|
Name |
Accession |
Description |
Interval |
E-value |
| Ndh |
COG1252 |
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; |
3-350 |
8.80e-74 |
|
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
Pssm-ID: 440864 [Multi-domain] Cd Length: 386 Bit Score: 235.03 E-value: 8.80e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 3 KRIIIAGSGFAGLWAALAAQRAIHlasqeQNIEVMMISPSPNVGIRPRLYEAVLENMNPD-----ISELLTVVDVKFLAG 77
Cdd:COG1252 2 KRIVIVGGGFAGLEAARRLRKKLG-----GDAEVTLIDPNPYHLFQPLLPEVAAGTLSPDdiaipLRELLRRAGVRFIQG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 78 WVDKINADQQTieVSTTDGskQTLSYDRFILATGSTTFMPPIPGLTEYGFSVSTLEDAEKLDQHLKNLANKPANAARNTV 157
Cdd:COG1252 77 EVTGIDPEART--VTLADG--RTLSYDYLVIATGSVTNFFGIPGLAEHALPLKTLEDALALRERLLAAFERAERRRLLTI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 158 VVAGGGLTGLETVTEMPERLRNILGET-----DARVVLVDSSIDIGAAMGDQAATVIREALNELGVEGKAGLRVTALDAT 232
Cdd:COG1252 153 VVVGGGPTGVELAGELAELLRKLLRYPgidpdKVRITLVEAGPRILPGLGEKLSEAAEKELEKRGVEVHTGTRVTEVDAD 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 233 GVTLSNGEKIETETVIWTAGMRANPLTSQIAGEKDNLGRLMGDAYLHVPEAKNIFVTGDTVKVPtDDLGNFNVMSCQHAM 312
Cdd:COG1252 233 GVTLEDGEEIPADTVIWAAGVKAPPLLADLGLPTDRRGRVLVDPTLQVPGHPNVFAIGDCAAVP-DPDGKPVPKTAQAAV 311
|
330 340 350
....*....|....*....|....*....|....*....
gi 445966278 313 SLGRVAGYNAAAELVDLPLHPYSqPKYVTC-VDLGPWGA 350
Cdd:COG1252 312 QQAKVLAKNIAALLRGKPLKPFR-YRDKGClASLGRGAA 349
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
3-291 |
1.51e-36 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 135.14 E-value: 1.51e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 3 KRIIIAGSGFAGLWAALAAQRAihlasqeqNIEVMMISPSPN-VGIRPRLYEAVL----------------ENMNPDISE 65
Cdd:pfam07992 1 YDVVVIGGGPAGLAAALTLAQL--------GGKVTLIEDEGTcPYGGCVLSKALLgaaeapeiaslwadlyKRKEEVVKK 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 66 LltVVDVKFLAGW-VDKINADQQTIEVS-TTDGSKQTLSYDRFILATGSTTFMPPIPGLTE-YGFSVSTLEDAEKLdqhl 142
Cdd:pfam07992 73 L--NNGIEVLLGTeVVSIDPGAKKVVLEeLVDGDGETITYDRLVIATGARPRLPPIPGVELnVGFLVRTLDSAEAL---- 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 143 kNLANKPANaarntVVVAGGGLTGLETVTEmperLRNiLGetdARVVLVDSSIDIGAAMGDQAATVIREALNELGVEGKA 222
Cdd:pfam07992 147 -RLKLLPKR-----VVVVGGGYIGVELAAA----LAK-LG---KEVTLIEALDRLLRAFDEEISAALEKALEKNGVEVRL 212
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 445966278 223 GLRVTALDATG----VTLSNGEKIETETVIWTAGMRANPLTSQIAG-EKDNLGRLMGDAYLHVpEAKNIFVTGD 291
Cdd:pfam07992 213 GTSVKEIIGDGdgveVILKDGTEIDADLVVVAIGRRPNTELLEAAGlELDERGGIVVDEYLRT-SVPGIYAAGD 285
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
2-323 |
1.11e-29 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 118.32 E-value: 1.11e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 2 SKRIIIAGSGFAGLWAA-----LAAQRAIHLASQEqnievmmisPSPNVGiRPRLYEAVLENMNPdisELLTVVD----- 71
Cdd:COG1251 1 KMRIVIIGAGMAGVRAAeelrkLDPDGEITVIGAE---------PHPPYN-RPPLSKVLAGETDE---EDLLLRPadfye 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 72 ---VKFLAG-WVDKINADQQTieVSTTDGSkqTLSYDRFILATGSTTFMPPIPGLTEYG-FSVSTLEDAEKLDQHLknla 146
Cdd:COG1251 68 engIDLRLGtRVTAIDRAART--VTLADGE--TLPYDKLVLATGSRPRVPPIPGADLPGvFTLRTLDDADALRAAL---- 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 147 nkpANAARntVVVAGGGLTGLETVtemperlrNILGETDARVVLVDSSiD--IGAAMGDQAATVIREALNELGVEGKAGL 224
Cdd:COG1251 140 ---APGKR--VVVIGGGLIGLEAA--------AALRKRGLEVTVVERA-PrlLPRQLDEEAGALLQRLLEALGVEVRLGT 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 225 RVTALD----ATGVTLSNGEKIETETVIWTAGMRANpltsqiagekDNLGRLMG---------DAYLHVpEAKNIFVTGD 291
Cdd:COG1251 206 GVTEIEgddrVTGVRLADGEELPADLVVVAIGVRPN----------TELARAAGlavdrgivvDDYLRT-SDPDIYAAGD 274
|
330 340 350
....*....|....*....|....*....|..
gi 445966278 292 TVKVPTDDLGNFNVMSCQHAMSLGRVAGYNAA 323
Cdd:COG1251 275 CAEHPGPVYGRRVLELVAPAYEQARVAAANLA 306
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
33-323 |
9.41e-28 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 111.44 E-value: 9.41e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 33 NIEVMMISPSPNVG-IRPRLYEAVLENMnPDISELLTV---------VDVKFLAgWVDKINADQQTIEVSTtdgsKQTLS 102
Cdd:COG0446 5 DAEITVIEKGPHHSyQPCGLPYYVGGGI-KDPEDLLVRtpesferkgIDVRTGT-EVTAIDPEAKTVTLRD----GETLS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 103 YDRFILATGSTTFMPPIPGLTEYG-FSVSTLEDAEKLDQHLKNLANKpanaarnTVVVAGGGLTGLETVtempERLRnil 181
Cdd:COG0446 79 YDKLVLATGARPRPPPIPGLDLPGvFTLRTLDDADALREALKEFKGK-------RAVVIGGGPIGLELA----EALR--- 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 182 gETDARVVLVDSSIDIGAAMGDQAATVIREALNELGVEGKAGLRVTALDATG---VTLSNGEKIETETVIWTAGMRANPL 258
Cdd:COG0446 145 -KRGLKVTLVERAPRLLGVLDPEMAALLEEELREHGVELRLGETVVAIDGDDkvaVTLTDGEEIPADLVVVAPGVRPNTE 223
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 445966278 259 TSQIAG-EKDNLGRLMGDAYLHVpEAKNIFVTGDTVKVPTDDLG-NFNVMSCQHAMSLGRVAGYNAA 323
Cdd:COG0446 224 LAKDAGlALGERGWIKVDETLQT-SDPDVYAAGDCAEVPHPVTGkTVYIPLASAANKQGRVAAENIL 289
|
|
| PTZ00318 |
PTZ00318 |
NADH dehydrogenase-like protein; Provisional |
4-316 |
2.63e-22 |
|
NADH dehydrogenase-like protein; Provisional
Pssm-ID: 185553 [Multi-domain] Cd Length: 424 Bit Score: 97.92 E-value: 2.63e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 4 RIIIAGSGFAGLWAALaaqraiHLASQEQNIEVmmISPSPNVGIRPRL---------YEAVLENMNPDISELltvvDVKF 74
Cdd:PTZ00318 12 NVVVLGTGWAGAYFVR------NLDPKKYNITV--ISPRNHMLFTPLLpqtttgtleFRSICEPVRPALAKL----PNRY 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 75 LAGWVDKINADQQTIEVSTTDGSKQ------TLSYDRFILATGSTTFMPPIPGLTEYGFSVSTLEDAEKLDQHL------ 142
Cdd:PTZ00318 80 LRAVVYDVDFEEKRVKCGVVSKSNNanvntfSVPYDKLVVAHGARPNTFNIPGVEERAFFLKEVNHARGIRKRIvqcier 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 143 KNLANKPANAARN--TVVVAGGGLTGLETVTEMPERLRNILGETDARVVLVDSSIDIGA-----AMGDQAA---TVIRea 212
Cdd:PTZ00318 160 ASLPTTSVEERKRllHFVVVGGGPTGVEFAAELADFFRDDVRNLNPELVEECKVTVLEAgsevlGSFDQALrkyGQRR-- 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 213 LNELGVEGKAGLRVTALDATGVTLSNGEKIETETVIWTAGMRANPLTSQIAGEKDNLGRLMGDAYLHVPEAKNIFVTGDT 292
Cdd:PTZ00318 238 LRRLGVDIRTKTAVKEVLDKEVVLKDGEVIPTGLVVWSTGVGPGPLTKQLKVDKTSRGRISVDDHLRVKPIPNVFALGDC 317
|
330 340
....*....|....*....|....
gi 445966278 293 VKVPTDDLGNFNVMSCQHAMSLGR 316
Cdd:PTZ00318 318 AANEERPLPTLAQVASQQGVYLAK 341
|
|
| PRK04965 |
PRK04965 |
NADH:flavorubredoxin reductase NorW; |
1-291 |
1.31e-19 |
|
NADH:flavorubredoxin reductase NorW;
Pssm-ID: 179902 [Multi-domain] Cd Length: 377 Bit Score: 89.59 E-value: 1.31e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 1 MSKRIIIAGSGFAglwaalAAQRAIHLASQEQNIEVMMISPSP----NvgiRPRLYEAVLENMNPD------ISELLTVV 70
Cdd:PRK04965 1 MSNGIVIIGSGFA------ARQLVKNIRKQDAHIPITLITADSgdeyN---KPDLSHVFSQGQRADdltrqsAGEFAEQF 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 71 DVKFLA-GWVDKINADQQTIEVSTtdgskQTLSYDRFILATGSTTFMPPIPGLTeygfSVSTLEDAEKLDQHLKNLankp 149
Cdd:PRK04965 72 NLRLFPhTWVTDIDAEAQVVKSQG-----NQWQYDKLVLATGASAFVPPIPGRE----LMLTLNSQQEYRAAETQL---- 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 150 ANAARntVVVAGGGLTGLETVTEMperlrnilGETDARVVLVDSSIDIGAA-MGDQAATVIREALNELGVEGKAGLRVTA 228
Cdd:PRK04965 139 RDAQR--VLVVGGGLIGTELAMDL--------CRAGKAVTLVDNAASLLASlMPPEVSSRLQHRLTEMGVHLLLKSQLQG 208
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 445966278 229 LDATG----VTLSNGEKIETETVIWTAGMRANPLTSQIAGEKDNLGRLMgDAYLHVPeAKNIFVTGD 291
Cdd:PRK04965 209 LEKTDsgirATLDSGRSIEVDAVIAAAGLRPNTALARRAGLAVNRGIVV-DSYLQTS-APDIYALGD 273
|
|
| PRK09564 |
PRK09564 |
coenzyme A disulfide reductase; Reviewed |
79-323 |
1.38e-13 |
|
coenzyme A disulfide reductase; Reviewed
Pssm-ID: 181958 [Multi-domain] Cd Length: 444 Bit Score: 72.00 E-value: 1.38e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 79 VDKINADQQTIEVSTTD-GSKQTLSYDRFILATGSTTFMPPIPGLTEYGFS-VSTLEDAEKLDQHLKNLANKpanaarnT 156
Cdd:PRK09564 79 VVKVDAKNKTITVKNLKtGSIFNDTYDKLMIATGARPIIPPIKNINLENVYtLKSMEDGLALKELLKDEEIK-------N 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 157 VVVAGGGLTGLETVTEMPERLRNI-LGETDARVvlvdssidIGAAMGDQAATVIREALNELGVEGKAGLRVTALDA---- 231
Cdd:PRK09564 152 IVIIGAGFIGLEAVEAAKHLGKNVrIIQLEDRI--------LPDSFDKEITDVMEEELRENGVELHLNEFVKSLIGedkv 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 232 TGVTLSNGEkIETETVIWTAGMRANplTSQIAG---EKDNLGRLMGDAYLHVpEAKNIFVTGDTVKVPTDDLG-NFNVMS 307
Cdd:PRK09564 224 EGVVTDKGE-YEADVVIVATGVKPN--TEFLEDtglKTLKNGAIIVDEYGET-SIENIYAAGDCATIYNIVSNkNVYVPL 299
|
250
....*....|....*.
gi 445966278 308 CQHAMSLGRVAGYNAA 323
Cdd:PRK09564 300 ATTANKLGRMVGENLA 315
|
|
| nitri_red_nirB |
TIGR02374 |
nitrite reductase [NAD(P)H], large subunit; [Central intermediary metabolism, Nitrogen ... |
5-275 |
2.65e-13 |
|
nitrite reductase [NAD(P)H], large subunit; [Central intermediary metabolism, Nitrogen metabolism]
Pssm-ID: 162827 [Multi-domain] Cd Length: 785 Bit Score: 71.78 E-value: 2.65e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 5 IIIAGSGFAGLwaalaaqRAIH--LASQEQNIEVMMISPSPNVGIRPRLYEAVLENmNPDIsELLTVVD--------VKF 74
Cdd:TIGR02374 1 LVLVGNGMAGH-------RCIEevLKLNRHMFEITIFGEEPHPNYNRILLSSVLQG-EADL-DDITLNSkdwyekhgITL 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 75 LAG-WVDKINADQQTIEVSttdgSKQTLSYDRFILATGSTTFMPPIPGLTEYG-FSVSTLEDAekldQHLKNLANKPANA 152
Cdd:TIGR02374 72 YTGeTVIQIDTDQKQVITD----AGRTLSYDKLILATGSYPFILPIPGADKKGvYVFRTIEDL----DAIMAMAQRFKKA 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 153 ArntvvVAGGGLTGLETVTEmperLRNILGETDarvvLVDSSIDIGAAMGDQ-AATVIREALNELGVE---GKAGLRVTA 228
Cdd:TIGR02374 144 A-----VIGGGLLGLEAAVG----LQNLGMDVS----VIHHAPGLMAKQLDQtAGRLLQRELEQKGLTfllEKDTVEIVG 210
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 445966278 229 LD-ATGVTLSNGEKIETETVIWTAGMRANPLTSQIAGEKDNLGRLMGD 275
Cdd:TIGR02374 211 ATkADRIRFKDGSSLEADLIVMAAGIRPNDELAVSAGIKVNRGIIVND 258
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
53-256 |
5.90e-13 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 70.12 E-value: 5.90e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 53 EAVLENMNPDISELLTVVDVKFLAGWVdKInADQQTIEVSTTdgskQTLSYDRFILATGSTTFMPPIPGLTEYGFSVSTl 132
Cdd:COG1249 87 DKVVDRLRGGVEELLKKNGVDVIRGRA-RF-VDPHTVEVTGG----ETLTADHIVIATGSRPRVPPIPGLDEVRVLTSD- 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 133 eDAEKLDQHLKNLankpanaarntvVVAGGGLTGLE--TVtemperLRNiLGetdARVVLVDSSIDIGAAMGDQAATVIR 210
Cdd:COG1249 160 -EALELEELPKSL------------VVIGGGYIGLEfaQI------FAR-LG---SEVTLVERGDRLLPGEDPEISEALE 216
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 445966278 211 EALNELGVEGKAGLRVTALDATG----VTLSNGEKIET---ETVIWTAGMRAN 256
Cdd:COG1249 217 KALEKEGIDILTGAKVTSVEKTGdgvtVTLEDGGGEEAveaDKVLVATGRRPN 269
|
|
| PRK05249 |
PRK05249 |
Si-specific NAD(P)(+) transhydrogenase; |
85-337 |
1.34e-09 |
|
Si-specific NAD(P)(+) transhydrogenase;
Pssm-ID: 235373 [Multi-domain] Cd Length: 461 Bit Score: 59.40 E-value: 1.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 85 DQQTIEVSTTDGSKQTLSYDRFILATGSTTFMPPipgltEYGFSVSTLEDAeklDQHLkNLANKPAnaarnTVVVAGGGL 164
Cdd:PRK05249 120 DPHTVEVECPDGEVETLTADKIVIATGSRPYRPP-----DVDFDHPRIYDS---DSIL-SLDHLPR-----SLIIYGAGV 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 165 TGLETVTemperlrnILGETDARVVLVD------SSID--IGAAMGDQaatvireaLNELGVEGKAGLRVTALDATG--- 233
Cdd:PRK05249 186 IGCEYAS--------IFAALGVKVTLINtrdrllSFLDdeISDALSYH--------LRDSGVTIRHNEEVEKVEGGDdgv 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 234 -VTLSNGEKIETETVIWTAGMRAN--PLTSQIAG-EKDNLGRLMGDAYLH--VPeakNIFVTGDTVKVP----Tddlgnf 303
Cdd:PRK05249 250 iVHLKSGKKIKADCLLYANGRTGNtdGLNLENAGlEADSRGQLKVNENYQtaVP---HIYAVGDVIGFPslasA------ 320
|
250 260 270
....*....|....*....|....*....|....*....
gi 445966278 304 nvmscqhAMSLGRVAGYNA----AAELV-DLPLHPYSQP 337
Cdd:PRK05249 321 -------SMDQGRIAAQHAvgeaTAHLIeDIPTGIYTIP 352
|
|
| PRK09754 |
PRK09754 |
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional |
2-363 |
1.06e-08 |
|
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Pssm-ID: 170080 [Multi-domain] Cd Length: 396 Bit Score: 56.47 E-value: 1.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 2 SKRIIIAGSGFAGLWAALAAQRA-----IHLASQEQNIEVMmispspnvgiRPRLYEAVLENMNPDISELLTV------- 69
Cdd:PRK09754 3 EKTIIIVGGGQAAAMAAASLRQQgftgeLHLFSDERHLPYE----------RPPLSKSMLLEDSPQLQQVLPAnwwqenn 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 70 VDVKfLAGWVDKINADQQtiEVSTTDGSKqtLSYDRFILATGSTTF-MPPIPGLTEYGFSVSTLEDAEKLDQHLKNlank 148
Cdd:PRK09754 73 VHLH-SGVTIKTLGRDTR--ELVLTNGES--WHWDQLFIATGAAARpLPLLDALGERCFTLRHAGDAARLREVLQP---- 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 149 panaaRNTVVVAGGGLTGLETVTEMPERlrnilgetDARVVLVDSSIDIgaaMGDQAATVIREALneLGVEGKAGLR--- 225
Cdd:PRK09754 144 -----ERSVVIVGAGTIGLELAASATQR--------RCKVTVIELAATV---MGRNAPPPVQRYL--LQRHQQAGVRill 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 226 ----VTALDATGV--TLSNGEKIETETVIWTAGMRANpltSQIAGEK--DNLGRLMGDAYLHVPEAkNIFVTGDTV--KV 295
Cdd:PRK09754 206 nnaiEHVVDGEKVelTLQSGETLQADVVIYGIGISAN---DQLAREAnlDTANGIVIDEACRTCDP-AIFAGGDVAitRL 281
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 445966278 296 PTDDLgnfnvMSCQHAMSLGRVAGYNAAAEL-VDLPLHPysqpkyvtcvdlGPWgaLYTEGWDRQVQFV 363
Cdd:PRK09754 282 DNGAL-----HRCESWENANNQAQIAAAAMLgLPLPLLP------------PPW--FWSDQYSDNLQFI 331
|
|
| PRK13748 |
PRK13748 |
putative mercuric reductase; Provisional |
52-142 |
7.48e-08 |
|
putative mercuric reductase; Provisional
Pssm-ID: 184298 [Multi-domain] Cd Length: 561 Bit Score: 54.39 E-value: 7.48e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 52 YEAVLENmNPDISelltvvdvkFLAGWVDkiNADQQTIEVSTTDGSKQTLSYDRFILATGSTTFMPPIPGL--TEYGFSV 129
Cdd:PRK13748 194 YEGILDG-NPAIT---------VLHGEAR--FKDDQTLIVRLNDGGERVVAFDRCLIATGASPAVPPIPGLkeTPYWTST 261
|
90
....*....|...
gi 445966278 130 STLEdAEKLDQHL 142
Cdd:PRK13748 262 EALV-SDTIPERL 273
|
|
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
5-168 |
1.43e-07 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 52.43 E-value: 1.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 5 IIIAGSGFAGLWAALAAQRAihlasqeqNIEVMMISpSPNVGIRPRLYEAVlEN--------MNPDISELLTV----VDV 72
Cdd:COG0492 3 VVIIGAGPAGLTAAIYAARA--------GLKTLVIE-GGEPGGQLATTKEI-ENypgfpegiSGPELAERLREqaerFGA 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 73 KFLAGWVDKINADQQTIEVSTTDGskQTLSYDRFILATGSTTFMPPIPGLTEY-GFSVSTledAEKLDqhlknlankpAN 151
Cdd:COG0492 73 EILLEEVTSVDKDDGPFRVTTDDG--TEYEAKAVIIATGAGPRKLGLPGEEEFeGRGVSY---CATCD----------GF 137
|
170
....*....|....*...
gi 445966278 152 AARN-TVVVAGGGLTGLE 168
Cdd:COG0492 138 FFRGkDVVVVGGGDSALE 155
|
|
| PRK14989 |
PRK14989 |
nitrite reductase subunit NirD; Provisional |
81-274 |
1.96e-07 |
|
nitrite reductase subunit NirD; Provisional
Pssm-ID: 184951 [Multi-domain] Cd Length: 847 Bit Score: 53.20 E-value: 1.96e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 81 KINADQQTIEVSTtdgsKQTLSYDRFILATGSTTFMPPIPGL-TEYGFSVSTLEDaekldqhLKNLANKPANAARNTVVv 159
Cdd:PRK14989 84 TINRQEKVIHSSA----GRTVFYDKLIMATGSYPWIPPIKGSeTQDCFVYRTIED-------LNAIEACARRSKRGAVV- 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 160 aGGGLTGLETVTEmperLRNILGET---DARVVLVDSSIDigAAMGDQaatvIREALNELGVEGKAGLRVTALDATG--- 233
Cdd:PRK14989 152 -GGGLLGLEAAGA----LKNLGVEThviEFAPMLMAEQLD--QMGGEQ----LRRKIESMGVRVHTSKNTLEIVQEGvea 220
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 445966278 234 ---VTLSNGEKIETETVIWTAGMRAnpltsqiageKDNLGRLMG 274
Cdd:PRK14989 221 rktMRFADGSELEVDFIVFSTGIRP----------QDKLATQCG 254
|
|
| PRK13512 |
PRK13512 |
coenzyme A disulfide reductase; Provisional |
79-256 |
6.83e-07 |
|
coenzyme A disulfide reductase; Provisional
Pssm-ID: 184103 [Multi-domain] Cd Length: 438 Bit Score: 50.94 E-value: 6.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 79 VDKINADQQTIEVSTTDGSKQ-TLSYDRFILATGSTTFMPPIPglTEYGFSVSTLEDAEKLDQHLKNlankpaNAARNTV 157
Cdd:PRK13512 81 VIAINDERQTVTVLNRKTNEQfEESYDKLILSPGASANSLGFE--SDITFTLRNLEDTDAIDQFIKA------NQVDKAL 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 158 VVaGGGLTGLETVTEMPERlrnilgetDARVVLVDSSIDIGAAMGDQAATVIREALNELGVEGKAGLRVTALDATGVTLS 237
Cdd:PRK13512 153 VV-GAGYISLEVLENLYER--------GLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEIDAINGNEVTFK 223
|
170
....*....|....*....
gi 445966278 238 NGEKIETETVIWTAGMRAN 256
Cdd:PRK13512 224 SGKVEHYDMIIEGVGTHPN 242
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
17-328 |
2.21e-06 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 49.41 E-value: 2.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 17 AALAAQRAIHLAsqeQNIEVMMISPSpnvgiRPRL-YEAVLENMNPDISELLTVVdVKFLAGW--VDKINA-----DQQT 88
Cdd:PRK06292 51 ALIAAAEAFHEA---KHAEEFGIHAD-----GPKIdFKKVMARVRRERDRFVGGV-VEGLEKKpkIDKIKGtarfvDPNT 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 89 IEVSTtdgskQTLSYDRFILATGSTtfMPPIPGLtEYGFSVS--TLEDAEKLDqHLknlankPANaarntVVVAGGGLTG 166
Cdd:PRK06292 122 VEVNG-----ERIEAKNIVIATGSR--VPPIPGV-WLILGDRllTSDDAFELD-KL------PKS-----LAVIGGGVIG 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 167 LET----------VTeMPERLRNILGETDARVVlvdssidigaamgDQAATVIREALN-ELG-----VEGKAGLRVTALD 230
Cdd:PRK06292 182 LELgqalsrlgvkVT-VFERGDRILPLEDPEVS-------------KQAQKILSKEFKiKLGakvtsVEKSGDEKVEELE 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 231 ATGvtlsNGEKIETETVIWTAGMRANplTSQIAGEK-----DNLGRLMGDAYLhVPEAKNIFVTGDTVkvptddlgnfNV 305
Cdd:PRK06292 248 KGG----KTETIEADYVLVATGRRPN--TDGLGLENtgielDERGRPVVDEHT-QTSVPGIYAAGDVN----------GK 310
|
330 340
....*....|....*....|....
gi 445966278 306 MSCQHAMSL-GRVAGYNAAAELVD 328
Cdd:PRK06292 311 PPLLHEAADeGRIAAENAAGDVAG 334
|
|
| MerA |
TIGR02053 |
mercury(II) reductase; This model represents the mercuric reductase found in the mer operon ... |
4-296 |
2.83e-06 |
|
mercury(II) reductase; This model represents the mercuric reductase found in the mer operon for the detoxification of mercury compounds. MerA is a FAD-containing flavoprotein which reduces Hg(II) to Hg(0) utilizing NADPH. [Cellular processes, Detoxification]
Pssm-ID: 273944 [Multi-domain] Cd Length: 463 Bit Score: 49.34 E-value: 2.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 4 RIIIAGSGFAGLWAALAAQraihlasqEQNIEVMMISPSP------NVGIRPR--------------------------- 50
Cdd:TIGR02053 2 DLVIIGSGAAAFAAAIKAA--------ELGASVAMVERGPlggtcvNVGCVPSkmllraaevahyarkppfgglaatvav 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 51 LYEAVLENMNPDISELLTVVDVKFLAGW-VDKIN-----ADQQTIEVsttDGSKQTLSYDRFILATGSTTFMPPIPGLTE 124
Cdd:TIGR02053 74 DFGELLEGKREVVEELRHEKYEDVLSSYgVDYLRgrarfKDPKTVKV---DLGREVRGAKRFLIATGARPAIPPIPGLKE 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 125 YGFSVStlEDAEKLDQHLKNLankpanaarntvVVAGGGLTGLEtvtemperLRNILGETDARVVLVDSSIDIGAAMGDQ 204
Cdd:TIGR02053 151 AGYLTS--EEALALDRIPESL------------AVIGGGAIGVE--------LAQAFARLGSEVTILQRSDRLLPREEPE 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 205 AATVIREALNELGVE--GKAGLRVTALDATGVTLSN-----GEKIETETVIWTAGMRAN--PLTSQIAGEK-DNLGRLMG 274
Cdd:TIGR02053 209 ISAAVEEALAEEGIEvvTSAQVKAVSVRGGGKIITVekpggQGEVEADELLVATGRRPNtdGLGLEKAGVKlDERGGILV 288
|
330 340
....*....|....*....|..
gi 445966278 275 DAYLHVpEAKNIFVTGDTVKVP 296
Cdd:TIGR02053 289 DETLRT-SNPGIYAAGDVTGGL 309
|
|
| PRK06416 |
PRK06416 |
dihydrolipoamide dehydrogenase; Reviewed |
84-293 |
2.80e-05 |
|
dihydrolipoamide dehydrogenase; Reviewed
Pssm-ID: 235798 [Multi-domain] Cd Length: 462 Bit Score: 45.91 E-value: 2.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 84 ADQQTIEVSTTDGSkQTLSYDRFILATGSTTFMppIPGLTEYGFSVSTLEDAEKLDQHLKNLankpanaarntvVVAGGG 163
Cdd:PRK06416 117 VDPNTVRVMTEDGE-QTYTAKNIILATGSRPRE--LPGIEIDGRVIWTSDEALNLDEVPKSL------------VVIGGG 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 164 LTGLE------------TVTEMperLRNILGETDArvvlvdssidigaamgdQAATVIREALNELGVEGKAGLRVTALDA 231
Cdd:PRK06416 182 YIGVEfasayaslgaevTIVEA---LPRILPGEDK-----------------EISKLAERALKKRGIKIKTGAKAKKVEQ 241
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 445966278 232 TG----VTLSNGEKIET---ETVIWTAGMRANplTSQI----AGEKDNLGRLMGDAYLH--VPeakNIFVTGDTV 293
Cdd:PRK06416 242 TDdgvtVTLEDGGKEETleaDYVLVAVGRRPN--TENLgleeLGVKTDRGFIEVDEQLRtnVP---NIYAIGDIV 311
|
|
| PRK06370 |
PRK06370 |
FAD-containing oxidoreductase; |
84-219 |
8.22e-05 |
|
FAD-containing oxidoreductase;
Pssm-ID: 235787 [Multi-domain] Cd Length: 463 Bit Score: 44.42 E-value: 8.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 84 ADQQTIEVsttDGskQTLSYDRFILATGSTTFMPPIPGLTEYGF-SVSTLEDAEKLDQHLknlankpanaarntvVVAGG 162
Cdd:PRK06370 120 ESPNTVRV---GG--ETLRAKRIFINTGARAAIPPIPGLDEVGYlTNETIFSLDELPEHL---------------VIIGG 179
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 445966278 163 GLTGLETvTEMPERLrnilgetDARVVLVDSSIDIGAAMGDQAATVIREALNELGVE 219
Cdd:PRK06370 180 GYIGLEF-AQMFRRF-------GSEVTVIERGPRLLPREDEDVAAAVREILEREGID 228
|
|
| PRK07251 |
PRK07251 |
FAD-containing oxidoreductase; |
79-256 |
1.09e-04 |
|
FAD-containing oxidoreductase;
Pssm-ID: 180907 [Multi-domain] Cd Length: 438 Bit Score: 43.97 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 79 VDKINAD-----QQTIEVSTTDgSKQTLSYDRFILATGSTTFMPPIPGLTE-YGFSVSTleDAEKLDQHLKNLAnkpana 152
Cdd:PRK07251 91 VDLYDAEahfvsNKVIEVQAGD-EKIELTAETIVINTGAVSNVLPIPGLADsKHVYDST--GIQSLETLPERLG------ 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 153 arntvvVAGGGLTGLETVTemperLRNILGetdARVVLVDSSIDIGAAMGDQAATVIREALNELGVEGKAGLRVTALDAT 232
Cdd:PRK07251 162 ------IIGGGNIGLEFAG-----LYNKLG---SKVTVLDAASTILPREEPSVAALAKQYMEEDGITFLLNAHTTEVKND 227
|
170 180
....*....|....*....|....*..
gi 445966278 233 G---VTLSNGEKIETETVIWTAGMRAN 256
Cdd:PRK07251 228 GdqvLVVTEDETYRFDALLYATGRKPN 254
|
|
| TGR |
TIGR01438 |
thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member ... |
85-256 |
1.63e-04 |
|
thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member of the pyridine nucleotide disulfide oxidoreductase family contains a C-terminal motif Cys-SeCys-Gly, where SeCys is selenocysteine encoded by TGA (in some sequence reports interpreted as a stop codon). In some members of this subfamily, Cys-SeCys-Gly is replaced by Cys-Cys-Gly. The reach of the selenium atom at the C-term arm of the protein is proposed to allow broad substrate specificity.
Pssm-ID: 273624 [Multi-domain] Cd Length: 484 Bit Score: 43.69 E-value: 1.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 85 DQQTIEVSTTDGSKQTLSYDRFILATGSTTFMPPIPGLTEYGFSvstledaeklDQHLKNLANKPAnaarNTVVVaGGGL 164
Cdd:TIGR01438 126 DKHRIKATNKKGKEKIYSAERFLIATGERPRYPGIPGAKELCIT----------SDDLFSLPYCPG----KTLVV-GASY 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 165 TGLETVTEMPERLRNIlgetdarVVLVDSSIDIGaaMGDQAATVIREALNELGVEGKAGL---RVTALDA-TGVTLSNGE 240
Cdd:TIGR01438 191 VALECAGFLAGIGLDV-------TVMVRSILLRG--FDQDCANKVGEHMEEHGVKFKRQFvpiKVEQIEAkVLVEFTDST 261
|
170
....*....|....*....
gi 445966278 241 KI---ETETVIWTAGMRAN 256
Cdd:TIGR01438 262 NGieeEYDTVLLAIGRDAC 280
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
157-239 |
9.97e-04 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 37.57 E-value: 9.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 157 VVVAGGGLTGLetvtEMPERLRNiLGetdARVVLVDSSIDIGAAMGDQAATVIREALNELGVEGKAGLRVTAL----DAT 232
Cdd:pfam00070 2 VVVVGGGYIGL----ELAGALAR-LG---SKVTVVERRDRLLPGFDPEIAKILQEKLEKNGIEFLLNTTVEAIegngDGV 73
|
....*..
gi 445966278 233 GVTLSNG 239
Cdd:pfam00070 74 VVVLTDG 80
|
|
| PRK07846 |
PRK07846 |
mycothione reductase; Reviewed |
85-291 |
1.32e-03 |
|
mycothione reductase; Reviewed
Pssm-ID: 181142 [Multi-domain] Cd Length: 451 Bit Score: 40.71 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 85 DQQTIEVSTTDgskqTLSYDRFILATGSTTFMPPIPGLTEYGFSVS-TLEDAEKLDQHLknlankpanaarntvVVAGGG 163
Cdd:PRK07846 115 GPKTLRTGDGE----EITADQVVIAAGSRPVIPPVIADSGVRYHTSdTIMRLPELPESL---------------VIVGGG 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 164 LTGLEtvtemperLRNILGETDARVVLVDSSidiGAAMGDQAATvIREALNELG---VEGKAGLRVTALDATG----VTL 236
Cdd:PRK07846 176 FIAAE--------FAHVFSALGVRVTVVNRS---GRLLRHLDDD-ISERFTELAskrWDVRLGRNVVGVSQDGsgvtLRL 243
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 445966278 237 SNGEKIETETVIWTAGMRANP--LTSQIAG-EKDNLGRLMGDAYLHVPeAKNIFVTGD 291
Cdd:PRK07846 244 DDGSTVEADVLLVATGRVPNGdlLDAAAAGvDVDEDGRVVVDEYQRTS-AEGVFALGD 300
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
3-111 |
4.76e-03 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 38.64 E-value: 4.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 445966278 3 KRIIIAGSGFAGLWAALAAQRAihlasqeqNIEVMMISPSPnvgirprlyeAVLENMNPDISELLTVV----DVKFLAGW 78
Cdd:COG0446 125 KRAVVIGGGPIGLELAEALRKR--------GLKVTLVERAP----------RLLGVLDPEMAALLEEElrehGVELRLGE 186
|
90 100 110
....*....|....*....|....*....|....
gi 445966278 79 -VDKINADQQtIEVSTTDGskQTLSYDRFILATG 111
Cdd:COG0446 187 tVVAIDGDDK-VAVTLTDG--EEIPADLVVVAPG 217
|
|
| |
