NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|446281181|ref|WP_000359036|]
View 

MULTISPECIES: F0F1 ATP synthase subunit delta [Streptococcus]

Protein Classification

FoF1 ATP synthase subunit delta( domain architecture ID 10012586)

F0F1 ATP synthase subunit delta is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Gene Ontology:  GO:0046933|GO:0015986|GO:0045261
PubMed:  30901262
SCOP:  3000714

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 2-178 1.24e-48

F0F1 ATP synthase subunit delta; Validated


:

Pssm-ID: 235593  Cd Length: 177  Bit Score: 155.33  E-value: 1.24e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181   2 DKKTVKVIEKYSMPFVQLVLEKGEEDRIFSDLTQIKQVVEKTGLPSFLKQVAVDESDKEKTIAFFQDSVSPLLQNFIQVL 81
Cdd:PRK05758   1 MSELSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSLSEYVQNFLKVL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181  82 AYNHRANLFYDVLVDCLNRLEKETNRFEVTITSAHPLTDEQKTRLLPLIEKKMSLKVRsVKEQIDESLIGGFVIFANHKT 161
Cdd:PRK05758  81 AENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRKVK-LNEKVDPSLIGGVIIKVGDRV 159

                        170
                 ....*....|....*..
gi 446281181 162 IDVSIKQQLKVVKENLK 178
Cdd:PRK05758 160 IDGSVRGKLERLKDALK 176
 
Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 2-178 1.24e-48

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 155.33  E-value: 1.24e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181   2 DKKTVKVIEKYSMPFVQLVLEKGEEDRIFSDLTQIKQVVEKTGLPSFLKQVAVDESDKEKTIAFFQDSVSPLLQNFIQVL 81
Cdd:PRK05758   1 MSELSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSLSEYVQNFLKVL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181  82 AYNHRANLFYDVLVDCLNRLEKETNRFEVTITSAHPLTDEQKTRLLPLIEKKMSLKVRsVKEQIDESLIGGFVIFANHKT 161
Cdd:PRK05758  81 AENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRKVK-LNEKVDPSLIGGVIIKVGDRV 159

                        170
                 ....*....|....*..
gi 446281181 162 IDVSIKQQLKVVKENLK 178
Cdd:PRK05758 160 IDGSVRGKLERLKDALK 176
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 8-178 2.43e-33

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 116.41  E-value: 2.43e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181   8 VIEKYSMPFVQLVLEKGEEDRIFSDLTQIKQVVEKT-GLPSFLKQVAVDESDKEKTI-AFFQDSVSPLLQNFIQVLAYNH 85
Cdd:COG0712    6 IARRYAKALFELAKEKGALDEVEEELFALAALLAENpELRALLSSPVISAEEKKELLeALFGGKLSPETLNFLKLLVENG 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181  86 RANLFYDVLVDCLNRLEKETNRFEVTITSAHPLTDEQKTRLLPLIEKKMSLKVRsVKEQIDESLIGGFVIFANHKTIDVS 165
Cdd:COG0712   86 RLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKTGKKVE-LNVKVDPSLIGGVVVRVGDKVIDGS 164

                        170
                 ....*....|...
gi 446281181 166 IKQQLKVVKENLK 178
Cdd:COG0712  165 VRGRLNRLRRALK 177
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 11-177 2.85e-30

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 108.38  E-value: 2.85e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181   11 KYSMPFVQLVLEKGEEDRIFSDLTQIKQVVEKT-GLPSFLKQVAVDESDKEKTI-AFFQDSVSPLLQNFIQVLAYNHRAN 88
Cdd:pfam00213   4 RYAKALFELAKEKGKLDQVEEELEALEAALAENpDLAAFLSNPTISAEEKKALLlELFKGLLSPLTLNFLKLLAENGRLG 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181   89 LFYDVLVDCLNRLEKETNRFEVTITSAHPLTDEQKTRLLPLIEKKMSLKVRSVKEQIDESLIGGFVIFANHKTIDVSIKQ 168
Cdd:pfam00213  84 LLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKKKVKLENKVDPSLIGGVVVRVGDKVIDGSVKG 163


                  ....*....
gi 446281181  169 QLKVVKENL 177
Cdd:pfam00213 164 KLERLKRAL 172
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 18-171 5.83e-15

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 68.88  E-value: 5.83e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181   18 QLVLEKGEEDRIFSDLTQIKQVVEKT-GLPSFLKQVAVDESDKEKTIAF-FQDSVSPLLQNFIQVLAYNHRANLFYDVLV 95
Cdd:TIGR01145  11 EIANEKSSLEEWGEMLNFVKEVLKNNkELKKFLSNPLISAEKKKEFIKNvFGEQLDESSLNLLLLLAENGRLAALPDILD 90

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446281181   96 DCLNRLEKETNRFEVTITSAHPLTDEQKTRLLPLIEKKMSLKVRSVKEQIDESLIGGFVIFANHKTIDVSIKQQLK 171
Cdd:TIGR01145  91 QFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAAKVKLNCKVDKDLIGGVIIRIGDRVIDGSVRGQLK 166
 
Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 2-178 1.24e-48

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 155.33  E-value: 1.24e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181   2 DKKTVKVIEKYSMPFVQLVLEKGEEDRIFSDLTQIKQVVEKTGLPSFLKQVAVDESDKEKTIAFFQDSVSPLLQNFIQVL 81
Cdd:PRK05758   1 MSELSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSLSEYVQNFLKVL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181  82 AYNHRANLFYDVLVDCLNRLEKETNRFEVTITSAHPLTDEQKTRLLPLIEKKMSLKVRsVKEQIDESLIGGFVIFANHKT 161
Cdd:PRK05758  81 AENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRKVK-LNEKVDPSLIGGVIIKVGDRV 159

                        170
                 ....*....|....*..
gi 446281181 162 IDVSIKQQLKVVKENLK 178
Cdd:PRK05758 160 IDGSVRGKLERLKDALK 176
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 8-178 2.43e-33

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 116.41  E-value: 2.43e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181   8 VIEKYSMPFVQLVLEKGEEDRIFSDLTQIKQVVEKT-GLPSFLKQVAVDESDKEKTI-AFFQDSVSPLLQNFIQVLAYNH 85
Cdd:COG0712    6 IARRYAKALFELAKEKGALDEVEEELFALAALLAENpELRALLSSPVISAEEKKELLeALFGGKLSPETLNFLKLLVENG 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181  86 RANLFYDVLVDCLNRLEKETNRFEVTITSAHPLTDEQKTRLLPLIEKKMSLKVRsVKEQIDESLIGGFVIFANHKTIDVS 165
Cdd:COG0712   86 RLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKTGKKVE-LNVKVDPSLIGGVVVRVGDKVIDGS 164

                        170
                 ....*....|...
gi 446281181 166 IKQQLKVVKENLK 178
Cdd:COG0712  165 VRGRLNRLRRALK 177
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 11-177 2.85e-30

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 108.38  E-value: 2.85e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181   11 KYSMPFVQLVLEKGEEDRIFSDLTQIKQVVEKT-GLPSFLKQVAVDESDKEKTI-AFFQDSVSPLLQNFIQVLAYNHRAN 88
Cdd:pfam00213   4 RYAKALFELAKEKGKLDQVEEELEALEAALAENpDLAAFLSNPTISAEEKKALLlELFKGLLSPLTLNFLKLLAENGRLG 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181   89 LFYDVLVDCLNRLEKETNRFEVTITSAHPLTDEQKTRLLPLIEKKMSLKVRSVKEQIDESLIGGFVIFANHKTIDVSIKQ 168
Cdd:pfam00213  84 LLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKKKVKLENKVDPSLIGGVVVRVGDKVIDGSVKG 163


                  ....*....
gi 446281181  169 QLKVVKENL 177
Cdd:pfam00213 164 KLERLKRAL 172
PRK13429 PRK13429
F0F1 ATP synthase subunit delta; Provisional
 12-178 2.64e-21

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237386  Cd Length: 181  Bit Score: 85.64  E-value: 2.64e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181  12 YSMPFVQLVLEKGEEDRIFSDLTQIKQVVEKT-GLPSFLKQVAVDESDKEKTI--AFFQDSVSPLLQNFIQVLAYNHRAN 88
Cdd:PRK13429  10 YAKALFQLAKEKGQLDSVYEELKQLAELLEDSpELRDALSNPVLSAEEKKAVLekLLGKLKVSPEVLNFLKLLADRRRLG 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181  89 LFYDVLVDCLNRLEKETNRFEVTITSAHPLTDEQKTRLLPLIEKKMSLKVRsVKEQIDESLIGGFVIFANHKTIDVSIKQ 168
Cdd:PRK13429  90 ILPEIAARYLELADEQKGIVRATVTSAVPLSEAQQEAIRQKLEKMTGKKVE-LDTAVDPSLIGGVVVKIGDKVLDASVRT 168

                        170
                 ....*....|
gi 446281181 169 QLKVVKENLK 178
Cdd:PRK13429 169 QLRRLKETLK 178
atpD CHL00119
ATP synthase CF1 delta subunit; Validated
 4-171 1.72e-15

ATP synthase CF1 delta subunit; Validated


Pssm-ID: 177042  Cd Length: 184  Bit Score: 70.40  E-value: 1.72e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181   4 KTVKVIEKYSMPFVQLVLEKGEEDRIFSDLTQIKQVV-EKTGLPSFLKQVAVDESDKEKTI-AFFQDSVSPLLQNFIQVL 81
Cdd:CHL00119   4 LVSKIAQPYAEALLEFAKEKNIMEQITADIQLILTFLnESPELKKFLANPLISKNAKKEVIkKTFGSQINENTLKFLMVL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181  82 AYNHRANLFYDVLVDCLNRLEKETNRFEVTITSAHPLTDEQKTRLLPLIEKKMSLKVRSVKEQIDESLIGGFVIFANHKT 161
Cdd:CHL00119  84 VDRGRIALLDAIIEKYLELVYKLASIKIAEVSTAVPLSSAQEEALIEKLKEMTNAKEIKLVITVDPSLIGGFLIKIGSKV 163

                        170
                 ....*....|
gi 446281181 162 IDVSIKQQLK 171
Cdd:CHL00119 164 IDTSIKGQLK 173
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 18-171 5.83e-15

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 68.88  E-value: 5.83e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181   18 QLVLEKGEEDRIFSDLTQIKQVVEKT-GLPSFLKQVAVDESDKEKTIAF-FQDSVSPLLQNFIQVLAYNHRANLFYDVLV 95
Cdd:TIGR01145  11 EIANEKSSLEEWGEMLNFVKEVLKNNkELKKFLSNPLISAEKKKEFIKNvFGEQLDESSLNLLLLLAENGRLAALPDILD 90

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446281181   96 DCLNRLEKETNRFEVTITSAHPLTDEQKTRLLPLIEKKMSLKVRSVKEQIDESLIGGFVIFANHKTIDVSIKQQLK 171
Cdd:TIGR01145  91 QFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAAKVKLNCKVDKDLIGGVIIRIGDRVIDGSVRGQLK 166
PRK13434 PRK13434
F0F1 ATP synthase subunit delta; Provisional
 20-177 8.00e-10

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 139571  Cd Length: 184  Bit Score: 55.32  E-value: 8.00e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181  20 VLEKGEEDriFSDLTQIKQVVEKtgLPSFLKQVAVDESDKEKTIA-FFQDSVSPLLQNFIQVLAYNHRANLFYDVLVDCL 98
Cdd:PRK13434  20 SPEEVEQE--LGDLVQLLFKDEK--IRNFFLSPTVSPEEKEQTLAkNLRGKISDITLNFLGVLLNKGRFIYLPEIQKDFT 95

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446281181  99 NRLEKETNRFEVTITSAHPLTDEQKTRLLPLIEKKMSLKVRsVKEQIDESLIGGFVIFANHKTIDVSIKQQLKVVKENL 177
Cdd:PRK13434  96 VELDKKKGRVRAQIVSYPSLEPAQVDKLGSILSEKFKSEFI-LEVSEDKNLLGGFVVQFNDLKIEKSIASQLGEIKKAM 173
PRK13436 PRK13436
F0F1 ATP synthase subunit delta; Provisional
 7-178 3.64e-06

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184053  Cd Length: 179  Bit Score: 45.04  E-value: 3.64e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181   7 KVIEKYSMPFVQLVLEKGEEDRIFSDLTQIKQVV-EKTGLPSFLKQVAVDESDKEKTI-AFFQDSVSPLLQNFIQVLAYN 84
Cdd:PRK13436   6 KNIYNYAEALFDIANEENNVEKYINEVFKIIEILkNNKDLIKLLTSYFIDKEEKFKIIdKIFSAKIDIYLVNFLKILAKN 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181  85 HRANLFYDVLVDCLNRLEKETNRFEVTITSAHPLTDEQKTRLLPLIEKKMSLKVRSVKEqIDESLIGGFVIFANHKTIDV 164
Cdd:PRK13436  86 NLFIYIKQILKKFVKLSNEKLNITYGEIYTTEPLSEVQISRFESKLSKKLNKKVHLVNK-IDPKLIAGIKIKVDNKVFEN 164

                        170
                 ....*....|....
gi 446281181 165 SIKQQLKVVKENLK 178
Cdd:PRK13436 165 SIKSKLKELKKQVL 178
PRK13441 PRK13441
F0F1 ATP synthase subunit delta; Provisional
 66-178 1.17e-05

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184054  Cd Length: 180  Bit Score: 43.59  E-value: 1.17e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181  66 FQDSVSPLLQNFIQVLAYNHRANLFYDVLVDCLNRLEKETNRFEVTITSAHPLTDEQKTRLLPLIEKkMSLKVRSVKEQI 145
Cdd:PRK13441  66 FGQEMDEFFENFLNLVFENKRQKLLPQIRALFEYEKILSEQKVPVNLTTAHELSDEELKLLRKFVRK-YVLRDPVFEETI 144

                         90       100       110
                 ....*....|....*....|....*....|....
gi 446281181 146 DESLIGGFVIFANHKTIDVSIKQQL-KVVKENLK 178
Cdd:PRK13441 145 DESLIAGAVVEFEGKRLDVTVQGRLkKIAREVLK 178
PRK13430 PRK13430
F0F1 ATP synthase subunit delta; Provisional
 110-178 1.30e-05

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237387 [Multi-domain]  Cd Length: 271  Bit Score: 44.17  E-value: 1.30e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446281181 110 VTITSAHPLTDEQKTRLLPLIEKKMSLKVrSVKEQIDESLIGGFVIFANHKTIDVSIKQQLKVVKENLK 178
Cdd:PRK13430 203 ATVTTAVPLSDEQKQRLAAALSRIYGRPV-HLNSEVDPSVLGGMRVQVGDEVIDGSVAGRLERLRRRLA 270
PRK13428 PRK13428
F0F1 ATP synthase subunit delta; Provisional
 112-177 9.81e-05

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184048 [Multi-domain]  Cd Length: 445  Bit Score: 41.64  E-value: 9.81e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446281181 112 ITSAHPLTDEQKTRLLPLIEKKMSLKVrSVKEQIDESLIGGFVIFANHKTIDVSIKQQLKVVKENL 177
Cdd:PRK13428 379 VSAAAELSDAQRTRLTEVLSRIYGRPV-SVQLHIDPELLGGLSIAVGDEVIDGTLSSRLAAAEAQL 443
PRK08474 PRK08474
F0F1 ATP synthase subunit delta; Validated
 16-138 6.21e-03

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 236271  Cd Length: 176  Bit Score: 35.72  E-value: 6.21e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446281181  16 FVQLVLEKGEEDRIFSDLTQIKQVVEKTGLPSF---LKQVAVDESDKEKTIAFFQDSVSPLLQNFIQVLAYNHRANLFYD 92
Cdd:PRK08474   9 YAKALLSSLSSDELNDIYSNLKILSSAFADEKFkeiISSPEISKEQKIEFLLSFVDNANAKFQNFIKLLAENKRLELIPA 88

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 446281181  93 VLVDCLNRLEKETNRFEVTITSAHPLTDEQktrlLPLIEKKMSLKV 138
Cdd:PRK08474  89 IAKELERQIALKENEYVGVVYSNEKLSEET----LKKLEEKLSKKF 130
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH