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Conserved domains on  [gi|446132671|ref|WP_000210526|]
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MULTISPECIES: phosphonoacetaldehyde hydrolase [Acinetobacter]

Protein Classification

phosphonoacetaldehyde hydrolase( domain architecture ID 11486647)

phosphonoacetaldehyde hydrolase is a HAD (Haloacid Dehalogenase) family hydrolase that catalyzes the hydrolysis of phosphonoacetaldehyde to form acetaldehyde and phosphate

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK13478 PRK13478
phosphonoacetaldehyde hydrolase; Provisional
5-271 1.19e-149

phosphonoacetaldehyde hydrolase; Provisional


:

Pssm-ID: 184075 [Multi-domain]  Cd Length: 267  Bit Score: 418.88  E-value: 1.19e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   5 NTQIQAVVFDWAGTTVDFGSRAPILAFMALFKDNKVEITVEEARAPMGLEKRDHIAAVLKMPRVAAAWQEVYGQAATEAD 84
Cdd:PRK13478   1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITLEEARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTEAD 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671  85 IDRLYKDFIPYQLNSIPKCSALIPGALATFENIKKRGAKIGSNTGYASMMIGRLVKDAADQGYRPDCIVTASDVKYGRPY 164
Cdd:PRK13478  81 VDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPY 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671 165 PEMLWKNLIQLDVSDIKTVVKVDDTVVGIDEGLNAGCWTVGLAISGNEVGLSYEEWSALSADEQIVLKDKAYQKMNASGA 244
Cdd:PRK13478 161 PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGA 240
                        250       260
                 ....*....|....*....|....*..
gi 446132671 245 HYVIDSVADLPNILDDIERRLEQGERP 271
Cdd:PRK13478 241 HYVIDTIADLPAVIADIEARLARGERP 267
 
Name Accession Description Interval E-value
PRK13478 PRK13478
phosphonoacetaldehyde hydrolase; Provisional
5-271 1.19e-149

phosphonoacetaldehyde hydrolase; Provisional


Pssm-ID: 184075 [Multi-domain]  Cd Length: 267  Bit Score: 418.88  E-value: 1.19e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   5 NTQIQAVVFDWAGTTVDFGSRAPILAFMALFKDNKVEITVEEARAPMGLEKRDHIAAVLKMPRVAAAWQEVYGQAATEAD 84
Cdd:PRK13478   1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITLEEARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTEAD 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671  85 IDRLYKDFIPYQLNSIPKCSALIPGALATFENIKKRGAKIGSNTGYASMMIGRLVKDAADQGYRPDCIVTASDVKYGRPY 164
Cdd:PRK13478  81 VDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPY 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671 165 PEMLWKNLIQLDVSDIKTVVKVDDTVVGIDEGLNAGCWTVGLAISGNEVGLSYEEWSALSADEQIVLKDKAYQKMNASGA 244
Cdd:PRK13478 161 PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGA 240
                        250       260
                 ....*....|....*....|....*..
gi 446132671 245 HYVIDSVADLPNILDDIERRLEQGERP 271
Cdd:PRK13478 241 HYVIDTIADLPAVIADIEARLARGERP 267
phosphonatase TIGR01422
phosphonoacetaldehyde hydrolase; This enzyme catalyzes the cleavage of the carbon phosphorous ...
7-259 3.01e-118

phosphonoacetaldehyde hydrolase; This enzyme catalyzes the cleavage of the carbon phosphorous bond of a phosphonate. The mechanism depends on the substrate having a carbonyl one carbon away from the cleavage position. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. [Central intermediary metabolism, Other]


Pssm-ID: 188140 [Multi-domain]  Cd Length: 253  Bit Score: 338.94  E-value: 3.01e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671    7 QIQAVVFDWAGTTVDFGSRAPILAFMALFKDNKVEITVEEARAPMGLEKRDHIAAVLKMPRVAAAWQEVYGQAATEADID 86
Cdd:TIGR01422   1 RIEAVIFDWAGTTVDFGSFAPTGAFVEAFAEFGVQITLEEARKPMGLGKWDHIRALLKMPAVAERWQAKFGRLPTEADVQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   87 RLYKDFIPYQLNSIPKCSALIPGALATFENIKKRGAKIGSNTGYASMMIGRLVKDAADQGYRPDCIVTASDVKYGRPYPE 166
Cdd:TIGR01422  81 ALYEAFEPMQLAKLAEYASPIPGAIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAAAQGYRPDYNVTADDVPAGRPAPW 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671  167 MLWKNLIQLDVSDIKTVVKVDDTVVGIDEGLNAGCWTVGLAISGNEVGLSYEEWSALSADEQIVLKDKAYQKMNASGAHY 246
Cdd:TIGR01422 161 MALKNATELGVYDPAAVVKVGDTVPDIEEGRNAGMWTVGVILSSNELGLSEEEYRALPPAELEERRARARARLKAAGAHY 240
                         250
                  ....*....|...
gi 446132671  247 VIDSVADLPNILD 259
Cdd:TIGR01422 241 VIDTLADLPAVIA 253
HAD_PHN cd02586
Phosphonoacetaldehyde hydrolase (phosphonatase); similar to Bacillus cereus phosphonatase; ...
8-249 1.20e-116

Phosphonoacetaldehyde hydrolase (phosphonatase); similar to Bacillus cereus phosphonatase; Degradation of the ubiquitous natural phosphonate 2-aminoethylphosphonate (AEP) into useable forms of nitrogen, carbon, and phosphorus is a two-step metabolic pathway. The first step, catalyzed by AEP transaminase, involves the transfer of NH3 from AEP to pyruvate, yielding phosphonoacetaldehyde (P-Ald) and alanine. In the second step, phosphonatase catalyzes the hydrolytic P-C bond cleavage of P-Ald to form orthophosphate and acetaldehyde. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319785 [Multi-domain]  Cd Length: 242  Bit Score: 334.27  E-value: 1.20e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   8 IQAVVFDWAGTTVDFGSRAPILAFMALFKDNKVEITVEEARAPMGLEKRDHIAAVLKMPRVAAAWQEVYGQAATEADIDR 87
Cdd:cd02586    1 IEAVIFDWAGTTVDYGSFAPVNAFVEAFAQRGVQITLEEARKPMGLLKIDHIRALLEMPRVAEAWRAVFGRLPTEADVDA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671  88 LYKDFIPYQLNSIPKCSALIPGALATFENIKKRGAKIGSNTGYASMMIGRLVKDAADQGYRPDCIVTASDVKYGRPYPEM 167
Cdd:cd02586   81 LYEEFEPILIASLAEYSSPIPGVLEVIAKLRARGIKIGSTTGYTREMMDIVLPEAAAQGYRPDSLVTPDDVPAGRPYPWM 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671 168 LWKNLIQLDVSDIKTVVKVDDTVVGIDEGLNAGCWTVGLAISGNEVGLSYEEWSALSADEQIVLKDKAYQKMNASGAHYV 247
Cdd:cd02586  161 CYKNAIELGVYDVAAVVKVGDTVPDIKEGLNAGMWTVGVILSGNELGLSEEEVEALDSEELAARRAEVRQRFKAAGAHYV 240

                 ..
gi 446132671 248 ID 249
Cdd:cd02586  241 ID 242
YcjU COG0637
Beta-phosphoglucomutase, HAD superfamily [Carbohydrate transport and metabolism];
7-254 6.91e-27

Beta-phosphoglucomutase, HAD superfamily [Carbohydrate transport and metabolism];


Pssm-ID: 440402 [Multi-domain]  Cd Length: 208  Bit Score: 103.75  E-value: 6.91e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   7 QIQAVVFDWAGTTVDFgSRAPILAFMALFKDNKVEITVEEARAPMGLEKRDHIAAVLKMPRVAAAWQEVYgqaateADID 86
Cdd:COG0637    1 MIKAVIFDMDGTLVDS-EPLHARAWREAFAELGIDLTEEEYRRLMGRSREDILRYLLEEYGLDLPEEELA------ARKE 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671  87 RLYKDFipYQLNSIPkcsaLIPGALATFENIKKRGAKIGSNTGYASMMIGRLVKDAADQGYrPDCIVTASDVKYGRPYPE 166
Cdd:COG0637   74 ELYREL--LAEEGLP----LIPGVVELLEALKEAGIKIAVATSSPRENAEAVLEAAGLLDY-FDVIVTGDDVARGKPDPD 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671 167 MLWKNLIQLDVS--------DIktvvkvddtVVGIDEGLNAGCWTVGLAisgnevglsyeewSALSADEQIvlkdkayqk 238
Cdd:COG0637  147 IYLLAAERLGVDpeecvvfeDS---------PAGIRAAKAAGMRVVGVP-------------DGGTAEEEL--------- 195
                        250
                 ....*....|....*.
gi 446132671 239 mnaSGAHYVIDSVADL 254
Cdd:COG0637  196 ---AGADLVVDDLAEL 208
Hydrolase pfam00702
haloacid dehalogenase-like hydrolase; This family is structurally different from the alpha ...
8-168 8.47e-06

haloacid dehalogenase-like hydrolase; This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Swiss:P24069. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteriztic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria.


Pssm-ID: 459910 [Multi-domain]  Cd Length: 191  Bit Score: 45.27  E-value: 8.47e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671    8 IQAVVFDWAGTTVDF-----------GSRAPI-LAFMALFKDnkVEITVEEARAPMGLEKRDHIAAvLKMPRVAAAWQEV 75
Cdd:pfam00702   1 IKAVVFDLDGTLTDGepvvteaiaelASEHPLaKAIVAAAED--LPIPVEDFTARLLLGKRDWLEE-LDILRGLVETLEA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   76 YGQAATEADIDRLYKDFIPYQLnsipkcsalIPGALATFENIKKRGAKIGSNTGYASMMIGRLVKdAADQGYRPDCIVTA 155
Cdd:pfam00702  78 EGLTVVLVELLGVIALADELKL---------YPGAAEALKALKERGIKVAILTGDNPEAAEALLR-LLGLDDYFDVVISG 147
                         170
                  ....*....|...
gi 446132671  156 SDVKYGRPYPEML 168
Cdd:pfam00702 148 DDVGVGKPKPEIY 160
 
Name Accession Description Interval E-value
PRK13478 PRK13478
phosphonoacetaldehyde hydrolase; Provisional
5-271 1.19e-149

phosphonoacetaldehyde hydrolase; Provisional


Pssm-ID: 184075 [Multi-domain]  Cd Length: 267  Bit Score: 418.88  E-value: 1.19e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   5 NTQIQAVVFDWAGTTVDFGSRAPILAFMALFKDNKVEITVEEARAPMGLEKRDHIAAVLKMPRVAAAWQEVYGQAATEAD 84
Cdd:PRK13478   1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITLEEARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTEAD 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671  85 IDRLYKDFIPYQLNSIPKCSALIPGALATFENIKKRGAKIGSNTGYASMMIGRLVKDAADQGYRPDCIVTASDVKYGRPY 164
Cdd:PRK13478  81 VDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPY 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671 165 PEMLWKNLIQLDVSDIKTVVKVDDTVVGIDEGLNAGCWTVGLAISGNEVGLSYEEWSALSADEQIVLKDKAYQKMNASGA 244
Cdd:PRK13478 161 PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGA 240
                        250       260
                 ....*....|....*....|....*..
gi 446132671 245 HYVIDSVADLPNILDDIERRLEQGERP 271
Cdd:PRK13478 241 HYVIDTIADLPAVIADIEARLARGERP 267
phosphonatase TIGR01422
phosphonoacetaldehyde hydrolase; This enzyme catalyzes the cleavage of the carbon phosphorous ...
7-259 3.01e-118

phosphonoacetaldehyde hydrolase; This enzyme catalyzes the cleavage of the carbon phosphorous bond of a phosphonate. The mechanism depends on the substrate having a carbonyl one carbon away from the cleavage position. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. [Central intermediary metabolism, Other]


Pssm-ID: 188140 [Multi-domain]  Cd Length: 253  Bit Score: 338.94  E-value: 3.01e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671    7 QIQAVVFDWAGTTVDFGSRAPILAFMALFKDNKVEITVEEARAPMGLEKRDHIAAVLKMPRVAAAWQEVYGQAATEADID 86
Cdd:TIGR01422   1 RIEAVIFDWAGTTVDFGSFAPTGAFVEAFAEFGVQITLEEARKPMGLGKWDHIRALLKMPAVAERWQAKFGRLPTEADVQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   87 RLYKDFIPYQLNSIPKCSALIPGALATFENIKKRGAKIGSNTGYASMMIGRLVKDAADQGYRPDCIVTASDVKYGRPYPE 166
Cdd:TIGR01422  81 ALYEAFEPMQLAKLAEYASPIPGAIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAAAQGYRPDYNVTADDVPAGRPAPW 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671  167 MLWKNLIQLDVSDIKTVVKVDDTVVGIDEGLNAGCWTVGLAISGNEVGLSYEEWSALSADEQIVLKDKAYQKMNASGAHY 246
Cdd:TIGR01422 161 MALKNATELGVYDPAAVVKVGDTVPDIEEGRNAGMWTVGVILSSNELGLSEEEYRALPPAELEERRARARARLKAAGAHY 240
                         250
                  ....*....|...
gi 446132671  247 VIDSVADLPNILD 259
Cdd:TIGR01422 241 VIDTLADLPAVIA 253
HAD_PHN cd02586
Phosphonoacetaldehyde hydrolase (phosphonatase); similar to Bacillus cereus phosphonatase; ...
8-249 1.20e-116

Phosphonoacetaldehyde hydrolase (phosphonatase); similar to Bacillus cereus phosphonatase; Degradation of the ubiquitous natural phosphonate 2-aminoethylphosphonate (AEP) into useable forms of nitrogen, carbon, and phosphorus is a two-step metabolic pathway. The first step, catalyzed by AEP transaminase, involves the transfer of NH3 from AEP to pyruvate, yielding phosphonoacetaldehyde (P-Ald) and alanine. In the second step, phosphonatase catalyzes the hydrolytic P-C bond cleavage of P-Ald to form orthophosphate and acetaldehyde. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319785 [Multi-domain]  Cd Length: 242  Bit Score: 334.27  E-value: 1.20e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   8 IQAVVFDWAGTTVDFGSRAPILAFMALFKDNKVEITVEEARAPMGLEKRDHIAAVLKMPRVAAAWQEVYGQAATEADIDR 87
Cdd:cd02586    1 IEAVIFDWAGTTVDYGSFAPVNAFVEAFAQRGVQITLEEARKPMGLLKIDHIRALLEMPRVAEAWRAVFGRLPTEADVDA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671  88 LYKDFIPYQLNSIPKCSALIPGALATFENIKKRGAKIGSNTGYASMMIGRLVKDAADQGYRPDCIVTASDVKYGRPYPEM 167
Cdd:cd02586   81 LYEEFEPILIASLAEYSSPIPGVLEVIAKLRARGIKIGSTTGYTREMMDIVLPEAAAQGYRPDSLVTPDDVPAGRPYPWM 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671 168 LWKNLIQLDVSDIKTVVKVDDTVVGIDEGLNAGCWTVGLAISGNEVGLSYEEWSALSADEQIVLKDKAYQKMNASGAHYV 247
Cdd:cd02586  161 CYKNAIELGVYDVAAVVKVGDTVPDIKEGLNAGMWTVGVILSGNELGLSEEEVEALDSEELAARRAEVRQRFKAAGAHYV 240

                 ..
gi 446132671 248 ID 249
Cdd:cd02586  241 ID 242
YcjU COG0637
Beta-phosphoglucomutase, HAD superfamily [Carbohydrate transport and metabolism];
7-254 6.91e-27

Beta-phosphoglucomutase, HAD superfamily [Carbohydrate transport and metabolism];


Pssm-ID: 440402 [Multi-domain]  Cd Length: 208  Bit Score: 103.75  E-value: 6.91e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   7 QIQAVVFDWAGTTVDFgSRAPILAFMALFKDNKVEITVEEARAPMGLEKRDHIAAVLKMPRVAAAWQEVYgqaateADID 86
Cdd:COG0637    1 MIKAVIFDMDGTLVDS-EPLHARAWREAFAELGIDLTEEEYRRLMGRSREDILRYLLEEYGLDLPEEELA------ARKE 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671  87 RLYKDFipYQLNSIPkcsaLIPGALATFENIKKRGAKIGSNTGYASMMIGRLVKDAADQGYrPDCIVTASDVKYGRPYPE 166
Cdd:COG0637   74 ELYREL--LAEEGLP----LIPGVVELLEALKEAGIKIAVATSSPRENAEAVLEAAGLLDY-FDVIVTGDDVARGKPDPD 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671 167 MLWKNLIQLDVS--------DIktvvkvddtVVGIDEGLNAGCWTVGLAisgnevglsyeewSALSADEQIvlkdkayqk 238
Cdd:COG0637  147 IYLLAAERLGVDpeecvvfeDS---------PAGIRAAKAAGMRVVGVP-------------DGGTAEEEL--------- 195
                        250
                 ....*....|....*.
gi 446132671 239 mnaSGAHYVIDSVADL 254
Cdd:COG0637  196 ---AGADLVVDDLAEL 208
Gph COG0546
Phosphoglycolate phosphatase, HAD superfamily [Energy production and conversion];
8-259 1.50e-16

Phosphoglycolate phosphatase, HAD superfamily [Energy production and conversion];


Pssm-ID: 440312 [Multi-domain]  Cd Length: 214  Bit Score: 76.12  E-value: 1.50e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   8 IQAVVFDWAGTTVDfgSRAPIL-AFMALFKDNKVE-ITVEEARAPMGLEKRDHIAAVLkmprvaaawqevygQAATEADI 85
Cdd:COG0546    1 IKLVLFDLDGTLVD--SAPDIAaALNEALAELGLPpLDLEELRALIGLGLRELLRRLL--------------GEDPDEEL 64
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671  86 DRLYKDFIPYQLNSIPKCSALIPGALATFENIKKRGAKIGSNTGYASMMIGRLVKdAADQGYRPDCIVTASDVKYGRPYP 165
Cdd:COG0546   65 EELLARFRELYEEELLDETRLFPGVRELLEALKARGIKLAVVTNKPREFAERLLE-ALGLDDYFDAIVGGDDVPPAKPKP 143
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671 166 EMLWKNLIQLDVS------------DIKTvvkvddtvvgideGLNAGCWTVGLAisgnevglsyeeWSALSADEqivlkd 233
Cdd:COG0546  144 EPLLEALERLGLDpeevlmvgdsphDIEA-------------ARAAGVPFIGVT------------WGYGSAEE------ 192
                        250       260
                 ....*....|....*....|....*.
gi 446132671 234 kayqkMNASGAHYVIDSVADLPNILD 259
Cdd:COG0546  193 -----LEAAGADYVIDSLAELLALLA 213
HAD-SF-IA-v3 TIGR01509
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; ...
10-206 2.57e-13

haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms: (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created with the knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly related HAD subfamilies caused by an overly broad single model. [Unknown function, Enzymes of unknown specificity]


Pssm-ID: 273662 [Multi-domain]  Cd Length: 178  Bit Score: 66.29  E-value: 2.57e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   10 AVVFDWAGTTVDFGSrapilafmalfkDNKVEITVEEaraPMGLEKRDHIAAVLKMPRVAAAWQEVYGQAATEADIDRLY 89
Cdd:TIGR01509   1 AILFDLDGVLVDTEF------------AIAKLINREE---LGLVPDELGVSAVGRLELALRRFKAQYGRTISPEDAQLLY 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   90 KDFIPYQLNSIPKcSALIPGALATFENIKKRGAKIGSNTGYASMMIgrLVKDAADQGYRPDCIVTASDVKYGRPYPEMLW 169
Cdd:TIGR01509  66 KQLFYEQIEEEAK-LKPLPGVRALLEALRARGKKLALLTNSPRAHK--LVLALLGLRDLFDVVIDSSDVGLGKPDPDIYL 142
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 446132671  170 KNLIQLDVS--------DiktvvkvddTVVGIDEGLNAGCWTVGL 206
Cdd:TIGR01509 143 QALKALGLEpsecvfvdD---------SPAGIEAAKAAGMHTVGV 178
HAD-SF-IA-v1 TIGR01549
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or ...
10-179 1.54e-09

haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms: (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model. [Unknown function, Enzymes of unknown specificity]


Pssm-ID: 273686 [Multi-domain]  Cd Length: 164  Bit Score: 55.48  E-value: 1.54e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   10 AVVFDWAGTTVDFgSRAPILAFMALFKDNKVEITVEEArapmglEKRDHIAAVLKMPRVA-AAWQEVYGQAATEADIDRL 88
Cdd:TIGR01549   1 AILFDIDGTLVDI-KFAIRRAFPQTFEEFGLDPASFKA------LKQAGGLAEEEWYRIAtSALEELQGRFWSEYDAEEA 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   89 YkdfipyqlnsipkcsalIPGALATFENIKKRGAKIG--SNTGYASMMIgrlvKDAADQGYRPDCIVTASDVKYGRPYPE 166
Cdd:TIGR01549  74 Y-----------------IRGAADLLARLKSAGIKLGiiSNGSLRAQKL----LLRLFGLGDYFELILVSDEPGSKPEPE 132
                         170
                  ....*....|...
gi 446132671  167 MLWKNLIQLDVSD 179
Cdd:TIGR01549 133 IFLAALESLGVPP 145
YigB COG1011
FMN and 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB, HAD superfamily ...
8-167 8.46e-06

FMN and 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB, HAD superfamily (riboflavin biosynthesis) [Coenzyme transport and metabolism];


Pssm-ID: 440635 [Multi-domain]  Cd Length: 220  Bit Score: 45.79  E-value: 8.46e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   8 IQAVVFDWAGTTVDFGSRApILAFMALFKDNKVEITVEEARAPMGLEKRDHIAAVlkmPRVAAAWQEVYGQAATEADID- 86
Cdd:COG1011    1 IKAVLFDLDGTLLDFDPVI-AEALRALAERLGLLDEAEELAEAYRAIEYALWRRY---ERGEITFAELLRRLLEELGLDl 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671  87 --RLYKDFipyqLNSIPKCSALIPGALATFENIKKRGAKIG--SNTGYASMmigRLVKDAADQGYRPDCIVTASDVKYGR 162
Cdd:COG1011   77 aeELAEAF----LAALPELVEPYPDALELLEALKARGYRLAllTNGSAELQ---EAKLRRLGLDDLFDAVVSSEEVGVRK 149

                 ....*
gi 446132671 163 PYPEM 167
Cdd:COG1011  150 PDPEI 154
Hydrolase pfam00702
haloacid dehalogenase-like hydrolase; This family is structurally different from the alpha ...
8-168 8.47e-06

haloacid dehalogenase-like hydrolase; This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Swiss:P24069. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteriztic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria.


Pssm-ID: 459910 [Multi-domain]  Cd Length: 191  Bit Score: 45.27  E-value: 8.47e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671    8 IQAVVFDWAGTTVDF-----------GSRAPI-LAFMALFKDnkVEITVEEARAPMGLEKRDHIAAvLKMPRVAAAWQEV 75
Cdd:pfam00702   1 IKAVVFDLDGTLTDGepvvteaiaelASEHPLaKAIVAAAED--LPIPVEDFTARLLLGKRDWLEE-LDILRGLVETLEA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   76 YGQAATEADIDRLYKDFIPYQLnsipkcsalIPGALATFENIKKRGAKIGSNTGYASMMIGRLVKdAADQGYRPDCIVTA 155
Cdd:pfam00702  78 EGLTVVLVELLGVIALADELKL---------YPGAAEALKALKERGIKVAILTGDNPEAAEALLR-LLGLDDYFDVVISG 147
                         170
                  ....*....|...
gi 446132671  156 SDVKYGRPYPEML 168
Cdd:pfam00702 148 DDVGVGKPKPEIY 160
HAD_PGPase cd07512
haloacid dehalogenase-like superfamily phosphoglycolate phosphatase, similar to Rhodobacter ...
10-125 8.82e-06

haloacid dehalogenase-like superfamily phosphoglycolate phosphatase, similar to Rhodobacter sphaeroides CbbZ; Phosphoglycolate phosphatase catalyzes the dephosphorylation of phosphoglycolate; its activity requires divalent cations, especially Mg++. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319815 [Multi-domain]  Cd Length: 214  Bit Score: 45.38  E-value: 8.82e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671  10 AVVFDWAGTTVDfgSRAPILAfmALfkdNKVeiTVEEARAPMGL-EKRDHI---AAVLkMPRVAAAwqevYGQAATEADI 85
Cdd:cd07512    1 AVIFDLDGTLID--SAPDLHA--AL---NAV--LAAEGLAPLSLaEVRSFVghgAPAL-IRRAFAA----AGEDLDGPLH 66
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 446132671  86 DRLYKDFIPYQLNSIPKCSALIPGALATFENIKKRGAKIG 125
Cdd:cd07512   67 DALLARFLDHYEADPPGLTRPYPGVIEALERLRAAGWRLA 106
HAD_like cd07533
uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily, similar ...
11-177 2.28e-05

uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily, similar to Parvibaculum lavamentivorans HAD-superfamily hydrolase, subfamily IA, variant 1; This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319835 [Multi-domain]  Cd Length: 207  Bit Score: 44.31  E-value: 2.28e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671  11 VVFDWAGTTVDfgSRAPILAFM-ALFKD-NKVEITVEEARAPMGLEKRDHIAAVLkmPRVAAAWQEVYGQAATEADIDRL 88
Cdd:cd07533    2 VIFDWDGTLAD--SQHNIVAAMtAAFADlGLPVPSAAEVRSIIGLSLDEAIARLL--PMATPALVAVAERYKEAFDILRL 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671  89 YKDfipyqlNSIPkcsaLIPGALATFENIKKRGAKIGSNTGYASMMIGRLVkDAADQGYRPDCIVTASDVKyGRPYPEML 168
Cdd:cd07533   78 LPE------HAEP----LFPGVREALDALAAQGVLLAVATGKSRRGLDRVL-EQHGLGGYFDATRTADDTP-SKPHPEML 145

                 ....*....
gi 446132671 169 WKNLIQLDV 177
Cdd:cd07533  146 REILAELGV 154
HAD_2 pfam13419
Haloacid dehalogenase-like hydrolase;
11-178 8.10e-05

Haloacid dehalogenase-like hydrolase;


Pssm-ID: 404323 [Multi-domain]  Cd Length: 178  Bit Score: 42.19  E-value: 8.10e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   11 VVFDWAGTTVDfGSRAPILAFMALFKDNKV-EITVEEARAPMGLEKRDHIAAVLKMPRVaaawqevygqaatEADIDRLY 89
Cdd:pfam13419   1 IIFDFDGTLLD-TEELIIKSFNYLLEEFGYgELSEEEILKFIGLPLREIFRYLGVSEDE-------------EEKIEFYL 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   90 KDFIPYQLNSIPKcsaLIPGALATFENIKKRGAKIG--SNTGYASMMIGrLVKDAADQGYrpDCIVTASDVKYGRPYPEM 167
Cdd:pfam13419  67 RKYNEELHDKLVK---PYPGIKELLEELKEQGYKLGivTSKSRENVEEF-LKQLGLEDYF--DVIVGGDDVEGKKPDPDP 140
                         170
                  ....*....|.
gi 446132671  168 LWKNLIQLDVS 178
Cdd:pfam13419 141 ILKALEQLGLK 151
PRK13222 PRK13222
N-acetylmuramic acid 6-phosphate phosphatase MupP;
5-259 6.82e-04

N-acetylmuramic acid 6-phosphate phosphatase MupP;


Pssm-ID: 237310 [Multi-domain]  Cd Length: 226  Bit Score: 39.79  E-value: 6.82e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   5 NTQIQAVVFDWAGTTVDfgsRAPILAF---MALfkdnkveitVEEARAPMGLEK-RDHI---AAVlkMPRVAAAWQevyG 77
Cdd:PRK13222   3 FMDIRAVAFDLDGTLVD---SAPDLAAavnAAL---------AALGLPPAGEERvRTWVgngADV--LVERALTWA---G 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671  78 QAATEADIDRLYKDFIPYQLNSIPKCSALIPGALATFENIKKRGAKIGSNTGYASMMIGRLVKDAADQGYRpDCIVTASD 157
Cdd:PRK13222  66 REPDEELLEKLRELFDRHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF-SVVIGGDS 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671 158 VKYGRPYPEMLWKNLIQLDV------------SDIKTvvkvddtvvgideGLNAGCWTVGLAIsgnevGLSYeewsalsa 225
Cdd:PRK13222 145 LPNKKPDPAPLLLACEKLGLdpeemlfvgdsrNDIQA-------------ARAAGCPSVGVTY-----GYNY-------- 198
                        250       260       270
                 ....*....|....*....|....*....|....
gi 446132671 226 DEQIvlkdkayqkmNASGAHYVIDSVADLPNILD 259
Cdd:PRK13222 199 GEPI----------ALSEPDVVIDHFAELLPLLG 222
HAD_BPGM-like cd07505
beta-phosphoglucomutase-like family of the haloacid dehalogenase-like (HAD) hydrolase ...
106-167 9.00e-04

beta-phosphoglucomutase-like family of the haloacid dehalogenase-like (HAD) hydrolase superfamily; This family represents the beta-phosphoglucomutase-like family of the haloacid dehalogenase-like (HAD) hydrolase superfamily. Family members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), Saccharomyces cerevisiae phosphatases GPP1 and GPP2 that dephosphorylate DL-glycerol-3-phosphate and DOG1 and DOG2 that dephosphorylate 2-deoxyglucose-6-phosphate, and Escherichia coli 6-phosphogluconate phosphatase YieH. It belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319808 [Multi-domain]  Cd Length: 143  Bit Score: 38.75  E-value: 9.00e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446132671 106 LIPGALATFENIKKRGAKIGSNTGYASMMIGRLVKDAADQGYRPDCIVTASDVKYGRPYPEM 167
Cdd:cd07505   42 LKPGVVELLDALKAAGIPVAVATSSSRRNVELLLLELGLLRGYFDVIVSGDDVERGKPAPDI 103
HAD_sEH-N_like cd02603
N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX ...
8-131 2.78e-03

N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive; This family includes the N-terminal phosphatase domain of human soluble epoxide hydrolase (sEH). sEH is a bifunctional enzyme with two distinct enzyme activities, the C-terminal domain has epoxide hydrolysis activity and the N-terminal domain (Ntermphos), which belongs to this family, has lipid phosphatase activity. The latter prefers mono-phosphate esters, and lysophosphatidic acids (LPAs) are the best natural substrates found to date. In addition this family includes Gallus gallus sEH and Xenopus sEH which appears to lack phosphatase activity, and Escherichia coli YihX/HAD4 which selectively hydrolyzes alpha-Glucose-1-P, phosphatase, has significant phosphatase activity against pyridoxal phosphate, and has low beta phosphoglucomutase activity. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319790 [Multi-domain]  Cd Length: 195  Bit Score: 38.09  E-value: 2.78e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   8 IQAVVFDWAGTTVDFGSRAPILAFmalFKDNKVEITVEEARAPMGLEKRDHIAAVLKMPRVAAAWQEVYGQAATEADIDR 87
Cdd:cd02603    1 IRAVLFDFGGVLIDPDPAAAVARF---EALTGEPSEFVLDTEGLAGAFLELERGRITEEEFWEELREELGRPLSAELFEE 77
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 446132671  88 LYKDFIPyqlnsipkcsaLIPGALATFENIKKRGAKIG--SNTGYA 131
Cdd:cd02603   78 LVLAAVD-----------PNPEMLDLLEALRAKGYKVYllSNTWPD 112
HAD_ScGPP-like cd07527
subfamily of beta-phosphoglucomutase-like family, similar to Saccharomyces cerevisiae ...
79-209 3.45e-03

subfamily of beta-phosphoglucomutase-like family, similar to Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p); This subfamily includes Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p). GPP1p and GPP2p are involved in glycerol biosynthesis, GPP1 is induced in response to both anaerobic and hyperosmotic stress, GPP2 is induced in response to hyperosmotic or oxidative stress, and during diauxic shift; overexpression of DOG1 or DOG2 confers 2-deoxyglucose resistance. These belong to the beta-phosphoglucomutase-like family whose other members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), and Escherichia coli 6-phosphogluconate phosphatase YieH. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319829 [Multi-domain]  Cd Length: 205  Bit Score: 37.71  E-value: 3.45e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671  79 AATEADIDRLYK--DFIPyqlNSIPKCSALIPGALATFENIKKRGAKIGSNTGYASMMIGRLVKDAAdqGYRPDCIVTAS 156
Cdd:cd07527   52 APDDADIELVLAleTEEP---ESYPEGVIAIPGAVDLLASLPAAGDRWAIVTSGTRALAEARLEAAG--LPHPEVLVTAD 126
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 446132671 157 DVKYGRPYPE--MLWKNLIQLDVSDIktvVKVDDTVVGIDEGLNAGCWTVGLAIS 209
Cdd:cd07527  127 DVKNGKPDPEpyLLGAKLLGLDPSDC---VVFEDAPAGIKAGKAAGARVVAVNTS 178
HAD_PPase cd02616
pyrophosphatase similar to Bacillus subtilis PpaX; This family includes Bacillus subtilis PpaX ...
8-178 4.77e-03

pyrophosphatase similar to Bacillus subtilis PpaX; This family includes Bacillus subtilis PpaX which hydrolyzes pyrophosphate formed during serine-46-phosphorylated HPr (P-Ser-HPr) dephosphorylation by the bifunctional enzyme HPr kinase/phosphorylase. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319797 [Multi-domain]  Cd Length: 207  Bit Score: 37.26  E-value: 4.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671   8 IQAVVFDWAGTTVDfGSRAPILAFMALFKD-NKVEITVEEARAPMGLEKRDHIAAVLKMpRVAAAWQEvygqaateadid 86
Cdd:cd02616    1 ITTILFDLDGTLID-TNELIIKSFNHTLKEyGLEGYTREEVLPFIGPPLRETFEKIDPD-KLEDMVEE------------ 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446132671  87 rlykdFIPYQLNSIPKCSALIPGALATFENIKKRGAKIGSNTGYASMMIGR-LVKDAADQGYrpDCIVTASDVKYGRPYP 165
Cdd:cd02616   67 -----FRKYYREHNDDLTKEYPGVYETLARLKSQGIKLGVVTTKLRETALKgLKLLGLDKYF--DVIVGGDDVTHHKPDP 139
                        170
                 ....*....|...
gi 446132671 166 EMLWKNLIQLDVS 178
Cdd:cd02616  140 EPVLKALELLGAE 152
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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