|
Name |
Accession |
Description |
Interval |
E-value |
| thiamin_ThiO |
TIGR02352 |
glycine oxidase ThiO; This family consists of the homotetrameric, FAD-dependent glycine ... |
21-356 |
4.39e-166 |
|
glycine oxidase ThiO; This family consists of the homotetrameric, FAD-dependent glycine oxidase ThiO, from species such as Bacillus subtilis that use glycine in thiamine biosynthesis. In general, members of this family will not be found in species such as E. coli that instead use tyrosine and the ThiH protein. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine]
Pssm-ID: 274092 [Multi-domain] Cd Length: 337 Bit Score: 467.23 E-value: 4.39e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 21 HFLAERGHKVAIVEKQQIASEASKAAAGLLGVQAEWD-EYDPLFDLARESRAIFPQLAEVLREKTGIDIGYEEKGIYRIA 99
Cdd:TIGR02352 1 WELAKRGHSVTLFDRDPMGGGASWAAAGMLAPHAECEyAEDPLFDLALESLRLYPEWLEALKELTGLDTGYHQCGTLVVA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 100 QNEDEKERILHIMDWQQKTGEDSYFLTGDRLREQEPYLSESIIGAVYYPKDGHVIAPELTKAFAHSAAISGADIYEQTEV 179
Cdd:TIGR02352 81 FDEDDVEHLRQLADLQSATGMEVEWLSGRALRRLEPYLSGGIRGAVFYPDDAHVDPRALLKALEKALEKLGVEIIEHTEV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 180 FDIRIENKKVIGIVTSEGMISCEKVVIAGGSWSTKLLGYFHREWGTYPVKGEVVAVKSRKQLLKAPIFQERFYIAPKRGG 259
Cdd:TIGR02352 161 QHIEIRGEKVTAIVTPSGDVQADQVVLAAGAWAGELLPLPLRPVRGQPLRLEAPAVPLLNRPLRAVVYGRRVYIVPRRDG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 260 RYVIGATMKPHTFNKTVQPESITSILERAYTILPALKEAEWESTWAGLRPQSNHEAPYMGEHEEIKGLYACTGHYRNGIL 339
Cdd:TIGR02352 241 RLVVGATMEESGFDTTPTLGGIKELLRDAYTILPALKEARLLETWAGLRPGTPDNLPYIGEHPEDRRLLIATGHYRNGIL 320
|
330
....*....|....*..
gi 446257331 340 LSPVSGQYMADLIEGKQ 356
Cdd:TIGR02352 321 LAPATAEVIADLILGKE 337
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
3-364 |
1.89e-116 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 342.27 E-value: 1.89e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 3 KKYDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIASEASKAAAGLLGVQAEWDEYDPLFDLARESRAIFPQLAEvlre 82
Cdd:COG0665 1 ATADVVVIGGGIAGLSTAYHLARRGLDVTVLERGRPGSGASGRNAGQLRPGLAALADRALVRLAREALDLWRELAA---- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 83 KTGIDIGYEEKGIYRIAQNEDEKERILHIMDWQQKTGEDSYFLTGDRLREQEPYL-SESIIGAVYYPKDGHVIAPELTKA 161
Cdd:COG0665 77 ELGIDCDFRRTGVLYLARTEAELAALRAEAEALRALGLPVELLDAAELREREPGLgSPDYAGGLYDPDDGHVDPAKLVRA 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 162 FAHSAAISGADIYEQTEVFDIRIENKKVIGIVTSEGMISCEKVVIAGGSWSTKLLGYFHREWGTYPVKGEVVAVKSRKQL 241
Cdd:COG0665 157 LARAARAAGVRIREGTPVTGLEREGGRVTGVRTERGTVRADAVVLAAGAWSARLLPMLGLRLPLRPVRGYVLVTEPLPDL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 242 LKAPIFQE-RFYIAPKRGGRYVIGATMKPHTFNKTVQPESITSILERAYTILPALKEAEWESTWAGLRPQSNHEAPYMGE 320
Cdd:COG0665 237 PLRPVLDDtGVYLRPTADGRLLVGGTAEPAGFDRAPTPERLEALLRRLRRLFPALADAEIVRAWAGLRPMTPDGLPIIGR 316
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 446257331 321 HEEIKGLYACTGHYRNGILLSPVSGQYMADLIEGKQENHLLDSL 364
Cdd:COG0665 317 LPGAPGLYVATGHGGHGVTLAPAAGRLLADLILGGEPPLDLAPF 360
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
6-351 |
9.21e-80 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 247.70 E-value: 9.21e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 6 DVAIIGGGVIGSSVAHFLAERGHKVAIVEKQ-QIASEASKAAAGLLGVQAEWDEYDPLFDLARESRAIFpqlaEVLREKT 84
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGdDPGSGASGRNAGLIHPGLRYLEPSELARLALEALDLW----EELEEEL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 85 GIDIGYEEKGIYRIAQNEDEkERILHIMDWQQKTGEDSYFLTGDRLREQEPYLSEsIIGAVYYPKDGHVIAPELTKAFAH 164
Cdd:pfam01266 77 GIDCGFRRCGVLVLARDEEE-EALEKLLAALRRLGVPAELLDAEELRELEPLLPG-LRGGLFYPDGGHVDPARLLRALAR 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 165 SAAISGADIYEQTEVFDIRIENkKVIGIVTSEgmiSCEKVVIAGGSWStKLLGYFHREWGTYPVKGEVVAVKSRK-QLLK 243
Cdd:pfam01266 155 AAEALGVRIIEGTEVTGIEEEG-GVWGVVTTG---EADAVVNAAGAWA-DLLALPGLRLPVRPVRGQVLVLEPLPeALLI 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 244 APIFQER-----FYIAPKRGGRYVIGATMKPHTFNK-TVQPESITSILERAYTILPALKEAEWesTWAGLRPQSNHeAPY 317
Cdd:pfam01266 230 LPVPITVdpgrgVYLRPRADGRLLLGGTDEEDGFDDpTPDPEEIEELLEAARRLFPALADIER--AWAGLRPLPDG-LPI 306
|
330 340 350
....*....|....*....|....*....|....
gi 446257331 318 MGEHEEiKGLYACTGHYRNGILLSPVSGQYMADL 351
Cdd:pfam01266 307 IGRPGS-PGLYLATGHGGHGLTLAPGIGKLLAEL 339
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
1-310 |
3.05e-38 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 141.44 E-value: 3.05e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 1 MCKKYDVAIIGGGVIGSSVAHFLAER-GHKVAIVEKQ-QIASEASKAAAGLL--GVQaewdeYDP--LF-DLARESRAIF 73
Cdd:COG0579 1 MMEMYDVVIIGAGIVGLALARELSRYeDLKVLVLEKEdDVAQESSGNNSGVIhaGLY-----YTPgsLKaRLCVEGNELF 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 74 PQLAEVLrektgiDIGYEEKGIYRIAQNEDEKERILHIMDWQQKTG-EDSYFLTGDRLREQEPYLSESIIGAVYYPKDGH 152
Cdd:COG0579 76 YELCREL------GIPFKRCGKLVVATGEEEVAFLEKLYERGKANGvPGLEILDREELRELEPLLSDEGVAALYSPSTGI 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 153 VIAPELTKAFAHSAAISGADIYEQTEVFDIRIENKKVIgIVTSEGMISCEKVVIAGGSWSTKLL---GYfHREWGTYPVK 229
Cdd:COG0579 150 VDPGALTRALAENAEANGVELLLNTEVTGIEREGDGWE-VTTNGGTIRARFVINAAGLYADRLAqmaGI-GKDFGIFPVK 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 230 GEVVAVKSRKQLLKAPIFQE--------------------RF----YIAPKRGGRY-VIGATMKPHTFNK---------- 274
Cdd:COG0579 228 GEYLVLDKPAELVNAKVYPVpdpgapflgvhltrtidgnlLFgpnaVFVPKKEDSLlDLFESLRFPNFWPmlaknlltky 307
|
330 340 350
....*....|....*....|....*....|....*...
gi 446257331 275 --TVQPESITSILERAYTILPALKEAEWESTWAGLRPQ 310
Cdd:COG0579 308 leSVTSLSKEAFLEALRKYVPELPDEDLIPAFAGIRAQ 345
|
|
| PRK00711 |
PRK00711 |
D-amino acid dehydrogenase; |
7-356 |
2.27e-20 |
|
D-amino acid dehydrogenase;
Pssm-ID: 234819 [Multi-domain] Cd Length: 416 Bit Score: 91.78 E-value: 2.27e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 7 VAIIGGGVIGSSVAHFLAERGHKVAIVEKQ-QIASEASKAAAGLL--GVQAEW--------------DEYDPL-----FD 64
Cdd:PRK00711 3 VVVLGSGVIGVTSAWYLAQAGHEVTVIDRQpGPALETSFANAGQIspGYAAPWaapgvplkaikwlfQRHAPLairpdGD 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 65 ----------------------------LARESRAIFPQLaevlREKTGIDigYEE--KG---IYRIAQNEDEKERIlhi 111
Cdd:PRK00711 83 pfqlrwmwqmlrnctasryavnksrmvrLAEYSRDCLKAL----RAETGIQ--YEGrqGGtlqLFRTQQQLDAAAKD--- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 112 MDWQQKTGEDSYFLTGDRLREQEPYL---SESIIGAVYYPKDghviapE------LTKAFAHSAAISGADIYEQTEVFDI 182
Cdd:PRK00711 154 IAVLEEAGVPYELLDRDELAAVEPALagvRHKLVGGLRLPND------EtgdcqlFTQRLAAMAEQLGVKFRFNTPVDGL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 183 RIENKKVIGIVTSEGMISCEKVVIAGGSWSTKLLGYFHREWGTYPVKGE--VVAVKSRKqllKAP---IFQERFYIAPKR 257
Cdd:PRK00711 228 LVEGGRITGVQTGGGVITADAYVVALGSYSTALLKPLGVDIPVYPLKGYslTVPITDED---RAPvstVLDETYKIAITR 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 258 -GGRYVIGATMKPHTFNKTVQPESItSILERAYTIL-PA---LKEAEWestWAGLRPQSNHEAPYMGEhEEIKGLYACTG 332
Cdd:PRK00711 305 fDDRIRVGGMAEIVGFDLRLDPARR-ETLEMVVRDLfPGggdLSQATF---WTGLRPMTPDGTPIVGA-TRYKNLWLNTG 379
|
410 420
....*....|....*....|....
gi 446257331 333 HYRNGILLSPVSGQYMADLIEGKQ 356
Cdd:PRK00711 380 HGTLGWTMACGSGQLLADLISGRK 403
|
|
| mnmC |
PRK01747 |
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ... |
6-354 |
1.91e-16 |
|
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;
Pssm-ID: 234978 [Multi-domain] Cd Length: 662 Bit Score: 80.66 E-value: 1.91e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 6 DVAIIGGGVIGSSVAHFLAERGHKVAIVEK-QQIASEASKAAAGLLgvqaewdeYdPLFD-----LARESRAIFpqlAEV 79
Cdd:PRK01747 262 DAAIIGGGIAGAALALALARRGWQVTLYEAdEAPAQGASGNRQGAL--------Y-PLLSkddnaLSRFFRAAF---LFA 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 80 LR-----EKTGIDIGYEEKGIYRIAQNEDEKERilhIMDWQQKTGEDSYF--LTGDRLREQE----PYlsesiiGAVYYP 148
Cdd:PRK01747 330 RRfydalPAAGVAFDHDWCGVLQLAWDEKSAEK---IAKMLALGLPAELAraLDAEEAEELAglpvPC------GGIFYP 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 149 KDGHVIAPELTKA-FAHSAAisGADIYEQTEVFDIRIENKKVigIVTSEG--MISCEKVVIAGGSWSTKLLGYfhREWGT 225
Cdd:PRK01747 401 QGGWLCPAELCRAlLALAGQ--QLTIHFGHEVARLEREDDGW--QLDFAGgtLASAPVVVLANGHDAARFAQT--AHLPL 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 226 YPVKGEV--VAVKSRKQLLKAPIFQERfYIAP-KRGGRYVIGATMKPH----TFNKTVQPESITSILEraytILPALKEA 298
Cdd:PRK01747 475 YSVRGQVshLPTTPALSALKQVLCYDG-YLTPqPANGTHCIGASYDRDdtdtAFREADHQENLERLAE----CLPQALWA 549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 299 EWEST-----WAGLR----------------------------PQSNHEAPYMgeheeiKGLYACTGHYRNGILLSPVSG 345
Cdd:PRK01747 550 KEVDVsalqgRVGFRcasrdrlpmvgnvpdeaatlaeyaalanQQPARDAPRL------PGLYVAGALGSRGLCSAPLGA 623
|
....*....
gi 446257331 346 QYMADLIEG 354
Cdd:PRK01747 624 ELLASQIEG 632
|
|
| PRK12409 |
PRK12409 |
D-amino acid dehydrogenase small subunit; Provisional |
7-355 |
2.69e-12 |
|
D-amino acid dehydrogenase small subunit; Provisional
Pssm-ID: 237093 [Multi-domain] Cd Length: 410 Bit Score: 67.36 E-value: 2.69e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 7 VAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIAS-EASKAAAGLLGV-QAE-WDEYD--------------PLFDLARES 69
Cdd:PRK12409 4 IAVIGAGITGVTTAYALAQRGYQVTVFDRHRYAAmETSFANGGQLSAsNAEvWNHWAtvlkglkwmlrkdaPLLLNPKPS 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 70 RAIFPQLAEVLR---------------------------EKTGIDIGYEEKGIYRIAQNEDEKERILHIMDWQQKTGEDS 122
Cdd:PRK12409 84 WHKYSWLAEFLAhipnyrantietvrlaiaarkhlfdiaEREGIDFDLERRGILHIYHDKAGFDHAKRVNALLAEGGLER 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 123 YFLTGDRLREQEPYLSESIIGAVYYPKDGHVIAPELTKAFAHSAAISGADIYEQTEVFDIRIENKKVIGIVTSEG----- 197
Cdd:PRK12409 164 RAVTPEEMRAIEPTLTGEYYGGYYTPSDSTGDIHKFTTGLAAACARLGVQFRYGQEVTSIKTDGGGVVLTVQPSAehpsr 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 198 MISCEKVVIAGGSWSTKLLGYFHREWGTYPVKGEVVAV-----KSRKqllKAP---IFQERFYIAPKRGG--RYVIGATM 267
Cdd:PRK12409 244 TLEFDGVVVCAGVGSRALAAMLGDRVNVYPVKGYSITVnlddeASRA---AAPwvsLLDDSAKIVTSRLGadRFRVAGTA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 268 KPHTFNKTVQPESITSILERAYTILPALkeaeweST-----WAGLRPQSNHEAPYMGEHEEiKGLYACTGHYRNGILLSP 342
Cdd:PRK12409 321 EFNGYNRDIRADRIRPLVDWVRRNFPDV------STrrvvpWAGLRPMMPNMMPRVGRGRR-PGVFYNTGHGHLGWTLSA 393
|
410
....*....|...
gi 446257331 343 VSGQYMADLIEGK 355
Cdd:PRK12409 394 ATADLVAQVVAQK 406
|
|
| PRK11728 |
PRK11728 |
L-2-hydroxyglutarate oxidase; |
5-218 |
2.25e-11 |
|
L-2-hydroxyglutarate oxidase;
Pssm-ID: 183292 [Multi-domain] Cd Length: 393 Bit Score: 64.46 E-value: 2.25e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 5 YDVAIIGGGVIGSSVAHFLAER--GHKVAIVEKqqiasEASKAA-----------AGLLgvqaewdeYDP---LFDLARE 68
Cdd:PRK11728 3 YDFVIIGGGIVGLSTAMQLQERypGARIAVLEK-----ESGPARhqtghnsgvihAGVY--------YTPgslKARFCRR 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 69 SRAIfpqLAEVLREKtgiDIGYEEKGIYRIAQNEDEKERILHIMDWQQKTGEDSYFLTGDRLREQEPYLSEsiIGAVYYP 148
Cdd:PRK11728 70 GNEA---TKAFCDQH---GIPYEECGKLLVATSELELERMEALYERARANGIEVERLDAEELREREPNIRG--LGAIFVP 141
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446257331 149 KDGHVIAPELTKAFAHSAAISGADIYEQTEVFDIRIENKKVIgIVTSEGMISCEKVVIAGGSWS---TKLLGY 218
Cdd:PRK11728 142 STGIVDYRAVAEAMAELIQARGGEIRLGAEVTALDEHANGVV-VRTTQGEYEARTLINCAGLMSdrlAKMAGL 213
|
|
| solA |
PRK11259 |
N-methyl-L-tryptophan oxidase; |
4-219 |
5.24e-10 |
|
N-methyl-L-tryptophan oxidase;
Pssm-ID: 236887 [Multi-domain] Cd Length: 376 Bit Score: 60.23 E-value: 5.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 4 KYDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIA-SEAS--------KAAAGllgvqaEWDEYDPLfdlARESRAIFP 74
Cdd:PRK11259 3 RYDVIVIGLGSMGSAAGYYLARRGLRVLGLDRFMPPhQQGSshgdtriiRHAYG------EGPAYVPL---VLRAQELWR 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 75 QLA----EVLREKTG-IDIGYEE----KGIYRIAQNED-EKERilhimdwqqktgedsyfLTGDRLREQEPY--LSESII 142
Cdd:PRK11259 74 ELEresgEPLFVRTGvLNLGPADsdflANSIRSARQHGlPHEV-----------------LDAAEIRRRFPQfrLPDGYI 136
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446257331 143 GavYYPKDGHVIAPELT-KAFAHSAAISGADIYEQTEVFDIRIENKKVIgIVTSEGMISCEKVVIAGGSWSTKLLGYF 219
Cdd:PRK11259 137 A--LFEPDGGFLRPELAiKAHLRLAREAGAELLFNEPVTAIEADGDGVT-VTTADGTYEAKKLVVSAGAWVKDLLPPL 211
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
6-193 |
2.63e-09 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 58.07 E-value: 2.63e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 6 DVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIASEASKAAAGLL-----GVQAEWDEYD-PLFDLARESRAIFPQ-LAE 78
Cdd:pfam00890 1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGGATAWSSGGIdalgnPPQGGIDSPElHPTDTLKGLDELADHpYVE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 79 VLR----------EKTGIDIGYEEKGIYRIAQNEDEKERILHIMDwqqktgedsyfltgdrlreqepylsesiigaVYYP 148
Cdd:pfam00890 81 AFVeaapeavdwlEALGVPFSRTEDGHLDLRPLGGLSATWRTPHD-------------------------------AADR 129
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 446257331 149 KDGHVIAPELTKAFAHSAAISGADIYEQTEVFDIRIENKKVIGIV 193
Cdd:pfam00890 130 RRGLGTGHALLARLLEGLRKAGVDFQPRTAADDLIVEDGRVTGAV 174
|
|
| glpA |
PRK11101 |
anaerobic glycerol-3-phosphate dehydrogenase subunit A; |
6-230 |
6.81e-09 |
|
anaerobic glycerol-3-phosphate dehydrogenase subunit A;
Pssm-ID: 236847 [Multi-domain] Cd Length: 546 Bit Score: 57.33 E-value: 6.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 6 DVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIASEASKAAAGLLGVQAEWDEYDPlfDLARE---SRAIFPQLAEVLRE 82
Cdd:PRK11101 8 DVIIIGGGATGAGIARDCALRGLRCILVERHDIATGATGRNHGLLHSGARYAVTDA--ESAREcisENQILKRIARHCVE 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 83 KTgidigyeeKGIYrIAQNEDEkerilhiMDWQ-------QKTGEDSYFLTGDRLREQEPYLSESIIGAVYYPkDGHVIA 155
Cdd:PRK11101 86 PT--------DGLF-ITLPEDD-------LAFQatfiracEEAGIEAEAIDPQQALILEPAVNPALIGAVKVP-DGTVDP 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 156 PELTKAFAHSAAISGADIYEQTEVFDIRIENKKVIGI--------VTSEgmISCEKVVIAGGSWSTKLLGYFHREWGTYP 227
Cdd:PRK11101 149 FRLTAANMLDAKEHGAQILTYHEVTGLIREGDTVCGVrvrdhltgETQE--IHAPVVVNAAGIWGQHIAEYADLRIRMFP 226
|
...
gi 446257331 228 VKG 230
Cdd:PRK11101 227 AKG 229
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
3-209 |
8.29e-07 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 50.60 E-value: 8.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 3 KKYDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIASEASKAAAGLL-----GVQAEWDEYDP---LFDLARESRAIFP 74
Cdd:COG1053 2 HEYDVVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGGHTAAAQGGInaagtNVQKAAGEDSPeehFYDTVKGGDGLAD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 75 Q-LAEVLREKTGIDIGY-EEKGiyriaqnedekerilhiMDWQQKTGEDSYFLTGdrlreqepylseSIIGAVYYPKD-- 150
Cdd:COG1053 82 QdLVEALAEEAPEAIDWlEAQG-----------------VPFSRTPDGRLPQFGG------------HSVGRTCYAGDgt 132
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446257331 151 GHviapELTKAFAHSAAISGADIYEQTEVFDIRIENKKVIGIVTSEG-----MISCEKVVIAGG 209
Cdd:COG1053 133 GH----ALLATLYQAALRLGVEIFTETEVLDLIVDDGRVVGVVARDRtgeivRIRAKAVVLATG 192
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
3-45 |
1.88e-06 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 49.17 E-value: 1.88e-06
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 446257331 3 KKYDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIASEASKA 45
Cdd:COG0654 2 MRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRG 44
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
12-264 |
2.66e-06 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 48.43 E-value: 2.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 12 GGVIGSSVAHFLAERGHKVAIVEKQQIAseASKAAAGLLGVQAeWDEYDPLfdlaresraifPQLAEVLREKTGIDIgye 91
Cdd:COG0644 1 AGPAGSAAARRLARAGLSVLLLEKGSFP--GDKICGGGLLPRA-LEELEPL-----------GLDEPLERPVRGARF--- 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 92 ekgiyriaqnedekerilhimdwqqktgedsYFLTGDRLREQEPYlsesiigAVYYpkdgHVIAPELTKAFAHSAAISGA 171
Cdd:COG0644 64 -------------------------------YSPGGKSVELPPGR-------GGGY----VVDRARFDRWLAEQAEEAGA 101
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 172 DIYEQTEVFDIRIENKKVIGIVTSEGMISCEKVVIAGGSWS--TKLLGYFHREWGTYPVkgeVVAVKSRKQLLKAPIFQE 249
Cdd:COG0644 102 EVRTGTRVTDVLRDDGRVVVRTGDGEEIRADYVVDADGARSllARKLGLKRRSDEPQDY---ALAIKEHWELPPLEGVDP 178
|
250 260
....*....|....*....|....*....
gi 446257331 250 R--------------FYIAPKRGGRYVIG 264
Cdd:COG0644 179 GavefffgegapggyGWVFPLGDGRVSVG 207
|
|
| PRK05329 |
PRK05329 |
glycerol-3-phosphate dehydrogenase subunit GlpB; |
3-68 |
5.05e-06 |
|
glycerol-3-phosphate dehydrogenase subunit GlpB;
Pssm-ID: 235412 Cd Length: 422 Bit Score: 47.92 E-value: 5.05e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 3 KKYDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIASEASKAAAGLLGV----QAEWDEYDPLFDLARE 68
Cdd:PRK05329 1 MKFDVLVIGGGLAGLTAALAAAEAGKRVALVAKGQGALHFSSGSIDLLGYlpdgQPVSDPFEALAALAEQ 70
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
3-217 |
1.11e-05 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 47.15 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 3 KKYDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQI----ASEASK----------------------AAAGLLGvQAEW 56
Cdd:COG1233 2 MMYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTpggrARTFERpgfrfdvgpsvltmpgvlerlfRELGLED-YLEL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 57 DEYDPLFDLARE--SRAIFP----QLAEVLREKTGIDI-GYEE-----KGIYRIAQN---EDEKERILHIMDWQQ----- 116
Cdd:COG1233 81 VPLDPAYRVPFPdgRALDLPrdleRTAAELERLFPGDAeAYRRflaelRRLYDALLEdllYRPLLSLRDLLRPLAlarll 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 117 ----KTGED---SYFlTGDRLRE----------QEPYLSESIIGA---------VYYPKDGhviAPELTKAFAHSAAISG 170
Cdd:COG1233 161 rlllRSLRDllrRYF-KDPRLRAllagqalylgLSPDRTPALYALiayleyaggVWYPKGG---MGALADALARLAEELG 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 446257331 171 ADIYEQTEVFDIRIENKKVIGIVTSEG-MISCEKVVIAGGSWST--KLLG 217
Cdd:COG1233 237 GEIRTGAEVERILVEGGRATGVRLADGeEIRADAVVSNADPAHTylRLLG 286
|
|
| PRK08849 |
PRK08849 |
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional |
3-45 |
1.65e-05 |
|
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Pssm-ID: 181564 [Multi-domain] Cd Length: 384 Bit Score: 46.30 E-value: 1.65e-05
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 446257331 3 KKYDVAIIGGGVIGSSVAHFLAERGHKVAIVE-KQQIASEASKA 45
Cdd:PRK08849 2 NKYDIAVVGGGMVGAATALGFAKQGRSVAVIEgGEPKAFEPSQP 45
|
|
| PRK13369 |
PRK13369 |
glycerol-3-phosphate dehydrogenase; Provisional |
5-49 |
1.97e-05 |
|
glycerol-3-phosphate dehydrogenase; Provisional
Pssm-ID: 237365 [Multi-domain] Cd Length: 502 Bit Score: 46.50 E-value: 1.97e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 446257331 5 YDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIASEASKAAAGL 49
Cdd:PRK13369 7 YDLFVIGGGINGAGIARDAAGRGLKVLLCEKDDLAQGTSSRSGKL 51
|
|
| PRK07364 |
PRK07364 |
FAD-dependent hydroxylase; |
5-47 |
2.15e-05 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236001 [Multi-domain] Cd Length: 415 Bit Score: 46.17 E-value: 2.15e-05
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 446257331 5 YDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIASEASKAAA 47
Cdd:PRK07364 19 YDVAIVGGGIVGLTLAAALKDSGLRIALIEAQPAEAAAAKGQA 61
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
3-35 |
2.34e-05 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 45.94 E-value: 2.34e-05
10 20 30
....*....|....*....|....*....|...
gi 446257331 3 KKYDVAIIGGGVIGSSVAHFLAERGHKVAIVEK 35
Cdd:PRK06292 2 EKYDVIVIGAGPAGYVAARRAAKLGKKVALIEK 34
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
4-304 |
2.57e-05 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 45.78 E-value: 2.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 4 KYDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIASEASKaAAGLlgvqaewdeydplfdlarESRAIfpqlaEVLRek 83
Cdd:pfam01494 1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERHATTSVLPR-AHGL------------------NQRTM-----ELLR-- 54
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 84 tgiDIGYEEKgIYRiaqnEDEKERILHIMDWQQKTGEDSYFLTGdrlreqepylsesiigavyyPKDGHVIA-PELTKAF 162
Cdd:pfam01494 55 ---QAGLEDR-ILA----EGVPHEGMGLAFYNTRRRADLDFLTS--------------------PPRVTVYPqTELEPIL 106
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 163 AHSAAISGADIYEQTEVFDIRIENKKVIGIVTSEG-----MISCEKVVIAGGSWST--KLLGyFHRE------WGTYPVK 229
Cdd:pfam01494 107 VEHAEARGAQVRFGTEVLSLEQDGDGVTAVVRDRRdgeeyTVRAKYLVGCDGGRSPvrKTLG-IEFEgfegvpFGSLDVL 185
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 230 GEVVAVksrKQLLKAPIFQERFYIAPKRGG-----------RYVIGATMKPHTFNKTVQ--PESITSILERAYTILPALK 296
Cdd:pfam01494 186 FDAPDL---SDPVERAFVHYLIYAPHSRGFmvgpwrsagreRYYVQVPWDEEVEERPEEftDEELKQRLRSIVGIDLALV 262
|
....*...
gi 446257331 297 EAEWESTW 304
Cdd:pfam01494 263 EILWKSIW 270
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
9-36 |
4.38e-05 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 40.98 E-value: 4.38e-05
10 20
....*....|....*....|....*...
gi 446257331 9 IIGGGVIGSSVAHFLAERGHKVAIVEKQ 36
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEKR 28
|
|
| GlpB |
COG3075 |
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]; |
4-37 |
5.91e-05 |
|
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];
Pssm-ID: 442309 Cd Length: 415 Bit Score: 44.79 E-value: 5.91e-05
10 20 30
....*....|....*....|....*....|....
gi 446257331 4 KYDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQ 37
Cdd:COG3075 2 KFDVVVIGGGLAGLTAAIRAAEAGLRVAIVSAGQ 35
|
|
| GlpA |
COG0578 |
Glycerol-3-phosphate dehydrogenase [Energy production and conversion]; Glycerol-3-phosphate ... |
23-309 |
6.30e-05 |
|
Glycerol-3-phosphate dehydrogenase [Energy production and conversion]; Glycerol-3-phosphate dehydrogenase is part of the Pathway/BioSystem: Isoprenoid biosynthesis
Pssm-ID: 440343 [Multi-domain] Cd Length: 501 Bit Score: 44.74 E-value: 6.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 23 LAERGHKVAIVEKQQIASEASKAAAGLL--GV----QAEwdeydplFDLARES---RAIF----PQLAEVLR-----EKT 84
Cdd:COG0578 3 AAGRGLSVALVEKGDFASGTSSRSSKLIhgGLryleQGE-------FRLVREAlreREVLlrnaPHLVRPLPfllplYKG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 85 GidigyeEKG--IYRIAqnedekeriLHIMDW--QQKTGEDSYFLTGDRLREQEPYLS-ESIIGAVYYpKDGHViAPE-L 158
Cdd:COG0578 76 G------ERPawLIRAG---------LFLYDLlaGRKGLPRHRRLSRAEALALAPLLRpDGLRGGFEY-YDAQV-DDArL 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 159 TKAFAHSAAISGADIYEQTEVFDIRIENKKVIGIVTsEGMISCE------KVVI-AGGSWSTKLLGYFHREWGTY--PVK 229
Cdd:COG0578 139 VLELARTAAERGAVVLNYTRVTGLLRDGGRVWGVTV-RDRLTGEeftvraRVVVnATGPWVDELRALDGPKAPRRvrPSK 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 230 GE--VVAvKSRKQLLKAPIFQER-----FYIAPkRGGRYVIGATMKPHTFNK---TVQPESITSILERAYTILPA-LKEA 298
Cdd:COG0578 218 GShlVVP-RLFLPLDDALYIFQNtdgrvVFAIP-WEGRTLIGTTDTDYDGDPdepAATEEEIDYLLEAANRYFARpLTRD 295
|
330
....*....|.
gi 446257331 299 EWESTWAGLRP 309
Cdd:COG0578 296 DVVSTYAGVRP 306
|
|
| GG-red-SF |
TIGR02032 |
geranylgeranyl reductase family; This model represents a subfamily which includes ... |
5-212 |
7.51e-05 |
|
geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 273936 [Multi-domain] Cd Length: 295 Bit Score: 43.85 E-value: 7.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 5 YDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIASEasKAAAGLLGvQAEWDEYDPLFDLARESRaifpqlaevlrekt 84
Cdd:TIGR02032 1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRY--KPCGGALS-PRALEELDLPGELIVNLV-------------- 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 85 gidigyeeKGIYRIAQNEDEKErilhimdwqqktgedsyfltgdRLREQEPylsesiigavyypkdGHVIA-PELTKAFA 163
Cdd:TIGR02032 64 --------RGARFFSPNGDSVE----------------------IPIETEL---------------AYVIDrDAFDEQLA 98
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 446257331 164 HSAAISGADIYEQTEVFDIRIENKKVIGIV-TSEGMISCEKVVIAGGSWS 212
Cdd:TIGR02032 99 ERAQEAGAELRLGTRVLDVEIHDDRVVVIVrGSEGTVTAKIVIGADGSRS 148
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
3-38 |
9.21e-05 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 44.31 E-value: 9.21e-05
10 20 30
....*....|....*....|....*....|....*.
gi 446257331 3 KKYDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQI 38
Cdd:COG1249 2 KDYDLVVIGAGPGGYVAAIRAAQLGLKVALVEKGRL 37
|
|
| COG3349 |
COG3349 |
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ... |
6-34 |
1.20e-04 |
|
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];
Pssm-ID: 442577 [Multi-domain] Cd Length: 445 Bit Score: 43.69 E-value: 1.20e-04
10 20
....*....|....*....|....*....
gi 446257331 6 DVAIIGGGVIGSSVAHFLAERGHKVAIVE 34
Cdd:COG3349 5 RVVVVGGGLAGLAAAVELAEAGFRVTLLE 33
|
|
| PRK06129 |
PRK06129 |
3-hydroxyacyl-CoA dehydrogenase; Validated |
7-81 |
1.22e-04 |
|
3-hydroxyacyl-CoA dehydrogenase; Validated
Pssm-ID: 235706 [Multi-domain] Cd Length: 308 Bit Score: 43.49 E-value: 1.22e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446257331 7 VAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIASEASKA-AAGLLGVQAEWD---EYDPLFDLARESRAifPQLAEVLR 81
Cdd:PRK06129 5 VAIIGAGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAyIAGRLEDLAAFDlldGEAPDAVLARIRVT--DSLADAVA 81
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
7-35 |
1.54e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 43.34 E-value: 1.54e-04
10 20
....*....|....*....|....*....
gi 446257331 7 VAIIGGGVIGSSVAHFLAERGHKVAIVEK 35
Cdd:PRK07233 2 IAIVGGGIAGLAAAYRLAKRGHEVTVFEA 30
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
5-34 |
1.66e-04 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 43.08 E-value: 1.66e-04
10 20 30
....*....|....*....|....*....|
gi 446257331 5 YDVAIIGGGVIGSSVAHFLAERGHKVAIVE 34
Cdd:pfam07992 1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIE 30
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
7-34 |
1.79e-04 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 39.49 E-value: 1.79e-04
10 20
....*....|....*....|....*...
gi 446257331 7 VAIIGGGVIGSSVAHFLAERGHKVAIVE 34
Cdd:pfam00070 2 VVVVGGGYIGLELAGALARLGSKVTVVE 29
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
4-35 |
2.05e-04 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 42.90 E-value: 2.05e-04
10 20 30
....*....|....*....|....*....|..
gi 446257331 4 KYDVAIIGGGVIGSSVAHFLAERGHKVAIVEK 35
Cdd:COG1232 1 MKRVAVIGGGIAGLTAAYRLAKAGHEVTVLEA 32
|
|
| ubiF |
PRK08020 |
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed |
3-36 |
2.05e-04 |
|
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
Pssm-ID: 181199 [Multi-domain] Cd Length: 391 Bit Score: 43.05 E-value: 2.05e-04
10 20 30
....*....|....*....|....*....|....
gi 446257331 3 KKYDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQ 36
Cdd:PRK08020 4 QPTDIAIVGGGMVGAALALGLAQHGFSVAVLEHA 37
|
|
| 3HCDH_N |
pfam02737 |
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; This family also includes lambda ... |
7-55 |
2.60e-04 |
|
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; This family also includes lambda crystallin.
Pssm-ID: 397037 [Multi-domain] Cd Length: 180 Bit Score: 41.37 E-value: 2.60e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 446257331 7 VAIIGGGVIGSSVAHFLAERGHKVAIVE-KQQIASEASKAAAGLLGVQAE 55
Cdd:pfam02737 2 VAVIGAGTMGAGIAQVFALAGLEVVLVDiSEEALEKALERIESSLERLVE 51
|
|
| PRK07608 |
PRK07608 |
UbiH/UbiF family hydroxylase; |
4-36 |
2.69e-04 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181057 [Multi-domain] Cd Length: 388 Bit Score: 42.63 E-value: 2.69e-04
10 20 30
....*....|....*....|....*....|...
gi 446257331 4 KYDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQ 36
Cdd:PRK07608 5 KFDVVVVGGGLVGASLALALAQSGLRVALLAPR 37
|
|
| TrkA |
COG0569 |
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion ... |
7-35 |
3.21e-04 |
|
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and metabolism, Signal transduction mechanisms];
Pssm-ID: 440335 [Multi-domain] Cd Length: 296 Bit Score: 41.98 E-value: 3.21e-04
10 20
....*....|....*....|....*....
gi 446257331 7 VAIIGGGVIGSSVAHFLAERGHKVAIVEK 35
Cdd:COG0569 98 VIIIGAGRVGRSLARELEEEGHDVVVIDK 126
|
|
| glycerol3P_GlpB |
TIGR03378 |
glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; Members of this protein family are ... |
5-51 |
3.21e-04 |
|
glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; Members of this protein family are the B subunit, product of the glpB gene, of a three-subunit, membrane-anchored, FAD-dependent anaerobic glycerol-3-phosphate dehydrogenase. [Energy metabolism, Anaerobic]
Pssm-ID: 213807 Cd Length: 419 Bit Score: 42.31 E-value: 3.21e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 446257331 5 YDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIASEASKAAAGLLG 51
Cdd:TIGR03378 1 FDVIIIGGGLAGLSCALRLAEAGKKCAIIAAGQSALHFSSGSLDLLS 47
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
5-35 |
4.06e-04 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 42.16 E-value: 4.06e-04
10 20 30
....*....|....*....|....*....|.
gi 446257331 5 YDVAIIGGGVIGSSVAHFLAERGHKVAIVEK 35
Cdd:COG2072 7 VDVVVIGAGQAGLAAAYHLRRAGIDFVVLEK 37
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
7-36 |
6.02e-04 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 41.66 E-value: 6.02e-04
10 20 30
....*....|....*....|....*....|
gi 446257331 7 VAIIGGGVIGSSVAHFLAERGHKVAIVEKQ 36
Cdd:COG0493 124 VAVVGSGPAGLAAAYQLARAGHEVTVFEAL 153
|
|
| glpD |
PRK12266 |
glycerol-3-phosphate dehydrogenase; Reviewed |
1-45 |
6.53e-04 |
|
glycerol-3-phosphate dehydrogenase; Reviewed
Pssm-ID: 237027 [Multi-domain] Cd Length: 508 Bit Score: 41.67 E-value: 6.53e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 446257331 1 MCKKYDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIASEASKA 45
Cdd:PRK12266 3 MMETYDLLVIGGGINGAGIARDAAGRGLSVLLCEQDDLASATSSA 47
|
|
| PRK06370 |
PRK06370 |
FAD-containing oxidoreductase; |
1-35 |
7.12e-04 |
|
FAD-containing oxidoreductase;
Pssm-ID: 235787 [Multi-domain] Cd Length: 463 Bit Score: 41.34 E-value: 7.12e-04
10 20 30
....*....|....*....|....*....|....*
gi 446257331 1 MCKKYDVAIIGGGVIGSSVAHFLAERGHKVAIVEK 35
Cdd:PRK06370 2 PAQRYDAIVIGAGQAGPPLAARAAGLGMKVALIER 36
|
|
| PRK09126 |
PRK09126 |
FAD-dependent hydroxylase; |
3-48 |
7.96e-04 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236385 [Multi-domain] Cd Length: 392 Bit Score: 41.08 E-value: 7.96e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 446257331 3 KKYDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIASEASKAAAG 48
Cdd:PRK09126 2 MHSDIVVVGAGPAGLSFARSLAGSGLKVTLIERQPLAALADPAFDG 47
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
4-60 |
7.99e-04 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 41.44 E-value: 7.99e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 446257331 4 KYDVAIIGGGVIGSSVAHFLAERgHKVAIVEKQQIASEASKAAAGllGVQAEWDEYD 60
Cdd:PRK09077 8 QCDVLIIGSGAAGLSLALRLAEH-RRVAVLSKGPLSEGSTFYAQG--GIAAVLDETD 61
|
|
| PRK08213 |
PRK08213 |
gluconate 5-dehydrogenase; Provisional |
7-88 |
1.00e-03 |
|
gluconate 5-dehydrogenase; Provisional
Pssm-ID: 181295 [Multi-domain] Cd Length: 259 Bit Score: 40.31 E-value: 1.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 7 VAIIGGGV--IGSSVAHFLAERGHKVAIVEKQQIASEASKAAAGLLGVQAEWDEYdplfDLARESrAIFPQLAEVLREKT 84
Cdd:PRK08213 14 TALVTGGSrgLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAA----DVADEA-DIERLAEETLERFG 88
|
....
gi 446257331 85 GIDI 88
Cdd:PRK08213 89 HVDI 92
|
|
| PRK08850 |
PRK08850 |
2-octaprenyl-6-methoxyphenol hydroxylase; Validated |
1-36 |
1.07e-03 |
|
2-octaprenyl-6-methoxyphenol hydroxylase; Validated
Pssm-ID: 236341 [Multi-domain] Cd Length: 405 Bit Score: 40.91 E-value: 1.07e-03
10 20 30
....*....|....*....|....*....|....*.
gi 446257331 1 MCKKYDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQ 36
Cdd:PRK08850 1 MMQSVDVAIIGGGMVGLALAAALKESDLRIAVIEGQ 36
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
1-60 |
1.22e-03 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 40.86 E-value: 1.22e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 1 MCKKYDVAIIGGGVIGSSVAHFLAERGhKVAIVEKQQIASEASKAAAGllGVQAEWDEYD 60
Cdd:COG0029 1 ERLKTDVLVIGSGIAGLSAALKLAERG-RVTLLTKGELGESNTRWAQG--GIAAVLDPGD 57
|
|
| mhpA |
PRK06183 |
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase; |
5-36 |
1.96e-03 |
|
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
Pssm-ID: 235727 [Multi-domain] Cd Length: 500 Bit Score: 39.89 E-value: 1.96e-03
10 20 30
....*....|....*....|....*....|..
gi 446257331 5 YDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQ 36
Cdd:PRK06183 11 TDVVIVGAGPVGLTLANLLGQYGVRVLVLERW 42
|
|
| PRK12771 |
PRK12771 |
putative glutamate synthase (NADPH) small subunit; Provisional |
7-36 |
2.13e-03 |
|
putative glutamate synthase (NADPH) small subunit; Provisional
Pssm-ID: 237198 [Multi-domain] Cd Length: 564 Bit Score: 39.86 E-value: 2.13e-03
10 20 30
....*....|....*....|....*....|
gi 446257331 7 VAIIGGGVIGSSVAHFLAERGHKVAIVEKQ 36
Cdd:PRK12771 140 VAVIGGGPAGLSAAYHLRRMGHAVTIFEAG 169
|
|
| PLN02464 |
PLN02464 |
glycerol-3-phosphate dehydrogenase |
5-209 |
2.19e-03 |
|
glycerol-3-phosphate dehydrogenase
Pssm-ID: 215257 [Multi-domain] Cd Length: 627 Bit Score: 40.15 E-value: 2.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 5 YDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIASEASKAAAGLL--GV--------QAEWDEYDPLFDLARESRAIF- 73
Cdd:PLN02464 72 LDVLVVGGGATGAGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIhgGVrylekavfQLDYGQLKLVFHALEERKQLIe 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 74 --PQLAEVLREKT----GIDIGYEEKGI--YRIAQNedekERILHIMDWQQKTGEDSYFLTGDRLREQepylsESIIGA- 144
Cdd:PLN02464 152 naPHLCHALPIMTpcydWFEVPYYWAGLkaYDLVAG----PRLLHLSRYYSAKESLELFPTLAKKGKD-----GSLKGTv 222
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446257331 145 VYYpkDGHVIAPELTKAFAHSAAISGADIYEQTEVFDIrIEN---KKVIGIVTSEGMISCE------KVVIAGG 209
Cdd:PLN02464 223 VYY--DGQMNDSRLNVALACTAALAGAAVLNYAEVVSL-IKDestGRIVGARVRDNLTGKEfdvyakVVVNAAG 293
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
7-88 |
3.13e-03 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 39.02 E-value: 3.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 7 VAIIGGGVIGSSVAHFLAERGHKVAIVEkqqiaseaskAAAGLLGVqaewdeYDPlfDLAResraifpQLAEVLREKtGI 86
Cdd:COG0446 127 AVVIGGGPIGLELAEALRKRGLKVTLVE----------RAPRLLGV------LDP--EMAA-------LLEEELREH-GV 180
|
..
gi 446257331 87 DI 88
Cdd:COG0446 181 EL 182
|
|
| PRK06416 |
PRK06416 |
dihydrolipoamide dehydrogenase; Reviewed |
5-60 |
3.37e-03 |
|
dihydrolipoamide dehydrogenase; Reviewed
Pssm-ID: 235798 [Multi-domain] Cd Length: 462 Bit Score: 39.36 E-value: 3.37e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446257331 5 YDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQ----------IASEASKAAAGL---------LGVQAEWDEYD 60
Cdd:PRK06416 5 YDVIVIGAGPGGYVAAIRAAQLGLKVAIVEKEKlggtclnrgcIPSKALLHAAERadearhsedFGIKAENVGID 79
|
|
| HdrA |
COG1148 |
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion]; |
6-36 |
3.38e-03 |
|
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
Pssm-ID: 440762 [Multi-domain] Cd Length: 563 Bit Score: 39.46 E-value: 3.38e-03
10 20 30
....*....|....*....|....*....|.
gi 446257331 6 DVAIIGGGVIGSSVAHFLAERGHKVAIVEKQ 36
Cdd:COG1148 142 RALVIGGGIAGMTAALELAEQGYEVYLVEKE 172
|
|
| PanE |
COG1893 |
Ketopantoate reductase [Coenzyme transport and metabolism]; Ketopantoate reductase is part of ... |
7-33 |
3.48e-03 |
|
Ketopantoate reductase [Coenzyme transport and metabolism]; Ketopantoate reductase is part of the Pathway/BioSystem: Pantothenate/CoA biosynthesis
Pssm-ID: 441497 [Multi-domain] Cd Length: 305 Bit Score: 39.07 E-value: 3.48e-03
10 20
....*....|....*....|....*..
gi 446257331 7 VAIIGGGVIGSSVAHFLAERGHKVAIV 33
Cdd:COG1893 3 IAILGAGAIGGLLGARLARAGHDVTLV 29
|
|
| trkA |
PRK09496 |
Trk system potassium transporter TrkA; |
7-45 |
3.71e-03 |
|
Trk system potassium transporter TrkA;
Pssm-ID: 236541 [Multi-domain] Cd Length: 453 Bit Score: 38.95 E-value: 3.71e-03
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 446257331 7 VAIIGGGVIGSSVAHFLAERGHKVAIVEK-----QQIASEASKA 45
Cdd:PRK09496 234 VMIVGGGNIGYYLAKLLEKEGYSVKLIERdperaEELAEELPNT 277
|
|
| PRK11749 |
PRK11749 |
dihydropyrimidine dehydrogenase subunit A; Provisional |
7-35 |
3.81e-03 |
|
dihydropyrimidine dehydrogenase subunit A; Provisional
Pssm-ID: 236967 [Multi-domain] Cd Length: 457 Bit Score: 39.01 E-value: 3.81e-03
10 20
....*....|....*....|....*....
gi 446257331 7 VAIIGGGVIGSSVAHFLAERGHKVAIVEK 35
Cdd:PRK11749 143 VAVIGAGPAGLTAAHRLARKGYDVTIFEA 171
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
1-56 |
3.86e-03 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 39.11 E-value: 3.86e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 446257331 1 MCKKYDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQqiaSEASkaaaglLGVQAEW 56
Cdd:PRK12834 1 MAMDADVIVVGAGLAGLVAAAELADAGKRVLLLDQE---NEAN------LGGQAFW 47
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
3-34 |
3.88e-03 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 39.13 E-value: 3.88e-03
10 20 30
....*....|....*....|....*....|..
gi 446257331 3 KKYDVAIIGGGVIGSSVAHFLAERGHKVAIVE 34
Cdd:COG1231 6 RGKDVVIVGAGLAGLAAARELRKAGLDVTVLE 37
|
|
| PRK08773 |
PRK08773 |
UbiH/UbiF family hydroxylase; |
6-37 |
3.99e-03 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181552 [Multi-domain] Cd Length: 392 Bit Score: 39.08 E-value: 3.99e-03
10 20 30
....*....|....*....|....*....|..
gi 446257331 6 DVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQ 37
Cdd:PRK08773 8 DAVIVGGGVVGAACALALADAGLSVALVEGRE 39
|
|
| PRK07494 |
PRK07494 |
UbiH/UbiF family hydroxylase; |
5-33 |
4.61e-03 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181001 [Multi-domain] Cd Length: 388 Bit Score: 38.73 E-value: 4.61e-03
10 20
....*....|....*....|....*....
gi 446257331 5 YDVAIIGGGVIGSSVAHFLAERGHKVAIV 33
Cdd:PRK07494 8 TDIAVIGGGPAGLAAAIALARAGASVALV 36
|
|
| PRK11445 |
PRK11445 |
FAD-binding protein; |
5-55 |
4.71e-03 |
|
FAD-binding protein;
Pssm-ID: 183139 [Multi-domain] Cd Length: 351 Bit Score: 38.50 E-value: 4.71e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 446257331 5 YDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIASEA-SKAAAGLLGVQAE 55
Cdd:PRK11445 2 YDVAIIGLGPAGSALARLLAGKMKVIAIDKKHQCGTEGfSKPCGGLLAPDAQ 53
|
|
| PRK08013 |
PRK08013 |
oxidoreductase; Provisional |
5-49 |
5.82e-03 |
|
oxidoreductase; Provisional
Pssm-ID: 236139 [Multi-domain] Cd Length: 400 Bit Score: 38.49 E-value: 5.82e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 446257331 5 YDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIASEASKAAAGL 49
Cdd:PRK08013 4 VDVVIAGGGMVGLAVACGLQGSGLRVAVLEQRVPEPLAADAPPAL 48
|
|
| PRK07045 |
PRK07045 |
putative monooxygenase; Reviewed |
6-50 |
6.76e-03 |
|
putative monooxygenase; Reviewed
Pssm-ID: 136171 [Multi-domain] Cd Length: 388 Bit Score: 38.35 E-value: 6.76e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 446257331 6 DVAIIGGGVIGSSVAHFLAERGHKVAIVEkqQIASEASKAAAGLL 50
Cdd:PRK07045 7 DVLINGSGIAGVALAHLLGARGHSVTVVE--RAARNRAQNGADLL 49
|
|
| PTZ00367 |
PTZ00367 |
squalene epoxidase; Provisional |
3-54 |
6.88e-03 |
|
squalene epoxidase; Provisional
Pssm-ID: 240384 [Multi-domain] Cd Length: 567 Bit Score: 38.29 E-value: 6.88e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 446257331 3 KKYDVAIIGGGVIGSSVAHFLAERGHKVAIVEKqQIASEASKAAAGLL---GVQA 54
Cdd:PTZ00367 32 YDYDVIIVGGSIAGPVLAKALSKQGRKVLMLER-DLFSKPDRIVGELLqpgGVNA 85
|
|
| FadB |
COG1250 |
3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]; 3-hydroxyacyl-CoA ... |
7-55 |
7.03e-03 |
|
3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]; 3-hydroxyacyl-CoA dehydrogenase is part of the Pathway/BioSystem: Fatty acid biosynthesis
Pssm-ID: 440862 [Multi-domain] Cd Length: 281 Bit Score: 37.78 E-value: 7.03e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 446257331 7 VAIIGGGVIGSSVAHFLAERGHKVAIVE-KQQIASEASKAAAGLLGVQAE 55
Cdd:COG1250 5 VAVIGAGTMGAGIAAVFANAGYEVVLLDiSPEALERARARIAKLLDKLVK 54
|
|
| COG2085 |
COG2085 |
Predicted dinucleotide-binding enzyme [General function prediction only]; |
7-88 |
7.87e-03 |
|
Predicted dinucleotide-binding enzyme [General function prediction only];
Pssm-ID: 441688 [Multi-domain] Cd Length: 205 Bit Score: 37.07 E-value: 7.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 7 VAIIGGGVIGSSVAHFLAERGHKVAivekqqIAS---EASKAAAGLLGVQAEWDEYDplfDLARESRAIF---------- 73
Cdd:COG2085 1 IGIIGTGNIGSALARRLAAAGHEVV------IGSrdpEKAAALAAELGPGARAGTNA---EAAAAADVVVlavpyeavpd 71
|
90
....*....|....*..
gi 446257331 74 --PQLAEVLREKTGIDI 88
Cdd:COG2085 72 vlESLGDALAGKIVIDA 88
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
4-48 |
8.42e-03 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 37.94 E-value: 8.42e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 446257331 4 KYDVAIIGGGVIGSSVAHFLAERGHKVAIVEKQQIASEASKAAAG 48
Cdd:PRK06452 5 EYDAVVIGGGLAGLMSAHEIASAGFKVAVISKVFPTRSHSAAAEG 49
|
|
| TrmFO |
COG1206 |
Folate-dependent tRNA-U54 methylase TrmFO/GidA [Translation, ribosomal structure and ... |
6-34 |
8.70e-03 |
|
Folate-dependent tRNA-U54 methylase TrmFO/GidA [Translation, ribosomal structure and biogenesis]; Folate-dependent tRNA-U54 methylase TrmFO/GidA is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 440819 Cd Length: 436 Bit Score: 37.73 E-value: 8.70e-03
10 20
....*....|....*....|....*....
gi 446257331 6 DVAIIGGGVIGSSVAHFLAERGHKVAIVE 34
Cdd:COG1206 3 PVTVIGGGLAGSEAAWQLAERGVPVRLYE 31
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
7-34 |
9.10e-03 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 37.68 E-value: 9.10e-03
10 20
....*....|....*....|....*...
gi 446257331 7 VAIIGGGVIGSSVAHFLAERGHKVAIVE 34
Cdd:pfam07992 155 VVVVGGGYIGVELAAALAKLGKEVTLIE 182
|
|
| FabG |
COG1028 |
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family [Lipid transport and ... |
7-88 |
9.86e-03 |
|
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family [Lipid transport and metabolism]; NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family is part of the Pathway/BioSystem: Fatty acid biosynthesis
Pssm-ID: 440651 [Multi-domain] Cd Length: 249 Bit Score: 37.07 E-value: 9.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446257331 7 VAII--GGGVIGSSVAHFLAERGHKVAIVEKQQIASEASKAAAGLLGVQAEWDEydplFDLARES--RAIFpqlAEVLRE 82
Cdd:COG1028 8 VALVtgGSSGIGRAIARALAAEGARVVITDRDAEALEAAAAELRAAGGRALAVA----ADVTDEAavEALV---AAAVAA 80
|
....*.
gi 446257331 83 KTGIDI 88
Cdd:COG1028 81 FGRLDI 86
|
|
| |
