NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2563495931|gb|WLU66876|]
View 

nicotinate-nucleotide adenylyltransferase [Brucella abortus]

Protein Classification

nicotinate-nucleotide adenylyltransferase( domain architecture ID 10011203)

nicotinate-nucleotide adenylyltransferase catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide

EC:  2.7.7.18
Gene Ontology:  GO:0004515|GO:0005524|GO:0009435
PubMed:  19273075
SCOP:  4003834

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
nadD PRK00071
nicotinate-nucleotide adenylyltransferase;
28-221 1.61e-77

nicotinate-nucleotide adenylyltransferase;


:

Pssm-ID: 234611 [Multi-domain]  Cd Length: 203  Bit Score: 231.65  E-value: 1.61e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931  28 EKGMTVGLFGGSFNPPHGGHALVAEIAIRRLKLDQLWWMVTPGNPLKDSRELAPLSERLRLSEEVAED-PRIKVTALEAA 106
Cdd:PRK00071    1 EMMKRIGLFGGTFDPPHYGHLAIAEEAAERLGLDEVWFLPNPGPPHKPQKPLAPLEHRLAMLELAIADnPRFSVSDIELE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931 107 FH-VRYTADTLALIRNANPDVYFVWVMGADNLASFHRWQRWREIAQNFPIAIIDRPGSTLSYLSSRMAQTFsdsrldery 185
Cdd:PRK00071   81 RPgPSYTIDTLRELRARYPDVELVFIIGADALAQLPRWKRWEEILDLVHFVVVPRPGYPLEALALPALQQL--------- 151
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 2563495931 186 apvlaRRMPPAWTFIHGPRSSLSSTALRKVQLKKAP 221
Cdd:PRK00071  152 -----LEAAGAITLLDVPLLAISSTAIRERIKEGRP 182
 
Name Accession Description Interval E-value
nadD PRK00071
nicotinate-nucleotide adenylyltransferase;
28-221 1.61e-77

nicotinate-nucleotide adenylyltransferase;


Pssm-ID: 234611 [Multi-domain]  Cd Length: 203  Bit Score: 231.65  E-value: 1.61e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931  28 EKGMTVGLFGGSFNPPHGGHALVAEIAIRRLKLDQLWWMVTPGNPLKDSRELAPLSERLRLSEEVAED-PRIKVTALEAA 106
Cdd:PRK00071    1 EMMKRIGLFGGTFDPPHYGHLAIAEEAAERLGLDEVWFLPNPGPPHKPQKPLAPLEHRLAMLELAIADnPRFSVSDIELE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931 107 FH-VRYTADTLALIRNANPDVYFVWVMGADNLASFHRWQRWREIAQNFPIAIIDRPGSTLSYLSSRMAQTFsdsrldery 185
Cdd:PRK00071   81 RPgPSYTIDTLRELRARYPDVELVFIIGADALAQLPRWKRWEEILDLVHFVVVPRPGYPLEALALPALQQL--------- 151
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 2563495931 186 apvlaRRMPPAWTFIHGPRSSLSSTALRKVQLKKAP 221
Cdd:PRK00071  152 -----LEAAGAITLLDVPLLAISSTAIRERIKEGRP 182
TIGR00482 TIGR00482
nicotinate (nicotinamide) nucleotide adenylyltransferase; This model represents the ...
35-214 1.62e-54

nicotinate (nicotinamide) nucleotide adenylyltransferase; This model represents the predominant bacterial/eukaryotic adenylyltransferase for nicotinamide-nucleotide, its deamido form nicotinate nucleotide, or both. The first activity, nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), synthesizes NAD by the salvage pathway, while the second, nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) synthesizes the immediate precursor of NAD by the de novo pathway. In E. coli, NadD activity is biased toward the de novo pathway while salvage activity is channeled through the multifunctional NadR protein, but this division of labor may be exceptional. The given name of this model, nicotinate (nicotinamide) nucleotide adenylyltransferase, reflects the lack of absolute specificity with respect to substrate amidation state in most species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]


Pssm-ID: 273101 [Multi-domain]  Cd Length: 193  Bit Score: 172.89  E-value: 1.62e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931  35 LFGGSFNPPHGGHALVAEIAIRRLKLDQLWWMVTPGNPLKDSRELAPLSERLRLSEEVAED-PRIKVTALEAAFH-VRYT 112
Cdd:TIGR00482   1 LFGGSFDPIHYGHLLLAEEALDHLDLDKVIFVPTANPPHKKTYEAASSHHRLAMLKLAIEDnPKFEVDDFEIKRGgPSYT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931 113 ADTLALIRNANPDVYFVWVMGADNLASFHRWQRWREIAQNFPIAIIDRPGSTlsylssrmaqtfsdsrLDERYAPVLARR 192
Cdd:TIGR00482  81 IDTLKHLKKKYPDVELYFIIGADALRSFPLWKDWQELLELVHLVIVPRPGYT----------------LDKALLEKAILR 144
                         170       180
                  ....*....|....*....|...
gi 2563495931 193 MP-PAWTFIHGPRSSLSSTALRK 214
Cdd:TIGR00482 145 MHhGNLTLLHNPRVPISSTEIRQ 167
NadD COG1057
Nicotinate-nucleotide adenylyltransferase NadD [Coenzyme transport and metabolism]; ...
31-214 5.72e-45

Nicotinate-nucleotide adenylyltransferase NadD [Coenzyme transport and metabolism]; Nicotinate-nucleotide adenylyltransferase NadD is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 440677 [Multi-domain]  Cd Length: 197  Bit Score: 148.73  E-value: 5.72e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931  31 MTVGLFGGSFNPPHGGHALVAEIAIRRLKLDQLWWMVTPGNPLKDSRELAPLSERLRLSEE-VAEDPRIKVTALEaaFH- 108
Cdd:COG1057     2 MRIGIFGGTFDPIHIGHLALAEEAAEQLGLDEVIFVPAGQPPHKKHKPLASAEHRLAMLRLaIADNPRFEVSDIE--LEr 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931 109 --VRYTADTLALIRNANPDVYFVWVMGADNLASFHRWQRWREIAQNFPIAIIDRPGSTLSYLSSRmaqtfsdsrldERYA 186
Cdd:COG1057    80 pgPSYTIDTLRELREEYPDAELYFIIGADALLQLPKWKRWEELLELAHLVVVPRPGYELDELEEL-----------EALK 148
                         170       180
                  ....*....|....*....|....*...
gi 2563495931 187 PvlarrmPPAWTFIHGPRSSLSSTALRK 214
Cdd:COG1057   149 P------GGRIILLDVPLLDISSTEIRE 170
NMNAT cd02165
Nicotinamide/nicotinate mononucleotide adenylyltransferase; Nicotinamide/nicotinate ...
33-214 4.45e-38

Nicotinamide/nicotinate mononucleotide adenylyltransferase; Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis.


Pssm-ID: 185680 [Multi-domain]  Cd Length: 192  Bit Score: 130.83  E-value: 4.45e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931  33 VGLFGGSFNPPHGGHALVAEIAIRRLKLDQLWWMVTPGNPLKDSrELAPLSERLRLSEEVAED-PRIKVTALEAAF-HVR 110
Cdd:cd02165     1 IALFGGSFDPPHLGHLAIAEEALEELGLDRVLLLPSANPPHKPP-KPASFEHRLEMLKLAIEDnPKFEVSDIEIKRdGPS 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931 111 YTADTLALIRNANPDVYFVWVMGADNLASFHRWQRWREIAQNFPIAIIDRPGSTLSYLSSRMAQTFSDSrlderyapvla 190
Cdd:cd02165    80 YTIDTLEELRERYPNAELYFIIGSDNLIRLPKWYDWEELLSLVHLVVAPRPGYPIEDASLEKLLLPGGR----------- 148
                         170       180
                  ....*....|....*....|....
gi 2563495931 191 rrmppaWTFIHGPRSSLSSTALRK 214
Cdd:cd02165   149 ------IILLDNPLLNISSTEIRE 166
CTP_transf_like pfam01467
Cytidylyltransferase-like; This family includes: Cholinephosphate cytidylyltransferase; ...
35-161 2.54e-21

Cytidylyltransferase-like; This family includes: Cholinephosphate cytidylyltransferase; glycerol-3-phosphate cytidylyltransferase. It also includes putative adenylyltransferases, and FAD synthases.


Pssm-ID: 396172 [Multi-domain]  Cd Length: 134  Bit Score: 85.83  E-value: 2.54e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931  35 LFGGSFNPPHGGHALVAEIAIRRLKLDqLWWMVTPGNPL-KDSRELAPLSERLRLSEEVAEDPRIKVTALEAAfhvryta 113
Cdd:pfam01467   1 LFGGTFDPIHLGHLRLLEQAKELFDED-LIVGVPSDEPPhKLKRPLFSAEERLEMLELAKWVDEVIVVAPWEL------- 72
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2563495931 114 dTLALIRNANPDvyfVWVMGADNLASFhrWQRWREIAQNFPIAIIDRP 161
Cdd:pfam01467  73 -TRELLKELNPD---VLVIGADSLLDF--WYELDEILGNVKLVVVVRP 114
 
Name Accession Description Interval E-value
nadD PRK00071
nicotinate-nucleotide adenylyltransferase;
28-221 1.61e-77

nicotinate-nucleotide adenylyltransferase;


Pssm-ID: 234611 [Multi-domain]  Cd Length: 203  Bit Score: 231.65  E-value: 1.61e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931  28 EKGMTVGLFGGSFNPPHGGHALVAEIAIRRLKLDQLWWMVTPGNPLKDSRELAPLSERLRLSEEVAED-PRIKVTALEAA 106
Cdd:PRK00071    1 EMMKRIGLFGGTFDPPHYGHLAIAEEAAERLGLDEVWFLPNPGPPHKPQKPLAPLEHRLAMLELAIADnPRFSVSDIELE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931 107 FH-VRYTADTLALIRNANPDVYFVWVMGADNLASFHRWQRWREIAQNFPIAIIDRPGSTLSYLSSRMAQTFsdsrldery 185
Cdd:PRK00071   81 RPgPSYTIDTLRELRARYPDVELVFIIGADALAQLPRWKRWEEILDLVHFVVVPRPGYPLEALALPALQQL--------- 151
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 2563495931 186 apvlaRRMPPAWTFIHGPRSSLSSTALRKVQLKKAP 221
Cdd:PRK00071  152 -----LEAAGAITLLDVPLLAISSTAIRERIKEGRP 182
TIGR00482 TIGR00482
nicotinate (nicotinamide) nucleotide adenylyltransferase; This model represents the ...
35-214 1.62e-54

nicotinate (nicotinamide) nucleotide adenylyltransferase; This model represents the predominant bacterial/eukaryotic adenylyltransferase for nicotinamide-nucleotide, its deamido form nicotinate nucleotide, or both. The first activity, nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), synthesizes NAD by the salvage pathway, while the second, nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) synthesizes the immediate precursor of NAD by the de novo pathway. In E. coli, NadD activity is biased toward the de novo pathway while salvage activity is channeled through the multifunctional NadR protein, but this division of labor may be exceptional. The given name of this model, nicotinate (nicotinamide) nucleotide adenylyltransferase, reflects the lack of absolute specificity with respect to substrate amidation state in most species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]


Pssm-ID: 273101 [Multi-domain]  Cd Length: 193  Bit Score: 172.89  E-value: 1.62e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931  35 LFGGSFNPPHGGHALVAEIAIRRLKLDQLWWMVTPGNPLKDSRELAPLSERLRLSEEVAED-PRIKVTALEAAFH-VRYT 112
Cdd:TIGR00482   1 LFGGSFDPIHYGHLLLAEEALDHLDLDKVIFVPTANPPHKKTYEAASSHHRLAMLKLAIEDnPKFEVDDFEIKRGgPSYT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931 113 ADTLALIRNANPDVYFVWVMGADNLASFHRWQRWREIAQNFPIAIIDRPGSTlsylssrmaqtfsdsrLDERYAPVLARR 192
Cdd:TIGR00482  81 IDTLKHLKKKYPDVELYFIIGADALRSFPLWKDWQELLELVHLVIVPRPGYT----------------LDKALLEKAILR 144
                         170       180
                  ....*....|....*....|...
gi 2563495931 193 MP-PAWTFIHGPRSSLSSTALRK 214
Cdd:TIGR00482 145 MHhGNLTLLHNPRVPISSTEIRQ 167
NadD COG1057
Nicotinate-nucleotide adenylyltransferase NadD [Coenzyme transport and metabolism]; ...
31-214 5.72e-45

Nicotinate-nucleotide adenylyltransferase NadD [Coenzyme transport and metabolism]; Nicotinate-nucleotide adenylyltransferase NadD is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 440677 [Multi-domain]  Cd Length: 197  Bit Score: 148.73  E-value: 5.72e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931  31 MTVGLFGGSFNPPHGGHALVAEIAIRRLKLDQLWWMVTPGNPLKDSRELAPLSERLRLSEE-VAEDPRIKVTALEaaFH- 108
Cdd:COG1057     2 MRIGIFGGTFDPIHIGHLALAEEAAEQLGLDEVIFVPAGQPPHKKHKPLASAEHRLAMLRLaIADNPRFEVSDIE--LEr 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931 109 --VRYTADTLALIRNANPDVYFVWVMGADNLASFHRWQRWREIAQNFPIAIIDRPGSTLSYLSSRmaqtfsdsrldERYA 186
Cdd:COG1057    80 pgPSYTIDTLRELREEYPDAELYFIIGADALLQLPKWKRWEELLELAHLVVVPRPGYELDELEEL-----------EALK 148
                         170       180
                  ....*....|....*....|....*...
gi 2563495931 187 PvlarrmPPAWTFIHGPRSSLSSTALRK 214
Cdd:COG1057   149 P------GGRIILLDVPLLDISSTEIRE 170
NMNAT cd02165
Nicotinamide/nicotinate mononucleotide adenylyltransferase; Nicotinamide/nicotinate ...
33-214 4.45e-38

Nicotinamide/nicotinate mononucleotide adenylyltransferase; Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis.


Pssm-ID: 185680 [Multi-domain]  Cd Length: 192  Bit Score: 130.83  E-value: 4.45e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931  33 VGLFGGSFNPPHGGHALVAEIAIRRLKLDQLWWMVTPGNPLKDSrELAPLSERLRLSEEVAED-PRIKVTALEAAF-HVR 110
Cdd:cd02165     1 IALFGGSFDPPHLGHLAIAEEALEELGLDRVLLLPSANPPHKPP-KPASFEHRLEMLKLAIEDnPKFEVSDIEIKRdGPS 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931 111 YTADTLALIRNANPDVYFVWVMGADNLASFHRWQRWREIAQNFPIAIIDRPGSTLSYLSSRMAQTFSDSrlderyapvla 190
Cdd:cd02165    80 YTIDTLEELRERYPNAELYFIIGSDNLIRLPKWYDWEELLSLVHLVVAPRPGYPIEDASLEKLLLPGGR----------- 148
                         170       180
                  ....*....|....*....|....
gi 2563495931 191 rrmppaWTFIHGPRSSLSSTALRK 214
Cdd:cd02165   149 ------IILLDNPLLNISSTEIRE 166
CTP_transf_like pfam01467
Cytidylyltransferase-like; This family includes: Cholinephosphate cytidylyltransferase; ...
35-161 2.54e-21

Cytidylyltransferase-like; This family includes: Cholinephosphate cytidylyltransferase; glycerol-3-phosphate cytidylyltransferase. It also includes putative adenylyltransferases, and FAD synthases.


Pssm-ID: 396172 [Multi-domain]  Cd Length: 134  Bit Score: 85.83  E-value: 2.54e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931  35 LFGGSFNPPHGGHALVAEIAIRRLKLDqLWWMVTPGNPL-KDSRELAPLSERLRLSEEVAEDPRIKVTALEAAfhvryta 113
Cdd:pfam01467   1 LFGGTFDPIHLGHLRLLEQAKELFDED-LIVGVPSDEPPhKLKRPLFSAEERLEMLELAKWVDEVIVVAPWEL------- 72
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2563495931 114 dTLALIRNANPDvyfVWVMGADNLASFhrWQRWREIAQNFPIAIIDRP 161
Cdd:pfam01467  73 -TRELLKELNPD---VLVIGADSLLDF--WYELDEILGNVKLVVVVRP 114
nadD PRK07152
nicotinate-nucleotide adenylyltransferase;
31-160 3.49e-21

nicotinate-nucleotide adenylyltransferase;


Pssm-ID: 235947 [Multi-domain]  Cd Length: 342  Bit Score: 89.62  E-value: 3.49e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931  31 MTVGLFGGSFNPPHGGHALVAEIAIRRLKLDQLWWMVTPGNPLKDSRELAPLSERLRLSEEVAED-PRIKVTALE-AAFH 108
Cdd:PRK07152    1 MKIAIFGGSFDPIHKGHINIAKKAIKKLKLDKLFFVPTYINPFKKKQKASNGEHRLNMLKLALKNlPKMEVSDFEiKRQN 80
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2563495931 109 VRYTADTLALI--RNANPDVYFvwVMGADNLASFHRWQRWREIAQNFPIAIIDR 160
Cdd:PRK07152   81 VSYTIDTIKYFkkKYPNDEIYF--IIGSDNLEKFKKWKNIEEILKKVQIVVFKR 132
PRK06973 PRK06973
nicotinate-nucleotide adenylyltransferase;
33-182 1.54e-18

nicotinate-nucleotide adenylyltransferase;


Pssm-ID: 180781 [Multi-domain]  Cd Length: 243  Bit Score: 80.98  E-value: 1.54e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931  33 VGLFGGSFNPPHGGHALVAEIAIRRLKLDQLWWMVTpGNPLKdSRELAPLSERLRLSEEVA---EDPRIKVT-ALEAAFH 108
Cdd:PRK06973   24 IGILGGTFDPIHDGHLALARRFADVLDLTELVLIPA-GQPWQ-KADVSAAEHRLAMTRAAAaslVLPGVTVRvATDEIEH 101
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2563495931 109 V--RYTADTLALIRNA-NPDVYFVWVMGADNLASFHRWQRWREIAQNFPIAIIDRPGSTLSYLSSRMAQTFSDSRLD 182
Cdd:PRK06973  102 AgpTYTVDTLARWRERiGPDASLALLIGADQLVRLDTWRDWRRLFDYAHLCAATRPGFDLGAASPAVAAEIAARQAD 178
PRK08887 PRK08887
nicotinate-nicotinamide nucleotide adenylyltransferase;
31-151 3.37e-07

nicotinate-nicotinamide nucleotide adenylyltransferase;


Pssm-ID: 181576 [Multi-domain]  Cd Length: 174  Bit Score: 48.57  E-value: 3.37e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931  31 MTVGLFGGSFNPPHGGHALVaeiaIRRLK-LDQLWwmVTPGNPLKDSRELAPLSERLRLSEEVAED---PRIKVTALEAA 106
Cdd:PRK08887    2 KKIAVFGSAFNPPSLGHKSV----IESLShFDLVL--LVPSIAHAWGKTMLDYETRCQLVDAFIQDlglSNVQRSDIEQE 75
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 2563495931 107 FHVR----YTADTLALIRNANPDVYFVWVMGADNLASFHRWQRWREIAQ 151
Cdd:PRK08887   76 LYAPdesvTTYALLTRLQELYPEADLTFVIGPDNFLKFAKFYKADEITQ 124
cytidylyltransferase_like cd02039
Cytidylyltransferase-like domain; Cytidylyltransferase-like domain. Many of these proteins are ...
33-171 1.30e-06

Cytidylyltransferase-like domain; Cytidylyltransferase-like domain. Many of these proteins are known to use CTP or ATP and release pyrophosphate. Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown.


Pssm-ID: 185678 [Multi-domain]  Cd Length: 143  Bit Score: 46.28  E-value: 1.30e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2563495931  33 VGLFGGSFNPPHGGHALVAEIAIRRLkLDQLWWMVTPGNPLKDS-RELAPLSERLRLSEEvAEDPRIKVTALEA-AFHVR 110
Cdd:cd02039     1 VGIIIGRFEPFHLGHLKLIKEALEEA-LDEVIIIIVSNPPKKKRnKDPFSLHERVEMLKE-ILKDRLKVVPVDFpEVKIL 78
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2563495931 111 YTADTLALIRNANPDVYFvwVMGADNLASFHRWQRWREIAQNFPIAII--DRPGSTLSYLSSR 171
Cdd:cd02039    79 LAVVFILKILLKVGPDKV--VVGEDFAFGKNASYNKDLKELFLDIEIVevPRVRDGKKISSTL 139
cyt_tran_rel TIGR00125
cytidyltransferase-like domain; Protein families that contain at least one copy of this domain ...
33-97 9.92e-04

cytidyltransferase-like domain; Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown. Many of these proteins are known to use CTP or ATP and release pyrophosphate.


Pssm-ID: 272920 [Multi-domain]  Cd Length: 66  Bit Score: 36.52  E-value: 9.92e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2563495931  33 VGLFGGSFNPPHGGHALVAEIAIRrlKLDQLWWMVTP---GNPLKDsRELAPLSERLRLSE-EVAEDPR 97
Cdd:TIGR00125   1 RVIFVGTFDPFHLGHLDLLERAKE--LFDELIVGVGSdqfVNPLKG-EPVFSLEERLEMLKaLKYVDEV 66
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH