|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10683 |
PRK10683 |
putrescine transporter subunit: membrane component of ABC superfamily; Provisional |
1-317 |
0e+00 |
|
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
Pssm-ID: 182646 Cd Length: 317 Bit Score: 612.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 1 MSTLEPAAQSKPPGGFKLWLSQLQMKHGRKLVIALPYIWLILLFLLPFLIVFKISLGEMARAIPPYTELMEWADGQLSIT 80
Cdd:PRK10683 1 MSTLEPPARSKPPGGFKLWLARLQMKHGRKLVIALPYLWLILLFLLPFLIVFKISLAEMARAIPPYTDLMEWADGQLSIT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 81 LNLGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKN 160
Cdd:PRK10683 81 LNLGNFLQLTDDPLYFDAYLQSLQVAAISTLCCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 161 NGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGG 240
Cdd:PRK10683 161 NGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYLPFMVLPIYTALTRIDYSLVEAALDLGARPLKTFFSVIVPLTKGG 240
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446027589 241 IIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKSVGEHG 317
Cdd:PRK10683 241 IIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKSVGEHG 317
|
|
| PotB |
COG1176 |
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
73-317 |
2.83e-108 |
|
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];
Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 316.70 E-value: 2.83e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 73 ADGQLSITLNLGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVY 152
Cdd:COG1176 43 PYGGVVPGFTLENYARLFTDPLYLKVLLRTLWIALLTTLICLLLGYPIAYFLARAPPRWRNLLLLLVILPFWTSFLVRTY 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 153 AWMGILKNNGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTV 232
Cdd:COG1176 123 AWIVLLGRNGLLNSLLLALGLIDEPLRLLYTEFAVVIGLVYVYLPFMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRV 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 233 IVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKS 312
Cdd:COG1176 203 ILPLSLPGIIAGSLLVFIPALGAFVTPALLGGGKVLMIGNLIYQQFLSALNWPLAAALAVVLLLIVLLVLLLYLRLLRRR 282
|
....*
gi 446027589 313 VGEHG 317
Cdd:COG1176 283 RLLGG 287
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
99-299 |
7.40e-19 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 82.71 E-value: 7.40e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 99 YLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWmgilknngvlnnfLLWLGVIDQPL 178
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLL-------------VLLFGVLLGWG 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 179 TILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVI 258
Cdd:cd06261 68 ILPGLGLPALILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFAL 147
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 446027589 259 PELLGGPDSIMI--GRVLWQEFFNNRDWPVASAVAIIMLLLLI 299
Cdd:cd06261 148 VSFLGGGEAPGPgtGLLLIFAILFPGDLGVAAAVALILLLLSL 190
|
|
| PhnU2 |
TIGR03262 |
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ... |
83-296 |
1.49e-16 |
|
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 274495 [Multi-domain] Cd Length: 546 Bit Score: 80.11 E-value: 1.49e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 83 LGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHS----KPSTRNILLLLVILPSWTSFLIRVYaWMGil 158
Cdd:TIGR03262 40 LANFAEYFATPGLLQSLGNSLTVSAIVTAIVVPLAFAFAYALTRSripgKGAFRLVALLPLLAPSLLPAISLIY-LFG-- 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 159 kNNGVLNNFLLwLGVIDQPLTILhtnlavyIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTK 238
Cdd:TIGR03262 117 -NQGLLKGLLG-GFSIYGFWGIV-------IGEVFYTFPHALMILVTALSLADGRLYEAARAMGASPWRTFFTVTLPGAK 187
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 446027589 239 GGIIAGSMLVFIPAVGEFVIPELLGGpDSIMIGRVLWQEFFNNRDWPVASAVAIIMLL 296
Cdd:TIGR03262 188 YGLISAAFVVFTLVITDFGVPKVIGG-DYNVLATDIYKQVIGQQNFPMGAVVGVLLLL 244
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
117-313 |
6.02e-13 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 66.17 E-value: 6.02e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 117 GYPLAWAVA-HSKPSTRNILLLLVILPSWTSFLIrvyawmgilknngvlnnFLLWLGVIDQPLTILHTNLAVYIGIVYAY 195
Cdd:pfam00528 1 GIPLGIIAAlRRGRRLDRLLRPLIDLLQALPSFV-----------------LAILLVVIAILSILGHGILPAIILALLGW 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 196 VPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGG--PDSIMIGRV 273
Cdd:pfam00528 64 AGYARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSwpGLGLLLIEA 143
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 446027589 274 LWQEFFNNRDWPVasAVAIIMLLLLIVPIMWFHKHQQKSV 313
Cdd:pfam00528 144 ILGYDYPEIQGPV--LAAALILLLLNLLVDILQRLLDPRV 181
|
|
| tungstate_WtpB |
NF040839 |
tungstate ABC transporter permease WtpB; |
82-300 |
6.58e-10 |
|
tungstate ABC transporter permease WtpB;
Pssm-ID: 468778 Cd Length: 250 Bit Score: 58.49 E-value: 6.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 82 NLGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKNN 161
Cdd:NF040839 29 DPGDLSKALHDPEVIKSLLVSLYAALIATLIALIFGVPLGYILARKDFKGKSFVEAIIDIPIVIPHSVVGIMLLVVFYGT 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 162 GVLNNFLLWLGVIDQpltilhtnlavYIGIVYAY----VPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLT 237
Cdd:NF040839 109 GIGGASKIGLKIVDN-----------FWGIVVAMlfvsAPFMINSARDGFLSVDEELEHVARTLGASKLRTFFTISLPLA 177
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446027589 238 KGGIIAGSMLVFIPAVGEF-VIPELLGGPdsiMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIV 300
Cdd:NF040839 178 KRSIVSGAIMTWARGISEVgAILIVAYYP---KTAPVLIYERFNNFGLSASKPIAVILILISLA 238
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10683 |
PRK10683 |
putrescine transporter subunit: membrane component of ABC superfamily; Provisional |
1-317 |
0e+00 |
|
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
Pssm-ID: 182646 Cd Length: 317 Bit Score: 612.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 1 MSTLEPAAQSKPPGGFKLWLSQLQMKHGRKLVIALPYIWLILLFLLPFLIVFKISLGEMARAIPPYTELMEWADGQLSIT 80
Cdd:PRK10683 1 MSTLEPPARSKPPGGFKLWLARLQMKHGRKLVIALPYLWLILLFLLPFLIVFKISLAEMARAIPPYTDLMEWADGQLSIT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 81 LNLGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKN 160
Cdd:PRK10683 81 LNLGNFLQLTDDPLYFDAYLQSLQVAAISTLCCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 161 NGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGG 240
Cdd:PRK10683 161 NGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYLPFMVLPIYTALTRIDYSLVEAALDLGARPLKTFFSVIVPLTKGG 240
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446027589 241 IIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKSVGEHG 317
Cdd:PRK10683 241 IIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKSVGEHG 317
|
|
| PotB |
COG1176 |
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
73-317 |
2.83e-108 |
|
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];
Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 316.70 E-value: 2.83e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 73 ADGQLSITLNLGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVY 152
Cdd:COG1176 43 PYGGVVPGFTLENYARLFTDPLYLKVLLRTLWIALLTTLICLLLGYPIAYFLARAPPRWRNLLLLLVILPFWTSFLVRTY 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 153 AWMGILKNNGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTV 232
Cdd:COG1176 123 AWIVLLGRNGLLNSLLLALGLIDEPLRLLYTEFAVVIGLVYVYLPFMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRV 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 233 IVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKS 312
Cdd:COG1176 203 ILPLSLPGIIAGSLLVFIPALGAFVTPALLGGGKVLMIGNLIYQQFLSALNWPLAAALAVVLLLIVLLVLLLYLRLLRRR 282
|
....*
gi 446027589 313 VGEHG 317
Cdd:COG1176 283 RLLGG 287
|
|
| potB |
PRK09497 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
78-300 |
1.75e-68 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 181910 Cd Length: 285 Bit Score: 215.32 E-value: 1.75e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 78 SITLNLGNFLQLTDdPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGI 157
Cdd:PRK09497 45 KMVFTLDNYTRLLD-PLYAEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 158 LKNNGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLT 237
Cdd:PRK09497 124 LSTKGYLNEFLLWLGVIDTPIRIMFTESAVIIGLVYILLPFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLT 203
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446027589 238 KGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAI----IMLLLLIV 300
Cdd:PRK09497 204 MPGIIAGCLLVLLPAMGMFYVSDLLGGAKNLLIGNVIKSQFLNIRDWPFGAATSItltiVMGLMLLV 270
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
78-300 |
3.89e-32 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 125.27 E-value: 3.89e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 78 SITLNLGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGI 157
Cdd:COG1178 35 AFTDGLANFWALLSDPYLWRALGNTLLLALLVTLLSLLLGVPLAWLLARTDFPGRRLLRWLLLLPLALPPYVVALAWIAL 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 158 LKNNGVLNNFLLWLGVIDQPLtiLHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLT 237
Cdd:COG1178 115 FGPNGLLNTLLRALFGLEPPD--IYGLGGIILVLVLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLL 192
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446027589 238 KGGIIAGSMLVFIPAVGEFVIPELLGGPDSiMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIV 300
Cdd:COG1178 193 RPAIAAGALLVFLLCLADFGTPLVLGGGYT-TLTTAIYQAWLGDFDLGAAAALALVLLLLVLL 254
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
83-302 |
8.56e-31 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 116.75 E-value: 8.56e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 83 LGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIrvyawMGIlknng 162
Cdd:COG1177 47 LRWYAELFSDPRLLDALLNSLLIALLSTLLATVLGTPAALALARYRFRGRRLLLALLLLPLVVPGIV-----LGV----- 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 163 vlnNFLLWLGVIDQPLTILhtnlavyiGIVYAYV----PFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTK 238
Cdd:COG1177 117 ---ALLLLFSALGLSGGLW--------GLILAHVvftlPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIA 185
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446027589 239 GGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDwPVASAVAIIMLLLLIVPI 302
Cdd:COG1177 186 PGILAGALLAFTLSFDEFVITLFLAGPGVTTLPVYIYSMIRRGIS-PEINALSTLLILLSLLLL 248
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
77-307 |
1.21e-25 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 106.78 E-value: 1.21e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 77 LSITLNLGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPswtsflirvYAWMG 156
Cdd:COG1178 318 LDDNLTLDNYRFVLLDPSLLRALLNSLLLALLAALLAVLLALLLAYLVRRRRGRLARLLDRLAMLP---------YAVPG 388
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 157 IlknngVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPL 236
Cdd:COG1178 389 I-----VLGLGLLLLFNRPLPLLLYGTLAILVLAYVVRFLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPL 463
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446027589 237 TKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQeFFNNRDWPVASAVAIIMLLLLIVPIMWFHK 307
Cdd:COG1178 464 LRPGLLAAALLVFVTSMKELSATLLLRPPGFETLAVLIYQ-LASSGRYGEAAALALLLVLVSLLPVLLLER 533
|
|
| ModB |
COG4149 |
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ... |
102-256 |
5.89e-25 |
|
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis
Pssm-ID: 443320 [Multi-domain] Cd Length: 223 Bit Score: 100.12 E-value: 5.89e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 102 SLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILP-----SWTSFLIRVyawmgILKNNGVLNNFLLWLGVIdq 176
Cdd:COG4149 12 SLKVALIATLLLLLLGIPLAWWLARTRFRGKGLLEALVTLPlvlppTVLGFYLLL-----LFGRNGPLGQLLEELFGI-- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 177 plTILHTNLAVYIG-IVYAYvPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGE 255
Cdd:COG4149 85 --SLVFTWTGAVLAsVVVSL-PLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGE 161
|
.
gi 446027589 256 F 256
Cdd:COG4149 162 F 162
|
|
| UgpA |
COG1175 |
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; |
83-313 |
6.47e-23 |
|
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440788 [Multi-domain] Cd Length: 298 Bit Score: 95.97 E-value: 6.47e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 83 LGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVaHSKPSTRNILLLLVILPSWTSFLIRVYAWMGIL-KNN 161
Cdd:COG1175 62 LDNYARLFTDPRFWNALGNTLLFTVVSVPLQLVLGLLLALLL-NRKLRGRGFFRTLFFLPWVISPVVVALIWKWLFnPDY 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 162 GVLNNFLLWLGvIDQPLTILHTNLAVY---IGIVYAYVPFMVLPIYTALIRIDYSLVEAA-LDlGARPLKTFFTVIVPLT 237
Cdd:COG1175 141 GLLNALLGALG-LEPINWLGDPSLALPaviIVTVWKGTGFNMLIFLAGLQSIPRELYEAArID-GASPWQRFRRITLPLL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 238 KGGIIAGSMLVFIPAVGEFVIPELL--GGPD--SIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKSV 313
Cdd:COG1175 219 RPTILFVLVLSTIGALQVFDLVYVLtgGGPGnsTTTLVLYIYQTAFQQFDFGYASAIAVVLFLIILVLTLLQLRLLRRRE 298
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
99-299 |
7.40e-19 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 82.71 E-value: 7.40e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 99 YLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWmgilknngvlnnfLLWLGVIDQPL 178
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLL-------------VLLFGVLLGWG 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 179 TILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVI 258
Cdd:cd06261 68 ILPGLGLPALILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFAL 147
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 446027589 259 PELLGGPDSIMI--GRVLWQEFFNNRDWPVASAVAIIMLLLLI 299
Cdd:cd06261 148 VSFLGGGEAPGPgtGLLLIFAILFPGDLGVAAAVALILLLLSL 190
|
|
| CysU |
COG0555 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
78-297 |
2.50e-18 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440321 [Multi-domain] Cd Length: 268 Bit Score: 82.88 E-value: 2.50e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 78 SITLNLGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPswtsF---------- 147
Cdd:COG0555 35 AAGLGWAEFWAVLTSPRVLAALKLSLGTALIAALINLVFGLPLAWVLVRYRFPGKRLVDALVDLP----Falptavagia 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 148 LIRVYAwmgilkNNGVLNNFLLWLGvidqpLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLK 227
Cdd:COG0555 111 LLLLFG------PNGWLGQLLAPLG-----IKVAFTPLGIVLAQTFVSLPFVVRTVQPVLEELDPELEEAAATLGASRWQ 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 228 TFFTVIVPLTKGGIIAGSMLVFIPAVGEF--VIpeLLGG---------PDSIMIGRvlwQEFfnnrDWPVASAVAIIMLL 296
Cdd:COG0555 180 TFRRVILPLLLPALLTGFALAFARALGEFgaVI--FIAGnlpmkteilPLLIYLKL---EEG----DYAGATAIALVLLL 250
|
.
gi 446027589 297 L 297
Cdd:COG0555 251 I 251
|
|
| PRK15050 |
PRK15050 |
2-aminoethylphosphonate transport system permease PhnU; Provisional |
81-297 |
1.27e-17 |
|
2-aminoethylphosphonate transport system permease PhnU; Provisional
Pssm-ID: 237888 [Multi-domain] Cd Length: 296 Bit Score: 81.59 E-value: 1.27e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 81 LNLGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAH-----SKPSTRNILLLLvilpSWTSFLIRVyAWM 155
Cdd:PRK15050 57 LGLATYRAVLGSPDFRGALLTTLQIAFASTAGCLVLGVLLALVLAFvpfpgASLVGRFIDTFV----AFPSFLITL-AFT 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 156 GILKNNGVLNNFLLWL-GVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIV 234
Cdd:PRK15050 132 FLYGSAGSVNIALQRLfGLEAPPLDFLYSPGGVILAEITFYTPFVVRPLLAAFAQLDARQLEAAASLGASPWRVARRVIL 211
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446027589 235 PLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLL 297
Cdd:PRK15050 212 PEAWPALAAGGSLCLLLTLNEFGIVLFTGAKDVVTLPVLIYSKAIVDFDYPTACAIAVVNLAL 274
|
|
| PhnU2 |
TIGR03262 |
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ... |
83-296 |
1.49e-16 |
|
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 274495 [Multi-domain] Cd Length: 546 Bit Score: 80.11 E-value: 1.49e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 83 LGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHS----KPSTRNILLLLVILPSWTSFLIRVYaWMGil 158
Cdd:TIGR03262 40 LANFAEYFATPGLLQSLGNSLTVSAIVTAIVVPLAFAFAYALTRSripgKGAFRLVALLPLLAPSLLPAISLIY-LFG-- 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 159 kNNGVLNNFLLwLGVIDQPLTILhtnlavyIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTK 238
Cdd:TIGR03262 117 -NQGLLKGLLG-GFSIYGFWGIV-------IGEVFYTFPHALMILVTALSLADGRLYEAARAMGASPWRTFFTVTLPGAK 187
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 446027589 239 GGIIAGSMLVFIPAVGEFVIPELLGGpDSIMIGRVLWQEFFNNRDWPVASAVAIIMLL 296
Cdd:TIGR03262 188 YGLISAAFVVFTLVITDFGVPKVIGG-DYNVLATDIYKQVIGQQNFPMGAVVGVLLLL 244
|
|
| cysT |
CHL00187 |
sulfate transport protein; Provisional |
85-256 |
1.07e-15 |
|
sulfate transport protein; Provisional
Pssm-ID: 214388 [Multi-domain] Cd Length: 237 Bit Score: 75.05 E-value: 1.07e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 85 NFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVL 164
Cdd:CHL00187 43 DFLQKATEPIALSAYSLTLSMALIAALINGFFGLLIAWVLVRYNFPGKRLLDAAVDLPFALPTSVAGLTLATVYGDNGWI 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 165 NNFLLWLGvidqpLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAG 244
Cdd:CHL00187 123 GHLLSHLG-----IQIVFTKLGVLLAMIFVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTG 197
|
170
....*....|..
gi 446027589 245 SMLVFIPAVGEF 256
Cdd:CHL00187 198 LALTFSRAIGEY 209
|
|
| modB |
PRK09421 |
molybdate ABC transporter permease subunit; |
93-256 |
6.79e-15 |
|
molybdate ABC transporter permease subunit;
Pssm-ID: 181841 Cd Length: 229 Bit Score: 72.65 E-value: 6.79e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 93 PLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNIL-----LLLVILPSWTSFLIRVYawMGilkNNGVLNNF 167
Cdd:PRK09421 5 DPEWQAVLLSLKVSSVAVLFSLPFGILVAWLLARCRFPGKSLLdsllhLPLVLPPVVTGYLLLIS--MG---RRGFIGQW 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 168 LL-WLGVidqPLTILHTNLAVYIGIVyAYvPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSM 246
Cdd:PRK09421 80 LYeWFGI---SFAFSWRGAALAAAVM-AF-PLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTV 154
|
170
....*....|
gi 446027589 247 LVFIPAVGEF 256
Cdd:PRK09421 155 LAFARSLGEF 164
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
117-313 |
6.02e-13 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 66.17 E-value: 6.02e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 117 GYPLAWAVA-HSKPSTRNILLLLVILPSWTSFLIrvyawmgilknngvlnnFLLWLGVIDQPLTILHTNLAVYIGIVYAY 195
Cdd:pfam00528 1 GIPLGIIAAlRRGRRLDRLLRPLIDLLQALPSFV-----------------LAILLVVIAILSILGHGILPAIILALLGW 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 196 VPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGG--PDSIMIGRV 273
Cdd:pfam00528 64 AGYARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSwpGLGLLLIEA 143
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 446027589 274 LWQEFFNNRDWPVasAVAIIMLLLLIVPIMWFHKHQQKSV 313
Cdd:pfam00528 144 ILGYDYPEIQGPV--LAAALILLLLNLLVDILQRLLDPRV 181
|
|
| UgpE |
COG0395 |
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ... |
80-303 |
1.09e-11 |
|
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440164 [Multi-domain] Cd Length: 282 Bit Score: 63.96 E-value: 1.09e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 80 TLNLGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILK 159
Cdd:COG0395 57 EFTLENYRAAFTDGPFGRYLLNSLIVAVVSTVLSLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLIPLYLLFR 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 160 NNGVLNNFLlwlgvidqPLTILHTNLAVyigivyayvPFMVLPIYTALIRIDYSLVEAA-LDlGARPLKTFFTVIVPLTK 238
Cdd:COG0395 137 QLGLLNTYW--------GLILPYLAFGL---------PFGIFLLRQFFRSIPRELEEAArID-GASEFRIFWRIVLPLSK 198
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446027589 239 GGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNR--DWPVASAVAIIMLL--LLIVPIM 303
Cdd:COG0395 199 PALATVAIFTFIGAWNDFLWPLILLTSPDLRTLPVGLASFQGQYgtDWGLLMAAAVIATLpvLILFLFL 267
|
|
| tungstate_WtpB |
NF040839 |
tungstate ABC transporter permease WtpB; |
82-300 |
6.58e-10 |
|
tungstate ABC transporter permease WtpB;
Pssm-ID: 468778 Cd Length: 250 Bit Score: 58.49 E-value: 6.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 82 NLGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKNN 161
Cdd:NF040839 29 DPGDLSKALHDPEVIKSLLVSLYAALIATLIALIFGVPLGYILARKDFKGKSFVEAIIDIPIVIPHSVVGIMLLVVFYGT 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 162 GVLNNFLLWLGVIDQpltilhtnlavYIGIVYAY----VPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLT 237
Cdd:NF040839 109 GIGGASKIGLKIVDN-----------FWGIVVAMlfvsAPFMINSARDGFLSVDEELEHVARTLGASKLRTFFTISLPLA 177
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446027589 238 KGGIIAGSMLVFIPAVGEF-VIPELLGGPdsiMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIV 300
Cdd:NF040839 178 KRSIVSGAIMTWARGISEVgAILIVAYYP---KTAPVLIYERFNNFGLSASKPIAVILILISLA 238
|
|
| COG4132 |
COG4132 |
ABC-type uncharacterized transport system, permease component [General function prediction ... |
83-306 |
1.79e-08 |
|
ABC-type uncharacterized transport system, permease component [General function prediction only];
Pssm-ID: 443307 [Multi-domain] Cd Length: 286 Bit Score: 54.81 E-value: 1.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 83 LGNFLQLTDdPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPS-TRNILLLLVILPSWTSFLIRVYAWMGILKNN 161
Cdd:COG4132 50 LANYAELTS-PFYLQAFWNSIWLSLASALIGAVIGLLLAYALRRGGPGwLRRAVLAFSGVASNFAGVPLAFAFIATLGRN 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 162 GVLNNFLLWLGVidqplTILHT-NLAVYIG--IVYAY--VPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPL 236
Cdd:COG4132 129 GLVTLLLKQLGI-----DLYDGfNLYSFWGliLVYLYfqIPLMVLLLYPALDGLRREWREAAALLGASRWQYWRRVALPV 203
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446027589 237 TKGGIIAGSMLVFIPAVGEFVIPELLGGPDS----IMIGRVLWQEFFNNRDwpVASAVAIIMLLLLIVpIMWFH 306
Cdd:COG4132 204 LAPSLLGTFLLLFANAFGAYATAYALTGGNYnlvpIRIGALISGDVLLDPN--LGAALALGMIVIMAL-VMALY 274
|
|
| PRK10971 |
PRK10971 |
sulfate/thiosulfate ABC transporter permease CysT; |
76-316 |
1.30e-07 |
|
sulfate/thiosulfate ABC transporter permease CysT;
Pssm-ID: 182873 Cd Length: 277 Bit Score: 52.06 E-value: 1.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 76 QLSiTLNLGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWM 155
Cdd:PRK10971 38 QLS-QMSWAQYWEVITNPQVVAAYKVTLLSAFVASIFNAVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLA 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 156 GILKNNGVlnnFLLWLGVIDqpLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVP 235
Cdd:PRK10971 117 SLFSVNGW---YGEWLAKFD--IKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLP 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 236 LTKGGIIAGSMLVFIPAVGEFVIPELLGGP-------DSIMIgRVLWQEFfnnrDWPVASAVAIIML---LLLIVPIMWF 305
Cdd:PRK10971 192 ELSPALLAGVALSFTRSLGEFGAVIFIAGNiawktevTSLMI-FVRLQEF----DYPAASAIASVILaasLLLLFSINTL 266
|
250
....*....|.
gi 446027589 306 HKHQQKSVGEH 316
Cdd:PRK10971 267 QSRFGRRVVGH 277
|
|
| PRK10592 |
PRK10592 |
putrescine transporter subunit: membrane component of ABC superfamily; Provisional |
203-267 |
5.15e-07 |
|
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
Pssm-ID: 182574 Cd Length: 281 Bit Score: 50.24 E-value: 5.15e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446027589 203 IYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDS 267
Cdd:PRK10592 159 ISSRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFVSGPGA 223
|
|
| TauC |
COG0600 |
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ... |
86-299 |
1.41e-06 |
|
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440365 [Multi-domain] Cd Length: 254 Bit Score: 48.61 E-value: 1.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 86 FLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPSwtsflIRVYAWMGIlknngvln 165
Cdd:COG0600 50 LVELLASGELWEHLLASLLRVLLGFALAALLGVPLGLLLGLSRLLRRLLDPLLVFLRP-----IPPLALAPL-------- 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 166 nFLLWLGVIDQPLTILhtnlavyigIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGS 245
Cdd:COG0600 117 -LILWFGIGEASKIFV---------IFLGAFFPILLNTAAGVRSVDPELLELARSLGASRWQILRKVVLPAALPYIFTGL 186
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 446027589 246 MLVFIPAVGEFVIPELLGGPDSimIGRVLWQEFFNNRdwpVASAVAIIMLLLLI 299
Cdd:COG0600 187 RIALGLAWIGLVVAELLGASSG--LGYLILDARQLLD---TDLVFAAILVIGLL 235
|
|
| PstC |
COG0573 |
ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
102-255 |
1.54e-06 |
|
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440338 [Multi-domain] Cd Length: 303 Bit Score: 48.93 E-value: 1.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 102 SLQVAAISticcLLIGYPLAWAVA-----HSKPSTRNILL----LLVILPSwtsflIrVYAWMGILknngVLNNFLL-WL 171
Cdd:COG0573 82 TLLVSLIA----LLIAVPLGLGIAiflseYAPPRLRRILKpaieLLAGIPS-----V-VYGFWGLF----VLVPLLRdLF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 172 GVIDQPLTILhtnlAVyiGIVYAyvpFMVLPIYTALIR-----IDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSM 246
Cdd:COG0573 148 PWPPSGFSLL----TA--GIVLA---IMILPTITSLSRdalraVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVI 218
|
....*....
gi 446027589 247 LVFIPAVGE 255
Cdd:COG0573 219 LGLGRALGE 227
|
|
| potC |
PRK09500 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
196-266 |
3.50e-06 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 236542 [Multi-domain] Cd Length: 256 Bit Score: 47.67 E-value: 3.50e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446027589 196 VPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPD 266
Cdd:PRK09500 139 LPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLALPAVAAGWLLSFTLSLDDVVVSSFVTGPS 209
|
|
| phosphate_pstC |
TIGR02138 |
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ... |
199-265 |
2.91e-05 |
|
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273992 [Multi-domain] Cd Length: 295 Bit Score: 44.95 E-value: 2.91e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446027589 199 MVLPIYTALIRIDYSLV-----EAALDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGP 265
Cdd:TIGR02138 161 MILPTIASISRDALRAVprsykEASYALGATKWETIRRVILPAARSGIVGAVVLGLGRALGETMAVTMVIGN 232
|
|
| PRK10561 |
PRK10561 |
sn-glycerol-3-phosphate ABC transporter permease UgpA; |
83-236 |
7.36e-05 |
|
sn-glycerol-3-phosphate ABC transporter permease UgpA;
Pssm-ID: 182550 [Multi-domain] Cd Length: 280 Bit Score: 43.66 E-value: 7.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 83 LGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRnILLLLVILPSWTSFLIRVYAWMGILK-NN 161
Cdd:PRK10561 41 LDNFVALFHDSYYLDSFWTTIKFSTLVTVSGLLVSLFFAALVDYVVRGSR-FYQTLMLLPYAVAPAVAAVLWIFLFNpGR 119
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446027589 162 GVLNNFLLWLGVI-DQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPL 236
Cdd:PRK10561 120 GLITHFLAEFGYDwNHAQNSGQAMFLVVFASVWKQISYNFLFFFAALQSIPRSLVEAAAIDGAGPIRRFFKLALPL 195
|
|
| PhnU2 |
TIGR03262 |
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ... |
76-252 |
6.30e-04 |
|
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 274495 [Multi-domain] Cd Length: 546 Bit Score: 41.20 E-value: 6.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 76 QLSITLNLGNFLQLTDDplYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSK--PSTRNILLLLVILPSWTSFLIrvya 153
Cdd:TIGR03262 313 NLSLTLKHYNFDLMDGG--GWEAYKNSLRLAATTALIGTILVFGGAYLIEKTRgfGLLRGVLRFLAILPMAVPGLV---- 386
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 154 wMGIlknngvlnNFLLWLGVIDQPLTILHTNLAVYI--GIVYAY-VPFMVlpIYTALIRIDYSLVEAALDLGARPLKTFF 230
Cdd:TIGR03262 387 -LGL--------GYIFFFNAPTNPLNGLYGTMALLVlcTVVHFYtVSHLT--AVTALKQIDSEFEAVSASLKVPFYKTFL 455
|
170 180
....*....|....*....|..
gi 446027589 231 TVIVPLTKGGIIAGSMLVFIPA 252
Cdd:TIGR03262 456 RVTLPVCLPAILDIARYLFVNS 477
|
|
| 3a0107s02c |
TIGR00974 |
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ... |
198-300 |
9.53e-03 |
|
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273373 Cd Length: 271 Bit Score: 37.21 E-value: 9.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446027589 198 FMVLPIYT-----ALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGE------------FVIPE 260
Cdd:TIGR00974 137 LLILPVIIrtteeALKAVPKDLREASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGEtapllftaggsaFTPPN 216
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 446027589 261 LLGGPDS--IMIGRVLwQEFFNNRDWPVASAVAIIMLLLLIV 300
Cdd:TIGR00974 217 LFDPFATlpVLIYNLA-SEGPYVEAQQLAWAAALVLIVLVLL 257
|
|
| |
