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Conserved domains on  [gi|445942664|ref|WP_000020519|]
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MULTISPECIES: molybdate ABC transporter permease subunit [Bacillus]

Protein Classification

molybdate ABC transporter permease subunit( domain architecture ID 10790565)

molybdate ABC transporter permease subunit is the transmembrane subunit found in a periplasmic binding protein (PBP)-dependent ABC transport system involved in the transport of molybdenum

Gene Ontology:  GO:0043190|GO:0140359|GO:0042626|GO:0016020|GO:0015098|GO:0015689
PubMed:  25750732|24638992|18535149|17723295
TCDB:  3.A.1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ModB COG4149
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ...
 4-220 7.24e-94

ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis


:

Pssm-ID: 443320 [Multi-domain]  Cd Length: 223  Bit Score: 273.85  E-value: 7.24e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   4 DAIISPVFLSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWVESLF 83
Cdd:COG4149    3 PEDWSALWLSLKVALIATLLLLLLGIPLAWWLARTRFRGKGLLEALVTLPLVLPPTVLGFYLLLLFGRNGPLGQLLEELF 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  84 QQSIMFTSTAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEF 163
Cdd:COG4149   83 GISLVFTWTGAVLASVVVSLPLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGEF 162

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 445942664 164 GATLMFAGNIPGKTQTIPTAIYMAIDASNMQLAWTLVVITISMSLLFLLCIQLINKR 220
Cdd:COG4149  163 GATLMFAGNIPGKTQTLPLAIYDAVEAGDYAAAHALSLILLAISFVVLLLLNLLNRR 219
 
Name Accession Description Interval E-value
ModB COG4149
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ...
 4-220 7.24e-94

ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis


Pssm-ID: 443320 [Multi-domain]  Cd Length: 223  Bit Score: 273.85  E-value: 7.24e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   4 DAIISPVFLSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWVESLF 83
Cdd:COG4149    3 PEDWSALWLSLKVALIATLLLLLLGIPLAWWLARTRFRGKGLLEALVTLPLVLPPTVLGFYLLLLFGRNGPLGQLLEELF 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  84 QQSIMFTSTAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEF 163
Cdd:COG4149   83 GISLVFTWTGAVLASVVVSLPLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGEF 162

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 445942664 164 GATLMFAGNIPGKTQTIPTAIYMAIDASNMQLAWTLVVITISMSLLFLLCIQLINKR 220
Cdd:COG4149  163 GATLMFAGNIPGKTQTLPLAIYDAVEAGDYAAAHALSLILLAISFVVLLLLNLLNRR 219
modB_ABC TIGR02141
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ...
 11-220 1.92e-87

molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]


Pssm-ID: 273993 [Multi-domain]  Cd Length: 208  Bit Score: 257.17  E-value: 1.92e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   11 FLSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWVEsLFQQSIMFT 90
Cdd:TIGR02141   1 WLSLKVAVIATLLLLPLGIPVAWLLARSRFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFGPNGPIGKLLE-LFGISLVFT 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   91 STAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEFGATLMFA 170
Cdd:TIGR02141  80 FTGAVLASVIVSFPLMVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFA 159

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 445942664  171 GNIPGKTQTIPTAIYMAIDASNMqLAWTLVVITISMSLLFLLCIQLINKR 220
Cdd:TIGR02141 160 GNIPGETQTIPLAIYDAVESDYE-LAHQLSLVLLAISLIVLLLVELLNKR 208
modB PRK09421
molybdate ABC transporter permease subunit;
4-220 2.82e-61

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 191.29  E-value: 2.82e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   4 DAIISPVFLSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWVESLF 83
Cdd:PRK09421   5 DPEWQAVLLSLKVSSVAVLFSLPFGILVAWLLARCRFPGKSLLDSLLHLPLVLPPVVTGYLLLISMGRRGFIGQWLYEWF 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  84 QQSIMFTSTAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEF 163
Cdd:PRK09421  85 GISFAFSWRGAALAAAVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEF 164

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 445942664 164 GATLMFAGNIPGKTQTIPTAIYMAIDASNMQL-AWTLVVITISMSLLFLLCIQLINKR 220
Cdd:PRK09421 165 GATITFVSNIPGETQTIPSAMYTLIQTPGGESaAARLCIISIAIALASLLLSEWLARR 222
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 13-202 3.13e-20

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 84.13  E-value: 3.13e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  13 SLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWveslfqqSIMFTST 92
Cdd:NF038017   1 SLRVSGTATLIAALIGIPLGALLALRRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSRSGPLGFL-------GLLYTPT 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  93 AAIIASTVVAFPLMyqsakTGFSIANVQ-----IEESARDLGASEYQVFLHVTLPLAFpALLSGMILSFVRALGEFGATL 167
Cdd:NF038017  74 AMIIAQAVLALPIV-----AGLTLAAVQgldpeLRLQILSLGATRWQALWTLLKEARF-ALLAAVLAGFGRAISEVGAVM 147

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 445942664 168 MFAGNIPGKTQTIPTAIYMAIDASNMQLAWTLVVI 202
Cdd:NF038017 148 MVGGNIRGYTRVLTTAIVLETSKGNFDLALALGII 182
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 13-208 1.19e-15

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 72.31  E-value: 1.19e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  13 SLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWveslfqqsiMFTST 92
Cdd:cd06261    4 TLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGIL---------PGLGL 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  93 AAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEFGATLMFAGN 172
Cdd:cd06261   75 PALILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGG 154

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 445942664 173 IPGKTQTIPTAIYMAIDASNMQLAWTLVVITISMSL 208
Cdd:cd06261  155 EAPGPGTGLLLIFAILFPGDLGVAAAVALILLLLSL 190
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 28-221 3.34e-09

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 54.23  E-value: 3.34e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   28 GTIVGRALARS-SWRYKVLLETIFLLPMVLPPTVIGFFLIIIFgnnspigrwveslFQQSIMFTSTAAIIASTVVAFPLM 106
Cdd:pfam00528   1 GIPLGIIAALRrGRRLDRLLRPLIDLLQALPSFVLAILLVVIA-------------ILSILGHGILPAIILALLGWAGYA 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  107 YQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEFGATLMFaGNIPGKTQTIPTAIYM 186
Cdd:pfam00528  68 RLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFL-GSWPGLGLLLIEAILG 146

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 445942664  187 AIDASNMQLAWTLVVITISMSLLFLLCIQLINKRI 221
Cdd:pfam00528 147 YDYPEIQGPVLAAALILLLLNLLVDILQRLLDPRV 181
 
Name Accession Description Interval E-value
ModB COG4149
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ...
 4-220 7.24e-94

ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis


Pssm-ID: 443320 [Multi-domain]  Cd Length: 223  Bit Score: 273.85  E-value: 7.24e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   4 DAIISPVFLSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWVESLF 83
Cdd:COG4149    3 PEDWSALWLSLKVALIATLLLLLLGIPLAWWLARTRFRGKGLLEALVTLPLVLPPTVLGFYLLLLFGRNGPLGQLLEELF 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  84 QQSIMFTSTAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEF 163
Cdd:COG4149   83 GISLVFTWTGAVLASVVVSLPLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGEF 162

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 445942664 164 GATLMFAGNIPGKTQTIPTAIYMAIDASNMQLAWTLVVITISMSLLFLLCIQLINKR 220
Cdd:COG4149  163 GATLMFAGNIPGKTQTLPLAIYDAVEAGDYAAAHALSLILLAISFVVLLLLNLLNRR 219
modB_ABC TIGR02141
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ...
 11-220 1.92e-87

molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]


Pssm-ID: 273993 [Multi-domain]  Cd Length: 208  Bit Score: 257.17  E-value: 1.92e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   11 FLSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWVEsLFQQSIMFT 90
Cdd:TIGR02141   1 WLSLKVAVIATLLLLPLGIPVAWLLARSRFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFGPNGPIGKLLE-LFGISLVFT 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   91 STAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEFGATLMFA 170
Cdd:TIGR02141  80 FTGAVLASVIVSFPLMVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFA 159

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 445942664  171 GNIPGKTQTIPTAIYMAIDASNMqLAWTLVVITISMSLLFLLCIQLINKR 220
Cdd:TIGR02141 160 GNIPGETQTIPLAIYDAVESDYE-LAHQLSLVLLAISLIVLLLVELLNKR 208
modB PRK09421
molybdate ABC transporter permease subunit;
4-220 2.82e-61

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 191.29  E-value: 2.82e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   4 DAIISPVFLSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWVESLF 83
Cdd:PRK09421   5 DPEWQAVLLSLKVSSVAVLFSLPFGILVAWLLARCRFPGKSLLDSLLHLPLVLPPVVTGYLLLISMGRRGFIGQWLYEWF 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  84 QQSIMFTSTAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEF 163
Cdd:PRK09421  85 GISFAFSWRGAALAAAVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEF 164

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 445942664 164 GATLMFAGNIPGKTQTIPTAIYMAIDASNMQL-AWTLVVITISMSLLFLLCIQLINKR 220
Cdd:PRK09421 165 GATITFVSNIPGETQTIPSAMYTLIQTPGGESaAARLCIISIAIALASLLLSEWLARR 222
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 12-220 4.72e-52

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 168.78  E-value: 4.72e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  12 LSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWVESLFQQsIMFTS 91
Cdd:COG0555   58 LSLGTALIAALINLVFGLPLAWVLVRYRFPGKRLVDALVDLPFALPTAVAGIALLLLFGPNGWLGQLLAPLGIK-VAFTP 136

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  92 TAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEFGATLMFAG 171
Cdd:COG0555  137 LGIVLAQTFVSLPFVVRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIAG 216

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 445942664 172 NIPGKTQTIPTAIYMAIDASNMQLAWTLVVITISMSLLFLLCIQLINKR 220
Cdd:COG0555  217 NLPMKTEILPLLIYLKLEEGDYAGATAIALVLLLISFLLLLLINLLQRR 265
Mo_ABC_porter TIGR01581
NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively ...
 12-212 1.63e-48

NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively weak homology compared to its neighbor clades, the molybdate (TIGR02141) and sulfate (TIGR00969) porters. Neighbor-Joining, PAM-distance phylogenetic trees support the separation of the clades in this way. Included in this group is a gene designated NifC in Clostridium pasturianum. It would be reasonable to presume that NifC acts as a molybdate porter since the most common form of nitrogenase is a molybdoenzyme. Several other sequences falling within the scope of this model are annotated as molybdate porters and one, from Halobacterium, is annotated as a sulfate porter. There is presently no experimental evidence to support annotations with this degree of specificity.


Pssm-ID: 130643  Cd Length: 225  Bit Score: 158.71  E-value: 1.63e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   12 LSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWVESLFQQsIMFTS 91
Cdd:TIGR01581  25 LSLATSLASLLLAVIIGIPTAYVLARVRFPLKKLLDTLLDLPMVLPPLVAGLALLLLFGRNGLLGPYLEAAGIQ-VIFST 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   92 TAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEFGATLMFAG 171
Cdd:TIGR01581 104 LGVVLAQTFVASPYYVRVARSTFKSVDPRYEDVARSLGAGPLETFRKITLPMARPGLLAGLVLAWARALGEFGATLMFAG 183

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 445942664  172 NIPGKTQTIPTAIYMAIDASNMQLAWTLVVITISMSLLFLL 212
Cdd:TIGR01581 184 SIQGKTRTLPLAIYLNIQSDNIEAAVASALLLLVIAFLLLL 224
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 4-220 8.96e-35

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 124.07  E-value: 8.96e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   4 DAIISPVFLSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGnnspigrwveslf 83
Cdd:COG1177   57 PRLLDALLNSLLIALLSTLLATVLGTPAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFS------------- 123

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  84 QQSIMFTSTAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEF 163
Cdd:COG1177  124 ALGLSGGLWGLILAHVVFTLPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEF 203

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 445942664 164 GATLMFAGnipGKTQTIPTAIYMAIDASNMQLAWTLVVITISMSLLFLLCIQLINKR 220
Cdd:COG1177  204 VITLFLAG---PGVTTLPVYIYSMIRRGISPEINALSTLLILLSLLLLLLAERLRRR 257
3a0106s02 TIGR00969
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ...
 5-220 2.56e-32

sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]


Pssm-ID: 273370  Cd Length: 271  Bit Score: 118.22  E-value: 2.56e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664    5 AIISPVFLSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWVESLFQ 84
Cdd:TIGR00969  57 IAVSAYNLTLLMALIAVPLNGVFGLLIAWVLTRYQFPGRKLLDALIDLPFALSPVVAGLTLALLYGSNGWLGSWLASFGI 136

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   85 QsIMFTSTAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEFG 164
Cdd:TIGR00969 137 Q-IIFTWPGMALAMIFVSLPFVVREVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFG 215

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 445942664  165 ATLMFAGNIPGKTQTIPTAIYMAIDASNMQLAWTLVVITISMSLLFLLCIQLINKR 220
Cdd:TIGR00969 216 AVVVVSGNIPGKTLTLPLLIEERLEQYDYPGAYVIAAVLLLVSLVTLFLINALQAR 271
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
13-220 2.51e-30

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 117.18  E-value: 2.51e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  13 SLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWVESLFQQSI--MFT 90
Cdd:COG1178   59 TLLLALLVTLLSLLLGVPLAWLLARTDFPGRRLLRWLLLLPLALPPYVVALAWIALFGPNGLLNTLLRALFGLEPpdIYG 138

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  91 STAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEFGATLMFA 170
Cdd:COG1178  139 LGGIILVLVLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLVLG 218

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 445942664 171 GNIpgktQTIPTAIYMAI-DASNMQLAWTLVVITISMSLLFLLCIQLINKR 220
Cdd:COG1178  219 GGY----TTLTTAIYQAWlGDFDLGAAAALALVLLLLVLLLLLLERRLRRR 265
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
4-220 9.79e-30

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 115.26  E-value: 9.79e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   4 DAIISPVFLSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIgrwveslf 83
Cdd:COG1178  334 PSLLRALLNSLLLALLAALLAVLLALLLAYLVRRRRGRLARLLDRLAMLPYAVPGIVLGLGLLLLFNRPLPL-------- 405

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  84 qqSIMFTSTAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEF 163
Cdd:COG1178  406 --LLYGTLAILVLAYVVRFLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKEL 483

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 445942664 164 GATLMFAgniPGKTQTIPTAIYMAIDASNMQLAWTLVVITISMSLLFLLCIQLINKR 220
Cdd:COG1178  484 SATLLLR---PPGFETLAVLIYQLASSGRYGEAAALALLLVLVSLLPVLLLERLLGR 537
cysT CHL00187
sulfate transport protein; Provisional
 6-185 1.09e-27

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 105.10  E-value: 1.09e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   6 IISPVFLSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWVESLFQQ 85
Cdd:CHL00187  53 ALSAYSLTLSMALIAALINGFFGLLIAWVLVRYNFPGKRLLDAAVDLPFALPTSVAGLTLATVYGDNGWIGHLLSHLGIQ 132

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  86 sIMFTSTAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEFGA 165
Cdd:CHL00187 133 -IVFTKLGVLLAMIFVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGEYGS 211

                        170       180
                 ....*....|....*....|
gi 445942664 166 TLMFAGNIPGKTQTIPTAIY 185
Cdd:CHL00187 212 IVIISSNIPFKDLVASVLIF 231
PotB COG1176
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ...
 13-220 6.21e-25

ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];


Pssm-ID: 440789 [Multi-domain]  Cd Length: 287  Bit Score: 99.07  E-value: 6.21e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  13 SLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWVESL----FQQSIM 88
Cdd:COG1176   72 TLWIALLTTLICLLLGYPIAYFLARAPPRWRNLLLLLVILPFWTSFLVRTYAWIVLLGRNGLLNSLLLALglidEPLRLL 151

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  89 FTSTAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEFGATLM 168
Cdd:COG1176  152 YTEFAVVIGLVYVYLPFMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPAL 231

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 445942664 169 FAGnipGKTQTIPTAIYM-AIDASNMQLAWTLVVITISMSLLFLLCIQLINKR 220
Cdd:COG1176  232 LGG---GKVLMIGNLIYQqFLSALNWPLAAALAVVLLLIVLLVLLLYLRLLRR 281
TupA COG4662
ABC-type tungstate transport system, periplasmic component [Inorganic ion transport and ...
 10-220 3.59e-24

ABC-type tungstate transport system, periplasmic component [Inorganic ion transport and metabolism];


Pssm-ID: 443699 [Multi-domain]  Cd Length: 232  Bit Score: 95.56  E-value: 3.59e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  10 VFLSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWveslfqqSIMF 89
Cdd:COG4662   26 VLLSLRVSLTATLIAALIGLPLGALLALKRFPGRRLVISLLNTLMGLPPVVVGLLVYLLLSRSGPLGFL-------GLLF 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  90 TSTAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLhVTLPLAFPALLSGMILSFVRALGEFGATLMF 169
Cdd:COG4662   99 TPTAMIIAQTVLALPIVAALTRAAVEDLDRRLRETLRSLGASRLQALL-TLLWEARFGLLAAVLAGFGRAISEVGAVMMV 177

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 445942664 170 AGNIPGKTQTIPTAIYMAIDASNMQLAWTLVVITISMSLLFLLCIQLINKR 220
Cdd:COG4662  178 GGNIKGYTRVMTTAIALETSKGEFALAIALGIVLLAIALLVNALLSLLQGR 228
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
12-221 7.95e-21

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 87.89  E-value: 7.95e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  12 LSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWVeSLFQQSIMFTS 91
Cdd:PRK10971  62 VTLLSAFVASIFNAVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGWYGEWL-AKFDIKVTYTW 140

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  92 TAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEFGATLMFAG 171
Cdd:PRK10971 141 LGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAG 220

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 445942664 172 NIPGKTQTIPTAIYMAIDASNMQLAWTLVVITISMSLLFLLCIQLINKRI 221
Cdd:PRK10971 221 NIAWKTEVTSLMIFVRLQEFDYPAASAIASVILAASLLLLFSINTLQSRF 270
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 13-202 3.13e-20

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 84.13  E-value: 3.13e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  13 SLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWveslfqqSIMFTST 92
Cdd:NF038017   1 SLRVSGTATLIAALIGIPLGALLALRRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSRSGPLGFL-------GLLYTPT 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  93 AAIIASTVVAFPLMyqsakTGFSIANVQ-----IEESARDLGASEYQVFLHVTLPLAFpALLSGMILSFVRALGEFGATL 167
Cdd:NF038017  74 AMIIAQAVLALPIV-----AGLTLAAVQgldpeLRLQILSLGATRWQALWTLLKEARF-ALLAAVLAGFGRAISEVGAVM 147

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 445942664 168 MFAGNIPGKTQTIPTAIYMAIDASNMQLAWTLVVI 202
Cdd:NF038017 148 MVGGNIRGYTRVLTTAIVLETSKGNFDLALALGII 182
cysW PRK11602
sulfate/thiosulfate ABC transporter permease CysW;
10-181 2.26e-16

sulfate/thiosulfate ABC transporter permease CysW;


Pssm-ID: 183225  Cd Length: 283  Bit Score: 75.94  E-value: 2.26e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  10 VFLSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWVESLFQQsIMF 89
Cdd:PRK11602  66 IWLTVLIALIAVPVNLVFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQ-LMF 144

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  90 TSTAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEFGATLMF 169
Cdd:PRK11602 145 SWPGMVLVTIFVTCPFVVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVV 224

                        170
                 ....*....|..
gi 445942664 170 AGNIPGKTQTIP 181
Cdd:PRK11602 225 SGSIRGETLSLP 236
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 13-208 1.19e-15

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 72.31  E-value: 1.19e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  13 SLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWveslfqqsiMFTST 92
Cdd:cd06261    4 TLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGIL---------PGLGL 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  93 AAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEFGATLMFAGN 172
Cdd:cd06261   75 PALILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGG 154

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 445942664 173 IPGKTQTIPTAIYMAIDASNMQLAWTLVVITISMSL 208
Cdd:cd06261  155 EAPGPGTGLLLIFAILFPGDLGVAAAVALILLLLSL 190
potC PRK09500
spermidine/putrescine ABC transporter membrane protein; Reviewed
 1-156 2.77e-11

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 236542 [Multi-domain]  Cd Length: 256  Bit Score: 61.15  E-value: 2.77e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   1 MSIDAIISPVFLSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIF-GNNSPIGRWv 79
Cdd:PRK09500  50 FNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLFmLLGIQLGFW- 128

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 445942664  80 eSLFqqsimftstaaiIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSF 156
Cdd:PRK09500 129 -SLL------------FAHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLALPAVAAGWLLSF 192
UgpA COG1175
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
21-211 3.14e-11

ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440788 [Multi-domain]  Cd Length: 298  Bit Score: 61.30  E-value: 3.14e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  21 TILVTILGTIVGRALA---RSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIF-GNNSPIGRWVESLFQQSIMFTST---- 92
Cdd:COG1175   85 TVVSVPLQLVLGLLLAlllNRKLRGRGFFRTLFFLPWVISPVVVALIWKWLFnPDYGLLNALLGALGLEPINWLGDpsla 164

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  93 --AAIIASTVVAFP---LMYQSAktgfsIANV--QIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEFG- 164
Cdd:COG1175  165 lpAVIIVTVWKGTGfnmLIFLAG-----LQSIprELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGALQVFDl 239

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 445942664 165 ATLMFAGNIPGKTQTIPTAIY-MAIDASNMQLA----WTLVVITISMSLLFL 211
Cdd:COG1175  240 VYVLTGGGPGNSTTTLVLYIYqTAFQQFDFGYAsaiaVVLFLIILVLTLLQL 291
UgpE COG0395
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ...
 13-206 1.99e-10

ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440164 [Multi-domain]  Cd Length: 282  Bit Score: 58.95  E-value: 1.99e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  13 SLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTV--IGFFLIIIFGNnspigrWVESLFqqsimft 90
Cdd:COG0395   79 SLIVAVVSTVLSLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVllIPLYLLFRQLG------LLNTYW------- 145

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  91 stAAIIASTVVAFP----LMYQSAKTgfsiANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEFGAT 166
Cdd:COG0395  146 --GLILPYLAFGLPfgifLLRQFFRS----IPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTFIGAWNDFLWP 219

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 445942664 167 LMFAGNipGKTQTIPTAIYMAIDASNMQLAWTLVVITISM 206
Cdd:COG0395  220 LILLTS--PDLRTLPVGLASFQGQYGTDWGLLMAAAVIAT 257
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 13-172 3.55e-10

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 58.92  E-value: 3.55e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   13 SLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSpigrWVESLFQQSIMFTST 92
Cdd:TIGR03262  59 SLTVSAIVTAIVVPLAFAFAYALTRSRIPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQG----LLKGLLGGFSIYGFW 134

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   93 AAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEFGATLMFAGN 172
Cdd:TIGR03262 135 GIVIGEVFYTFPHALMILVTALSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVIGGD 214
PRK10592 PRK10592
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
 4-188 3.17e-09

putrescine transporter subunit: membrane component of ABC superfamily; Provisional


Pssm-ID: 182574  Cd Length: 281  Bit Score: 55.63  E-value: 3.17e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   4 DAIISPVFLSLRVAACATILVTILGTIVGRALARSSwRYKVLLETIFLL--PMVLPPTVIGFFLIIIFGNNSPIGRWVes 81
Cdd:PRK10592  59 DAMMSAVGLSLTIAACAATAAAILGTIAAVVMVRFG-RFRGSNGFAFMItaPLVMPDVITGLSLLLLFVALAHAIGWP-- 135

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  82 lfQQSIMFTstaaiIASTVVAFPLMYQSAKTGFSIANV--QIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRA 159
Cdd:PRK10592 136 --ADRGMLT-----IWLAHVTFCTAYVAVVISSRLRELdrSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLS 208

                        170       180
                 ....*....|....*....|....*....
gi 445942664 160 LGEFGATLMFAGniPGKTqTIPTAIYMAI 188
Cdd:PRK10592 209 LDDLVIASFVSG--PGAT-TLPMLVFSSV 234
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 28-221 3.34e-09

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 54.23  E-value: 3.34e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   28 GTIVGRALARS-SWRYKVLLETIFLLPMVLPPTVIGFFLIIIFgnnspigrwveslFQQSIMFTSTAAIIASTVVAFPLM 106
Cdd:pfam00528   1 GIPLGIIAALRrGRRLDRLLRPLIDLLQALPSFVLAILLVVIA-------------ILSILGHGILPAIILALLGWAGYA 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  107 YQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEFGATLMFaGNIPGKTQTIPTAIYM 186
Cdd:pfam00528  68 RLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFL-GSWPGLGLLLIEAILG 146

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 445942664  187 AIDASNMQLAWTLVVITISMSLLFLLCIQLINKRI 221
Cdd:pfam00528 147 YDYPEIQGPVLAAALILLLLNLLVDILQRLLDPRV 181
PRK15050 PRK15050
2-aminoethylphosphonate transport system permease PhnU; Provisional
 13-222 1.70e-08

2-aminoethylphosphonate transport system permease PhnU; Provisional


Pssm-ID: 237888 [Multi-domain]  Cd Length: 296  Bit Score: 53.47  E-value: 1.70e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  13 SLRVAACATILVTILGTIV-----------GRALARsswrykvLLETIFLLPMVLpptvIGFFLIIIFGNNSPIGRWVES 81
Cdd:PRK15050  78 TLQIAFASTAGCLVLGVLLalvlafvpfpgASLVGR-------FIDTFVAFPSFL----ITLAFTFLYGSAGSVNIALQR 146

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  82 LFQQ-----SIMFTSTAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSF 156
Cdd:PRK15050 147 LFGLeapplDFLYSPGGVILAEITFYTPFVVRPLLAAFAQLDARQLEAAASLGASPWRVARRVILPEAWPALAAGGSLCL 226

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 445942664 157 VRALGEFGaTLMFAGNipGKTQTIPTAIY-MAIDASNMQLAWTLVVITISMSLLFLLCIQLINKRIT 222
Cdd:PRK15050 227 LLTLNEFG-IVLFTGA--KDVVTLPVLIYsKAIVDFDYPTACAIAVVNLALSLGLYALYRRVNRRAG 290
TauC COG0600
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ...
 10-222 9.04e-08

ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440365 [Multi-domain]  Cd Length: 254  Bit Score: 51.30  E-value: 9.04e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  10 VFLSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLpMVLPPTVIGFFLIIIFGnnspigrwveslfqqsimF 89
Cdd:COG0600   63 LLASLLRVLLGFALAALLGVPLGLLLGLSRLLRRLLDPLLVFL-RPIPPLALAPLLILWFG------------------I 123

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  90 TSTAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALgefgaTLMF 169
Cdd:COG0600  124 GEASKIFVIFLGAFFPILLNTAAGVRSVDPELLELARSLGASRWQILRKVVLPAALPYIFTGLRIALGLAW-----IGLV 198

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 445942664 170 AGNIPGKTQTIPTAIYMAIDASNMQLAWTLVVITISMSLLFLLCIQLINKRIT 222
Cdd:COG0600  199 VAELLGASSGLGYLILDARQLLDTDLVFAAILVIGLLGLLLDLLLRLLERRLL 251
potB PRK09497
spermidine/putrescine ABC transporter membrane protein; Reviewed
 13-173 1.51e-07

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 181910  Cd Length: 285  Bit Score: 50.84  E-value: 1.51e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  13 SLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPIGRWVESLFQQS----IM 88
Cdd:PRK09497  68 SLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDtpirIM 147

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  89 FTSTAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEF----- 163
Cdd:PRK09497 148 FTESAVIIGLVYILLPFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLPAMGMFyvsdl 227

                        170
                 ....*....|..
gi 445942664 164 --GATLMFAGNI 173
Cdd:PRK09497 228 lgGAKNLLIGNV 239
MalG COG3833
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ...
 13-163 2.32e-06

ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];


Pssm-ID: 443045 [Multi-domain]  Cd Length: 282  Bit Score: 47.07  E-value: 2.32e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  13 SLRVAACATILVTILGTIVGRALARSSWR-YKVLLETIFLLPMVlpPTVIG----FFLIIIFGN-NSPIGRwveslfqqs 86
Cdd:COG3833   78 SLIVAVVTAIISVFLAALAAYAFSRFRFKgRKAGLLALLLLQMF--PAFLAlvalYLLLSALGLlNTLLGL--------- 146

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 445942664  87 IMFTSTAAIIASTVVAfplmyqsaKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEF 163
Cdd:COG3833  147 ILVYLGGAIPFNTWLM--------KGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDF 215
PstC COG0573
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 122-220 1.09e-05

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440338 [Multi-domain]  Cd Length: 303  Bit Score: 45.08  E-value: 1.09e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664 122 EESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEFGATLMFAGNIP-------GKTQTIPTAIYMAIDASNMQ 194
Cdd:COG0573  187 REAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGETMAVLMVAGNAPqipfslfDPGRTLTALIALEFGEAPFG 266

                         90       100       110
                 ....*....|....*....|....*....|.
gi 445942664 195 LAWTLVVITIS-----MSLLFLLCIQLINKR 220
Cdd:COG0573  267 SLHYSALFALGlvlfvITLLVNLLARLIVRR 297
phosphate_pstC TIGR02138
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ...
 56-211 2.36e-05

phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273992 [Multi-domain]  Cd Length: 295  Bit Score: 44.18  E-value: 2.36e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   56 LPPTVIGFFLIIIFGN--NSPIGRWVESLFQqSIMFTSTAAIIASTVVA---FPLMYQSAKTGFSIANVQIEESARDLGA 130
Cdd:TIGR02138 112 IPSVVYGFWGLFVLVPflKPHFQPFLGSNLG-LIPLFGGPILTAGIVLAimiLPTIASISRDALRAVPRSYKEASYALGA 190

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  131 SEYQVFLHVTLPLAFPALLSGMILSFVRALGEFGATLMFAGN--------IPGKTQTIPTAIYMAIDASNMQLAWTLVVI 202
Cdd:TIGR02138 191 TKWETIRRVILPAARSGIVGAVVLGLGRALGETMAVTMVIGNvfpisplsLFDPGTTITSLIANQFGEASGGSVHTSALF 270


                  ....*....
gi 445942664  203 TISMSLLFL 211
Cdd:TIGR02138 271 ALGLVLFVI 279
PRK10683 PRK10683
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
 13-163 1.97e-04

putrescine transporter subunit: membrane component of ABC superfamily; Provisional


Pssm-ID: 182646  Cd Length: 317  Bit Score: 41.62  E-value: 1.97e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  13 SLRVAACATILVTILGTIVGRALARSswryKVLLETIFLLPMVLPPTVIgfFLIIIFG------NNSPIGR---WVESLF 83
Cdd:PRK10683 102 SLQVAAISTLCCLLIGYPLAWAVAHS----KPSTRNILLLLVILPSWTS--FLIRVYAwmgilkNNGVLNNfllWLGVID 175

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  84 QQ-SIMFTSTAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGE 162
Cdd:PRK10683 176 QPlTILHTNLAVYIGIVYAYLPFMVLPIYTALTRIDYSLVEAALDLGARPLKTFFSVIVPLTKGGIIAGSMLVFIPAVGE 255


                 .
gi 445942664 163 F 163
Cdd:PRK10683 256 F 256
malG PRK10998
maltose ABC transporter permease MalG;
13-163 2.13e-04

maltose ABC transporter permease MalG;


Pssm-ID: 182891  Cd Length: 296  Bit Score: 41.23  E-value: 2.13e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  13 SLRVAACATILVTILGTIVGRALARSSWRYK-VLLETIFLLPMVlpPTVIGffLIIIFGNNSPIGRWVESLfqqsiMFTS 91
Cdd:PRK10998  88 SVKVAGITAIGIVALSTTCAYAFARMRFKGKaTLLKGMLIFQMF--PAVLS--LVALYALFDRLGQYIPFI-----GLNT 158

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 445942664  92 TAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEF 163
Cdd:PRK10998 159 HGGVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEV 230
YnjC COG4135
ABC-type uncharacterized transport system YnjBCD, permease component [General function ...
 4-174 1.70e-03

ABC-type uncharacterized transport system YnjBCD, permease component [General function prediction only];


Pssm-ID: 443310 [Multi-domain]  Cd Length: 564  Bit Score: 39.08  E-value: 1.70e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   4 DAIISPVFLSLRVAACATILVTILGTIVGRALARSSWRYKVLLETIFLLPMVLPPtvigffLIIIFGnnspigrWVESLF 83
Cdd:COG4135  352 PGLLEPLGNTLLLALASALIALVLVLACLEAEARRGRRPGRRALWLLYLPLLVPQ------IAFLFG-------LQVLLL 418

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664  84 QQSIMFTSTAAIIASTVVAFPLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALGEF 163
Cdd:COG4135  419 RLGLDGTWLAVIWAHLVFVLPYVFLSLAGPWRALDPRYAQVAASLGASPWRVFWRVKLPLLLRPILTAAAVGFAVSVAQY 498

                        170
                 ....*....|..
gi 445942664 164 GATLMF-AGNIP 174
Cdd:COG4135  499 LPTLLIgAGRVA 510
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 4-220 7.95e-03

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 36.97  E-value: 7.95e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664    4 DAIISPVFLSLRVAACATILVTILGTIVGRALARSSWRykVLLETIFLLPMVLPPTVIGFFLIIIFGN-NSPIGrwvesl 82
Cdd:TIGR03262 332 EAYKNSLRLAATTALIGTILVFGGAYLIEKTRGFGLLR--GVLRFLAILPMAVPGLVLGLGYIFFFNApTNPLN------ 403

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445942664   83 fqqsIMFTSTAAIIASTVVAF-PLMYQSAKTGFSIANVQIEESARDLGASEYQVFLHVTLPLAFPALLSGMILSFVRALG 161
Cdd:TIGR03262 404 ----GLYGTMALLVLCTVVHFyTVSHLTAVTALKQIDSEFEAVSASLKVPFYKTFLRVTLPVCLPAILDIARYLFVNSMT 479

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 445942664  162 EFGATLMFAGNipgKTQTIPTAIYMAIDASNM----QLAWTLVVITISMSLLFLLCIQLINKR 220
Cdd:TIGR03262 480 TVSAVVFLYSP---DTKLASVAILNMDDAGDIapaaAMATLIVLTSAVAKLLFALASRRLLRR 539
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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