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Conserved domains on  [gi|446158737|ref|WP_000236592|]
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MULTISPECIES: DoxX family protein [Bacillus]

Protein Classification

DoxX family protein( domain architecture ID 10006227)

DoxX family protein, an inner membrane protein, similar to Bacillus subtilis putative oxidoreductases MhqP and CatD, and Escherichia coli inner membrane proteins YphA and YqjF

Gene Ontology:  GO:0005886
PubMed:  15306018|26067605

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DoxX COG2259
Uncharacterized membrane protein YphA, DoxX/SURF4 family [Function unknown];
7-147 5.82e-06

Uncharacterized membrane protein YphA, DoxX/SURF4 family [Function unknown];


:

Pssm-ID: 441860  Cd Length: 134  Bit Score: 43.66  E-value: 5.82e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446158737   7 RENKAVSFALAVIRVYLGYTWLMAGIGKLQgkGFDATgylqgaiekskgaqpavqswwASFLQEFAIPNVDLFNTLVTWG 86
Cdd:COG2259    2 LLSTLADLGLLLLRLLLGLLFLAHGLQKLF--GFDGT---------------------AGFFASLGLPLPALLAYLAGLA 58
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446158737  87 EILVGIGLIVGCLTKTA--------VFFGLVMNFSYMFSGSIGVNPEMVILSMFVLVSGMNAGKFGMDG 147
Cdd:COG2259   59 ELVGGLLLILGLFTRLAalllagfmLVAIFVVHLPNGFWAMGGGEKNLLLAGGLLALALLGPGRYSLDA 127
 
Name Accession Description Interval E-value
DoxX COG2259
Uncharacterized membrane protein YphA, DoxX/SURF4 family [Function unknown];
7-147 5.82e-06

Uncharacterized membrane protein YphA, DoxX/SURF4 family [Function unknown];


Pssm-ID: 441860  Cd Length: 134  Bit Score: 43.66  E-value: 5.82e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446158737   7 RENKAVSFALAVIRVYLGYTWLMAGIGKLQgkGFDATgylqgaiekskgaqpavqswwASFLQEFAIPNVDLFNTLVTWG 86
Cdd:COG2259    2 LLSTLADLGLLLLRLLLGLLFLAHGLQKLF--GFDGT---------------------AGFFASLGLPLPALLAYLAGLA 58
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446158737  87 EILVGIGLIVGCLTKTA--------VFFGLVMNFSYMFSGSIGVNPEMVILSMFVLVSGMNAGKFGMDG 147
Cdd:COG2259   59 ELVGGLLLILGLFTRLAalllagfmLVAIFVVHLPNGFWAMGGGEKNLLLAGGLLALALLGPGRYSLDA 127
DoxX pfam07681
DoxX; These proteins appear to have some sequence similarity with pfam04173 but their function ...
15-112 8.05e-04

DoxX; These proteins appear to have some sequence similarity with pfam04173 but their function is unknown.


Pssm-ID: 429591  Cd Length: 84  Bit Score: 36.77  E-value: 8.05e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446158737   15 ALAVIRVYLGYTWLMAGIGKLQGkGFDATgylqgaiekskgaqpavqswwASFLQEFAIPNVDLFNTLVTWGEILVGIGL 94
Cdd:pfam07681   1 GLLLLRLALGVLFIAHGLQKLFG-GFAGT---------------------AGYFASLGLPPPALLAYLAILAELVGGLLL 58
                          90
                  ....*....|....*...
gi 446158737   95 IVGCLTKTAVFFGLVMNF 112
Cdd:pfam07681  59 LLGLLTRLAALLLAVFML 76
 
Name Accession Description Interval E-value
DoxX COG2259
Uncharacterized membrane protein YphA, DoxX/SURF4 family [Function unknown];
7-147 5.82e-06

Uncharacterized membrane protein YphA, DoxX/SURF4 family [Function unknown];


Pssm-ID: 441860  Cd Length: 134  Bit Score: 43.66  E-value: 5.82e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446158737   7 RENKAVSFALAVIRVYLGYTWLMAGIGKLQgkGFDATgylqgaiekskgaqpavqswwASFLQEFAIPNVDLFNTLVTWG 86
Cdd:COG2259    2 LLSTLADLGLLLLRLLLGLLFLAHGLQKLF--GFDGT---------------------AGFFASLGLPLPALLAYLAGLA 58
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446158737  87 EILVGIGLIVGCLTKTA--------VFFGLVMNFSYMFSGSIGVNPEMVILSMFVLVSGMNAGKFGMDG 147
Cdd:COG2259   59 ELVGGLLLILGLFTRLAalllagfmLVAIFVVHLPNGFWAMGGGEKNLLLAGGLLALALLGPGRYSLDA 127
DoxX pfam07681
DoxX; These proteins appear to have some sequence similarity with pfam04173 but their function ...
15-112 8.05e-04

DoxX; These proteins appear to have some sequence similarity with pfam04173 but their function is unknown.


Pssm-ID: 429591  Cd Length: 84  Bit Score: 36.77  E-value: 8.05e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446158737   15 ALAVIRVYLGYTWLMAGIGKLQGkGFDATgylqgaiekskgaqpavqswwASFLQEFAIPNVDLFNTLVTWGEILVGIGL 94
Cdd:pfam07681   1 GLLLLRLALGVLFIAHGLQKLFG-GFAGT---------------------AGYFASLGLPPPALLAYLAILAELVGGLLL 58
                          90
                  ....*....|....*...
gi 446158737   95 IVGCLTKTAVFFGLVMNF 112
Cdd:pfam07681  59 LLGLLTRLAALLLAVFML 76
DoxD pfam04173
TQO small subunit DoxD; Swiss:P97207 is a subunit of the terminal quinol oxidase present in ...
19-153 2.86e-03

TQO small subunit DoxD; Swiss:P97207 is a subunit of the terminal quinol oxidase present in the plasma membrane of Acidianus ambivalens, with calculated molecular mass of 20.4 kDa. Thiosulphate:quinone oxidoreductase (TQO) is one of the early steps in elemental sulphur oxidation. A novel TQO enzyme was purified from the thermo-acidophilic archaeon Acidianus ambivalens and shown to consist of a large subunit (DoxD) and a smaller subunit (DoxA). The DoxD- and DoxA-like two subunits are fused together in a single polypeptide in Swiss:Q8AAF0.


Pssm-ID: 282080  Cd Length: 167  Bit Score: 36.26  E-value: 2.86e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446158737   19 IRVYLGYTWLMAGI-GKLQGKGF---DATGYLQGAIEKSKGAQPAVQSwwasFLQEFAIPNVDLFNTLV--TWGEILVGI 92
Cdd:pfam04173   5 LRLAVGWMFFYAGIrRALLNPAKldpNSTSYVGGKLINFLPHASPIKP----FLEYVLLNHSLLVGFLVmfGYVEIIFGL 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446158737   93 GLIVGCLTKTAVFFGLVMNFSYMFSGS---------IGVNPEMVILSMFVLVSGmnAGKFGMDGFVIPKV 153
Cdd:pfam04173  81 LYIIGLLTRLSSLVAFYMALGYFLSAYwlgstcedeWQIGLLMMAIAFYLILTG--SGRFSLDYLLLKKL 148
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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