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Conserved domains on  [gi|446094064|ref|WP_000171919|]
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MULTISPECIES: DUF4242 domain-containing protein [Staphylococcus]

Protein Classification

DUF4242 domain-containing protein( domain architecture ID 10623895)

DUF4242 domain-containing protein similar to Streptomyces coelicolor SCO4226, a nickel binding protein that is probably required for nickel sequestration and/or detoxification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4242 pfam14026
Protein of unknown function (DUF4242); This family of proteins is functionally uncharacterized. ...
 95-167 2.04e-26

Protein of unknown function (DUF4242); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 90 and 170 amino acids in length. There is a single completely conserved residue C that may be functionally important.


:

Pssm-ID: 433654  Cd Length: 74  Bit Score: 95.34  E-value: 2.04e-26
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446094064   95 YLVTWNIPEGITMDQYLARKKKNSVHYEEVPEVEFKRTYVCEDMSKCICLYNAPDEEAVRRARKAVDTPIDGI 167
Cdd:pfam14026   1 YMDERDIPGGITAEDLAAAHQKSLAVLAEMPGVQWLRSYVDEDKGKVYCLYEAPDEEAVREHAERAGLPADRI 73
 
Name Accession Description Interval E-value
DUF4242 pfam14026
Protein of unknown function (DUF4242); This family of proteins is functionally uncharacterized. ...
 95-167 2.04e-26

Protein of unknown function (DUF4242); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 90 and 170 amino acids in length. There is a single completely conserved residue C that may be functionally important.


Pssm-ID: 433654  Cd Length: 74  Bit Score: 95.34  E-value: 2.04e-26
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446094064   95 YLVTWNIPEGITMDQYLARKKKNSVHYEEVPEVEFKRTYVCEDMSKCICLYNAPDEEAVRRARKAVDTPIDGI 167
Cdd:pfam14026   1 YMDERDIPGGITAEDLAAAHQKSLAVLAEMPGVQWLRSYVDEDKGKVYCLYEAPDEEAVREHAERAGLPADRI 73
 
Name Accession Description Interval E-value
DUF4242 pfam14026
Protein of unknown function (DUF4242); This family of proteins is functionally uncharacterized. ...
 95-167 2.04e-26

Protein of unknown function (DUF4242); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 90 and 170 amino acids in length. There is a single completely conserved residue C that may be functionally important.


Pssm-ID: 433654  Cd Length: 74  Bit Score: 95.34  E-value: 2.04e-26
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446094064   95 YLVTWNIPEGITMDQYLARKKKNSVHYEEVPEVEFKRTYVCEDMSKCICLYNAPDEEAVRRARKAVDTPIDGI 167
Cdd:pfam14026   1 YMDERDIPGGITAEDLAAAHQKSLAVLAEMPGVQWLRSYVDEDKGKVYCLYEAPDEEAVREHAERAGLPADRI 73
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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