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Conserved domains on  [gi|446065662|ref|WP_000143517|]
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MULTISPECIES: molecular chaperone [Enterobacteriaceae]

Protein Classification

molecular chaperone( domain architecture ID 11459711)

molecular chaperone belonging to the periplasmic pilus chaperone family may be involved in fimbrial biogenesis; similar to Escherichia coli fimbrial chaperones, YraI, YqiH, YbgP and ElfD

CATH:  2.60.40.10
Gene Ontology:  GO:0061077|GO:0030288|GO:0043711
PubMed:  1683764|8670884
SCOP:  4002248|4007561

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
14-222 3.13e-69

P pilus assembly protein, chaperone PapD [Extracellular structures];


:

Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 212.54  E-value: 3.13e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  14 ASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKlPYLAYSWLENEKG----EKSDDLLVALPPIQRLEPKATTQVRIV 89
Cdd:COG3121   17 ASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDDWDQdagpDKATAPFVVTPPLFRLEPGKSQTVRII 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  90 KQAstAKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVElQLQVSQQGNQLTLKNPT 169
Cdd:COG3121   96 RTG--PPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAE-KLTWSLVGNGLTVTNPG 172

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446065662 170 AYYLTIAYLGRNEKGVFPGFKTVMIAPFST----VNTNTGSYSGSQFYLGYMDDYGA 222
Cdd:COG3121  173 PYYVTLSDLSLGAGGKKLKKGLGMVLPGSTrrwpLPAGASLAAGGKVTWATINDYGG 229
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
14-222 3.13e-69

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 212.54  E-value: 3.13e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  14 ASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKlPYLAYSWLENEKG----EKSDDLLVALPPIQRLEPKATTQVRIV 89
Cdd:COG3121   17 ASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDDWDQdagpDKATAPFVVTPPLFRLEPGKSQTVRII 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  90 KQAstAKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVElQLQVSQQGNQLTLKNPT 169
Cdd:COG3121   96 RTG--PPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAE-KLTWSLVGNGLTVTNPG 172

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446065662 170 AYYLTIAYLGRNEKGVFPGFKTVMIAPFST----VNTNTGSYSGSQFYLGYMDDYGA 222
Cdd:COG3121  173 PYYVTLSDLSLGAGGKKLKKGLGMVLPGSTrrwpLPAGASLAAGGKVTWATINDYGG 229
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 14-236 2.11e-60

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 190.76  E-value: 2.11e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  14 ASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLVALPPIQRLEPKATTQVRIVKQAS 93
Cdd:PRK15274  20 APLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPA 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  94 TAKLPGDRETLFFYNMREIPPAPEKNSdhaVLQVAIQSRIKVFWRPAALRKKAGEKVELQ--LQVSQQGNQLTLKNPTAY 171
Cdd:PRK15274 100 AASLPQDRESLFYFNVREIPPKSDKPN---TLQLALQTRIKFFYRPVAVARQVDKTHPWQtkLTLTYQGDGVIFDNPTPF 176

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446065662 172 YLTIAYLGRNEKGVFPGFKTVMIAPFSTVNTN-TGSYSGSQFYLGYMDDYGALRMTTLNCSGE-CRL 236
Cdd:PRK15274 177 YLVISNAGSKENETASGFKNLLIAPREKVTSPiKGASLGSSPVVGYVDDYGGHRLLVFTCSGNtCKV 243
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 22-142 8.08e-44

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 143.88  E-value: 8.08e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662   22 LQPDRTRIVFNANDKATSLRVDNRSDKlPYLAYSWLENEKGEKSDDL----LVALPPIQRLEPKATTQVRIVKQAstAKL 97
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDN-PYLVQSWVDDGNEEGTDEKakapFIVTPPLFRLEPGQEQVLRIYTTG--PPL 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 446065662   98 PGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAAL 142
Cdd:pfam00345  78 PTDRESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPAGL 122
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
14-222 3.13e-69

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 212.54  E-value: 3.13e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  14 ASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKlPYLAYSWLENEKG----EKSDDLLVALPPIQRLEPKATTQVRIV 89
Cdd:COG3121   17 ASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDDWDQdagpDKATAPFVVTPPLFRLEPGKSQTVRII 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  90 KQAstAKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVElQLQVSQQGNQLTLKNPT 169
Cdd:COG3121   96 RTG--PPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAE-KLTWSLVGNGLTVTNPG 172

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446065662 170 AYYLTIAYLGRNEKGVFPGFKTVMIAPFST----VNTNTGSYSGSQFYLGYMDDYGA 222
Cdd:COG3121  173 PYYVTLSDLSLGAGGKKLKKGLGMVLPGSTrrwpLPAGASLAAGGKVTWATINDYGG 229
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 14-236 2.11e-60

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 190.76  E-value: 2.11e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  14 ASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLVALPPIQRLEPKATTQVRIVKQAS 93
Cdd:PRK15274  20 APLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPA 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  94 TAKLPGDRETLFFYNMREIPPAPEKNSdhaVLQVAIQSRIKVFWRPAALRKKAGEKVELQ--LQVSQQGNQLTLKNPTAY 171
Cdd:PRK15274 100 AASLPQDRESLFYFNVREIPPKSDKPN---TLQLALQTRIKFFYRPVAVARQVDKTHPWQtkLTLTYQGDGVIFDNPTPF 176

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446065662 172 YLTIAYLGRNEKGVFPGFKTVMIAPFSTVNTN-TGSYSGSQFYLGYMDDYGALRMTTLNCSGE-CRL 236
Cdd:PRK15274 177 YLVISNAGSKENETASGFKNLLIAPREKVTSPiKGASLGSSPVVGYVDDYGGHRLLVFTCSGNtCKV 243
PRK15285 PRK15285
fimbrial chaperone StfD;
18-243 4.10e-55

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 177.28  E-value: 4.10e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  18 SHAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLVALPPIQRLEPKATTQVRIVKQASTAKL 97
Cdd:PRK15285  23 AQAAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKITSPLIVVPPVQRIEPSAIGQVKIQGMPALASL 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  98 PGDRETLFFYNMREIPPAPEKNSdhaVLQVAIQSRIKVFWRPAALRK-KAGEKVELQLQVSQQGNQLTLKNPTAYYLTIA 176
Cdd:PRK15285 103 PQDRETLFYYNVREIPPQSDKPN---TLQIALQTRIKVFYRPQALSKiDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLS 179

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662 177 YLGRNEKGV-FPGFKTVMIAPFSTVNT-NTGSYSGSQFYLGYMDDYGALRMTTLNCS-GECRLQAVEAKK 243
Cdd:PRK15285 180 NASNRMDGTpARGFSPLVIAPKSNVTLgGDASELGHSPVLTYVNDYGARLPLIFNCTdNSCAVDEAKSRK 249
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 18-230 3.15e-50

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 164.18  E-value: 3.15e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  18 SHAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLvALPPIQRLEPKATTQVRIVK-QASTAK 96
Cdd:PRK15254  14 SPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDALM-ALPPLQRIDAGQKSQVRITQvRGLTDK 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  97 LPGDRETLFFYNMREIPPapeKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIA 176
Cdd:PRK15254  93 LPQDRETLFWFNVRGVPP---KPEDDNVLQLAMQSQLKLFYRPKAIIRSSSDQPERKLTAERNAGHLTLRNPTPYYITVA 169

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 446065662 177 YLGRNEKGVFPGF-KTVMIAPFSTVNTNTGSYSGSQ-FYLGYMDDYGALRMTTLNC 230
Cdd:PRK15254 170 WLGADRSHRLSGFrEGVMVPPLGSLPLKAVLPAETRtLWVGYIDDYGGLQMNRYAC 225
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 22-142 8.08e-44

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 143.88  E-value: 8.08e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662   22 LQPDRTRIVFNANDKATSLRVDNRSDKlPYLAYSWLENEKGEKSDDL----LVALPPIQRLEPKATTQVRIVKQAstAKL 97
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDN-PYLVQSWVDDGNEEGTDEKakapFIVTPPLFRLEPGQEQVLRIYTTG--PPL 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 446065662   98 PGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAAL 142
Cdd:pfam00345  78 PTDRESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPAGL 122
lfpB PRK15290
fimbrial chaperone;
27-223 1.66e-36

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 128.95  E-value: 1.66e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  27 TRIVFNANDKATSLRVDNRSDKLPYLAYSWLEN-EKGEKSDDLLVALPPIQRLEPKATTQVRIVKQASTAkLPGDRETLF 105
Cdd:PRK15290  44 TRVVYLSNNPDKSISVFSKEEKIPYLIQAWVDPfNKEDKSKAPFTVIPPVSRLEPSQEKVLRIIHTKGVS-LPDDRESVF 122

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662 106 FYNMREIPPApEKNSDHAVLQVAIQSRIKVFWRPAALR---KKAGEKVELQlqvsQQGNQLTLKNPTAYYLTIAYLGRNE 182
Cdd:PRK15290 123 WLNIKNIPPS-ASNKATNSLEIAVKTRIKLFWRPASIRlipEDAAPKVKWR----REGRNLIAENPNPIHISVMDVIVDG 197

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 446065662 183 KGVfpgfKTVMIAPFSTVNTN--TGSySGSQFYLGYMDDYGAL 223
Cdd:PRK15290 198 HDV----PLNMIRPFETLTLPlpANS-AGGQMTWRFINDYGAV 235
PRK09926 PRK09926
fimbrial chaperone;
27-221 1.19e-35

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 126.76  E-value: 1.19e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  27 TRIVFNANDKATSLRVDNRSDKlPYLAYSWLENekGEKSDDL------LVALPPIQRLEPKATTQVRIVKQASTAkLPGD 100
Cdd:PRK09926  32 TRIIYKSDQKDVNVRLENKGNN-PLLVQSWLDT--GDDNAEPgsikvpFTATPPVSRIDPKRGQTIKLMYTASTA-LPKD 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662 101 RETLFFYNMREIPPAP--EKNSDHAVLQVAIQSRIKVFWRPAALRKKAGE---KVELQLQVSQQGNQLTLKNPTAYYLTI 175
Cdd:PRK09926 108 RESVFWFNVLEVPPKPdaEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEaplALKWSWAGSEGKASLRVTNPTPYYVSF 187

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 446065662 176 aylgrNEKGVFPGFKTV-----MIAPFS----TVNTNTGSYSGSQFYLGYMDDYG 221
Cdd:PRK09926 188 -----SSGDLEAGGKRYpvdskMIAPFSdesmKVKGLSGKASSGKVHFYAINDFG 237
PRK15211 PRK15211
fimbrial chaperone;
18-229 7.74e-35

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 124.16  E-value: 7.74e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  18 SHAALQPDRTRIVFNANDKATSLRVDNRSDKLpYLAYSWLENEKGEKSDDLLVALPPIQRLEPKATTQVRIVKQASTakL 97
Cdd:PRK15211  20 AMAAFVLNGTRFIYDEGRKNISFEVTNQADQT-YGGQVWIDNTTQGSSTVYMVPAPPFFKVRPKEKQIIRIMKTDSA--L 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  98 PGDRETLFFYNMREIPPAPeKNSDHAVLQVAIQSRIKVFWRPAALRKKAgEKVELQLQVSQQGNQLTLKNPTAYYLTIAY 177
Cdd:PRK15211  97 PKDRESLFWLNVQEIPPKP-KASEGNVLAVALNTQVKLIYRPKALKEGR-ENAEKNLQIIHRGGETYLKNPTPYYFAVTG 174

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 446065662 178 LGRNEKGVFPGFKT----VMIAPFSTVNTNTGSySGSQFYLGYMDDYGALRMTTLN 229
Cdd:PRK15211 175 VKLNGQPVKLSDRVmneiAQLAPFSEVSLGKLS-LNGTVTVQAVNDWGGTQDYTLK 229
PRK15195 PRK15195
molecular chaperone FimC;
27-223 1.25e-33

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 121.12  E-value: 1.25e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  27 TRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLVAlPPIQRLEPKATTQVRIVKQASTakLPGDRETLFF 106
Cdd:PRK15195  32 TRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGVKEKSFIVT-PPLFVSEPKSENTLRIIYAGPP--LAADRESLFW 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662 107 YNMREIPPAPEKNSD-HAVLQVAIQSRIKVFWRPAALRKKAGEKVElQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGV 185
Cdd:PRK15195 109 MNVKAIPSVDKNALEgRNVLQLAILSRIKLFVRPINLQELPEEAPD-TLKFSRSGNHLKVHNPSPYYVTLVNLQVGSQKL 187

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 446065662 186 fpgfKTVMIAPfsTVNTNTGSYSGSQFYLGY--MDDYGAL 223
Cdd:PRK15195 188 ----GNAMIAP--KVNSQIPLPSGVQGKLKFqtVNDYGAV 221
PRK15295 PRK15295
fimbrial assembly chaperone;
13-199 3.38e-32

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 117.35  E-value: 3.38e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  13 VASLCSHAALQPDRTRIVFNANDKATSLRVDNRsDKLPYLAYSWLE-NEKGEKSDDLLVALPPIQRLEPKATTQVRIVKq 91
Cdd:PRK15295  12 LTSHVAHASIVVGGTRLVFDGNNDESSINVENK-DSKANLVQSWLSvVDPQVTNKQAFIITPPLFRLDAGQKNSIRVIR- 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  92 aSTAKLPGDRETLFFYNMREIPpAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQVSQQGNQLTLKNPTAY 171
Cdd:PRK15295  90 -SGAPLPADRESMYWLNIKGIP-SIDDNASANRVEISINTQIKLIYRPPALTKSTPDSQSQQLKWQTAGDVITVNNPTPY 167

                        170       180
                 ....*....|....*....|....*...
gi 446065662 172 YLTIAYLGRNEKGVFPGFktvMIAPFST 199
Cdd:PRK15295 168 YMNFASVTLNSHEVKSAT---FVPPKSS 192
PRK15208 PRK15208
molecular chaperone LpfB;
27-222 4.73e-30

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 111.93  E-value: 4.73e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  27 TRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLVAlPPIQRLEPKATTQVRIVKQASTakLPGDRETLFF 106
Cdd:PRK15208  28 TRVIYDGSKKEASLTVNNKSKTEEFLIQSWIDDANGNKKTPFIIT-PPLFKLDPTKNNVLRIVNITNT--LPQDRESVYW 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662 107 YNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVElQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVf 186
Cdd:PRK15208 105 INVKAIPAKSEDAENKNVLQIAVRTRLKLFYRPAGLKGNSMDAWN-KLRFTRAGNQIKVENPSAFNLTFNQFYANGRDI- 182

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 446065662 187 pgFKTVMIAPFSTVNTN--TGSYSGSQFYLGYMDDYGA 222
Cdd:PRK15208 183 --EKAGMVPAKGSLNIElpAGTGKVSEVKYNIINDFGT 218
PRK15246 PRK15246
fimbrial assembly chaperone;
20-227 5.97e-30

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 111.59  E-value: 5.97e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  20 AALQPDRTRIVFNANDKATSLRVDNRSDKlPYLAYSWLE----NEKGEKSDDLLVALPPIQRLEPKATTQVRIVkQASTA 95
Cdd:PRK15246  10 AAVNIDRTRIIFASDDVAQSLTLSNDNTT-PMLLQVWTDagniDASPDNSKTPLVALPPVFKMQPGELRTLRLL-LSSRQ 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  96 KLPGDRETLFFYNMREIPPAPEKNSDHA-VLQVAIQSRIKVFWRPAALrKKAGEKVELQLQVSQQGNQLTLKNPTAYYLT 174
Cdd:PRK15246  88 QLATDRESLFWLNIYQIPPVTQDIKNHPrKLVLPLRLRLKILIRPTGL-KAPTEAEEKKLRFIAKENTIRIVNPTSWYMS 166

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 446065662 175 IAYLGRNEKGVfpgfKTVMIAPFS--TVNTNTGSYSGSQFYLGYMDDYGALRMTT 227
Cdd:PRK15246 167 LTLTMDNKKSI----GDIMVAPKTalDVPLTRSPTPGASINYAVINDSGNWRQYT 217
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 14-222 2.24e-28

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 107.56  E-value: 2.24e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  14 ASLCSHAALQPDRTRIVFNANDKATSLRVDNrSDKLPYLAYSWLEN--EKGEKSDDLLVALPPIQRLEPKATTQVRIVKQ 91
Cdd:PRK15299  16 GSLAHAAGINIGTTRVIFHGDAKDASISISN-SDNVPYLIQSWAQSisETGASGDAPFMVTPPLFRLNGGQKNVLRIIRT 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  92 ASTakLPGDRETLFFYNMREIPPAPEKNSdHAVLQVAIQSRIKVFWRPAALRKKAgEKVELQLQVSQQGNQLTLKNPTAY 171
Cdd:PRK15299  95 GGN--LPEDRESLYWLDIKSIPSSNPDNK-HNTLMLAVKAEFKLIYRPKALTQKP-EEVADRLTWSRQGRTLTVKNPTPY 170

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 446065662 172 YLTIAYLGRNEKGV-FPGFktvmIAPFSTVNTNTGSYSGSQFYLGYMDDYGA 222
Cdd:PRK15299 171 YMNFATLSVGSQKVkAPRY----VAPFGNAQYTLPAAASGPIAWSIINDFGG 218
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 16-221 2.49e-28

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 107.44  E-value: 2.49e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  16 LCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLPyLAYSWLENEKG----EKSDDLLVALPPIQRLEPKATTQVRIVKQ 91
Cdd:PRK15253  29 LPAHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQAS-LVQSWIDDGNTslppEKIQVPFMLTPPVARVAAESGQQIKIKKM 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  92 ASTakLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRP---AALRKKAGEKvelqLQVSQQGNQLTLKNP 168
Cdd:PRK15253 108 PNS--LPDNKESLFYLNVLDIPPNSQENAGKNVLKFAMQNRIKLIWRPsriAAVTKDSFQR----IGLFRSNKTVIMKND 181

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 446065662 169 TAYYLTIAYLGRNEKGVfpGFKTVMIAPFSTVNTNTGSYSGSQFYLGYMDDYG 221
Cdd:PRK15253 182 TANWITVTDVKAGNTKI--NDQTIMLPPLSTQNINMKYASTSQYEVTIIDDNG 232
PRK15249 PRK15249
fimbrial chaperone;
27-199 1.33e-24

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 97.95  E-value: 1.33e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  27 TRIVFNANDKATSLRVDNrSDKLPYLAYSWLEN----EKGEKSDDL-LVALPPIQRLEPKATTQVRIVKQASTaKLPGDR 101
Cdd:PRK15249  35 SRIIYPSTASSVDVQLKN-NDAIPYIVQTWFDDgdmnTSPENSSAMpFIATPPVFRIQPKAGQVVRVIYNNTK-KLPQDR 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662 102 ETLFFYNMREIPPAPEKN-SDHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQV---SQQGNQLTLKNPTAYYLTIAY 177
Cdd:PRK15249 113 ESVFWFNVLQVPPTNIGSdSGQNKMLVMLRSRIKLFYRPDGLGKPDNLAKKLQIKTvnkGSGKSGIVIVNPQPWFASLSN 192

                        170       180
                 ....*....|....*....|..
gi 446065662 178 LGRNEKGVFPGFKTVMIAPFST 199
Cdd:PRK15249 193 LNVKVNGASYNLDADMIAPFSS 214
PRK15218 PRK15218
fimbrial assembly chaperone;
27-221 6.69e-23

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 92.74  E-value: 6.69e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  27 TRIVFNANDKATSLRVDNrSDKLPYLAYSWLENEKG----EKSDDLLVALPPIQRLEPKATTQVRIVKQAStaKLPGDRE 102
Cdd:PRK15218  25 TRIIYPAQKKDITVQLMN-DGKRSSLIQAWIDNGDTslppEKLQVPFIMTPPVIRVAANSGQQLKIKKLAN--NLPGDRE 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662 103 TLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALrKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNE 182
Cdd:PRK15218 102 SLFYLNVLDIPPNSDENKDKNIIKFALQNRIKLIYRPPGV-QKVDKATFSRLQLLRAPGSISVKNNSANWITIPEIKAKS 180

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 446065662 183 KgvfPGFKTVMIAPFSTvNTNTGSYSGSQFYLGYMDDYG 221
Cdd:PRK15218 181 K---VNKETLLLAPWSS-QSITTTVVVNSYTVTLIDDSG 215
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 27-222 1.41e-21

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 89.44  E-value: 1.41e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  27 TRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLVAlPPIQRLEPKATTQVRIVKQASTakLPGDRETLFF 106
Cdd:PRK15188  34 TRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIIT-PPLFVIQPKKENILRIMYVGPS--LPTDRESVFY 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662 107 YNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALrKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVf 186
Cdd:PRK15188 111 LNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNL-AEAPAHAPSTLRCRNERGQLTITNPSPYYVSMVELYSAGKKL- 188

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 446065662 187 pgfKTVMIAPFSTVntnTGSYSGSQFYLGYMDDYGA 222
Cdd:PRK15188 189 ---PNTMVPPKGAI---TLPATPGQVSLRTVNDFGA 218
PRK15224 PRK15224
pili assembly chaperone PapD;
27-176 9.32e-16

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 74.01  E-value: 9.32e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  27 TRIVFNANDKATSLRVDNRSDkLPYLAYSWLENEKGEKSDDLLVaLPPIQRLEPKATTQVRIVKqaSTAKLPGDRETLFF 106
Cdd:PRK15224  35 TRVIYHAGTAGATLSVSNPQN-YPILVQSSVKAADKSSPAPFLV-MPPLFRLEANQQSQLRIVR--TGGDMPTDRETLQW 110

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446065662 107 YNMREIPPAPEKNSDHAV-----LQVAIQSRIKVFWRPAALrKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIA 176
Cdd:PRK15224 111 VCIKAVPPENEPSDTQAKgatldLNLSINVCDKLIFRPDAV-KGTPEDVAGNLRWVETGNKLKVENPTPFYMNLA 184
PRK11385 PRK11385
fimbrial chaperone;
27-185 3.29e-15

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 72.47  E-value: 3.29e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  27 TRIVFNANDKATSLRVDNRSDKlpylaySWLENEK---------GEKSD--DLLVALPPIQRLEPKATTQVRIVKQASTA 95
Cdd:PRK11385  33 TRFIFPADRESISILLTNTSQE------SWLINSKinrptrwagGEASTvpAPLLAAPPLILLKPGTTGTLRLLRTESDI 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  96 kLPGDRETLFFYNMREIPPAPEKNSDhavLQVAIQSRIKVFWRPAALrkkAGEKVELQLQV----SQQGNQLTlkNPTAY 171
Cdd:PRK11385 107 -LPVDRETLFELSIASVPSGKVENQS---VKVAMRSVFKLFWRPEGL---PGDPLEAYQQLrwtrNSQGVQLT--NPTPY 177

                        170
                 ....*....|....
gi 446065662 172 YLTIAYLGRNEKGV 185
Cdd:PRK11385 178 YINLIQVSVNGKAL 191
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 13-171 1.44e-14

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 70.45  E-value: 1.44e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  13 VASLCSHAA-LQPDRTRIVFNANDKATSLRVDNrSDKLPYLAYSWLENEKGEKSDDLLVAlPPIQRLEPKATTQVRIVKQ 91
Cdd:PRK09918  16 SSSSAVHAAgMVPETSVVIVEESDGEGSINVKN-TDSNPILLYTTLVDLPEDKSKLLLVT-PPVARVEPGQSQQVRFILK 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  92 ASTaklPGDRETLFFYNMREIPPAPEKNSdhaVLQVAIQSRIKVFWRPAAL-RKKAGEKVelqLQVSQQGNQLTLKNPTA 170
Cdd:PRK09918  94 SGS---PLNTEHLLRVSFEGVPPKPGGKN---KVVMPIRQDLPVLIQPAALpVVRDPWKL---LVWSISGNNLVVSNPSP 164


                 .
gi 446065662 171 Y 171
Cdd:PRK09918 165 Y 165
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 165-224 8.09e-14

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 64.21  E-value: 8.09e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446065662  165 LKNPTAYYLTIAYLGRNEKGVFPGFKTVMIAPFST--VNTNTGSYSGSQFYLGYMDDYGALR 224
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGGKELALDPGMVAPFSSqtFAGLPAPAAGGTVSYTYINDYGGIV 62
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
27-203 6.58e-13

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 65.88  E-value: 6.58e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  27 TRIVFNANDKATSLRVDNRSDKlpylaySWL-----------ENEKGEKSDDLLVALPPIQRLEPKATTQVRIVkqASTA 95
Cdd:PRK15192  29 TRFIYHAGAPALSVPVSNHSEA------SWLidthilpggrwPGTKNEGNITPFVVTPPLFMLSARQENSMRVV--YTGA 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  96 KLPGDRETLFFYNMREIPPA-PEKNSdhavLQVAIQSRIKVFWRPAALrkkAGEKVEL--QLQVSQQGNQLTLKNPTAYY 172
Cdd:PRK15192 101 PLPADRESLFTLSIAAIPSGkPEANR----VQMAFRSALKLLYRPEGL---AGNPQQAyrHLIWSLTPDGATVRNPTPYY 173

                        170       180       190
                 ....*....|....*....|....*....|.
gi 446065662 173 LTIAYLGRNEKGvfpGFKTVMIAPFSTVNTN 203
Cdd:PRK15192 174 VTLFLLRANERA---QDNAGVVAPFATRQTD 201
PRK15233 PRK15233
fimbrial chaperone SefB;
27-222 4.99e-11

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 60.89  E-value: 4.99e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662  27 TRIVFNANDKATSLRVDNRSDkLPYLAYSWLENEKgEKSDDLLVALPPIQRLEPKATTQVRIVKQASTakLPGDRETLFF 106
Cdd:PRK15233  47 TRVIYKEDAPSTSFWIMNEKE-YPILVQTQVYNDD-KSSKAPFIVTPPILKVESNARTRLKVIPTSNL--FNKNEESLYW 122

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446065662 107 YNMREIPPAPEKNSDHAV-------LQVAIQSRIKVFWRPAALRKKAGEKVElQLQVSQQGNQLTLKNPTAYYLTIAYL- 178
Cdd:PRK15233 123 LCVKGVPPLNDNESNNKNnittnlnVNVVTNSCIKLIYRPKTIDLTTMEIAD-KLKLERKGNSIVIKNPTSSYVNIANIk 201

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 446065662 179 -GRNEKGVFPGFktvmIAPFSTVNTNTGSYsgSQFYLGYMDDYGA 222
Cdd:PRK15233 202 sGNLSFNIPNGY----IEPFGYAQLPGGVH--SKITLTILDDNGA 240
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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