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Conserved domains on  [gi|446323117|ref|WP_000400972|]
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MULTISPECIES: YmzC family protein [Bacillus]

Protein Classification

YmzC family protein( domain architecture ID 10624443)

YmzC family protein similar to Bacillus subtilis uncharacterized protein YmzC

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YmzC pfam14157
YmzC-like protein; The YmzC-like protein family includes the B. subtilis YmzC protein, which ...
 28-87 7.19e-22

YmzC-like protein; The YmzC-like protein family includes the B. subtilis YmzC protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 91 amino acids in length. There is a conserved ELR sequence motif.


:

Pssm-ID: 404945  Cd Length: 58  Bit Score: 80.39  E-value: 7.19e-22
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 446323117  28 REKTVEITDHGSEPIVNTSNMTQVGDNTFAYKDesNQIKIFKFNPDTNEIKLIKEFYANE 87
Cdd:pfam14157  1 NQDPVEITDHGDNEMLNTSNMTLVGNHFFVYKD--NQIKIYKFDEDTNEIKLIKEFYADE 58
 
Name Accession Description Interval E-value
YmzC pfam14157
YmzC-like protein; The YmzC-like protein family includes the B. subtilis YmzC protein, which ...
 28-87 7.19e-22

YmzC-like protein; The YmzC-like protein family includes the B. subtilis YmzC protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 91 amino acids in length. There is a conserved ELR sequence motif.


Pssm-ID: 404945  Cd Length: 58  Bit Score: 80.39  E-value: 7.19e-22
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 446323117  28 REKTVEITDHGSEPIVNTSNMTQVGDNTFAYKDesNQIKIFKFNPDTNEIKLIKEFYANE 87
Cdd:pfam14157  1 NQDPVEITDHGDNEMLNTSNMTLVGNHFFVYKD--NQIKIYKFDEDTNEIKLIKEFYADE 58
 
Name Accession Description Interval E-value
YmzC pfam14157
YmzC-like protein; The YmzC-like protein family includes the B. subtilis YmzC protein, which ...
 28-87 7.19e-22

YmzC-like protein; The YmzC-like protein family includes the B. subtilis YmzC protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 91 amino acids in length. There is a conserved ELR sequence motif.


Pssm-ID: 404945  Cd Length: 58  Bit Score: 80.39  E-value: 7.19e-22
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 446323117  28 REKTVEITDHGSEPIVNTSNMTQVGDNTFAYKDesNQIKIFKFNPDTNEIKLIKEFYANE 87
Cdd:pfam14157  1 NQDPVEITDHGDNEMLNTSNMTLVGNHFFVYKD--NQIKIYKFDEDTNEIKLIKEFYADE 58
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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