|
Name |
Accession |
Description |
Interval |
E-value |
| PRK06778 |
PRK06778 |
hypothetical protein; Validated |
1-254 |
0e+00 |
|
hypothetical protein; Validated
Pssm-ID: 235860 [Multi-domain] Cd Length: 289 Bit Score: 502.92 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 1 MTTIKLIVNSVSKSERESIIAALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80
Cdd:PRK06778 36 LFMVLWIVNSVSKSERESIIAALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 81 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMA 160
Cdd:PRK06778 116 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMA 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 161 YKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTKSASDTLYQYFGQHGD 240
Cdd:PRK06778 196 YKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTKSASDTLYQYFGQHGD 275
|
250
....*....|....
gi 446129696 241 KVVQPLVQKLDKQQ 254
Cdd:PRK06778 276 KVVQPLVQKLDKQQ 289
|
|
| MotB |
COG1360 |
Flagellar motor protein MotB [Cell motility]; |
85-230 |
3.02e-41 |
|
Flagellar motor protein MotB [Cell motility];
Pssm-ID: 440971 [Multi-domain] Cd Length: 174 Bit Score: 139.59 E-value: 3.02e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 85 SINTIARDAHMEANLEMEIVPQGLRVLIKDdqnRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNN 164
Cdd:COG1360 30 ALSSALEENLLSGQVEVRITEEGLVIEIQD---RVLFDSGSAELTPEGRELLDKIAAVLAEVPNRIRVEGHTDNVPISTA 106
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446129696 165 IY-NNWNLSGDRALSARRVLEEAGMPEDKvMQVSAMADQMLLDAKN--PQSAGNRRIEIMVLTKSASDT 230
Cdd:COG1360 107 RFpSNWELSAARAAAVVRYLIEGGVPPER-LSAVGYGDTRPLAPNDtpEGRARNRRVEIVILRRAAEEA 174
|
|
| OmpA_C-like |
cd07185 |
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; ... |
121-222 |
9.47e-19 |
|
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.
Pssm-ID: 143586 [Multi-domain] Cd Length: 106 Bit Score: 78.75 E-value: 9.47e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 121 FERGSAKIMPFFKTLLVELAPVFDSLDN-KIIITGHTDAMAyknNIYNNWNLSGDRALSARRVLEEAGMPEDKvMQVSAM 199
Cdd:cd07185 6 FDFGSAELTPEAKPLLDKLAEVLKKNPDaKIRIEGHTDSRG---SDAYNQELSERRAEAVADYLVSKGVDASR-ITAVGY 81
|
90 100
....*....|....*....|....*.
gi 446129696 200 ADQMLLdAKNPQSAG---NRRIEIMV 222
Cdd:cd07185 82 GESRPI-ASNDTEEGrakNRRVEIVI 106
|
|
| type_VI_ompA |
TIGR03350 |
type VI secretion system peptidoglycan-associated domain; The flagellar motor protein MotB, ... |
99-222 |
7.58e-15 |
|
type VI secretion system peptidoglycan-associated domain; The flagellar motor protein MotB, the Gram-negative bacterial outer membrane protein OmpA (with an N-terminal outer membrane beta barrel domain) share a C-terminal peptidoglycan-associating homology region. This model describes a domain found fused to type VI secretion system homologs of the type IV system protein DotU (see model TIGR03349), with OmpA/MotB homology. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Pssm-ID: 274533 [Multi-domain] Cd Length: 137 Bit Score: 69.25 E-value: 7.58e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 99 LEMEIVPQGLRVLIKDD------QNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIY-NNWNL 171
Cdd:TIGR03350 6 LAPEIAAGLLTVDEDGDrsvvrlRGDELFASGSAEVRAEFEPLLLRIAKALAAVPGRITVVGHTDNVPIRTARFpSNWHL 85
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 446129696 172 SGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQS-AGNRRIEIMV 222
Cdd:TIGR03350 86 SEARAKAVADVLAQAGGPAGRVRAEGRGDSEPIASNATAAGrARNRRVEIDV 137
|
|
| OmpA |
pfam00691 |
OmpA family; The Pfam entry also includes MotB and related proteins which are not included in ... |
121-217 |
1.76e-13 |
|
OmpA family; The Pfam entry also includes MotB and related proteins which are not included in the Prosite family.
Pssm-ID: 425825 [Multi-domain] Cd Length: 95 Bit Score: 64.69 E-value: 1.76e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 121 FERGSAKIMPFFKTLLVELAPV--FDSLDNKIIITGHTDAMAYKNNiynNWNLSGDRALSARRVLEEAGMPEDKVMqVSA 198
Cdd:pfam00691 1 FDPGSSQLTPKAKATLDEIADLlkFPELKNTITIEGHTDTVGSAAY---NWELSQRRAEAVRRYLVNFGVPPSRIS-VVG 76
|
90
....*....|....*....
gi 446129696 199 MADQMLLDAKNPQSAGNRR 217
Cdd:pfam00691 77 YGATKPITDNKTPEGRARN 95
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK06778 |
PRK06778 |
hypothetical protein; Validated |
1-254 |
0e+00 |
|
hypothetical protein; Validated
Pssm-ID: 235860 [Multi-domain] Cd Length: 289 Bit Score: 502.92 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 1 MTTIKLIVNSVSKSERESIIAALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 80
Cdd:PRK06778 36 LFMVLWIVNSVSKSERESIIAALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELG 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 81 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMA 160
Cdd:PRK06778 116 ELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMA 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 161 YKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTKSASDTLYQYFGQHGD 240
Cdd:PRK06778 196 YKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTKSASDTLYQYFGQHGD 275
|
250
....*....|....
gi 446129696 241 KVVQPLVQKLDKQQ 254
Cdd:PRK06778 276 KVVQPLVQKLDKQQ 289
|
|
| motB |
PRK09041 |
motility protein MotB; |
10-227 |
1.05e-46 |
|
motility protein MotB;
Pssm-ID: 236365 [Multi-domain] Cd Length: 317 Bit Score: 158.18 E-value: 1.05e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 10 SVSKSERESI---------IAALHG------QSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARdvnEKTALLKKk 74
Cdd:PRK09041 49 SSTPEQLIGIaeyfrtplkVALTGGdrssdsTSPIPGGGDDITQQDGEVNKQPNIAELAQGEKERREQ---ERLEKLKQ- 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 75 satelgELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITG 154
Cdd:PRK09041 125 ------ELDQAIESNPKLRQFKPQLLIDLTQEGLRIQIVDSQNRPMFATGSAEVEPYMRDILREIAPVLNDVPNRISLSG 198
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446129696 155 HTDAMAYKN--NIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTKSA 227
Cdd:PRK09041 199 HTDATPYANgeKGYSNWELSADRANASRRELVAGGMDEGKVLRVVGLASTMLLDKKDPLNPVNRRISIVVLNKKA 273
|
|
| MotB |
COG1360 |
Flagellar motor protein MotB [Cell motility]; |
85-230 |
3.02e-41 |
|
Flagellar motor protein MotB [Cell motility];
Pssm-ID: 440971 [Multi-domain] Cd Length: 174 Bit Score: 139.59 E-value: 3.02e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 85 SINTIARDAHMEANLEMEIVPQGLRVLIKDdqnRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNN 164
Cdd:COG1360 30 ALSSALEENLLSGQVEVRITEEGLVIEIQD---RVLFDSGSAELTPEGRELLDKIAAVLAEVPNRIRVEGHTDNVPISTA 106
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446129696 165 IY-NNWNLSGDRALSARRVLEEAGMPEDKvMQVSAMADQMLLDAKN--PQSAGNRRIEIMVLTKSASDT 230
Cdd:COG1360 107 RFpSNWELSAARAAAVVRYLIEGGVPPER-LSAVGYGDTRPLAPNDtpEGRARNRRVEIVILRRAAEEA 174
|
|
| motB |
PRK12799 |
flagellar motor protein MotB; Reviewed |
39-227 |
5.61e-31 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 119.05 E-value: 5.61e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 39 KISPSHPPKPATVAVPEETEKKA-RDVNEKTALLKKKSATELGE-LATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQ 116
Cdd:PRK12799 76 KSSSSTSPIPGGGDDPTQQVGEVrKQINSEESRQEIHRLNKLREkLDQLIESDPRLKALRPHLLINMMDEGLRIQIIDSQ 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 117 NRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNI--YNNWNLSGDRALSARRVLEEAGMPEDKVM 194
Cdd:PRK12799 156 NRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGErgYSNWELSADRANASRRELLAGGLDEGKIL 235
|
170 180 190
....*....|....*....|....*....|...
gi 446129696 195 QVSAMADQMLLDAKNPQSAGNRRIEIMVLTKSA 227
Cdd:PRK12799 236 RVVGMASTMRLKEQASDDPVNRRISILVLNKQS 268
|
|
| motB |
PRK05996 |
MotB family protein; |
42-222 |
2.34e-22 |
|
MotB family protein;
Pssm-ID: 235665 [Multi-domain] Cd Length: 423 Bit Score: 95.15 E-value: 2.34e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 42 PSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEA----------NLEMEIVPQGLRVL 111
Cdd:PRK05996 229 QAQPKKAATEEELIADAKKAATGEPAANAAKAAKPEPMPDDQQKEAEQLQAAIAQAiggvagklaeGVTVTPVEGGLLIS 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 112 IKDDQNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPED 191
Cdd:PRK05996 309 LTDQVDYGMFAIGSAVPRAELVLAMEKIGQLLAERPGAVIIRGHTDARPFKSATYDNWRLSTARAQSAYYMLVRGGLDEK 388
|
170 180 190
....*....|....*....|....*....|.
gi 446129696 192 KVMQVSAMADQMLLDAKNPQSAGNRRIEIMV 222
Cdd:PRK05996 389 RIEQVEGFADRRPKLPNDPNAAANRRIEILI 419
|
|
| OmpA_C-like |
cd07185 |
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; ... |
121-222 |
9.47e-19 |
|
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.
Pssm-ID: 143586 [Multi-domain] Cd Length: 106 Bit Score: 78.75 E-value: 9.47e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 121 FERGSAKIMPFFKTLLVELAPVFDSLDN-KIIITGHTDAMAyknNIYNNWNLSGDRALSARRVLEEAGMPEDKvMQVSAM 199
Cdd:cd07185 6 FDFGSAELTPEAKPLLDKLAEVLKKNPDaKIRIEGHTDSRG---SDAYNQELSERRAEAVADYLVSKGVDASR-ITAVGY 81
|
90 100
....*....|....*....|....*.
gi 446129696 200 ADQMLLdAKNPQSAG---NRRIEIMV 222
Cdd:cd07185 82 GESRPI-ASNDTEEGrakNRRVEIVI 106
|
|
| type_VI_ompA |
TIGR03350 |
type VI secretion system peptidoglycan-associated domain; The flagellar motor protein MotB, ... |
99-222 |
7.58e-15 |
|
type VI secretion system peptidoglycan-associated domain; The flagellar motor protein MotB, the Gram-negative bacterial outer membrane protein OmpA (with an N-terminal outer membrane beta barrel domain) share a C-terminal peptidoglycan-associating homology region. This model describes a domain found fused to type VI secretion system homologs of the type IV system protein DotU (see model TIGR03349), with OmpA/MotB homology. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Pssm-ID: 274533 [Multi-domain] Cd Length: 137 Bit Score: 69.25 E-value: 7.58e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 99 LEMEIVPQGLRVLIKDD------QNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIY-NNWNL 171
Cdd:TIGR03350 6 LAPEIAAGLLTVDEDGDrsvvrlRGDELFASGSAEVRAEFEPLLLRIAKALAAVPGRITVVGHTDNVPIRTARFpSNWHL 85
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 446129696 172 SGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQS-AGNRRIEIMV 222
Cdd:TIGR03350 86 SEARAKAVADVLAQAGGPAGRVRAEGRGDSEPIASNATAAGrARNRRVEIDV 137
|
|
| OmpA |
pfam00691 |
OmpA family; The Pfam entry also includes MotB and related proteins which are not included in ... |
121-217 |
1.76e-13 |
|
OmpA family; The Pfam entry also includes MotB and related proteins which are not included in the Prosite family.
Pssm-ID: 425825 [Multi-domain] Cd Length: 95 Bit Score: 64.69 E-value: 1.76e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 121 FERGSAKIMPFFKTLLVELAPV--FDSLDNKIIITGHTDAMAYKNNiynNWNLSGDRALSARRVLEEAGMPEDKVMqVSA 198
Cdd:pfam00691 1 FDPGSSQLTPKAKATLDEIADLlkFPELKNTITIEGHTDTVGSAAY---NWELSQRRAEAVRRYLVNFGVPPSRIS-VVG 76
|
90
....*....|....*....
gi 446129696 199 MADQMLLDAKNPQSAGNRR 217
Cdd:pfam00691 77 YGATKPITDNKTPEGRARN 95
|
|
| motB |
PRK08944 |
flagellar motor protein MotB; Reviewed |
95-223 |
2.06e-13 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 236356 [Multi-domain] Cd Length: 302 Bit Score: 68.50 E-value: 2.06e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 95 MEANLEMEIVPQGLRVLIKDDQ------NRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIY-N 167
Cdd:PRK08944 151 LAQQLEKEIEDGAIEIESLGQQiiirirEKGSFPSGSAFLQPKFKPVVRKIGELLKDVPGIITVSGHTDNVPISSELYrS 230
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 446129696 168 NWNLSGDRALSARRVLEEAGMPEDKVMQVSAMAD-QMLLDAKNPQS-AGNRRIEIMVL 223
Cdd:PRK08944 231 NWDLSSARAVAVAHELLKVKGFDPQRLKVVGMADtQPLVPNDTAENrARNRRVEIIIE 288
|
|
| motB |
PRK07734 |
flagellar motor protein MotB; Reviewed |
32-223 |
2.72e-11 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 236080 [Multi-domain] Cd Length: 259 Bit Score: 62.07 E-value: 2.72e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 32 GGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALlKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLRVL 111
Cdd:PRK07734 61 GGTGVKDFLSDQKPEDEKELSASSLEAEQAKKKEEAEAK-KKKEMEELKAVQKKIDQYIKEKQLSSSLQTKLTEEGLLIT 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 112 IKDDQnrnMFERGSAKIMPFFKTLLVELAP--VFDSLDNkIIITGHTDAMAYKNNIY-NNWNLSGDRALSARRVLEEAGM 188
Cdd:PRK07734 140 ILDNI---LFDSGKADVRLEDLPLAKEISNllVSNPPRN-ITISGHTDNVPIANAQFaSNWELSVMRAVNFMQVLLENKE 215
|
170 180 190
....*....|....*....|....*....|....*...
gi 446129696 189 PEDKVMQVSAMADQMLLdAKNPQSAG---NRRIEIMVL 223
Cdd:PRK07734 216 LDPEKFSAKGYGEYKPI-ASNDTAEGrakNRRVEVLIL 252
|
|
| OmpA |
COG2885 |
Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall ... |
121-225 |
5.24e-11 |
|
Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442131 [Multi-domain] Cd Length: 294 Bit Score: 61.72 E-value: 5.24e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 121 FERGSAKIMPFFKTLLVELAPVFDSLDN-KIIITGHTDAM---AYknniynNWNLSGDRALSARRVLEEAGMPEDKvMQV 196
Cdd:COG2885 191 FDFDSAELTPEAKAALDELAALLKENPDlRIEIEGHTDSRgsdAY------NLALSERRAEAVKDYLVSKGIPASR-ITA 263
|
90 100 110
....*....|....*....|....*....|..
gi 446129696 197 SAMADQMLLdAKNPQSAG---NRRIEIMVLTK 225
Cdd:COG2885 264 VGYGESRPV-ASNDTEEGrakNRRVEIVVLKK 294
|
|
| PRK06925 |
PRK06925 |
flagellar motor protein MotB; |
72-223 |
8.50e-10 |
|
flagellar motor protein MotB;
Pssm-ID: 235887 [Multi-domain] Cd Length: 230 Bit Score: 57.47 E-value: 8.50e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 72 KKKSATELGELATSINTIARDAHMEANLEMEIVPQGLrVLIKddQNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKII 151
Cdd:PRK06925 76 EEKQEDQLDELLKKVNEYIEENELKSVITAKRDERGV-VLVL--QEAVLFETGEADILKQAEPFLHKIGVLLSTIPNDIK 152
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446129696 152 ITGHTDAMAYKNNIY-NNWNLSGDRALSA-RRVLEEAGMPEDKVMQVSAMADQMLLDAKNPQS-AGNRRIEIMVL 223
Cdd:PRK06925 153 VEGHTDSRPISTYRYpSNWELSAARASSViRYFTSKEKLDSSRFIAVGYADTKPVVPNTTEENmQENRRVEIVIS 227
|
|
| PRK06742 |
PRK06742 |
flagellar motor protein MotS; Reviewed |
107-222 |
6.44e-08 |
|
flagellar motor protein MotS; Reviewed
Pssm-ID: 102525 [Multi-domain] Cd Length: 225 Bit Score: 51.99 E-value: 6.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 107 GLRVLIKDDQnrnMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKN-NIYNNWNLSGDRALSARRVLEE 185
Cdd:PRK06742 108 GVSVVIVDNL---IFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNdKFPSNWELSSARAANMIHHLIE 184
|
90 100 110
....*....|....*....|....*....|....*....
gi 446129696 186 AGMPEDKVMQVSAMAD-QMLLDAKNPQS-AGNRRIEIMV 222
Cdd:PRK06742 185 VYNVDDKRLAAVGYADtKPVVPNDSPQNwEKNRRVVIYI 223
|
|
| motB |
PRK06667 |
flagellar motor protein MotB; Validated |
121-224 |
1.46e-06 |
|
flagellar motor protein MotB; Validated
Pssm-ID: 180652 [Multi-domain] Cd Length: 252 Bit Score: 48.25 E-value: 1.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 121 FERGSAKI-MPFFKTLLVELAPVFDSLDN---KIIITGHTDAMAYK-NNIY-NNWNLSGDRALSARRVLEEAGMPEDKVM 194
Cdd:PRK06667 129 FYPGSAEVkLEENRETLQKIASFIGFLDLagrNFRIEGHTDNVDVNpEGPWkSNWELSGARAVNMLEYILNYGDQSESWF 208
|
90 100 110
....*....|....*....|....*....|..
gi 446129696 195 QVSAMADQ--MLLDAKNPQSAGNRRIEIMVLT 224
Cdd:PRK06667 209 QVSGFAGSrpLATEDTPEGRAYNRRIDIVILT 240
|
|
| PRK09040 |
PRK09040 |
hypothetical protein; Provisional |
120-230 |
5.00e-06 |
|
hypothetical protein; Provisional
Pssm-ID: 181620 [Multi-domain] Cd Length: 214 Bit Score: 46.16 E-value: 5.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 120 MFERGSAKIMPFFKTLLVELAP----VFDSLDNKIIITGHTDAMAYK--NNIY-NNWNLSGDRALSARRVLEEAGMPEDK 192
Cdd:PRK09040 91 LFALNSDQLQPEGRELLKSLAGplaaYLRARDEILMVSGFTDDQPVRagNRRFaDNWELSAQRALTVTRALIDAGVPASS 170
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 446129696 193 VMQVSAMADQMLldAKNPQSAG---NRRIEIMVLTKSASDT 230
Cdd:PRK09040 171 VFAAAFGSEQPV--ASNADDEGrakNRRVEIAPVPRPSASA 209
|
|
| PRK08126 |
PRK08126 |
hypothetical protein; Provisional |
120-222 |
8.72e-06 |
|
hypothetical protein; Provisional
Pssm-ID: 236157 [Multi-domain] Cd Length: 432 Bit Score: 46.22 E-value: 8.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 120 MFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIY-NNWNLSGDRALSARRVLEEAGMPEDKVMQVSA 198
Cdd:PRK08126 326 MFVPGQATVNPAMGPLIAKIAREIARVGGKVTVTGHTDNQPIRSAQFaSNLVLSEKRAAQVAQMLQSAGVPASRLEAVGK 405
|
90 100
....*....|....*....|....*
gi 446129696 199 MADQMLLDAKNPQS-AGNRRIEIMV 222
Cdd:PRK08126 406 GDAQPVADNRTPQGrAQNRRVEITV 430
|
|
| PRK07033 |
PRK07033 |
DotU family type VI secretion system protein; |
99-223 |
1.43e-05 |
|
DotU family type VI secretion system protein;
Pssm-ID: 180801 [Multi-domain] Cd Length: 427 Bit Score: 45.81 E-value: 1.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 99 LEMEIvPQGLrVLIKDDQNRN--------MFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIY-NNW 169
Cdd:PRK07033 290 LEPEI-RAGL-VAVRDEADRSvvtlrgdgLFASASTSVRDRYQPVLARVADALNQVKGNVLVTGYSDNVPIRTARFpSNW 367
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 446129696 170 NLSGDRALSARRVLE-EAGMPEDKVMQVSAMADQMlldAKNPQSAG---NRRIEIMVL 223
Cdd:PRK07033 368 ELSQARAQAVRALLAaRLGQPERVTAEGRGDSDPV---APNDSAENrarNRRVEITLL 422
|
|
| PRK09038 |
PRK09038 |
flagellar motor protein MotD; Reviewed |
120-223 |
1.48e-05 |
|
flagellar motor protein MotD; Reviewed
Pssm-ID: 181618 [Multi-domain] Cd Length: 281 Bit Score: 45.39 E-value: 1.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 120 MFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIY-NNWNLSGDRALSARRVLEEAGMPEDKVMQVSA 198
Cdd:PRK09038 136 LFGSGDAMLSDQAFAILEKVAEVLKPAPNPIHVEGFTDNVPIATAQFpSNWELSAARAASVVRLLADDGVAPSRLAAVGY 215
|
90 100
....*....|....*....|....*...
gi 446129696 199 MADQMLldAKNPQSAG---NRRIEIMVL 223
Cdd:PRK09038 216 GEFQPV--ADNDTAEGrarNRRVVLVIL 241
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
120-220 |
6.50e-05 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 43.42 E-value: 6.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446129696 120 MFERGSAKIMPFFKTLLVELAPVFDSLDNKI------II--TGHTD------AMAYKNNiynnWNLSGDRALSARRVLEE 185
Cdd:PRK09039 227 LFPTGSAELNPEGQAEIAKLAAALIELAKEIppeinwVLrvDGHTDnvplsgTGRFRDN----WELSSARAISVVKFLIA 302
|
90 100 110
....*....|....*....|....*....|....*..
gi 446129696 186 AGMPEDKVMqVSAMADQMLLDAKNPQSA--GNRRIEI 220
Cdd:PRK09039 303 LGVPADRLA-AAGFGEFQPLDPGDTPEAraRNRRIEL 338
|
|
| |
