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Conserved domains on  [gi|446315483|ref|WP_000393338|]
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MULTISPECIES: YvrJ family protein [Bacillus]

Protein Classification

YvrJ family protein( domain architecture ID 10582295)

YvrJ family protein similar to Bacillus subtilis uncharacterized protein YvrJ that is positively regulated by SigO and its coactivator RsoA

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YvrJ pfam12841
YvrJ protein family; This family of short proteins are related to B. subtilis YvrJ protein. ...
 7-41 5.37e-12

YvrJ protein family; This family of short proteins are related to B. subtilis YvrJ protein. None of the members of this family have been functionally characterized.


:

Pssm-ID: 463725  Cd Length: 35  Bit Score: 53.17  E-value: 5.37e-12
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 446315483   7 MIGNVGFPIVVTLYLLHRIESKLEGVIVAIEKLPR 41
Cdd:pfam12841  1 LIGNVGFPIAVAIYLLVRIEGKLDELTKSITELSE 35
 
Name Accession Description Interval E-value
YvrJ pfam12841
YvrJ protein family; This family of short proteins are related to B. subtilis YvrJ protein. ...
 7-41 5.37e-12

YvrJ protein family; This family of short proteins are related to B. subtilis YvrJ protein. None of the members of this family have been functionally characterized.


Pssm-ID: 463725  Cd Length: 35  Bit Score: 53.17  E-value: 5.37e-12
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 446315483   7 MIGNVGFPIVVTLYLLHRIESKLEGVIVAIEKLPR 41
Cdd:pfam12841  1 LIGNVGFPIAVAIYLLVRIEGKLDELTKSITELSE 35
 
Name Accession Description Interval E-value
YvrJ pfam12841
YvrJ protein family; This family of short proteins are related to B. subtilis YvrJ protein. ...
 7-41 5.37e-12

YvrJ protein family; This family of short proteins are related to B. subtilis YvrJ protein. None of the members of this family have been functionally characterized.


Pssm-ID: 463725  Cd Length: 35  Bit Score: 53.17  E-value: 5.37e-12
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 446315483   7 MIGNVGFPIVVTLYLLHRIESKLEGVIVAIEKLPR 41
Cdd:pfam12841  1 LIGNVGFPIAVAIYLLVRIEGKLDELTKSITELSE 35
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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