MULTISPECIES: helix-turn-helix domain-containing protein [Enterobacteriaceae]
List of domain hits
Name | Accession | Description | Interval | E-value | |||
PRK09706 super family | cl27794 | transcriptional repressor DicA; Reviewed |
30-137 | 3.64e-13 | |||
transcriptional repressor DicA; Reviewed The actual alignment was detected with superfamily member PRK09706: Pssm-ID: 182039 [Multi-domain] Cd Length: 135 Bit Score: 62.18 E-value: 3.64e-13
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Name | Accession | Description | Interval | E-value | |||
PRK09706 | PRK09706 | transcriptional repressor DicA; Reviewed |
30-137 | 3.64e-13 | |||
transcriptional repressor DicA; Reviewed Pssm-ID: 182039 [Multi-domain] Cd Length: 135 Bit Score: 62.18 E-value: 3.64e-13
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HipB | COG1396 | Transcriptional regulator, contains XRE-family HTH domain [Transcription]; |
5-81 | 5.86e-09 | |||
Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Pssm-ID: 441006 [Multi-domain] Cd Length: 83 Bit Score: 49.61 E-value: 5.86e-09
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HTH_XRE | cd00093 | Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the ... |
12-73 | 5.19e-07 | |||
Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators. Pssm-ID: 238045 [Multi-domain] Cd Length: 58 Bit Score: 44.08 E-value: 5.19e-07
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HTH_XRE | smart00530 | Helix-turn-helix XRE-family like proteins; |
14-73 | 1.36e-06 | |||
Helix-turn-helix XRE-family like proteins; Pssm-ID: 197775 [Multi-domain] Cd Length: 56 Bit Score: 42.89 E-value: 1.36e-06
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HTH_3 | pfam01381 | Helix-turn-helix; This large family of DNA binding helix-turn helix proteins includes Cro and ... |
30-73 | 1.44e-05 | |||
Helix-turn-helix; This large family of DNA binding helix-turn helix proteins includes Cro and CI. Within the protein Swiss:Q5F9C2, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be that of a DNA-binding regulator, the function of most other members, so is not necessarily characteriztic of the whole family. Pssm-ID: 460181 [Multi-domain] Cd Length: 55 Bit Score: 40.22 E-value: 1.44e-05
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Name | Accession | Description | Interval | E-value | |||
PRK09706 | PRK09706 | transcriptional repressor DicA; Reviewed |
30-137 | 3.64e-13 | |||
transcriptional repressor DicA; Reviewed Pssm-ID: 182039 [Multi-domain] Cd Length: 135 Bit Score: 62.18 E-value: 3.64e-13
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HipB | COG1396 | Transcriptional regulator, contains XRE-family HTH domain [Transcription]; |
5-81 | 5.86e-09 | |||
Transcriptional regulator, contains XRE-family HTH domain [Transcription]; Pssm-ID: 441006 [Multi-domain] Cd Length: 83 Bit Score: 49.61 E-value: 5.86e-09
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PRK13355 | PRK13355 | bifunctional HTH-domain containing protein/aminotransferase; Provisional |
11-111 | 9.33e-09 | |||
bifunctional HTH-domain containing protein/aminotransferase; Provisional Pssm-ID: 237361 [Multi-domain] Cd Length: 517 Bit Score: 52.43 E-value: 9.33e-09
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HTH_XRE | cd00093 | Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the ... |
12-73 | 5.19e-07 | |||
Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators. Pssm-ID: 238045 [Multi-domain] Cd Length: 58 Bit Score: 44.08 E-value: 5.19e-07
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HTH_XRE | smart00530 | Helix-turn-helix XRE-family like proteins; |
14-73 | 1.36e-06 | |||
Helix-turn-helix XRE-family like proteins; Pssm-ID: 197775 [Multi-domain] Cd Length: 56 Bit Score: 42.89 E-value: 1.36e-06
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HTH_3 | pfam01381 | Helix-turn-helix; This large family of DNA binding helix-turn helix proteins includes Cro and ... |
30-73 | 1.44e-05 | |||
Helix-turn-helix; This large family of DNA binding helix-turn helix proteins includes Cro and CI. Within the protein Swiss:Q5F9C2, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be that of a DNA-binding regulator, the function of most other members, so is not necessarily characteriztic of the whole family. Pssm-ID: 460181 [Multi-domain] Cd Length: 55 Bit Score: 40.22 E-value: 1.44e-05
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XRE | COG1476 | DNA-binding transcriptional regulator, XRE-family HTH domain [Transcription]; |
8-77 | 5.07e-05 | |||
DNA-binding transcriptional regulator, XRE-family HTH domain [Transcription]; Pssm-ID: 441085 [Multi-domain] Cd Length: 68 Bit Score: 39.06 E-value: 5.07e-05
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aMBF1 | COG1813 | Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and ... |
10-72 | 2.01e-04 | |||
Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains [Translation, ribosomal structure and biogenesis]; Pssm-ID: 441418 [Multi-domain] Cd Length: 70 Bit Score: 37.61 E-value: 2.01e-04
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Blast search parameters | ||||
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