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Conserved domains on  [gi|446298863|ref|WP_000376718|]
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MULTISPECIES: DUF4752 family protein [Enterobacteriaceae]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4752 super family cl24497
Domain of unknown function (DUF4752); This family of proteins is found in bacteria and viruses. ...
 8-91 1.08e-35

Domain of unknown function (DUF4752); This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 90 and 105 amino acids in length. There is a conserved GLA sequence motif.


The actual alignment was detected with superfamily member pfam15944:

Pssm-ID: 339554  Cd Length: 84  Bit Score: 116.00  E-value: 1.08e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446298863   8 TIIDWMASLQVLLIWFYMAYRSGQWIVSVACgKGWRWWNRKNKKALALDSFYEAFNLNSLQPGSVIVVTTQSGMTIQIHK 87
Cdd:pfam15944  2 TIDTALNTGLALLGWFYIMFRSGRWLTSVAL-KQWEKRRKQSRRQKALNAFYDAFDLDSIEPGSTARVATKGDLTILIYR 80


                 ....
gi 446298863  88 PKEE 91
Cdd:pfam15944 81 QEEE 84
 
Name Accession Description Interval E-value
DUF4752 pfam15944
Domain of unknown function (DUF4752); This family of proteins is found in bacteria and viruses. ...
 8-91 1.08e-35

Domain of unknown function (DUF4752); This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 90 and 105 amino acids in length. There is a conserved GLA sequence motif.


Pssm-ID: 339554  Cd Length: 84  Bit Score: 116.00  E-value: 1.08e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446298863   8 TIIDWMASLQVLLIWFYMAYRSGQWIVSVACgKGWRWWNRKNKKALALDSFYEAFNLNSLQPGSVIVVTTQSGMTIQIHK 87
Cdd:pfam15944  2 TIDTALNTGLALLGWFYIMFRSGRWLTSVAL-KQWEKRRKQSRRQKALNAFYDAFDLDSIEPGSTARVATKGDLTILIYR 80


                 ....
gi 446298863  88 PKEE 91
Cdd:pfam15944 81 QEEE 84
 
Name Accession Description Interval E-value
DUF4752 pfam15944
Domain of unknown function (DUF4752); This family of proteins is found in bacteria and viruses. ...
 8-91 1.08e-35

Domain of unknown function (DUF4752); This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 90 and 105 amino acids in length. There is a conserved GLA sequence motif.


Pssm-ID: 339554  Cd Length: 84  Bit Score: 116.00  E-value: 1.08e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446298863   8 TIIDWMASLQVLLIWFYMAYRSGQWIVSVACgKGWRWWNRKNKKALALDSFYEAFNLNSLQPGSVIVVTTQSGMTIQIHK 87
Cdd:pfam15944  2 TIDTALNTGLALLGWFYIMFRSGRWLTSVAL-KQWEKRRKQSRRQKALNAFYDAFDLDSIEPGSTARVATKGDLTILIYR 80


                 ....
gi 446298863  88 PKEE 91
Cdd:pfam15944 81 QEEE 84
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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