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Conserved domains on  [gi|446207356|ref|WP_000285211|]
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MULTISPECIES: C45 family peptidase [Bacillus]

Protein Classification

C45 family peptidase( domain architecture ID 1905477)

C45 family peptidase similar to Penicillium chrysogenum isopenicillin-N N-acyltransferase that catalyzes the exchange of the alpha-aminoadipyl side chain of isopenicillin N for phenylacetic acid to yield penicillin

CATH:  3.60.60.10
EC:  2.3.1.-
Gene Ontology:  GO:0016747
MEROPS:  C45
PubMed:  20223213

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
C45_proenzyme super family cl45860
C45 family autoproteolytic acyltransferase/hydolase; Members of this family include hydrolases ...
12-324 1.41e-80

C45 family autoproteolytic acyltransferase/hydolase; Members of this family include hydrolases and N-acyltransferases, and belong to the Ntn (N-terminal nucleophile) hydrolase family. Members have an invariant Cys residue (Cys-103 in XP_002569112.1) required both for autoproteolytic processing into alpha and beta chains and for activity. The family is described by MEROPs as a cysteine protease, family C45, because of its autoproteolytic activity. Characterized members include TAN from Drosophila, which removes beta-alanine from both carcinine and N-beta-alanyl dopamine, and isopenicillin-N N-acyltransferase from various fungi. The latter has been heavily studied because of its role in penicillin biosynthesis.


The actual alignment was detected with superfamily member NF040521:

Pssm-ID: 468523 [Multi-domain]  Cd Length: 312  Bit Score: 249.13  E-value: 1.41e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356  12 KGSHYEIGKQQGEFVKQHPY-----LIPQFIQKENLISHQHWTESRNILHNYCPGINEEIEGFCEVLKIPSENMMY---- 82
Cdd:NF040521   1 SGSPYEIGRQLGELLKELIRdlylaLLRAWGLVSWRELRDFAKEFLAALEAFAPELWEELEGIADGLGLPFEDVLAlnar 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356  83 YYQTLLKAGCSHCAVLPKKtdlKHTYVLRNYDLSPVIDDMRFCSTHVEG---AYAHSGFSTQYFGRTEGVNEHGLSVTFS 159
Cdd:NF040521  81 TEILAAPDGCSTFAVLGED---GEPILARNYDWHPELYDGCLLLTIRPDggpRYASIGYAGLLPGRTDGMNEAGLAVTLN 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356 160 acgqpvgNIAGLRKPAVsGLQCFAVIRVLLEKCKNVQEAKSLIEEIPIASNMNLIVADPV-DAVCIEIFDGYKSIITIVE 238
Cdd:NF040521 158 -------FLDGRKLPGV-GVPVHLLARAILENCKTVDEAIALLKEIPRASSFNLTLADASgRAASVEASPDRVVVVRPED 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356 239 esqDFIVSTNHAISLPIQKLNSRRLEQSTNRYHTLYEHLnrNEQVSIESLKGLVQKEYPAGLTVHNYEEW--FGTLHSVL 316
Cdd:NF040521 230 ---GLLVHTNHFLSPELEEENRIATPSSRERYERLEELL--KGKLDAEDAKALLSDGYPLPICRHPYPDGdrFGTLATVV 304

                 ....*...
gi 446207356 317 FDLHECTM 324
Cdd:NF040521 305 FDPAAGTL 312
 
Name Accession Description Interval E-value
C45_proenzyme NF040521
C45 family autoproteolytic acyltransferase/hydolase; Members of this family include hydrolases ...
12-324 1.41e-80

C45 family autoproteolytic acyltransferase/hydolase; Members of this family include hydrolases and N-acyltransferases, and belong to the Ntn (N-terminal nucleophile) hydrolase family. Members have an invariant Cys residue (Cys-103 in XP_002569112.1) required both for autoproteolytic processing into alpha and beta chains and for activity. The family is described by MEROPs as a cysteine protease, family C45, because of its autoproteolytic activity. Characterized members include TAN from Drosophila, which removes beta-alanine from both carcinine and N-beta-alanyl dopamine, and isopenicillin-N N-acyltransferase from various fungi. The latter has been heavily studied because of its role in penicillin biosynthesis.


Pssm-ID: 468523 [Multi-domain]  Cd Length: 312  Bit Score: 249.13  E-value: 1.41e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356  12 KGSHYEIGKQQGEFVKQHPY-----LIPQFIQKENLISHQHWTESRNILHNYCPGINEEIEGFCEVLKIPSENMMY---- 82
Cdd:NF040521   1 SGSPYEIGRQLGELLKELIRdlylaLLRAWGLVSWRELRDFAKEFLAALEAFAPELWEELEGIADGLGLPFEDVLAlnar 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356  83 YYQTLLKAGCSHCAVLPKKtdlKHTYVLRNYDLSPVIDDMRFCSTHVEG---AYAHSGFSTQYFGRTEGVNEHGLSVTFS 159
Cdd:NF040521  81 TEILAAPDGCSTFAVLGED---GEPILARNYDWHPELYDGCLLLTIRPDggpRYASIGYAGLLPGRTDGMNEAGLAVTLN 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356 160 acgqpvgNIAGLRKPAVsGLQCFAVIRVLLEKCKNVQEAKSLIEEIPIASNMNLIVADPV-DAVCIEIFDGYKSIITIVE 238
Cdd:NF040521 158 -------FLDGRKLPGV-GVPVHLLARAILENCKTVDEAIALLKEIPRASSFNLTLADASgRAASVEASPDRVVVVRPED 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356 239 esqDFIVSTNHAISLPIQKLNSRRLEQSTNRYHTLYEHLnrNEQVSIESLKGLVQKEYPAGLTVHNYEEW--FGTLHSVL 316
Cdd:NF040521 230 ---GLLVHTNHFLSPELEEENRIATPSSRERYERLEELL--KGKLDAEDAKALLSDGYPLPICRHPYPDGdrFGTLATVV 304

                 ....*...
gi 446207356 317 FDLHECTM 324
Cdd:NF040521 305 FDPAAGTL 312
COG4927 COG4927
Predicted choloylglycine hydrolase [General function prediction only];
1-261 1.25e-61

Predicted choloylglycine hydrolase [General function prediction only];


Pssm-ID: 443955 [Multi-domain]  Cd Length: 242  Bit Score: 197.87  E-value: 1.25e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356   1 MYQVkgYFSSLKGSHYEIGKQQGEFVKQHPylipQFIQKENLISHQHWTESRNILHNYCPGINEEIEGFCEVLKIPSENM 80
Cdd:COG4927    1 MKKM--RFLRLRGSHYEIGLQLGKLLKELI----IAYLPRGKEKRPFLAEARAALRRYMPELWEELEGLADGLDVPLEEL 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356  81 MYYYQT--LLKAGCSHCAVLPKKtdlkHTYVLRNYDLSPVIDDMRFCST-HVEGAYAHSGFSTQYFGRTEGVNEHGLSVT 157
Cdd:COG4927   75 LLLNGGyyLPLSGCSQFAVAPEG----EPLLARNYDFHPDLYEGRLLLTvQPDGGYAFIGVTDGLIGRLDGMNEKGLAVG 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356 158 FSACGqpvgniaglRKPAVSGLQCFAVIRVLLEKCKNVQEAKSLIEEIPIASNMNLIVADPVD-AVCIEIFDGYKSIIti 236
Cdd:COG4927  151 LNFVG---------RKVAGPGFPIPLLIRYILETCSTVDEAIALLKEIPHASSYNLTLADASGnAAVVEVSPRGVEVR-- 219
                        250       260
                 ....*....|....*....|....*
gi 446207356 237 veESQDFIVSTNHAISLPIQKLNSR 261
Cdd:COG4927  220 --EPNGFLVCTNHFQSLEMAEENRN 242
AAT pfam03417
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase;
107-331 3.68e-56

Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase;


Pssm-ID: 397472  Cd Length: 223  Bit Score: 183.30  E-value: 3.68e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356  107 TYVLRNYDLSPVIDDMRFCSTHVE-GAYAHSGFSTQYFGRTEGVNEHGLSVTFsacgqpvgNIAGLRKPAVSGLQCFAVI 185
Cdd:pfam03417   7 RLLGRNEDYDPETYSHRYLLTAPEdPGFATIGYAGRLPGRTDGINEKGLAMGI--------NFVHLRKLRGDGFPRHFIT 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356  186 RVLLEKCKNVQEAKSLIEEIPIASNMNLIVADPV-DAVCIEIFDGYKSIITIveESQDFIVSTNHAISLPIQKLNSRRLE 264
Cdd:pfam03417  79 RLLLETCSSVEEAVKLLKEIPRASSFNFILLDAAgNLAVVEVEPGSKDISVR--EANEYLAHTNHFVHESLTAENQNITD 156
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446207356  265 QSTNRYHTLYEHLNRNEQV--SIESLKGLVQKEYPAGLtvhnYEEWFGTLHSVLFDLHECTMNICFGSP 331
Cdd:pfam03417 157 SSISRLERIQFLLSQKESPkdAFELLNDREDGPYSKLR----YKSWEGTLHTALYDPADRKATLCLGNP 221
Ntn_CGH_like cd01935
Choloylglycine hydrolase (CGH)_like. This family of choloylglycine hydrolase-like proteins ...
92-329 1.70e-33

Choloylglycine hydrolase (CGH)_like. This family of choloylglycine hydrolase-like proteins includes conjugated bile acid hydrolase (CBAH), penicillin V acylase (PVA), acid ceramidase (AC), and N-acylethanolamine-hydrolyzing acid amidase (NAAA) which cleave non-peptide carbon-nitrogen bonds in bile salt constituents. These enzymes have an N-terminal nucleophilic cysteine, as do other members of the Ntn hydrolase family to which they belong. This nucleophilic cysteine is exposed by post-translational prossessing of the precursor protein.


Pssm-ID: 238910  Cd Length: 229  Bit Score: 124.39  E-value: 1.70e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356  92 CSHCAVLPKKtdlKHTYVLRNYDLSPVIDdMRFCSTHVEGAYAH--------------SGFSTQYFGRTEGVNEHGLSVT 157
Cdd:cd01935    1 CTSIVAQTKD---GGVYLGRNMDFSFDYE-LRLLVFPRGYQRNGqtgdkskwyakygsGGTSAGYIGLVDGMNEKGLSVS 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356 158 FSACGQPVGNIAGLRKPAVsGLQCFAVIRVLLEKCKNVQEAKSLIEEIPI----------ASNMNLIVADP-VDAVCIEI 226
Cdd:cd01935   77 LLYFPGYAYYPAGIKEGKD-GLPAFELIRWVLENCDSVEEVKEALKKIPIvdfpiplggpAAPLHYILSDKsGDSAVIEP 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356 227 FDGYKSIITIVEesqdFIVSTNHAISlpiqklnsrrLEQSTNRYHTLYEHLNRNEQVSIeslkglvqkeypaglTVHNYE 306
Cdd:cd01935  156 IDGGLKIYDNPW----FGVMTNHPTF----------DWHLPRRFVRVAYLKNTAQKNKE---------------TVEDVK 206
                        250       260
                 ....*....|....*....|...
gi 446207356 307 EWFGTLHSVLFDLHECTMNICFG 329
Cdd:cd01935  207 NLFHILESVPIPNGLTVYTTVMD 229
 
Name Accession Description Interval E-value
C45_proenzyme NF040521
C45 family autoproteolytic acyltransferase/hydolase; Members of this family include hydrolases ...
12-324 1.41e-80

C45 family autoproteolytic acyltransferase/hydolase; Members of this family include hydrolases and N-acyltransferases, and belong to the Ntn (N-terminal nucleophile) hydrolase family. Members have an invariant Cys residue (Cys-103 in XP_002569112.1) required both for autoproteolytic processing into alpha and beta chains and for activity. The family is described by MEROPs as a cysteine protease, family C45, because of its autoproteolytic activity. Characterized members include TAN from Drosophila, which removes beta-alanine from both carcinine and N-beta-alanyl dopamine, and isopenicillin-N N-acyltransferase from various fungi. The latter has been heavily studied because of its role in penicillin biosynthesis.


Pssm-ID: 468523 [Multi-domain]  Cd Length: 312  Bit Score: 249.13  E-value: 1.41e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356  12 KGSHYEIGKQQGEFVKQHPY-----LIPQFIQKENLISHQHWTESRNILHNYCPGINEEIEGFCEVLKIPSENMMY---- 82
Cdd:NF040521   1 SGSPYEIGRQLGELLKELIRdlylaLLRAWGLVSWRELRDFAKEFLAALEAFAPELWEELEGIADGLGLPFEDVLAlnar 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356  83 YYQTLLKAGCSHCAVLPKKtdlKHTYVLRNYDLSPVIDDMRFCSTHVEG---AYAHSGFSTQYFGRTEGVNEHGLSVTFS 159
Cdd:NF040521  81 TEILAAPDGCSTFAVLGED---GEPILARNYDWHPELYDGCLLLTIRPDggpRYASIGYAGLLPGRTDGMNEAGLAVTLN 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356 160 acgqpvgNIAGLRKPAVsGLQCFAVIRVLLEKCKNVQEAKSLIEEIPIASNMNLIVADPV-DAVCIEIFDGYKSIITIVE 238
Cdd:NF040521 158 -------FLDGRKLPGV-GVPVHLLARAILENCKTVDEAIALLKEIPRASSFNLTLADASgRAASVEASPDRVVVVRPED 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356 239 esqDFIVSTNHAISLPIQKLNSRRLEQSTNRYHTLYEHLnrNEQVSIESLKGLVQKEYPAGLTVHNYEEW--FGTLHSVL 316
Cdd:NF040521 230 ---GLLVHTNHFLSPELEEENRIATPSSRERYERLEELL--KGKLDAEDAKALLSDGYPLPICRHPYPDGdrFGTLATVV 304

                 ....*...
gi 446207356 317 FDLHECTM 324
Cdd:NF040521 305 FDPAAGTL 312
COG4927 COG4927
Predicted choloylglycine hydrolase [General function prediction only];
1-261 1.25e-61

Predicted choloylglycine hydrolase [General function prediction only];


Pssm-ID: 443955 [Multi-domain]  Cd Length: 242  Bit Score: 197.87  E-value: 1.25e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356   1 MYQVkgYFSSLKGSHYEIGKQQGEFVKQHPylipQFIQKENLISHQHWTESRNILHNYCPGINEEIEGFCEVLKIPSENM 80
Cdd:COG4927    1 MKKM--RFLRLRGSHYEIGLQLGKLLKELI----IAYLPRGKEKRPFLAEARAALRRYMPELWEELEGLADGLDVPLEEL 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356  81 MYYYQT--LLKAGCSHCAVLPKKtdlkHTYVLRNYDLSPVIDDMRFCST-HVEGAYAHSGFSTQYFGRTEGVNEHGLSVT 157
Cdd:COG4927   75 LLLNGGyyLPLSGCSQFAVAPEG----EPLLARNYDFHPDLYEGRLLLTvQPDGGYAFIGVTDGLIGRLDGMNEKGLAVG 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356 158 FSACGqpvgniaglRKPAVSGLQCFAVIRVLLEKCKNVQEAKSLIEEIPIASNMNLIVADPVD-AVCIEIFDGYKSIIti 236
Cdd:COG4927  151 LNFVG---------RKVAGPGFPIPLLIRYILETCSTVDEAIALLKEIPHASSYNLTLADASGnAAVVEVSPRGVEVR-- 219
                        250       260
                 ....*....|....*....|....*
gi 446207356 237 veESQDFIVSTNHAISLPIQKLNSR 261
Cdd:COG4927  220 --EPNGFLVCTNHFQSLEMAEENRN 242
AAT pfam03417
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase;
107-331 3.68e-56

Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase;


Pssm-ID: 397472  Cd Length: 223  Bit Score: 183.30  E-value: 3.68e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356  107 TYVLRNYDLSPVIDDMRFCSTHVE-GAYAHSGFSTQYFGRTEGVNEHGLSVTFsacgqpvgNIAGLRKPAVSGLQCFAVI 185
Cdd:pfam03417   7 RLLGRNEDYDPETYSHRYLLTAPEdPGFATIGYAGRLPGRTDGINEKGLAMGI--------NFVHLRKLRGDGFPRHFIT 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356  186 RVLLEKCKNVQEAKSLIEEIPIASNMNLIVADPV-DAVCIEIFDGYKSIITIveESQDFIVSTNHAISLPIQKLNSRRLE 264
Cdd:pfam03417  79 RLLLETCSSVEEAVKLLKEIPRASSFNFILLDAAgNLAVVEVEPGSKDISVR--EANEYLAHTNHFVHESLTAENQNITD 156
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446207356  265 QSTNRYHTLYEHLNRNEQV--SIESLKGLVQKEYPAGLtvhnYEEWFGTLHSVLFDLHECTMNICFGSP 331
Cdd:pfam03417 157 SSISRLERIQFLLSQKESPkdAFELLNDREDGPYSKLR----YKSWEGTLHTALYDPADRKATLCLGNP 221
Ntn_CGH_like cd01935
Choloylglycine hydrolase (CGH)_like. This family of choloylglycine hydrolase-like proteins ...
92-329 1.70e-33

Choloylglycine hydrolase (CGH)_like. This family of choloylglycine hydrolase-like proteins includes conjugated bile acid hydrolase (CBAH), penicillin V acylase (PVA), acid ceramidase (AC), and N-acylethanolamine-hydrolyzing acid amidase (NAAA) which cleave non-peptide carbon-nitrogen bonds in bile salt constituents. These enzymes have an N-terminal nucleophilic cysteine, as do other members of the Ntn hydrolase family to which they belong. This nucleophilic cysteine is exposed by post-translational prossessing of the precursor protein.


Pssm-ID: 238910  Cd Length: 229  Bit Score: 124.39  E-value: 1.70e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356  92 CSHCAVLPKKtdlKHTYVLRNYDLSPVIDdMRFCSTHVEGAYAH--------------SGFSTQYFGRTEGVNEHGLSVT 157
Cdd:cd01935    1 CTSIVAQTKD---GGVYLGRNMDFSFDYE-LRLLVFPRGYQRNGqtgdkskwyakygsGGTSAGYIGLVDGMNEKGLSVS 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356 158 FSACGQPVGNIAGLRKPAVsGLQCFAVIRVLLEKCKNVQEAKSLIEEIPI----------ASNMNLIVADP-VDAVCIEI 226
Cdd:cd01935   77 LLYFPGYAYYPAGIKEGKD-GLPAFELIRWVLENCDSVEEVKEALKKIPIvdfpiplggpAAPLHYILSDKsGDSAVIEP 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356 227 FDGYKSIITIVEesqdFIVSTNHAISlpiqklnsrrLEQSTNRYHTLYEHLNRNEQVSIeslkglvqkeypaglTVHNYE 306
Cdd:cd01935  156 IDGGLKIYDNPW----FGVMTNHPTF----------DWHLPRRFVRVAYLKNTAQKNKE---------------TVEDVK 206
                        250       260
                 ....*....|....*....|...
gi 446207356 307 EWFGTLHSVLFDLHECTMNICFG 329
Cdd:cd01935  207 NLFHILESVPIPNGLTVYTTVMD 229
YxeI COG3049
Penicillin V acylase or related amidase, Ntn superfamily [Cell wall/membrane/envelope ...
146-229 1.46e-03

Penicillin V acylase or related amidase, Ntn superfamily [Cell wall/membrane/envelope biogenesis, General function prediction only];


Pssm-ID: 442283  Cd Length: 337  Bit Score: 40.25  E-value: 1.46e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446207356 146 TEGVNEHGLSV---TFSACGQ-PVGNIAGlrKPAVSglqCFAVIRVLLEKCKNVQEAKSLIEEIPI----------ASNM 211
Cdd:COG3049   71 ADGMNEKGLAAallYFPGYADyPKRDKEG--KPNLA---PSEFVQWVLDNFATVEEVKEALKKINFvndpvpglgrVAPL 145
                         90
                 ....*....|....*....
gi 446207356 212 NLIVADP-VDAVCIEIFDG 229
Cdd:COG3049  146 HLSISDAtGDSAVIEYIDG 164
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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