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Conserved domains on  [gi|446303162|ref|WP_000381017|]
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MULTISPECIES: YeaC family protein [Vibrio]

Protein Classification

YeaC family protein( domain architecture ID 10006958)

YeaC family protein similar to Escherichia coli protein YeaC

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
yeaC COG3139
Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown];
1-92 2.27e-50

Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown];


:

Pssm-ID: 442373  Cd Length: 92  Bit Score: 153.51  E-value: 2.27e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446303162  1 MDTQQLINAITPEAYQRLLYAVETGKWPEGTPLSQQQRDSCMQAVMLYQSKHNTQADHMSVGVGGEVVFKSKAELKKRFS 80
Cdd:COG3139   1 MNFEQLIASMTPEIYERLKTAVELGKWPDGRALTEEQRELCLQAVMLYQARHNPEEQHMGIGPRGEIVCKSKQELKQQFG 80

                        90
                ....*....|..
gi 446303162 81 EGEEDILRVNPN 92
Cdd:COG3139  81 DEEEPIARIKPD 92
 
Name Accession Description Interval E-value
yeaC COG3139
Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown];
1-92 2.27e-50

Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown];


Pssm-ID: 442373  Cd Length: 92  Bit Score: 153.51  E-value: 2.27e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446303162  1 MDTQQLINAITPEAYQRLLYAVETGKWPEGTPLSQQQRDSCMQAVMLYQSKHNTQADHMSVGVGGEVVFKSKAELKKRFS 80
Cdd:COG3139   1 MNFEQLIASMTPEIYERLKTAVELGKWPDGRALTEEQRELCLQAVMLYQARHNPEEQHMGIGPRGEIVCKSKQELKQQFG 80

                        90
                ....*....|..
gi 446303162 81 EGEEDILRVNPN 92
Cdd:COG3139  81 DEEEPIARIKPD 92
DUF1315 pfam07023
Protein of unknown function (DUF1315); This family consists of several bacterial proteins of ...
 4-83 5.46e-31

Protein of unknown function (DUF1315); This family consists of several bacterial proteins of around 90 residues in length. The function of this family is unknown.


Pssm-ID: 429252  Cd Length: 82  Bit Score: 104.15  E-value: 5.46e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446303162   4 QQLINAITPEAYQRLLYAVETGKWPEGTPLSQQQRDSCMQAVMLYQSKHNTQADHMsvgvgGEVVFKSKA--ELKKRFSE 81
Cdd:pfam07023  1 QQLLASMTPDVYQRLKRAVEIGKWPDGSRLTEEQRDLCMQAVMAYEAKHLPEDEHM-----GYIPRKSKEgnELKQHEDH 75


                 ..
gi 446303162  82 GE 83
Cdd:pfam07023 76 NS 77
 
Name Accession Description Interval E-value
yeaC COG3139
Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown];
1-92 2.27e-50

Uncharacterized conserved protein YeaC, DUF1315 family [Function unknown];


Pssm-ID: 442373  Cd Length: 92  Bit Score: 153.51  E-value: 2.27e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446303162  1 MDTQQLINAITPEAYQRLLYAVETGKWPEGTPLSQQQRDSCMQAVMLYQSKHNTQADHMSVGVGGEVVFKSKAELKKRFS 80
Cdd:COG3139   1 MNFEQLIASMTPEIYERLKTAVELGKWPDGRALTEEQRELCLQAVMLYQARHNPEEQHMGIGPRGEIVCKSKQELKQQFG 80

                        90
                ....*....|..
gi 446303162 81 EGEEDILRVNPN 92
Cdd:COG3139  81 DEEEPIARIKPD 92
DUF1315 pfam07023
Protein of unknown function (DUF1315); This family consists of several bacterial proteins of ...
 4-83 5.46e-31

Protein of unknown function (DUF1315); This family consists of several bacterial proteins of around 90 residues in length. The function of this family is unknown.


Pssm-ID: 429252  Cd Length: 82  Bit Score: 104.15  E-value: 5.46e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446303162   4 QQLINAITPEAYQRLLYAVETGKWPEGTPLSQQQRDSCMQAVMLYQSKHNTQADHMsvgvgGEVVFKSKA--ELKKRFSE 81
Cdd:pfam07023  1 QQLLASMTPDVYQRLKRAVEIGKWPDGSRLTEEQRDLCMQAVMAYEAKHLPEDEHM-----GYIPRKSKEgnELKQHEDH 75


                 ..
gi 446303162  82 GE 83
Cdd:pfam07023 76 NS 77
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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