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Conserved domains on  [gi|445933129|ref|WP_000010984|]
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MULTISPECIES: YrzA family protein [Bacillus]

Protein Classification

YrzA family protein( domain architecture ID 10566652)

YrzA family protein is a DUF2536 domain-containing protein; similar to Bacillus subtilis protein YrzA

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2536 pfam10750
Protein of unknown function (DUF2536); This family of proteins with unknown function appears ...
 1-68 9.27e-37

Protein of unknown function (DUF2536); This family of proteins with unknown function appears to be restricted to Bacillus spp. Structural modelling suggests this domain may bind nucleic acids.


:

Pssm-ID: 371221  Cd Length: 68  Bit Score: 117.48  E-value: 9.27e-37
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 445933129   1 MSFTFEMLEDKVEFFEAGDLASLERKISEQIDNNKALMLEVHHISHQMVMDPESKRPYYSAVVHFKLK 68
Cdd:pfam10750  1 MNFQLDLIEDKVEFFEASDLKALEKKINEQIENNKALLLEVHSVSHQMHVDPKTGRPLYSAVVHFKAK 68
 
Name Accession Description Interval E-value
DUF2536 pfam10750
Protein of unknown function (DUF2536); This family of proteins with unknown function appears ...
 1-68 9.27e-37

Protein of unknown function (DUF2536); This family of proteins with unknown function appears to be restricted to Bacillus spp. Structural modelling suggests this domain may bind nucleic acids.


Pssm-ID: 371221  Cd Length: 68  Bit Score: 117.48  E-value: 9.27e-37
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 445933129   1 MSFTFEMLEDKVEFFEAGDLASLERKISEQIDNNKALMLEVHHISHQMVMDPESKRPYYSAVVHFKLK 68
Cdd:pfam10750  1 MNFQLDLIEDKVEFFEASDLKALEKKINEQIENNKALLLEVHSVSHQMHVDPKTGRPLYSAVVHFKAK 68
 
Name Accession Description Interval E-value
DUF2536 pfam10750
Protein of unknown function (DUF2536); This family of proteins with unknown function appears ...
 1-68 9.27e-37

Protein of unknown function (DUF2536); This family of proteins with unknown function appears to be restricted to Bacillus spp. Structural modelling suggests this domain may bind nucleic acids.


Pssm-ID: 371221  Cd Length: 68  Bit Score: 117.48  E-value: 9.27e-37
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 445933129   1 MSFTFEMLEDKVEFFEAGDLASLERKISEQIDNNKALMLEVHHISHQMVMDPESKRPYYSAVVHFKLK 68
Cdd:pfam10750  1 MNFQLDLIEDKVEFFEASDLKALEKKINEQIENNKALLLEVHSVSHQMHVDPKTGRPLYSAVVHFKAK 68
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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