLL---AATGKSAQFGLHPWLPSAMEGPTPVSALLHS 245
Cdd:PRK12649 174 GGLFMFAGFLLLHVITGTYDIATIlqdseLIENIKGHPLFLITLILifiGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHS 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 246 STMVVAGIFLLIRFYPLVENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPH------ 319
Cdd:PRK12649 254 ATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYHepglgv 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 320 -LAFLHICTHAFFKAMLFLCSGSIIHSlGDEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETA--- 395
Cdd:PRK12649 334 aAATFHLLNHATFKACLFLVAGIVAHE-AATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSvem 412
|
410 420 430
....*....|....*....|....*....|....*...
gi 2413964610 396 NTSYTNAWALLITLIATS---LTAVYSTRIIFFALLGK 430
Cdd:PRK12649 413 GALIGGPFTIIIPAVAVLggvFTFAYSIKLIDGIFLGE 450
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
111-436 |
1.29e-49 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 184.36 E-value: 1.29e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 111 NRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDI----GFILsmawFM 186
Cdd:PRK12645 110 GNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLsmlgGFIL----LY 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 187 VNSNSWELQQIF--MLNLNNTTL--PLMGL-LLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYP 261
Cdd:PRK12645 186 IMTGSFSIREMIanADEIQNSPLfiPAMILiLLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTP 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 262 LV-ENNKMIQTLALcLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHL----------------AFLH 324
Cdd:PRK12645 266 IFaGSQVWFWTVTL-VGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFH 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 325 ICTHAFFKAMLFLCSGSIIHSLGdEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIET------ANTS 398
Cdd:PRK12645 345 LINHATFKGSLFMIVGIVDHETG-TRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESmlnateANLF 423
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2413964610 399 YTNAWALLITLIA---TSLTAVYSTRIIFFALLGKPRFPSL 436
Cdd:PRK12645 424 SLDTWGVLFPVIAwvaSVFTFVYSIIFIFKTFFGKYKPEQL 464
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
61-431 |
3.08e-49 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 180.88 E-value: 3.08e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 61 NWYWMTIQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGW 140
Cdd:PRK07390 70 SFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 141 EGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIFM----LNLNNTTLPLMGLLLAA 216
Cdd:PRK07390 150 EILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAwaatANLDPLTATLLGLALIA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 217 --TGKSAQFGLHPWLPSAMEGPTPVSaLLHSSTMVVAGIFLLIRFYPLVENNKMIQTLALCLGAITTLFTAICALTQNDI 294
Cdd:PRK07390 230 gpTGKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDI 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 295 KKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSlGDEQDIRKMGGLFKSLPFTTTALIIGSL 374
Cdd:PRK07390 309 KRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSA 387
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2413964610 375 ALTGMPFLTGFYSkdlIIETANTSYTNAWALLITLIATS-LTAVYSTRIIFFALLGKP 431
Cdd:PRK07390 388 GLVALLPLGGFWA---LLRLADGLWAVSPWLVGVLLLVNaLTAFNLTRVFRLVFLGKP 442
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
418-598 |
6.03e-42 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 149.24 E-value: 6.03e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 418 YSTRIIFFALLGKPRFPSLILINENNPLLTNPITRLLIGSIFAGFLISNNITPSTvPQMTMPLYIKLTALFVTLAGFAMA 497
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKP-PMMTMPLYLKLLALLVTILGLLLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 498 LELSYMTQSLKYKHPS-TMFKFSTMLGYFPLTMHRLSPLTSLTMSQKSATMlLDLIWLENTLPKLISKIQQNTSVMVSN- 575
Cdd:pfam06455 80 LELSNLSNKQLKKSLNfNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQ-IDQGWSEKFGPQGIAKTLMTLSKIIQNs 158
|
170 180
....*....|....*....|...
gi 2413964610 576 QKGLIKLYFLSFLITMVLALIIF 598
Cdd:pfam06455 159 QKGLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
72-462 |
2.00e-38 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 148.10 E-value: 2.00e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 72 LSLSFKLDFFSMVFMPVALFITWsimeFSMWY-MHSDPNINRFFKYLLMFLVTMLI--LVTANnIFQLFIGWEGVGIMSF 148
Cdd:PRK08375 69 IGIELRADSLSALFLLVTSILAI----AALLYaIGYGEHRQTRFYALFLLLLAGLLgaLLTAD-LFNLFVFLEIMSLSSY 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 149 LLIGWwYGRADANTAALQAILYNRIGDIGFILSMA--WFMVNSnswelqqifmLNLNNTT--LPLMGLLLAATG------ 218
Cdd:PRK08375 144 ALVAM-GGDRRALAAARKYLIVGLIGSTFLLIGVGllYGVTGT----------LNMADLAgaLAENPTVVTAFGfvllal 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 219 --KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLV-----ENNKMIQTLALCLGAITTLFTAICALTQ 291
Cdd:PRK08375 213 alKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVfggdfRFALGLGWLLAVLALLSMLVGSLAALGQ 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 292 NDIKKIVAFSTSSQLGLMMVTIGINQPHL---AFLHICTHAFFKAMLFLCSGSIIHSLGdEQDIRKMGGLFKSLPFTTTA 368
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAA 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 369 LIIGSLALTGMPFLTGFYSKDLIIETANtsYTNAWALLITLIATSL-TAVYSTRIIFFALLGKPRFPSLILINENNPLLT 447
Cdd:PRK08375 372 FAVASLSLIGVPPTSGFVSKWYLVVGAV--EAGQWLVLAVLLASSLlALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGML 449
|
410
....*....|....*
gi 2413964610 448 NPITRLLIGSIFAGF 462
Cdd:PRK08375 450 APSLALALLSLLLGI 464
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
71-432 |
9.85e-37 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 143.96 E-value: 9.85e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 71 KLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLL 150
Cdd:PRK12667 73 PIGIVYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGL 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 151 IGWWYGRADANTAALQAILYNRIGD------IGFI------LSMAWFMVNSNSWELQQIFMLNLNNTTLPLMGLLLAA-- 216
Cdd:PRK12667 153 VAYYRDRGDAVEAAIKYALIGAVGTtlyflaLAFLyatfgtLNMADLSAKIRGLSFPLTGGLAGNPPLALGVALALALwa 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 217 -TGKSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRFY--------PLVENNKMIQTLALCLGAITTLFTAI 286
Cdd:PRK12667 233 fTIKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGAL 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 287 CALTQNDIKKIVAFSTSSQLGLMMVTIGINQP---HLAFLHICTHAFFKAMLFLCSGSIIHSLGdEQDIRKMGGLFKSLP 363
Cdd:PRK12667 312 MMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMP 390
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2413964610 364 FTTTALIIGSLALTGMPFLTGFYSKDLIIEtANTSYTNAWALLITLIATSLTAVYSTRIIFFALLGKPR 432
Cdd:PRK12667 391 IASFAFLIGALSLVGIPPLNGFFSKLLLFN-ALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPK 458
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
91-343 |
9.08e-35 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 137.91 E-value: 9.08e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 91 FITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILY 170
Cdd:PRK08168 80 LLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIA 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 171 NRIGDIGFILSMAWFMVNSNSWELQQI-FMLNLNNTTLPL----MGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHS 245
Cdd:PRK08168 160 DRLAELLLLAAAALAYLEVGSLSLSALwAHLAAQGASPSLqaaaLLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 246 STMVVAGiFLLIRFYPLVENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHI 325
Cdd:PRK08168 240 GVVNLGG-FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHL 318
|
250
....*....|....*...
gi 2413964610 326 CTHAFFKAMLFLCSGSII 343
Cdd:PRK08168 319 VAHSLYKAHAFLSASEAV 336
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
5-432 |
2.07e-33 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 133.67 E-value: 2.07e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 5 STLMMLSLIILtLPIMSA--------TNNHSYPQYAKTMIFYSFMASLPPTIMFTQSGQEM-MISNWYWmtIQTMKLSLS 75
Cdd:COG1008 1 MGMPLLSLLIL-LPLLGAllllllprRNARLARWVALAVSLLTLLLSLYLLAGFDPGTGGFqFVESYPW--IPSLGISYH 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 76 FKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPninRFFKYLLMFLVTMLILV-TANNIFQLFIGWEGVGIMSFLLIGWW 154
Cdd:COG1008 78 LGVDGISLPLVLLTALLTPLAILASWNEIKKRP---KLYYALLLLLEAGMIGVfLALDLFLFYVFWELMLIPMYFLIGIW 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 155 yGRADANTAALQAILYNRIGDIGFILSMAW--FMVNSNSWELQQIFMLNLNNTT-LPLMGLLLAATG-KSAQFGLHPWLP 230
Cdd:COG1008 155 -GGERRIYAAIKFFLYTLAGSLLMLVAILAlyFLAGALTFDIAELAAAPLPLTAqLLLFLAFFIAFAvKVPMFPFHTWLP 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 231 SA-MEGPTPVSALLhSSTMVVAGIFLLIRF-YPLV-ENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG 307
Cdd:COG1008 234 DAhVEAPTAGSVLL-AGVLLKMGGYGLLRFaLPLFpEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 308 LMMV------TIGINQphlAFLHICTHAFFKAMLFLCSGSIIHSLGDeQDIRKMGGLFKSLPFTTTALIIGSLALTGMPF 381
Cdd:COG1008 313 FVLLgifalnPLGLQG---AVLQMVSHGLITAALFLLVGVLYDRTHT-RDIADLGGLAKRMPVLAALFLLAALASLGLPG 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 2413964610 382 LTGFYSKDLIIETANTSYTnaWALLITLIATSLTAVYSTRIIFFALLGKPR 432
Cdd:COG1008 389 TSGFVGEFLVLLGAFQVNP--WLAILAALGLILTAAYLLWMYQRVFFGPLK 437
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
76-431 |
9.19e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 126.36 E-value: 9.19e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 76 FKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWY 155
Cdd:PRK08376 86 WEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRN 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 156 GRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQI-FMLNLNNTTLPLMGLLLAATG---KSAQFGLHPWLPS 231
Cdd:PRK08376 166 DTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLaVKMSENPTVVAKIALALFIAGlamKSGAVPVHMWLPD 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 232 AM-EGPTPVSALLHSSTmvVAGIFLLIR----FYPLVENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQL 306
Cdd:PRK08376 246 AYpAAPSSISAMLLVIK--QAGLYALARvlfsIYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQI 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 307 GLMMVTIGINQPHL---------------AFLHICTHAFFKAMLFLCSGSIIHSLGdEQDIRKMGGLFKSLPFTTTALII 371
Cdd:PRK08376 324 GYMLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFLI 402
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 372 GSLALTGMPFLTGFYSKDLIIETanTSYTNAWALLITLIATSLTAVYSTRIIFFALLGKP 431
Cdd:PRK08376 403 GAAAIVGLPPFNGFASKWLIYES--SALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPP 460
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
128-432 |
3.99e-30 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 125.01 E-value: 3.99e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 128 VTANNIFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIFMLNLNNTTL 207
Cdd:PRK12668 110 VFAGDLLTLFVFWELMAFTSTFLV-WARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 208 PLMGLLLaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVEnnkmiqtLALCLGAITTLFTAIC 287
Cdd:PRK12668 189 ILIGFGV----NAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTE-------LLIYIGAAMAVYGVFF 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 288 ALTQNDIKKIVAFSTSSQLGLMMVTIGINQP---HLAFLHICTHAFFKAMLFLCSGSIIHSLGdEQDIRKMGGLFKSLPF 364
Cdd:PRK12668 258 ALLENDLRRLLSYHIVSQVGYMVAGIGIGTAlaiNGAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSMPL 336
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 365 TTTALIIGSLALTGMPFLTGFYSKDLIIETAN-TSYTNAWALLitLIATSLTAVYST-RIIFFALLGKPR 432
Cdd:PRK12668 337 TALFCLVGALSISAFPLFSGFVSKSMIISAAGeDHYVWVWLLL--LLASAGTFLHFGiKLPYFAFFGGDS 404
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
6-464 |
3.51e-29 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 121.19 E-value: 3.51e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 6 TLMMLSLIILTLPIMSATNNHSYPQYAKT------MIFYSFMASLPPTIMFTQSGQEMMISNWywmtiqtmklslsFKLD 79
Cdd:PRK06458 2 SYSILFALLLLIPLLASLLLFALRKRRLVatlnvlGITLTLILALWLVFTVPDAGEIFAAGLW-------------FFID 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 80 FFSMVFMPVALFITWSIMEFSMWYM-------HSDPNINRFFKYLL-MFLVTMLILVTANNIFQLFIGWEGVGIMSFLLI 151
Cdd:PRK06458 69 DLNVFFLALIGVVGFLTSLYSIGYMrhevehgELSPVTLRLYYGMYqLFLFTMLLALTSNNLGLMWVAIEATTLSSALLV 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 152 GWwYGRADANTAALQAILYNRIGD----IGFIL--------------SMAWFMVNSNSWELQQIFMlnlnntTLPLMGLL 213
Cdd:PRK06458 149 GI-YRTRASLEAAWKYIIICSVGVafalFGTILvyanaatvmgdgemAILWTELLKHASLLDPTLM------KLAFVFLL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 214 LAATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAgIFLLIRFYPLVE---NNKMIQTLALCLGAITTLFTAICAL 289
Cdd:PRK06458 222 IGFGTKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDaaiGSDFPGRLLLIFGLLSVLVAAFFLL 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 290 TQNDIKKIVAFSTSSQLGLMMVTIGINQP---HLAFLHICTHAFFKAMLFLCSGSIIHSLGdEQDIRKMGGLFKSLPFTT 366
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPlgiFAALLHMLNHSLTKSAIFFASGNVLQKYG-TRDINVIRGLLKVSPLTG 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 367 TALIIGSLALTGMPFLTGFYSKDLIIETA-NTSYTNAWALLITLIATSLTAVYS--TRIIFfallGKPrfPSLILINENN 443
Cdd:PRK06458 380 WGLMLGALAIAGMPPFGVFISEFLILTAGlARGPLLIAILLLLLLTLAFAALVRrvAGMVF----GEP--PEAVNRGDLG 453
|
490 500
....*....|....*....|.
gi 2413964610 444 PLLTNPITRLLIGSIFAGFLI 464
Cdd:PRK06458 454 WLTTSPMFVHLVLVLVLGLYI 474
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-470 |
1.84e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 118.90 E-value: 1.84e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 113 FFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGwwYGRAD-ANTAALQAILYNRIGDIGFILSMAWFMVNSNS 191
Cdd:PRK07234 96 FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA--YPRTDrAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGT 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 192 WELQQIFMLNLNNTTLPLMGLLLaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMIQT 271
Cdd:PRK07234 174 FAFSGLATADPEAFALIALGLLV----KGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVR 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 272 LalcLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINqphlAFLHIcTHAFFKAMLFLCSGsIIHSLGDEQD 351
Cdd:PRK07234 250 I---FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG----GLYAL-AHGLVKSTLFLCAG-ALPSRNFTEL 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 352 IRKMGGLFKSLPftttaLIIGSLALTGMPFLTGFYSKDLIIETANTsytnaWALLITLIATSLTAVYSTRIIFFALLGKP 431
Cdd:PRK07234 321 ISQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKVLTLKNLLP-----WQAIALNLAAVGTAASFWKFIFLPFSADD 390
|
330 340 350
....*....|....*....|....*....|....*....
gi 2413964610 432 RFPSLILINENNPLLTNPITRLLIGSIFAGFLISNNITP 470
Cdd:PRK07234 391 EDKKPLPGFWNAIALLLGGLFLANGVYTEAYTLGNILKA 429
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
72-470 |
3.36e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 118.38 E-value: 3.36e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 72 LSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDpNINRFFKYLLMFLVTMLILVTAN---NIFQLFIGWEGVGIMSF 148
Cdd:PRK06589 75 YSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAIN-NIDSSSRFLFFFNLTILIGVLIAlssDLFTMFVCYELLTISTA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 149 LLIGWwygradANTAALQAILYNRIGdIGFILSMAWFMV-------NSNSWELQQIFMLNlNNTTLPLMGLLLAATGKSA 221
Cdd:PRK06589 154 FLIGH------TRNNISLSGGYKYLK-ILMISALLLFLPaviliytKTGNLDFVSGGLFS-KNQSIILLLMFIYGIAKTA 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 222 QFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMIQTLA-----LCLGAITTLFTA-ICALTQNDIK 295
Cdd:PRK06589 226 IFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFaefnwLIFIPIVSIFYSsLKALKTDNIK 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 296 KIVAFSTSSQLGLMMVTIGINQP---HLAFLHICTHAFFKAMLFLCSGSIIhSLGDEQDIRKMGGLFKSLPFTTTALIIG 372
Cdd:PRK06589 306 KILAYSTISQLSLALLSAFILTPkalGAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISIS 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 373 SLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITL---IATSLTAVYSTRIIFFALlgKPRFPSLILINENNPLLTNP 449
Cdd:PRK06589 385 SLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLvviASSILSALYLLKILSSIY--KPSLSENSFITKSLPYLMQI 462
|
410 420
....*....|....*....|.
gi 2413964610 450 ITRLLIGSIFAGFLISNNITP 470
Cdd:PRK06589 463 SVITCCCALTLFYFIQILIRE 483
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
72-414 |
4.69e-28 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 119.07 E-value: 4.69e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 72 LSLSFKLDFFSMVFMPVALFITWSIMEFSMWY---MHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSF 148
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 149 LLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQqIFMLNLNNTTLPLMGLLLAATGKSAQFGLHPW 228
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELS-PLGASAGILSLVFLLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 229 LPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFYPLVENNKMI-QTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQL 306
Cdd:PRK08667 228 LPYAHPAsPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWwGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENI 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 307 GLMMVTIGI-------NQPHLAFL-------HICTHAFFKAMLFLCSGSIIHSLGDeQDIRKMGGLFKSLPFTTTALIIG 372
Cdd:PRK08667 307 GIILMGIGLyvifgvyGLDTLALLalggalfHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVG 385
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2413964610 373 SLALTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATSL 414
Cdd:PRK08667 386 AVSIAALPPFNGFASELLLYESFFQSFSVADPLIKILLFSVL 427
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
119-391 |
6.23e-28 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 118.84 E-value: 6.23e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 119 MFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIF 198
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMR 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 199 MLNLNnttlPLMG---LLLAATGKSAQFG---LHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIR--FYPLVENNKMI 269
Cdd:PRK06521 201 AAHLS----PFWAslvFLLALFGFGAKAGlvpLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRvvFDLLGAPGWWW 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 270 QTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGI-------NQPHLAFL-------HICTHAFFKAML 335
Cdd:PRK06521 276 GVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAALaltaalyHLLNHALFKSLL 355
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 2413964610 336 FLCSGSIIHSLGdEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLI 391
Cdd:PRK06521 356 FLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLL 410
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
59-425 |
8.59e-26 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 111.51 E-value: 8.59e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 59 ISNWYWMTIQTMKLSLSFKLDF----FSMVFMPVALFITWSImeFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIF 134
Cdd:MTH00063 22 SSSVSLNFLSFGGYSWLINFDFdyvtFGVLLMLLICFYYSLL--YTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 135 QLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDIGFILSMAWFmvnsnswelqqiFMLNLNNTTLPLMGLLL 214
Cdd:MTH00063 100 STLIFWEYLGVVSFFLI-LFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLS------------CWGGSGSFLCCLFFFLI 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 215 AATgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMIQTLALCLgAITTLFTAICALTQNDI 294
Cdd:MTH00063 167 VFT-KSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLL-LLTIFITGVSSLFFSDL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 295 KKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIR-----KMGGLFksLPFTTTAL 369
Cdd:MTH00063 245 KKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNcvyssILYGSW--NLFYLFLL 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2413964610 370 IIGslaLTGMPFLTGFYSKDLIIETANTSYTNAWALLITLIATSLTAVYSTRIIFF 425
Cdd:MTH00063 323 VLG---LSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLI 375
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
115-423 |
1.47e-24 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 107.54 E-value: 1.47e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 115 KYLLMFLVTMLI---LVTANNIFQLFIGWEGVGIMSFLLIGWwYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNS 191
Cdd:PRK08377 109 KYAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAY-NKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGT 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 192 WELQQIFML-NLNNTTLPLMGLLLAATG---KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFYPLVENN 266
Cdd:PRK08377 188 LNMAHIAQLaGTIDPTVAQVGLALLIFGlavEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNA 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 267 K---MIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQP---HLAFLHICTHAFFKAMLFLCSG 340
Cdd:PRK08377 267 NgwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQagvDAGVFHMINHAIVKALLFLAVG 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 341 SIIHSLGDEQdIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSK-DLIIETANTSYTnaWALLITLIATSLTAVYS 419
Cdd:PRK08377 347 YVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKfRIILAGLSAGYT--WPVALVLGASVVEAVYY 423
|
....
gi 2413964610 420 TRII 423
Cdd:PRK08377 424 FRLI 427
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
5-438 |
1.47e-23 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 104.51 E-value: 1.47e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 5 STLMMLSLIILtLPIMSATNNHSYPQYAKTMI--------FYSFMASLPPTIMFTqSGQEMMISNWYWMTIQTMKLSLSF 76
Cdd:PRK05846 1 MNWPLLSLLIF-LPLIGGLLVLLTERFGARLArwialigtLLTLLLSLVLWIGFD-SSNAGFQFVEKHPWIPRFGISYHL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 77 KLDFFSMVF-------MPVALFITWsimefsmwymHSDPNINRFFKYLLMFLVTMLILV-TANNIFQLFIGWEGVGIMSF 148
Cdd:PRK05846 79 GVDGISLLLvvltallTPLAVLASW----------EEIKKRVKFYMAALLWLEGGVIGVfAALDLLLFYVFFEAMLIPMY 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 149 LLIGWWyGRADANTAALQAILYNRIGD----IGFILSMAWFMVNSNSWELQQIFMLNLNNT--TLPLMGLLLAATGKSAQ 222
Cdd:PRK05846 149 FLIGVW-GGKNRIYAATKFFLYTLLGSllmlVAIIYLVVVYYNATGTFDIADLLNLPLPPGvqYWLFLAFFIAFAVKMPM 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 223 FGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFL------LIRF-YPLVEN-NKMIQTLALCLGAITTLFTAICALTQND 293
Cdd:PRK05846 228 FPLHTWLPDAHvQAPTAGSVLL-------AGILLkmgaygLLRFsLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTD 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 294 IKKIVAFSTSSQLGLmmVTIGI---NQPHL--AFLHICTHAFFKAMLFLCSGSIIHSLGDEqDIRKMGGLFKSLPFTTTA 368
Cdd:PRK05846 301 IKKLIAYSSISHMGF--VTLGIfagNQLGIqgAIFQMISHGLSSAALFLLVGVLYDRLHTR-DIADYGGLAKVMPVLAAF 377
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 369 LIIGSLALTGMPFLTGFYSKDLIIetANTSYTNAWALLITLIATSLTAVYSTRIIFFALLGKPRFPSLIL 438
Cdd:PRK05846 378 FLFFAMASLGLPGTSGFVGEFLIL--LGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKL 445
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
72-395 |
9.12e-23 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 102.77 E-value: 9.12e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 72 LSLSFKLDFFSMVFMPVALFITWSIMEFSM-WYMHSDPNINRFfkyLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLL 150
Cdd:PRK08668 61 FKLTFTLTHLSWFFAMISLLVIFSVAFFMVsEKTKNDAYFNMF---ALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMM 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 151 IgwWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSW---ELQQIFMLNLNNTTLPLMGLLLAATG--KSAQFGL 225
Cdd:PRK08668 138 V--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFdfaDISQGLINDTSTGFALIVFLFLLAFGvaKAGIFPL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 226 HPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRFYPLVENNKMIQTLA------------LCLGAITTLFTAICALTQN 292
Cdd:PRK08668 216 HVWAPDAYsEAPQSFSAVL-SGQLSKLGAYGFLLVLYVLPGTKLFSEFGtyrgvplfnyilAWLGNISIIVGTLMAILQE 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 293 DIKKIVAFSTSSQLGLMMVTIGINQP---HLAFLHICTHAFFKAMLFLCSGSIIHSLGdEQDIRKMGGLFKSLPFTTTAL 369
Cdd:PRK08668 295 DIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYRTG-TTKISEMGGLIEKMPFTFAMY 373
|
330 340
....*....|....*....|....*.
gi 2413964610 370 IIGSLALTGMPFLTGFYSKDLIIETA 395
Cdd:PRK08668 374 LVAIISLAGIPPMSGFASKWLIFEAL 399
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
74-461 |
1.71e-21 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 98.10 E-value: 1.71e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 74 LSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNiNRFFKYLLMFLVTMLI--LVTANnIFQLFIGWEGVGIMSFLLI 151
Cdd:PRK12663 71 IQFTGDSLSALMVTTASFVATAIMAYGFGDIEHSGR-RYGFPPFILLLMAGVIgsFLTGD-LFNLYVWFEVMLIASFVLI 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 152 GWWyGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIFM-LNLNNTTLPLMGL----LLAATGKSAQFGLH 226
Cdd:PRK12663 149 TLG-QEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMrLNDMGDTATLTTIallfLLAFGMKAALFPFM 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 227 pWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPL--VENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSS 304
Cdd:PRK12663 228 -WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLlfPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVIS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 305 QLGLMMVTIGINQP---HLAFLHICTHAFFKAMLFLCSGSIIHsLGDEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPF 381
Cdd:PRK12663 307 SIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPP 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 382 LTGFYSKDLIIETANTSytNAWALLITLIATSLTAVYSTRIIFFALLGKPRFPSLILINENNPLLTNPITRLLIGSIFAG 461
Cdd:PRK12663 386 FSGFWGKVLLVQGALDN--GAYILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVVVIAMG 463
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
75-431 |
4.46e-21 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 96.34 E-value: 4.46e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 75 SFKLDFFSMVFMPVALFITWSIMEFSMWYMhSDPNINRFFKYLLMFLVT--MLILVTANNIFQLFIGWEGVGIMSFLLIG 152
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYL-ERRGLLRGEFYALLLFATlgMMLMASANDLLTLFLGLELLSLSLYVLVA 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 153 WWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQI---FMLNLNNTTLPLMGLLLAATG---KSAQFGLH 226
Cdd:COG1007 144 FRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIaaaLAAGGANSPLLLLGLVLVLAGlafKLSAVPFH 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 227 PWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRF--YPLVENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTS 303
Cdd:COG1007 224 MWTPDVYEGaPTPVTAFL-ATAPKIAAFAALLRLlvEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 304 SQLGLMMVTIGINQPH---LAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLFKSLPFTTTALIIGSLALTGMP 380
Cdd:COG1007 303 AHAGYLLLGLAAGTPLgvsAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIP 382
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2413964610 381 FLTGFYSKDLIIETA-NTSYTnaWALLITLIATSLTAVYSTRIIFFALLGKP 431
Cdd:COG1007 383 PTAGFFGKFYVFSAAvEAGLY--WLAVIAVLNSVISAYYYLRVVKAMYFDEP 432
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
110-423 |
7.28e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 92.87 E-value: 7.28e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 110 INRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRAdANTAALQAILYNRIG------DIGFILSMA 183
Cdd:PRK12662 109 IPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAFEYLIIGTIGatfyliGIGFLYAIT 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 184 WFMVNSNSWELQQIFMLNlNNTTLPLMGLLLAATGKSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIR-FYP 261
Cdd:PRK12662 188 GTLNMGDMFLIIQDLPTN-RAIQIGVLFIMVGLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRiVYD 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 262 LVENNKMIQTLA-----LCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPH---LAFLHICTHAFFKA 333
Cdd:PRK12662 266 VFKANFVFTTLPfnnvfMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKS 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 334 MLFLCSGSIIHSLGdEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSytNAWALLITLIATS 413
Cdd:PRK12662 346 ALFMVSGSISYHFG-TTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKS--NAWIGLVVLLVGS 422
|
330
....*....|.
gi 2413964610 414 -LTAVYSTRII 423
Cdd:PRK12662 423 gLSVIYVWKIV 433
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
73-462 |
6.77e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 90.01 E-value: 6.77e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 73 SLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINrFFKYLLMFLVTMLI-LVTANNIFQLFIGWEGVGIMSFLLI 151
Cdd:PRK07691 70 GIVFVADMFAALLVLTSSIITFLVILYSFQTIGIERERY-YYYPSVLFMLAGVNgAFLTGDIFNLFVFFEVMLMASYVLI 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 152 GWWyGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSwelqqifmLNLNNTTLPLMGLLLAATG------------- 218
Cdd:PRK07691 149 VIG-GTKIQLRESIKYVLINVVSSAFFVVAVAILYSVVGT--------LNMADISVKIAELSAGQTGlitvvailflfvf 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 219 --KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENN--KMIQTLALCLGAITTLFTAICALTQNDI 294
Cdd:PRK07691 220 atKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHdtSFTHYLILILALLTIIFGVIGAVAYFDI 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 295 KKIVAFSTSSQLGLMMVTIGINQPHL---AFLHICTHAFFKAMLFLCSGSIIHSLGdEQDIRKMGGLFKSLPFTTTALII 371
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIKITG-TTDLKKMGGLIKRYPVLGWMFFI 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 372 GSLALTGMPFLTGFYSKDLIIEtANTSYTNAWALLITLIaTSLTAVYST-RIIFFALLGKPRFpslILINENNPL--LTN 448
Cdd:PRK07691 379 AALSLAGIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLL-SSLLVLYSViKIFLKGFWGEPKG---YDLNNKVPVkkLLL 453
|
410
....*....|....
gi 2413964610 449 PITRLLIGSIFAGF 462
Cdd:PRK07691 454 PAVVLVAITILYGL 467
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
76-343 |
8.99e-18 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 86.63 E-value: 8.99e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 76 FKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWY 155
Cdd:PRK08601 68 WHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLNK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 156 GRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQifmlNLNNTTLPLMG----------LLLAATGKSAQFGL 225
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLTS----VLSNENLAQLGtwektginllLILAVMIPAAQWPF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 226 HPWLPSAMEGPTPVSALLHSStMVVAGIFLLIRFYPLVeNNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQ 305
Cdd:PRK08601 224 QRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLF-HDDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQ 301
|
250 260 270
....*....|....*....|....*....|....*...
gi 2413964610 306 LGLMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSII 343
Cdd:PRK08601 302 MGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
75-432 |
1.04e-16 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 82.95 E-value: 1.04e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 75 SFKLDFFSMVFMPVALFITWSIMEFSMWYMhSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWW 154
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYL-EDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALR 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 155 YGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIFMLNLNNTTLPL-----MGLLLAATG-KSAQFGLHPW 228
Cdd:PRK05777 147 RDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALADGSGNSLlllfgLVFLLVGLAfKLSAVPFHMW 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 229 LPSAMEG-PTPVSALLHSSTMVVA-GIFLLIRFYPLVENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQL 306
Cdd:PRK05777 227 TPDVYEGaPTPVTAFLATAPKIAAfAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 307 GLMMVTIGINQPH---LAFLHICTHAFFKAMLFLCSGSIIHSLGDEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLT 383
Cdd:PRK05777 307 GYLLVGLAAGTAEgysAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTA 386
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 2413964610 384 GFYSKDLIIETANTSytNAWAL-LITLIATSLTAVYSTRIIFFALLGKPR 432
Cdd:PRK05777 387 GFWGKFYVFEAAVEA--GLWWLaVIGVLNSAIGAFYYLRVIKLMYFDEPP 434
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
52-444 |
5.58e-16 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 80.85 E-value: 5.58e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 52 QSGQEMMISNWYWmtIQTMKLSLSFKLDFFSMVFMPVALFITwSIMEFSMWYMHSDPninRFFKYLLMFLVTMLILV-TA 130
Cdd:PRK12561 33 SSSSLQLVERYAW--LPQIGLEWSLGVDGLSMPLVLLSGLIT-TLSIFASWKVTRKP---RLFYFLMLVLYSAQIGVfLA 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 131 NNIFQLFIGWEGVGIMSFLLIGWWYGRaDANTAALQAILYNRIGDIgFILSMAWFMVNSNSWELQQIFMLNLNNTTLPL- 209
Cdd:PRK12561 107 QDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASI-FILVAGLALALSGDTFTFDLAELGAKSYPLALe 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 210 ----MGLLLAATGKSAQFGLHPWLPSAM-EGPTPVSallhsstMVVAGIFL------LIRF--YPLVENNKMIQTLALCL 276
Cdd:PRK12561 185 lllyAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyaLIRFnvQMLPDAHVYFAPALAIL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 277 GAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTI------GINQphlAFLHICTHAFFKAMLFLCSGSI---IHSLG 347
Cdd:PRK12561 258 GVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIaaftdlGISG---AMLQMISHGLIAAALFFLTGVTyerTHTLS 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 348 deqdIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSK-----DLIIETANTSYTNAWALLITLIATSLTAVY---S 419
Cdd:PRK12561 335 ----IPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSEltvflGITSSDVYSSTFRTITILLAAVGLILTPIYllsM 410
|
410 420
....*....|....*....|....*
gi 2413964610 420 TRIIFFAlLGKPRFPSLILINENNP 444
Cdd:PRK12561 411 LRRVFYG-PRSELLPALAVVEDAKP 434
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
106-418 |
2.58e-15 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 78.97 E-value: 2.58e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 106 SDPNINR-FFKYLLMFLVTMLIL--VTANNIFQLFIGWEGVGIMSFLLIGWWyGRADANTAALQAILYNRIGDIGFILS- 181
Cdd:PRK06473 99 SDESIQRpRFYYSLLLLLNAGVSgaFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGILILVSf 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 182 --MAWFMVNSN-SWELQQIFMLNLNNTTLPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLI 257
Cdd:PRK06473 178 lgLVWLSGASSfDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLL 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 258 RF--YPLVENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQP---HLAFLHICTHAFFK 332
Cdd:PRK06473 257 RFgvGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPlsiLAAVFQMISHGLIS 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 333 AMLFLCSGSIIHSLGdEQDIRKMGGLF---KSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYtnAWALLITL 409
Cdd:PRK06473 337 ALLFLLVGVVYKKTG-SRDVDVLRGLLnpeRGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIF--PVQTLLCM 413
|
....*....
gi 2413964610 410 IATSLTAVY 418
Cdd:PRK06473 414 IGTGLTAVY 422
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
219-417 |
3.26e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 78.26 E-value: 3.26e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 219 KSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFYPLVENNKMIQT---LALCLGAITTLFTAICALTQNDI 294
Cdd:PRK08676 219 KSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAEQfsnVLIGLGIFSIAVAAFSMLSQRNL 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 295 KKIVAFSTSSQLGLMMVTIGINQPHLAF---LHICTHAFFKAMLFLCSGsIIHSLGDEQDIRKMGGLFKSLPFTTTALII 371
Cdd:PRK08676 298 KKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVIL 376
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2413964610 372 GSLALTGMPFLTGFYSK-DLIIETANTSytnAWALLITLIATSLTAV 417
Cdd:PRK08676 377 GSAAIIGMPPFPLFLSKfFILLQLGGIS---VWLVLAVLLLLLLAAS 420
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
64-114 |
1.28e-14 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 68.22 E-value: 1.28e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2413964610 64 WMTIQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFF 114
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
205-418 |
5.71e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 74.62 E-value: 5.71e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 205 TTLPLMGLLLAATG-KSAQFGLHPWLP-SAMEGPTPVSA----LLhssTMVvaGIFLLIRFYPLVENNKMIQTLALCLGA 278
Cdd:PRK12665 207 TRTALFAVLLVAFGiKAAVFPLSFWLPdSYPTAPAPVTAvfagLL---TKV--GVYAIIRTHTLLFPGGGLDTLLMVVAL 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 279 ITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPH---LAFLHICTHAFFKAMLFLCSGsIIHSLGDEQDIRKM 355
Cdd:PRK12665 282 LTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRL 360
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2413964610 356 GGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIET-ANTSYTNAWALLITLIATSLTAVY 418
Cdd:PRK12665 361 GGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAgAEDGTWLAWALVAGGVVTSLLTLY 424
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
225-385 |
6.22e-14 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 74.86 E-value: 6.22e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 225 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKM-IQTLALCLGAITTLFTAICALTQNDIKKIVAFSTS 303
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLwWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTL 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 304 SQLGLMMVTIG-------INQPHLAFL-------HICTHAFFKAMLFLCSGSIIHSLGdEQDIRKMGGLFKSLPFTTTAL 369
Cdd:PRK08042 279 ENIGIILLGLGagvtgiaLEQPALIALglvgglyHLLNHSLFKSVLFLGAGSVWFRTG-HRDIEKLGGIGKKMPVISIAM 357
|
170
....*....|....*.
gi 2413964610 370 IIGSLALTGMPFLTGF 385
Cdd:PRK08042 358 LVGLMAMAALPPLNGF 373
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
9-418 |
7.94e-13 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 70.90 E-value: 7.94e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 9 MLSLIILtLPIMSA---------TNNHSYPQYAKTMIFYSFMASLPPTIMFTQSGQEMMISNwYWMTIQTMKLSLSFKLD 79
Cdd:PRK07363 1 MLSVLLW-LPILGAiiigffpgnLPSARLRQITLVFAVLVLAWSLFLLTQFDLSDPGMQFQE-YLPWNEPLGLSYSLGVD 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 80 FFSMVFMPVALFITWsIMEFSmwymhSDPNINR---FFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYG 156
Cdd:PRK07363 79 GLSLPLLVLNSLLTW-IAIYS-----IGENTERprlYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 157 RADAnTAALQAILYNRIGD---IGFILSMAWfMVNSNSWELQQIFMLNLN-NTTLPLMGLLLAATG-KSAQFGLHPWLPS 231
Cdd:PRK07363 153 EKRG-YASIKFLIYTAVSGllvLAAFLGIVW-LSGSTSFDYDAISTQNLSlNTQLILLTGLLLGFGiKIPLVPLHTWLPD 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 232 AMEGPTPVSALLHSSTMVVAGIFLLIRF----YPLVEnNKMIQTLALcLGAITTLFTAICALTQNDIKKIVAFSTSSQLG 307
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFglqlFPQTW-SLVAPGLAI-IGTISVIYGALSAIAQKDIKRMVAYSSIGHMG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 308 LMMVTIGINQPHL---AFLHICTHAFFKAMLFLCSGSIIHSLGdEQDIRKMGGLF---KSLPFTTTALIIGSLALTGMPF 381
Cdd:PRK07363 309 YILVAAAAGTQLSllgAVAQMISHGLILALLFHLVGIVERKVG-TRDLDVLNGLMnpiRGLPLTSALLVLAGMASAGIPG 387
|
410 420 430
....*....|....*....|....*....|....*..
gi 2413964610 382 LTGFYSKDLIIETANTSYtnAWALLITLIATSLTAVY 418
Cdd:PRK07363 388 LVGFVAEFIVFQGSFSTF--PIPTLLCIVASGLTAVY 422
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
117-395 |
1.38e-10 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 63.90 E-value: 1.38e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 117 LLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQ 196
Cdd:PRK06277 106 MLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLV-IASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITD 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 197 IFMLNLNNTTLP--LMGLLLAATGKSAQFGLHPW--LPSAM--EGPTPVSALLHS-STMVVAGIFLLI-RFYPLVENNKM 268
Cdd:PRK06277 185 IHNALLVNPTSPviYGGLLLLIFGLLYGSGLPPFhtIKSDIyaKAKPFGSALLQTfSKFVLVALMLVIfKLFGGLSYFPS 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 269 IQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPH---LAFLHICTHAFFKAMLFLCSGsIIHS 345
Cdd:PRK06277 265 AQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLgivAGIFHAINHVIYKSALFLGAG-IVSY 343
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2413964610 346 LGDEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETA 395
Cdd:PRK06277 344 RTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAA 393
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
190-393 |
8.29e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 60.61 E-value: 8.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 190 NSWELQQIFMLNLNNTTLPLMgLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLirfypLVENNKMI 269
Cdd:MTH00112 77 NAWNTGQWDITQLTNPTSCTL-LTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLL-----LMTSNSLN 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 270 QTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINqPHLAFLHICTHAFFKAMLFLcsgsIIHSLgDE 349
Cdd:MTH00112 151 PTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL----TLNTT-ST 224
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 2413964610 350 QDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIE 393
Cdd:MTH00112 225 KTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQ 268
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
75-388 |
2.60e-09 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 59.68 E-value: 2.60e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 75 SFKLDFFSMVFMPVALFITWSIMEFSMWYM-HSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGW 153
Cdd:PRK02504 73 SFNADNLSIAFRAIIALSTLVTLLMSWRYVeQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGY 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 154 WYGRADANTAALQAILYNRIGDIGFILSMAW-FMVNSNSWELQQIFMLNLNNTTLPL-MGLLLAATG---KSAQFGLHPW 228
Cdd:PRK02504 153 MKRDPRSNEAALKYLLIGAASSAIFLYGSSLlYGLSGGSTQLSAIALALITSPSLGLaLALVFVIAGiafKISAVPFHQW 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 229 LPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFyplvennkmiqtLALCLGAITT----LFTA----------ICALTQND 293
Cdd:PRK02504 233 TPDVYEGsPTPVVAFL-SVGSKAAGFALAIRL------------LVTAFPSFDEqwklLFTAlailsmvlgnVVALAQTS 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 294 IKKIVAFSTSSQLGLMMvtIGinqphlafLHICTHAFFKAMLF---------LC--SGSIIHSLGDEQD-IRKMGGLFKS 361
Cdd:PRK02504 300 MKRMLAYSSIGQAGFVM--IG--------LVAGTEAGYASMVFyllaylfmnLGafACVILFSLRTGTDqISDYAGLYQK 369
|
330 340
....*....|....*....|....*..
gi 2413964610 362 LPFTTTALIIGSLALTGMPFLTGFYSK 388
Cdd:PRK02504 370 DPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
115-392 |
2.72e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 59.94 E-value: 2.72e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 115 KYLLM-FLVTMLIL-------VTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSM-AWF 185
Cdd:MTH00226 127 KYLTKsFLICMLILefllyavFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLfSLY 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 186 MVNSNSWELQQI---FMLNLNNTTLPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAGIFLLIRFYP 261
Cdd:MTH00226 207 NIHGTTDYLTLAscsHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWP 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 262 LVE-NNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVT------IGINQPHLAFLhicTHAFFKAM 334
Cdd:MTH00226 287 ILPlGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITlvthdiIGLTGSIFIML---AHGIVSSL 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 2413964610 335 LFLCSgSIIHSLGDEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLII 392
Cdd:MTH00226 364 LFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSI 420
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
119-459 |
4.82e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 58.50 E-value: 4.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 119 MFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIF 198
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 199 M-----LNLNNTTLPLMGLLL--AATGKSAQFGLHPWLPSAMEG-PTPVSALLhsSTMVVAGIFLLIRFYPLVENNKMIq 270
Cdd:MTH00196 81 LvlnsgQSFSSVSVPIGYLLIivALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSILVSIGLNVNILLI- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 271 tlalcLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQphLAFLHIC-THAFFKAMLFLCSGSIIHSLGDE 349
Cdd:MTH00196 158 -----GGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGS--FESIQASlVYLFIYIIMSICVFSIILALNVY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 350 QD-IRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETAnTSYTNAWALLITLIATSLTAVYSTR---IIFF 425
Cdd:MTH00196 231 KNlIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSG-VVYQYYLIFLLAVFCSVIAGVYYVRivkILFF 309
|
330 340 350
....*....|....*....|....*....|....
gi 2413964610 426 ALLGKPRFPSLILINENNPLLTNPItrlLIGSIF 459
Cdd:MTH00196 310 QANSFLLISTKILKKENKINLRKAL---LIGFSL 340
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
57-388 |
6.96e-09 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 58.48 E-value: 6.96e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 57 MMISNWYWMTIQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMH-SDPNINRFFKYLLMFLVTMLILVTANNIFQ 135
Cdd:CHL00049 56 ITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLIT 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 136 LFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAW-FMVNSNSWELQQIF----MLNLNNTTLPLM 210
Cdd:CHL00049 136 IFVALECLSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVYGFSWlYGLSGGEIELQEIVngliNTQMYNSPGISI 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 211 GLLLAATG---KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFYPLV------ENNKMIQTLALClgaiT 280
Cdd:CHL00049 216 ALIFITVGigfKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRIFDIPfyfssnEWHLLLEILAIL----S 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 281 TLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLG---DEQDIRKMGG 357
Cdd:CHL00049 291 MILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFGlrtGTDNIRDYAG 370
|
330 340 350
....*....|....*....|....*....|.
gi 2413964610 358 LFKSLPFTTTALIIGSLALTGMPFLTGFYSK 388
Cdd:CHL00049 371 LYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
127-419 |
1.05e-08 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 58.03 E-value: 1.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 127 LVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADAnTAALQAILYNRIGDIGF---ILSMAWFMVNSNSWELQqifmlNLN 203
Cdd:CHL00011 128 LFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRL-YSATKFILYTAGGSIFLligVLGMGLYGSNEPTLNFE-----TLA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 204 NTTLPL-------MGLLLAATGKSAQFGLHPWLPSamegpTPVSAllHSST-MVVAGIFLLIRFYPLVENNKMIQTLA-- 273
Cdd:CHL00011 202 NQSYPValeilfyIGFLIAYAVKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMGAYGLIRINMELLPHAhs 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 274 ------LCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIG-INQPHL--AFLHICTHAFFKAMLFLCSGSI-- 342
Cdd:CHL00011 275 ifspwlVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGsITDTGLngAILQIISHGFIGAALFFLAGTSyd 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 343 -IHSLGDEQdirkMGGLFKSLP--FTT-TALIIGSLALTGMpflTGFYSKDLIIETANTS--YTNAWALLITL---IATS 413
Cdd:CHL00011 355 rIRLVYLDE----MGGIAIPMPkiFTMfSSFSMASLALPGM---SGFVAELIVFFGIITSqkYLLMPKILITFvmaIGMI 427
|
....*.
gi 2413964610 414 LTAVYS 419
Cdd:CHL00011 428 LTPIYL 433
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
72-417 |
1.02e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 54.71 E-value: 1.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 72 LSLSFKLDFFSMVFMPVALFITwSIMEFSMWYMHSDPninRFFKYLLMFLVTMLILVTA-NNIFQLFIGWEGVGIMSFLL 150
Cdd:PRK02546 79 LTWSVGADGLSMPLILLTGFIT-TLAVLAAWPVTFKP---KLFYFLMLAMYGGQIAVFAvQDMLLFFLAWELELIPVYLL 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 151 IGWWYGRaDANTAALQAILYNRIGDIgFIL----SMAwFMVNSNSWELQQI----FMLNLNNttLPLMGLLLAATGKSAQ 222
Cdd:PRK02546 155 LAIWGGK-KRQYAATKFILYTAGSSL-FILlaalAMA-FYGDTPTFDMTALaakdFGLGFQL--LCYAGLLIAYGVKLPI 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 223 FGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFLLIRFYPLVENN--------KMIQTLALCLGAITTLFTAICALTQND 293
Cdd:PRK02546 230 VPLHTWLPDAHgEATAPVHMLL-------AGILLKMGGYALLRMNagmlpdahAQFAPLLIVLGVVNIIYAALTSFAQRN 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 294 IKKIVAFSTSSQLGLMMVTIGINQP---HLAFLHICTHAFFKAMLFLCSGSI---IHSLgdeqDIRKMGGLFKSLP---- 363
Cdd:PRK02546 303 LKRKIAYSSISHMGFVLIGIGSFTDlgtSGAMLQMISHGLIGASLFFLVGATydrTHTL----MLDEMGGVGQKMRkmfa 378
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2413964610 364 -FTTTALiiGSLALTGMpflTGFYSKDLIIETANTSytNAWALLITLIATSLTAV 417
Cdd:PRK02546 379 mWTACSL--ASLALPGM---SGFVAELMVFVGFATS--DAYTLPFRVVVVFLAAV 426
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
6-385 |
3.05e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 53.14 E-value: 3.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 6 TLMMLSLIILTLPIMSATNNHSYpQYAKTMIFYS---FMASLPPTIMFTQSGQEMMISNWYWMTIQTMKL---SLSFKLD 79
Cdd:MTH00204 4 SLIFLILFMGIINVMGVPRENSV-KLKKRALEWSlaiLFSTLVLWGAFDGEGQFQFINLIEWIISPTLNFqwgPLVFAVD 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 80 FFSMVFM-------PVALFITWSIMEFsmwymhsdpnINRFFKYLLMFLVTMLILV-TANNIFQLFIGWEGVGIMSFLLI 151
Cdd:MTH00204 83 GVSLFFIllttlliPICILISWKSIKF----------LFKEFLLCLLFLEVLLIGVfSVLDLLLFYILFEGILIPMFLLI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 152 GWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQqifmlNLNNTTLP-------LMGLLLAATGKSAQFG 224
Cdd:MTH00204 153 GIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQ-----ILLNIKLPlsiqkwlLVGFFLSLAVKIPQIP 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 225 LHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LIRF-YPLV-ENNKMIQTLALCLGAITTLFTAICALTQNDIK 295
Cdd:MTH00204 228 FHIWLPQAhVEAPVAGSVIL-------AGILLklggygFLRFsWPLFpAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFK 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 296 KIVAFSTSSQLGLmmVTIGINQPHL-----AFLHICTHAFFKAMLFLCSgSIIHSLGDEQDIRKMGGLFKSLPFTTTALI 370
Cdd:MTH00204 301 RLIAYSSVAHMGL--VPLGLFTHTIeglvaAVFLMLAHGFVSSALFIAV-TFLYERHHTRLIKYYRGLTLTMPLFVIIML 377
|
410
....*....|....*
gi 2413964610 371 IGSLALTGMPFLTGF 385
Cdd:MTH00204 378 VLSLANMGFPLSCNF 392
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
12-419 |
3.87e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 52.63 E-value: 3.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 12 LIILTLPIMSATNNHSYPQYAKTMIFYSFMASLPPTIMFTQSGQEMMISnwywmtiqtmkLSLSFKLDFFSMVFMPVALF 91
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSF-----------SNLYLSYDPLSSPLVILSCW 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 92 ITWSIMEFSMWYMHSDPNIN-RFFKYLLMFLVTMLILV-TANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAIL 169
Cdd:MTH00206 71 LLPLMFLASQNHMKNEPINRqRIYITLLIVLQLFLILFfSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLF 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 170 YNRIGDIGFILSMAW--FMVNSNSWELQQIFMLNLNNTTLPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTpvsallhSS 246
Cdd:MTH00206 151 YTLIGSLPLLIALLFlqNSLGSLSLYILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAhVEAPV-------AG 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 247 TMVVAGIFL------LIRFYPLVEN-NKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQP- 318
Cdd:MTH00206 224 SMVLAGVLLklggygMMRIILILGPsTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPw 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 319 --HLAFLHICTHAFFKAMLFlCSGSIIHSLGDEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIetAN 396
Cdd:MTH00206 304 gfKGALLLMIAHGLVSSALF-CLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLII--TS 380
|
410 420
....*....|....*....|...
gi 2413964610 397 TSYTNAWALLITLIATSLTAVYS 419
Cdd:MTH00206 381 LFSWSNFTLPLLGLGFLFTAIYS 403
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
117-465 |
7.14e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 51.51 E-value: 7.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 117 LLMFLVTMLILvTANNIFQLFIGWEgVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQ 196
Cdd:MTH00200 11 LSLGLGTLLTF-SSSHWFLIWLGLE-INTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISE 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 197 ifMLNLNNTTLPLMGLLLaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMiqtlaLCL 276
Cdd:MTH00200 89 --MLGPLSETLILLALAL----KLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNIL-----LLL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 277 GAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINqPHLAFLHicthaFFKAMLFLCSGSIIHSLGDEQDIRKMG 356
Cdd:MTH00200 158 GLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLY-----LLLYVIITLTVFLLLNLLNSTKINSLS 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 357 GLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIeTANTSYTNAWALLITLIATSLTAVYSTRIIFFALLGKPRFPSL 436
Cdd:MTH00200 232 SSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-QELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQIN 310
|
330 340
....*....|....*....|....*....
gi 2413964610 437 ILINENNPLLTNPITRLLIGSIFAGFLIS 465
Cdd:MTH00200 311 MMSSWRTKSNSNLLVGLLLLLSILGLPLT 339
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
50-315 |
1.96e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 50.44 E-value: 1.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 50 FTQSGQEMMISNWYWM-TIQTMKLSLSFKLDFFSMVFM-------PVALFITWSIMEFSmwymhsdpnINRFFKYLLMFL 121
Cdd:MTH00217 49 FDGEGQFQAIKKFEWIpGIEPVFGPVVFAVDGISIFFLiltalltPICILISWNSIKFL---------IKEFLLCLLVIE 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 122 VTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIFMLN 201
Cdd:MTH00217 120 ILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLK 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 202 LNNTT--LPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LIRF-YPLV-ENNKMIQ 270
Cdd:MTH00217 200 IEKELqyFIFLGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVIL-------AGVLLklggygFIRFsWPLLpEASEYFS 272
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 2413964610 271 TLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLmmVTIGI 315
Cdd:MTH00217 273 PLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGL--VTLGI 315
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
57-313 |
2.20e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 50.54 E-value: 2.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 57 MMISNWYWMTIQTMKLSLSFKLDFFSMVFMPVALFITwSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILV-TANNIFQ 135
Cdd:MTH00163 33 FLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWIC-MLMILSSESVYKKNNYSNLFLFLILFLLIFLLLTfSSMNLLL 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 136 LFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWELQQIFMLNLNNTTLPLMgLLLA 215
Cdd:MTH00163 112 FYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLNFFGSLNFLWYLS-MILA 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 216 ATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRFYPLVEN-NKMIQTLALCLGAITTLFTAIC 287
Cdd:MTH00163 191 FLVKMPMFFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLLRVMSFFSKlGLKFNYIWISISLVGGVIVSLI 263
|
250 260
....*....|....*....|....*.
gi 2413964610 288 ALTQNDIKKIVAFSTSSQLGLMMVTI 313
Cdd:MTH00163 264 CLRQVDLKSLIAYSSVAHMGLVLGGL 289
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
72-314 |
5.21e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 49.40 E-value: 5.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 72 LSLSFKLDFFSMVFMPVALFITWsimeFSMWYMHSDpninRFFKYLLMFLV-TMLILVTANNIFQLFIGWEGVGIMSFLL 150
Cdd:PRK06459 40 YEYNGVLSFFSIISTIVWILASL----YSIEYDHYG----KWLSSLYILTIlGMAIVLTSDNYLLFLAGWEIMTIPSYVA 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 151 IGWWygrADANTAALQAILYNRIGDIGFILSMAWFMVNSNSwelqqiFMLNLNNTTLPLMGLLLAATGKSAQFGLH--PW 228
Cdd:PRK06459 112 IALT---KKNKRPAFVFMAFGELSTVLILAGFAWAFIISGT------TNFSYLPSPVPLILASFGFIIKMGMMPFLvsEW 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 229 LPSAM-EGPTPVSALLhSSTMVVAGIFLLIRFYPLVENNKM--IQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQ 305
Cdd:PRK06459 183 LPIAHgNAPSNFSAIL-SATMTLMGVYGILKMTILTQTIPIgyFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIEN 261
|
....*....
gi 2413964610 306 LGLMMVTIG 314
Cdd:PRK06459 262 NGAILVALG 270
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
274-401 |
1.05e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 48.19 E-value: 1.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 274 LCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPH-----LAFLHICTHAFFKAMLFLCSGSIIHSLGd 348
Cdd:PRK12664 205 LFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINRTR- 283
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2413964610 349 EQDIRKMGGLFKsLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSYTN 401
Cdd:PRK12664 284 KFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLT 335
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
61-317 |
7.75e-05 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 45.50 E-value: 7.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 61 NWYWMTIQTMKLSLSFKLDFFSMVFMPVALFITWSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGW 140
Cdd:MTH00014 40 NLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFF 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 141 EGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMVNSNSWelqQIFMLNLNNTTLPLMGL-----LLA 215
Cdd:MTH00014 120 EASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSL---SMLMSSMEPPSIYLMNLwwlitILA 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 216 ATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRF-YPLVENNKMIQTLALCLGAITTLFTAIC 287
Cdd:MTH00014 197 FMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygLLRMsSLFMHINKSLSAPFSSISLVGAVITSLI 269
|
250 260 270
....*....|....*....|....*....|
gi 2413964610 288 ALTQNDIKKIVAFSTSSQLGLMMVTIGINQ 317
Cdd:MTH00014 270 CIRQPDLKSLIAYSSVGHMGLMTAGIMSNT 299
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
72-309 |
2.76e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 43.67 E-value: 2.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 72 LSLSFKLDFFSMVFMPVALFITwSIMEFSMWYMHSDPNINRFFKYLLMFLVTMLILV-TANNIFQLFIGWEGVGIMSFLL 150
Cdd:MTH00150 16 LSELFSVDSMSSLLISLSLWIS-GLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAfSVSSLLMFYFFFEASLIPTLLL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 151 IGWWYGRADAntaaLQAILYNRIGDIG------FILSMAWFMVNSNSWELqqIFMLNLNNTTLPLMGLL--LAATGKSAQ 222
Cdd:MTH00150 95 ILGWGYQPER----LQAGMYMMLYTVGaslpllLVILWMSSSYGSSFMLL--ISSLRKLLSSMGLWGLLvfLAFLVKLPM 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 223 FGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRFYPLVE-NNKMIQTLALCLGAITTLFTAICALTQNDI 294
Cdd:MTH00150 169 YPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSlSSSSFSIFLISLSLWGGVLTSLICLRQSDV 241
|
250
....*....|....*
gi 2413964610 295 KKIVAFSTSSQLGLM 309
Cdd:MTH00150 242 KSLIAYSSVGHMSLV 256
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
190-393 |
3.11e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 43.37 E-value: 3.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 190 NSWELQQIFMLNLNnTTLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMI 269
Cdd:MTH00070 77 NAWFTGEWTIMNMQ-TPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLI 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 270 qtlalCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINqPHLAFLH-----ICTHAFFKAMLFLCSGSIih 344
Cdd:MTH00070 156 -----IMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNlliylIMTSSMFLMLMNLNSTNI-- 227
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 2413964610 345 slgdeqdiRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIE 393
Cdd:MTH00070 228 --------NKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLILQ 268
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
9-309 |
8.77e-04 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 42.27 E-value: 8.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 9 MLSLIILTLPIMSAT----NNHSYPqyakTMIFYSFMASLPPTIMFTQSGQemmiSNWYWMTIQTMKLSLSFKLDFFSMV 84
Cdd:MTH00044 1 MITLILLSLGIAITSwivpKNKLWP----ISISQSSLISLLSLFLLNNHWS----SSWHNLSLSLATDSLSSPLIILSCW 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 85 FMPVALFITWSIMEFsmwymHSDPNINRFFKYLLMFLVTMLILVTANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAA 164
Cdd:MTH00044 73 LAPLSLLASINHLSN-----NSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAG 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 165 LQAILYNRIGDIGFILSMAWFMVNSNSWELQQIFMLNLNNTTLPLMGL-----LLAATGKSAQFGLHPWLPSA-MEGPTP 238
Cdd:MTH00044 148 LYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIwwifcILAFLVKMPIYGFHLWLPKAhVEAPVA 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 239 VSallhsstMVVAGIFL------LIR-----FYPLVENNKMIQTLALCLGAittLFTAICALTQNDIKKIVAFSTSSQLG 307
Cdd:MTH00044 228 GS-------MILAAILLklggygLIRlinlfSLPSANNISFILIVFCCWGA---LITSIICLRQTDLKALIAYSSVGHMS 297
|
..
gi 2413964610 308 LM 309
Cdd:MTH00044 298 LV 299
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
197-418 |
1.70e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 41.02 E-value: 1.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 197 IFMLNLNNTTLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLVENNKMIqtlaLCL 276
Cdd:MTH00144 75 LIMYNLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLL----CVI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 277 GAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFLCSGSIIHSLgdeqdirKMG 356
Cdd:MTH00144 151 SVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSM-------KDL 223
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2413964610 357 GLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETANTSytNAWALLITLIATSLTAVY 418
Cdd:MTH00144 224 GSLKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMES--SPLLLILLLLLGSLISLF 283
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
226-484 |
2.27e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 40.77 E-value: 2.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 226 HPWLPSAMEG-PTPVSALLhsSTMVVAGIFllirfYPLVENNKMIQTLALClGAITTLFTAICALTQNDIKKIVAFSTSS 304
Cdd:MTH00199 210 HMWAPDVYEGaPTITTALL--ATVPKIGVF-----SILVQIGPVTNVVLIC-AVLSIIYGAIGALNQTKIKRLLAYSGIG 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 305 QLGLMMVTIGIN-----QPHLAFLHIcthaffKAMLFLCSGSIIHSLGDEQD-IRKMGGLFKSLPFTTTALIIGSLALTG 378
Cdd:MTH00199 282 HMGFILFGVAIGsfesiQASLIYMII------YVIMSICSFSIILSLKLTKGlIVEVSGLSRKNPVIALTLALTFLSIAG 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 379 MPFLTGFYSKDLIIETANTSytNAWALLITLIATSLTA-VYSTR---IIFFALLGKPRFPSLILINENNPLLTNPItrlL 454
Cdd:MTH00199 356 IPPLAGFLSKWLILLSGVSS--GYYLICIIAVLSSVIAgVYYVRvvqIIYFQADYSILIWQKVLKKEERLDLSKSI---L 430
|
250 260 270
....*....|....*....|....*....|
gi 2413964610 455 IGsIFAGFLISNNITPSTVPQMTMPLYIKL 484
Cdd:MTH00199 431 IG-VTFFIILFLMISPNFLLQITHDATISL 459
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
109-419 |
2.33e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 40.71 E-value: 2.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 109 NINRFFKYLLMFLVTMLILV-TANNIFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAILYNRIGDIGFILSMAWFMV 187
Cdd:MTH00127 91 NRQRMYITLLTSLQIFLILAfGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQN 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 188 NSNSWEL-----QQIFMLNLNNTTLPLMGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAGIFLLIRFYP 261
Cdd:MTH00127 171 STGTLSMltlqySQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAhVEAPIAGSMVLAAVLLKLGGYGMMRMMVM 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 262 LVENNKMIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHL---AFLHICTHAFFKAMLFlC 338
Cdd:MTH00127 251 LDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGftgALILMIAHGLTSSALF-C 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 339 SGSIIHSLGDEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETA-NTSYtnaWALLITLIATSLTAV 417
Cdd:MTH00127 330 LANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLfNWSP---WTLALTGLGTLITAG 406
|
..
gi 2413964610 418 YS 419
Cdd:MTH00127 407 YS 408
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
188-418 |
3.58e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 39.91 E-value: 3.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 188 NSNSWelqqifMLNLNNTTLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFyplveNNK 267
Cdd:MTH00041 80 LSGSW------SINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISI-----SNL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2413964610 268 MIQTLALCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINqPHLAFLHICTHAFFKAMLFLcsgsiIHSLG 347
Cdd:MTH00041 149 LNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYS-PNASIIMFLIYIIINTSIFL-----IGNNF 222
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2413964610 348 DEQDIRKMGGLFKSLPFTTTALIIGSLALTGMPFLTGFYSKDLIIETanTSYTNAWALLITLIATSLTAVY 418
Cdd:MTH00041 223 SLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYC--LIQNNSILISIILIIGSLLSLF 291
|
|
| |
