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Conserved domains on  [gi|446190446|ref|WP_000268301|]
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MULTISPECIES: baseplate assembly protein [Enterobacteriaceae]

Protein Classification

baseplate assembly protein( domain architecture ID 10010069)

baseplate assembly protein similar to Escherichia virus P2 baseplate protein J (GpJ) that is expressed in the late phase of the viral replicative cycle and may be part of the wedges of the baseplate

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
J PHA02568
baseplate assembly protein; Provisional
1-300 7.44e-169

baseplate assembly protein; Provisional


:

Pssm-ID: 164963  Cd Length: 300  Bit Score: 469.98  E-value: 7.44e-169
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446   1 MAVIDLSQLPAPQIVDVPDFETLLAERKAEFVALHPKDEQEAVIRTLELESEPVTKLLQENAYRELLLRQRINEAAQAVM 80
Cdd:PHA02568   1 MAIIDLSQLPAPDIVEVLDFETLLAERKAALISLYPEDQQAAIAATLALESEPLTKLLQENAYRELLLRQRVNEAARAVM 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446  81 VAYAMGSDLDQLAANYNVKRLTVTPADNDAVPPVAAVMESDEALRLRVPAAFEGLSVAGPTAAYEFHARSADGRVADASA 160
Cdd:PHA02568  81 LAYAEGSDLDAIAANFNVERLVVTPADPNAFPPVPAVMEDDDSLRERIQLAPEGLSVAGPRLAYQFHARSADGRVADASA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446 161 TSPAPAEVVLTVLSREGDGTAEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASL 240
Cdd:PHA02568 161 TSPAPAEVVVTVLSREGNGTASEDLLAAVRAALNREDVRPVTDRVTVQSATIVPYQIRATLYLYPGPDSEVILAAAEARL 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446 241 QKYIASQTRLGRDIRRSAIFAALHVEGVQRVELASPLADVVLNKTQAASCTQWSVTNGGT 300
Cdd:PHA02568 241 QAYANDQHRLGRDITRSAIYAALHVAGVQKVELLSPAADLVLTLTQAPYCTGIELTVGGV 300
 
Name Accession Description Interval E-value
J PHA02568
baseplate assembly protein; Provisional
1-300 7.44e-169

baseplate assembly protein; Provisional


Pssm-ID: 164963  Cd Length: 300  Bit Score: 469.98  E-value: 7.44e-169
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446   1 MAVIDLSQLPAPQIVDVPDFETLLAERKAEFVALHPKDEQEAVIRTLELESEPVTKLLQENAYRELLLRQRINEAAQAVM 80
Cdd:PHA02568   1 MAIIDLSQLPAPDIVEVLDFETLLAERKAALISLYPEDQQAAIAATLALESEPLTKLLQENAYRELLLRQRVNEAARAVM 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446  81 VAYAMGSDLDQLAANYNVKRLTVTPADNDAVPPVAAVMESDEALRLRVPAAFEGLSVAGPTAAYEFHARSADGRVADASA 160
Cdd:PHA02568  81 LAYAEGSDLDAIAANFNVERLVVTPADPNAFPPVPAVMEDDDSLRERIQLAPEGLSVAGPRLAYQFHARSADGRVADASA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446 161 TSPAPAEVVLTVLSREGDGTAEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASL 240
Cdd:PHA02568 161 TSPAPAEVVVTVLSREGNGTASEDLLAAVRAALNREDVRPVTDRVTVQSATIVPYQIRATLYLYPGPDSEVILAAAEARL 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446 241 QKYIASQTRLGRDIRRSAIFAALHVEGVQRVELASPLADVVLNKTQAASCTQWSVTNGGT 300
Cdd:PHA02568 241 QAYANDQHRLGRDITRSAIYAALHVAGVQKVELLSPAADLVLTLTQAPYCTGIELTVGGV 300
COG3948 COG3948
Phage-related baseplate assembly protein [Mobilome: prophages, transposons];
2-302 6.70e-161

Phage-related baseplate assembly protein [Mobilome: prophages, transposons];


Pssm-ID: 443148 [Multi-domain]  Cd Length: 296  Bit Score: 449.67  E-value: 6.70e-161
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446   2 AVIDLSQLPAPQIVDVPDFETLLAERKAEFVALHPkdeqeAVIRTLELESEPVTKLLQENAYRELLLRQRINEAAQAVMV 81
Cdd:COG3948    1 ATIDLSQLPAPDVVETLDFETILAERKADLEALYP-----EVTGTTLLESDPLRKLLEVNAYRELLLRQRINEAAKANLL 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446  82 AYAMGSDLDQLAANYNVKRLTVTPADNDAVPPVAAVMESDEALRLRVPAAFEGLSVAGPTAAYEFHARSADGRVADASAT 161
Cdd:COG3948   76 AYATGADLDHLGALFGVERLVIQPADTTARPPVAAVMESDDDLRERIQLAPEGFSVAGPEGAYEFHALSADGRIADVSVI 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446 162 SPAPAEVVLTVLSREGDGTAEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASLQ 241
Cdd:COG3948  156 SPAPGEVTVYVLSREGDGTPSAELLAAVLAALSAEDVRPLTDRVTVQAATIVDYQIDATLYLYPGPDAEAVLAAARAALE 235
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446190446 242 KYIASQTRLGRDIRRSAIFAALHVEGVQRVELASPLADVVLNKTQAASCTQWSVTNGGTDE 302
Cdd:COG3948  236 AYVAQQHRLGRDIVPSAIYAALHVAGVQRVELTSPAADVVLDDTQAAYCTGITVTVGGVDD 296
Baseplate_J pfam04865
Baseplate J-like protein; The P2 bacteriophage J protein lies at the edge of the baseplate. ...
119-262 6.77e-21

Baseplate J-like protein; The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.


Pssm-ID: 428162 [Multi-domain]  Cd Length: 254  Bit Score: 89.29  E-value: 6.77e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446  119 ESDEALRLRVPAAFEGLSVAGPTAAYEFHARSADGrVADASATSP--APAEVVLTVLSREGDgTAEKDLLDVVEKALnSE 196
Cdd:pfam04865 112 ESDEALRERILEAPQSPPTGGNKADYKEWALEVPG-VGRAKVFPLwnGPGTVKVYILDDNGE-LPTPELLAAVQAYI-SE 188
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446190446  197 NVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASLQKYIASQTRLGRDIRRSAIFAA 262
Cdd:pfam04865 189 GVRPVGAEVTVLAPVPKAVNITATLLLAPGYTLAAVKQAVEAAIQAYFKELAFPGGTIVPSQIRAA 254
 
Name Accession Description Interval E-value
J PHA02568
baseplate assembly protein; Provisional
1-300 7.44e-169

baseplate assembly protein; Provisional


Pssm-ID: 164963  Cd Length: 300  Bit Score: 469.98  E-value: 7.44e-169
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446   1 MAVIDLSQLPAPQIVDVPDFETLLAERKAEFVALHPKDEQEAVIRTLELESEPVTKLLQENAYRELLLRQRINEAAQAVM 80
Cdd:PHA02568   1 MAIIDLSQLPAPDIVEVLDFETLLAERKAALISLYPEDQQAAIAATLALESEPLTKLLQENAYRELLLRQRVNEAARAVM 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446  81 VAYAMGSDLDQLAANYNVKRLTVTPADNDAVPPVAAVMESDEALRLRVPAAFEGLSVAGPTAAYEFHARSADGRVADASA 160
Cdd:PHA02568  81 LAYAEGSDLDAIAANFNVERLVVTPADPNAFPPVPAVMEDDDSLRERIQLAPEGLSVAGPRLAYQFHARSADGRVADASA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446 161 TSPAPAEVVLTVLSREGDGTAEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASL 240
Cdd:PHA02568 161 TSPAPAEVVVTVLSREGNGTASEDLLAAVRAALNREDVRPVTDRVTVQSATIVPYQIRATLYLYPGPDSEVILAAAEARL 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446 241 QKYIASQTRLGRDIRRSAIFAALHVEGVQRVELASPLADVVLNKTQAASCTQWSVTNGGT 300
Cdd:PHA02568 241 QAYANDQHRLGRDITRSAIYAALHVAGVQKVELLSPAADLVLTLTQAPYCTGIELTVGGV 300
COG3948 COG3948
Phage-related baseplate assembly protein [Mobilome: prophages, transposons];
2-302 6.70e-161

Phage-related baseplate assembly protein [Mobilome: prophages, transposons];


Pssm-ID: 443148 [Multi-domain]  Cd Length: 296  Bit Score: 449.67  E-value: 6.70e-161
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446   2 AVIDLSQLPAPQIVDVPDFETLLAERKAEFVALHPkdeqeAVIRTLELESEPVTKLLQENAYRELLLRQRINEAAQAVMV 81
Cdd:COG3948    1 ATIDLSQLPAPDVVETLDFETILAERKADLEALYP-----EVTGTTLLESDPLRKLLEVNAYRELLLRQRINEAAKANLL 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446  82 AYAMGSDLDQLAANYNVKRLTVTPADNDAVPPVAAVMESDEALRLRVPAAFEGLSVAGPTAAYEFHARSADGRVADASAT 161
Cdd:COG3948   76 AYATGADLDHLGALFGVERLVIQPADTTARPPVAAVMESDDDLRERIQLAPEGFSVAGPEGAYEFHALSADGRIADVSVI 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446 162 SPAPAEVVLTVLSREGDGTAEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASLQ 241
Cdd:COG3948  156 SPAPGEVTVYVLSREGDGTPSAELLAAVLAALSAEDVRPLTDRVTVQAATIVDYQIDATLYLYPGPDAEAVLAAARAALE 235
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446190446 242 KYIASQTRLGRDIRRSAIFAALHVEGVQRVELASPLADVVLNKTQAASCTQWSVTNGGTDE 302
Cdd:COG3948  236 AYVAQQHRLGRDIVPSAIYAALHVAGVQRVELTSPAADVVLDDTQAAYCTGITVTVGGVDD 296
Baseplate_J pfam04865
Baseplate J-like protein; The P2 bacteriophage J protein lies at the edge of the baseplate. ...
119-262 6.77e-21

Baseplate J-like protein; The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.


Pssm-ID: 428162 [Multi-domain]  Cd Length: 254  Bit Score: 89.29  E-value: 6.77e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446  119 ESDEALRLRVPAAFEGLSVAGPTAAYEFHARSADGrVADASATSP--APAEVVLTVLSREGDgTAEKDLLDVVEKALnSE 196
Cdd:pfam04865 112 ESDEALRERILEAPQSPPTGGNKADYKEWALEVPG-VGRAKVFPLwnGPGTVKVYILDDNGE-LPTPELLAAVQAYI-SE 188
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446190446  197 NVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASLQKYIASQTRLGRDIRRSAIFAA 262
Cdd:pfam04865 189 GVRPVGAEVTVLAPVPKAVNITATLLLAPGYTLAAVKQAVEAAIQAYFKELAFPGGTIVPSQIRAA 254
JayE COG3299
Uncharacterized phage protein gp47/JayE [Mobilome: prophages, transposons];
119-296 1.29e-12

Uncharacterized phage protein gp47/JayE [Mobilome: prophages, transposons];


Pssm-ID: 442528 [Multi-domain]  Cd Length: 340  Bit Score: 67.27  E-value: 1.29e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446 119 ESDEALRLRVPAAFEGLSVAGPTAAYEFHARSADGrVADASATSpapaevvltvlSREGDGTA-----EKDLLDVVEKAL 193
Cdd:COG3299  170 ETDEELRARLLASVRRPPTGGNAADYRAWALEVPG-VGRAKVYP-----------LWNGPGTVkvvivDGGDDAAVQAYI 237
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446190446 194 nsENVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASLQKYIASqTRLGRDIRRSAIFAALH-VEGVQRVE 272
Cdd:COG3299  238 --DPKRPIGADVTVVAPTEVPINVTVTLTPDSGYTLAAVRAAIKAALAAYFNR-LPIGETVSLSRIEAAILsIPGVTDLT 314
                        170       180
                 ....*....|....*....|....
gi 446190446 273 LASPLADVVLNKTQAASCTQWSVT 296
Cdd:COG3299  315 INGPTANITIGENEIPVLGTVTVT 338
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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