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Conserved domains on  [gi|446077503|ref|WP_000155358|]
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DUF4028 family protein [Bacillus toyonensis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4028 pfam13220
Protein of unknown function (DUF4028); This family of proteins is functionally uncharacterized. ...
 27-91 2.58e-36

Protein of unknown function (DUF4028); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 67 and 93 amino acids in length. There are two conserved sequence motifs: IVKI and YVKKWF.


:

Pssm-ID: 289962  Cd Length: 65  Bit Score: 117.16  E-value: 2.58e-36
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446077503  27 VIVKILKDSSNSFLCTVQNKNGDQYVKKWFSKHENNKELGRPTFKEVEKDWKENRESFMYPNIKA 91
Cdd:pfam13220  1 VIVKILKDSSNSFLCTVQNKNGDQYVKKWFRKHENNEELGRPTFKEVEKDWKENKESFMYPNVKA 65
 
Name Accession Description Interval E-value
DUF4028 pfam13220
Protein of unknown function (DUF4028); This family of proteins is functionally uncharacterized. ...
 27-91 2.58e-36

Protein of unknown function (DUF4028); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 67 and 93 amino acids in length. There are two conserved sequence motifs: IVKI and YVKKWF.


Pssm-ID: 289962  Cd Length: 65  Bit Score: 117.16  E-value: 2.58e-36
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446077503  27 VIVKILKDSSNSFLCTVQNKNGDQYVKKWFSKHENNKELGRPTFKEVEKDWKENRESFMYPNIKA 91
Cdd:pfam13220  1 VIVKILKDSSNSFLCTVQNKNGDQYVKKWFRKHENNEELGRPTFKEVEKDWKENKESFMYPNVKA 65
 
Name Accession Description Interval E-value
DUF4028 pfam13220
Protein of unknown function (DUF4028); This family of proteins is functionally uncharacterized. ...
 27-91 2.58e-36

Protein of unknown function (DUF4028); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 67 and 93 amino acids in length. There are two conserved sequence motifs: IVKI and YVKKWF.


Pssm-ID: 289962  Cd Length: 65  Bit Score: 117.16  E-value: 2.58e-36
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446077503  27 VIVKILKDSSNSFLCTVQNKNGDQYVKKWFSKHENNKELGRPTFKEVEKDWKENRESFMYPNIKA 91
Cdd:pfam13220  1 VIVKILKDSSNSFLCTVQNKNGDQYVKKWFRKHENNEELGRPTFKEVEKDWKENKESFMYPNVKA 65
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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