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Conserved domains on  [gi|446335275|ref|WP_000413130|]
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MULTISPECIES: DUF6773 family protein [Bacillus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF6773 super family cl48715
Family of unknown function (DUF6773); This family of proteins is functionally uncharacterized. ...
 15-156 7.46e-03

Family of unknown function (DUF6773); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 151 and 172 amino acids in length. This family has a conserved sequence motif DER and two conserved residues, a Tyr and a Gly.


The actual alignment was detected with superfamily member pfam20563:

Pssm-ID: 466712  Cd Length: 162  Bit Score: 34.88  E-value: 7.46e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446335275   15 DERIQQVEMKIWAQSGIIVLLIAFVDFVIRGAYLHRPFLEWAASLAIIICYMIFVFIKSILTGVYETDINNKEQLKEKLK 94
Cdd:pfam20563   7 DERIVNLKNKIYSEAYILVMIILLLSIIVKSFFFGASLEQYATELIILIVSGLYYSIRSVMLGDEVELHDRNSKKSYSKK 86

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446335275   95 EKMNNTFIFCFVAIG-----ATTYKYNLPEDFVGWLSVIA-RFIILFAFLFGIQYLITVLAWKKSNKI 156
Cdd:pfam20563  87 NLIGGLAIGLVLALFfgirsAILYGDGYGDFIGYFLLVFFvSFIIYIPFFFVVLVILYYLAKKKSKKI 154
 
Name Accession Description Interval E-value
DUF6773 pfam20563
Family of unknown function (DUF6773); This family of proteins is functionally uncharacterized. ...
 15-156 7.46e-03

Family of unknown function (DUF6773); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 151 and 172 amino acids in length. This family has a conserved sequence motif DER and two conserved residues, a Tyr and a Gly.


Pssm-ID: 466712  Cd Length: 162  Bit Score: 34.88  E-value: 7.46e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446335275   15 DERIQQVEMKIWAQSGIIVLLIAFVDFVIRGAYLHRPFLEWAASLAIIICYMIFVFIKSILTGVYETDINNKEQLKEKLK 94
Cdd:pfam20563   7 DERIVNLKNKIYSEAYILVMIILLLSIIVKSFFFGASLEQYATELIILIVSGLYYSIRSVMLGDEVELHDRNSKKSYSKK 86

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446335275   95 EKMNNTFIFCFVAIG-----ATTYKYNLPEDFVGWLSVIA-RFIILFAFLFGIQYLITVLAWKKSNKI 156
Cdd:pfam20563  87 NLIGGLAIGLVLALFfgirsAILYGDGYGDFIGYFLLVFFvSFIIYIPFFFVVLVILYYLAKKKSKKI 154
 
Name Accession Description Interval E-value
DUF6773 pfam20563
Family of unknown function (DUF6773); This family of proteins is functionally uncharacterized. ...
 15-156 7.46e-03

Family of unknown function (DUF6773); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 151 and 172 amino acids in length. This family has a conserved sequence motif DER and two conserved residues, a Tyr and a Gly.


Pssm-ID: 466712  Cd Length: 162  Bit Score: 34.88  E-value: 7.46e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446335275   15 DERIQQVEMKIWAQSGIIVLLIAFVDFVIRGAYLHRPFLEWAASLAIIICYMIFVFIKSILTGVYETDINNKEQLKEKLK 94
Cdd:pfam20563   7 DERIVNLKNKIYSEAYILVMIILLLSIIVKSFFFGASLEQYATELIILIVSGLYYSIRSVMLGDEVELHDRNSKKSYSKK 86

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446335275   95 EKMNNTFIFCFVAIG-----ATTYKYNLPEDFVGWLSVIA-RFIILFAFLFGIQYLITVLAWKKSNKI 156
Cdd:pfam20563  87 NLIGGLAIGLVLALFfgirsAILYGDGYGDFIGYFLLVFFvSFIIYIPFFFVVLVILYYLAKKKSKKI 154
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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