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Conserved domains on  [gi|446337600|ref|WP_000415455|]
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MULTISPECIES: ribosylpyrimidine nucleosidase [Enterobacteriaceae]

Protein Classification

ribosylpyrimidine nucleosidase( domain architecture ID 10793328)

ribosylpyrimidine nucleosidase hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively

CATH:  3.90.245.10
EC:  3.2.2.8
Gene Ontology:  GO:0050263|GO:0046133
PubMed:  18361502
SCOP:  4000751

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
rihB PRK09955
ribosylpyrimidine nucleosidase;
1-313 0e+00

ribosylpyrimidine nucleosidase;


:

Pssm-ID: 182166 [Multi-domain]  Cd Length: 313  Bit Score: 670.12  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   1 MEKRKIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEINVPVYAGMPQPIMRQQIVADN 80
Cdd:PRK09955   1 MEKRKIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEINVPVYAGMPQPIMRQQIVADN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  81 IHGETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFT 160
Cdd:PRK09955  81 IHGETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 161 PSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHD 240
Cdd:PRK09955 161 PSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHD 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446337600 241 ATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGYIKTH 313
Cdd:PRK09955 241 ATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGYIKTH 313
 
Name Accession Description Interval E-value
rihB PRK09955
ribosylpyrimidine nucleosidase;
1-313 0e+00

ribosylpyrimidine nucleosidase;


Pssm-ID: 182166 [Multi-domain]  Cd Length: 313  Bit Score: 670.12  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   1 MEKRKIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEINVPVYAGMPQPIMRQQIVADN 80
Cdd:PRK09955   1 MEKRKIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEINVPVYAGMPQPIMRQQIVADN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  81 IHGETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFT 160
Cdd:PRK09955  81 IHGETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 161 PSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHD 240
Cdd:PRK09955 161 PSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHD 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446337600 241 ATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGYIKTH 313
Cdd:PRK09955 241 ATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGYIKTH 313
nuc_hydro_IU_UC_XIUA cd02651
nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, ...
5-306 5.14e-157

nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains proteins similar to nucleoside hydrolases which hydrolyze both pyrimidine and purine ribonucleosides: the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the inosine-uridine-xanthosine preferring nucleoside hydrolase RihC from Escherichia coli and the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium. This group also contains proteins similar to the pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases URH1 from Saccharomyces cerevisiae, E. coli RihA and E. coli RihB. E. coli RihA is equally efficient with uridine and cytidine, E. coli RihB prefers cytidine over uridine. S. cerevisiae URH1 prefers uridine over cytidine.


Pssm-ID: 239117 [Multi-domain]  Cd Length: 302  Bit Score: 440.44  E-value: 5.14e-157
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   5 KIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEI-NVPVYAGMPQPIMRQQIVADNIHG 83
Cdd:cd02651    1 PIIIDCDPGHDDAVAILLALFHPELDLLGITTVAGNVPLEKTTRNALKLLTLLGRtDVPVAAGAARPLVRPLITASDIHG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  84 ETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSA 163
Cdd:cd02651   81 ESGLDGADLPPPPRRPEDIHAVDAIIDTLRASPEPITLVATGPLTNIALLLRKYPELAERIKEIVLMGGALGRGNITPAA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 164 EFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTqFENYGLAGGPVHDATC 243
Cdd:cd02651  161 EFNIFVDPEAAKIVFNSGIPITMVPLDVTHKALATPEVIERIRALGNPVGKMLAELLDFFAET-YGSAFTEGPPLHDPCA 239
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446337600 244 IGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECV 306
Cdd:cd02651  240 VAYLLDPELFTTKRANVDVETEGELTRGRTVVDLRGVTGRPANAQVAVDVDVEKFWDLLLEAL 302
URH1 COG1957
Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]; ...
2-309 4.48e-144

Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]; Inosine-uridine nucleoside N-ribohydrolase is part of the Pathway/BioSystem: Pyrimidine salvage


Pssm-ID: 441560 [Multi-domain]  Cd Length: 310  Bit Score: 408.00  E-value: 4.48e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   2 EKRKIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEI-NVPVYAGMPQPIMRQQIVADN 80
Cdd:COG1957    1 MMRKVIIDTDPGIDDALALLLALASPEIDLLGITTVAGNVPLEQTTRNALKLLELAGRtDVPVAAGAARPLVRPLVTAEH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  81 IHGETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAY-GTGNF 159
Cdd:COG1957   81 VHGEDGLGGVDLPEPTRPPEPEHAVDFIIETLRAAPGEVTLVALGPLTNLALALRKDPELAERIKRIVIMGGAFfVPGNV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 160 TPSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVH 239
Cdd:COG1957  161 TPVAEFNIYVDPEAAKIVFASGIPITMVGLDVTHQALLTPEDLARLAALGTPLGRFLADLLDFYLDFYRERYGLDGCPLH 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 240 DATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGY 309
Cdd:COG1957  241 DPLAVAYLLDPELFTTRPAPVDVETDGELTRGQTVVDWRGVTGRPPNARVALDVDAERFLDLLLERLARL 310
IU_nuc_hydro pfam01156
Inosine-uridine preferring nucleoside hydrolase;
6-299 2.26e-103

Inosine-uridine preferring nucleoside hydrolase;


Pssm-ID: 460086 [Multi-domain]  Cd Length: 253  Bit Score: 302.59  E-value: 2.26e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600    6 IILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEIN-VPVYAGmpqpimrqqivadnihge 84
Cdd:pfam01156   1 VIIDTDPGIDDALALLLALASPEIELLGITTVAGNVSLEQTTRNALRLLELGGRDdIPVYAG------------------ 62
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   85 tgldgpvfepltrqaesthavkyiiDTLMASdGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGT-GNFTPSA 163
Cdd:pfam01156  63 -------------------------EAIREP-GEVTLVATGPLTNLALALRLDPELAKKIKELVIMGGAFGVrGNVTPAA 116
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  164 EFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHDATC 243
Cdd:pfam01156 117 EFNIFVDPEAAKIVFTSGLPITMVPLDVTHQALLTPEDLERLAALGTPLGRFLADLLRFYAEFYRERFGIDGPPLHDPLA 196
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 446337600  244 IGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFW 299
Cdd:pfam01156 197 VAVALDPELFTTRRLNVDVETTGGLTRGQTVVDDRGGWGKPPNVRVATDVDVDRFW 252
 
Name Accession Description Interval E-value
rihB PRK09955
ribosylpyrimidine nucleosidase;
1-313 0e+00

ribosylpyrimidine nucleosidase;


Pssm-ID: 182166 [Multi-domain]  Cd Length: 313  Bit Score: 670.12  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   1 MEKRKIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEINVPVYAGMPQPIMRQQIVADN 80
Cdd:PRK09955   1 MEKRKIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEINVPVYAGMPQPIMRQQIVADN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  81 IHGETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFT 160
Cdd:PRK09955  81 IHGETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 161 PSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHD 240
Cdd:PRK09955 161 PSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHD 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446337600 241 ATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGYIKTH 313
Cdd:PRK09955 241 ATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGYIKTH 313
nuc_hydro_IU_UC_XIUA cd02651
nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, ...
5-306 5.14e-157

nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains proteins similar to nucleoside hydrolases which hydrolyze both pyrimidine and purine ribonucleosides: the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the inosine-uridine-xanthosine preferring nucleoside hydrolase RihC from Escherichia coli and the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium. This group also contains proteins similar to the pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases URH1 from Saccharomyces cerevisiae, E. coli RihA and E. coli RihB. E. coli RihA is equally efficient with uridine and cytidine, E. coli RihB prefers cytidine over uridine. S. cerevisiae URH1 prefers uridine over cytidine.


Pssm-ID: 239117 [Multi-domain]  Cd Length: 302  Bit Score: 440.44  E-value: 5.14e-157
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   5 KIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEI-NVPVYAGMPQPIMRQQIVADNIHG 83
Cdd:cd02651    1 PIIIDCDPGHDDAVAILLALFHPELDLLGITTVAGNVPLEKTTRNALKLLTLLGRtDVPVAAGAARPLVRPLITASDIHG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  84 ETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSA 163
Cdd:cd02651   81 ESGLDGADLPPPPRRPEDIHAVDAIIDTLRASPEPITLVATGPLTNIALLLRKYPELAERIKEIVLMGGALGRGNITPAA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 164 EFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTqFENYGLAGGPVHDATC 243
Cdd:cd02651  161 EFNIFVDPEAAKIVFNSGIPITMVPLDVTHKALATPEVIERIRALGNPVGKMLAELLDFFAET-YGSAFTEGPPLHDPCA 239
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446337600 244 IGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECV 306
Cdd:cd02651  240 VAYLLDPELFTTKRANVDVETEGELTRGRTVVDLRGVTGRPANAQVAVDVDVEKFWDLLLEAL 302
URH1 COG1957
Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]; ...
2-309 4.48e-144

Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]; Inosine-uridine nucleoside N-ribohydrolase is part of the Pathway/BioSystem: Pyrimidine salvage


Pssm-ID: 441560 [Multi-domain]  Cd Length: 310  Bit Score: 408.00  E-value: 4.48e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   2 EKRKIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEI-NVPVYAGMPQPIMRQQIVADN 80
Cdd:COG1957    1 MMRKVIIDTDPGIDDALALLLALASPEIDLLGITTVAGNVPLEQTTRNALKLLELAGRtDVPVAAGAARPLVRPLVTAEH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  81 IHGETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAY-GTGNF 159
Cdd:COG1957   81 VHGEDGLGGVDLPEPTRPPEPEHAVDFIIETLRAAPGEVTLVALGPLTNLALALRKDPELAERIKRIVIMGGAFfVPGNV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 160 TPSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVH 239
Cdd:COG1957  161 TPVAEFNIYVDPEAAKIVFASGIPITMVGLDVTHQALLTPEDLARLAALGTPLGRFLADLLDFYLDFYRERYGLDGCPLH 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 240 DATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGY 309
Cdd:COG1957  241 DPLAVAYLLDPELFTTRPAPVDVETDGELTRGQTVVDWRGVTGRPPNARVALDVDAERFLDLLLERLARL 310
IU_nuc_hydro pfam01156
Inosine-uridine preferring nucleoside hydrolase;
6-299 2.26e-103

Inosine-uridine preferring nucleoside hydrolase;


Pssm-ID: 460086 [Multi-domain]  Cd Length: 253  Bit Score: 302.59  E-value: 2.26e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600    6 IILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEIN-VPVYAGmpqpimrqqivadnihge 84
Cdd:pfam01156   1 VIIDTDPGIDDALALLLALASPEIELLGITTVAGNVSLEQTTRNALRLLELGGRDdIPVYAG------------------ 62
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   85 tgldgpvfepltrqaesthavkyiiDTLMASdGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGT-GNFTPSA 163
Cdd:pfam01156  63 -------------------------EAIREP-GEVTLVATGPLTNLALALRLDPELAKKIKELVIMGGAFGVrGNVTPAA 116
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  164 EFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHDATC 243
Cdd:pfam01156 117 EFNIFVDPEAAKIVFTSGLPITMVPLDVTHQALLTPEDLERLAALGTPLGRFLADLLRFYAEFYRERFGIDGPPLHDPLA 196
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 446337600  244 IGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFW 299
Cdd:pfam01156 197 VAVALDPELFTTRRLNVDVETTGGLTRGQTVVDDRGGWGKPPNVRVATDVDVDRFW 252
rihA PRK10443
ribonucleoside hydrolase 1; Provisional
4-309 4.94e-100

ribonucleoside hydrolase 1; Provisional


Pssm-ID: 182465 [Multi-domain]  Cd Length: 311  Bit Score: 296.58  E-value: 4.94e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   4 RKIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLE-INVPVYAGMPQPIMRQQIVADNIH 82
Cdd:PRK10443   3 LPIILDCDPGHDDAIALVLALASPELDVKAVTTSAGNQTPEKTLRNALRMLTLLNrTDIPVAGGAVKPLMRELIIADNVH 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  83 GETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPS 162
Cdd:PRK10443  83 GESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEPVTLVSTGPQTNVALLLASHPELHSKIARIVIMGGAMGLGNWTPA 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 163 AEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKT-QFENYGLAGGPVHDA 241
Cdd:PRK10443 163 AEFNIYVDPEAAEIVFQSGIPIVMAGLDVTHKAQIMDEDIERIRAIGNPVATIVAELLDFFMEYhKDEKWGFVGAPLHDP 242
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446337600 242 TCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGY 309
Cdd:PRK10443 243 CTIAWLLKPELFTTVERWVGVETQGEYTQGMTVVDYYQLTGNKPNATVLVDVDRQGFVDLLAERLKFY 310
PRK10768 PRK10768
ribonucleoside hydrolase RihC; Provisional
3-298 2.48e-97

ribonucleoside hydrolase RihC; Provisional


Pssm-ID: 182713 [Multi-domain]  Cd Length: 304  Bit Score: 289.12  E-value: 2.48e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   3 KRKIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEINVPVYAGMPQPIMRQQIVADNIH 82
Cdd:PRK10768   2 RLPIILDTDPGIDDAVAIAAALFAPELDLKLITTVAGNVSVEKTTRNALKLLHFFNSDVPVAQGAAKPLVRPLRDAASVH 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  83 GETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPS 162
Cdd:PRK10768  82 GESGMEGYDFPEHTRKPLSIPAVEAMRDALMNAPEPVTLVAIGPLTNIALLLSTYPEVKPYIKRIVLMGGSAGRGNVTPN 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 163 AEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMeRAGGPAGELFSDIMNFTLKTQFENyglaGGPVHDAT 242
Cdd:PRK10768 162 AEFNIAVDPEAAAIVFRSGIPIVMCGLDVTNQALLTPDYLATL-PELNRTGKMLHALFSHYRSGSMQT----GLRMHDVC 236
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 446337600 243 CIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWF 298
Cdd:PRK10768 237 AIAYLLRPELFTLKPCFVDVETQGEFTAGATVVDIDGRLGKPANAQVALDIDVDGF 292
nuc_hydro_CaPnhB cd02650
NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes ...
5-294 5.49e-91

NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB). Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.


Pssm-ID: 239116 [Multi-domain]  Cd Length: 304  Bit Score: 273.00  E-value: 5.49e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   5 KIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKL-EINVPVYAGMPQPIMRQQI-VADNIH 82
Cdd:cd02650    1 KLILDTDPGIDDAMALAYALAHPDVDLIGVTTVYGNVTIETATRNALALLELFgRPDVPVAEGAAKPLTRPPFrIATFVH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  83 GETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGT-GNFTP 161
Cdd:cd02650   81 GDNGLGDVELPAPPRQPEDESAADFLIELANEYPGELTLVAVGPLTNLALALARDPDFAKLVKQVVVMGGAFTVpGNVTP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 162 SAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHDA 241
Cdd:cd02650  161 AAEANIHGDPEAADIVFTAGADLTMVGLDVTTQTLLTREDLDELRDSGGKAGQFLADMLDYYIDFYQESPGLRGCALHDP 240
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446337600 242 TCIGYLINPDGIKTQEMYVEVDVnSGPCYGRTVCDELGV----LGKPANTKVGITID 294
Cdd:cd02650  241 LAVAAAVDPSLFTTREGVVRVET-EGPTRGRTIGDRDGRrfwdSSPNATVAVDVDVD 296
nuc_hydro cd00455
nuc_hydro: Nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in ...
6-302 1.78e-75

nuc_hydro: Nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains eukaryotic, bacterial and archeal proteins similar to the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium, the purine-specific inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax and, pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases such as URH1 from Saccharomyces cerevisiae, RihA and RihB from Escherichia coli. Nucleoside hydrolases are of interest as a target for antiprotozoan drugs as, no nucleoside hydrolase activity or genes encoding these enzymes have been detected in humans and, parasitic protozoans lack de novo purine synthesis relying on nucleoside hydrolase to scavenge purine and/or pyrimidines from the environment.


Pssm-ID: 238257 [Multi-domain]  Cd Length: 295  Bit Score: 233.38  E-value: 1.78e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   6 IILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLIN-GLNVCQKLEINVPVYAGMPQPIMRQQIVADNIHGE 84
Cdd:cd00455    1 VILDTDPGIDDAFALMYALLHPEIELVGIVATYGNVTLEQATQNaAYLLELLGRLDIPVYAGATRPLTGEIPAAYPEIHG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  85 TGLDGPVFEPLTRQAEStHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGT-GNFTPSA 163
Cdd:cd00455   81 EGGLGLPIPPIIEADDP-EAVQLLIDLIRKYPDEITIVALGPLTNLAMAFILDPDIKDRVKEIVIMGGAFLVpGNVTPVA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 164 EFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFtlktQFENY---GLAGGPVHD 240
Cdd:cd00455  160 EANFYGDPEAANIVFNSAKNLTIVPLDVTNQAVLTPPMVERIFEQGTSIGLLIKPMIDY----YYKAYqkpGIEGSPIHD 235
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446337600 241 ATCIGYLINPDGIKTQEMYVEVDVNsGPCYGRTVCDELGVLGKPaNTKVGITIDTDWFWGLV 302
Cdd:cd00455  236 PLAVAYLLNPSMFDYSKVPVDVDTD-GLTRGQTIADFRENPGNG-VTRVAVNLDYPDFIELI 295
nuc_hydro_CeIAG cd02649
nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring ...
4-303 1.12e-69

nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains eukaryotic, bacterial and archeal proteins similar to the purine-preferring nucleoside hydrolase (IAG-NH) from C. elegans and the salivary purine nucleosidase from Aedes aegypti. C. elegans IAG-NH exhibits a high affinity for the substrate analogue p-nitrophenylriboside (p-NPR).


Pssm-ID: 239115 [Multi-domain]  Cd Length: 306  Bit Score: 218.67  E-value: 1.12e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   4 RKIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKL-EINVPVYAGMPQPIMRQQIVADNIH 82
Cdd:cd02649    1 RKLIIDTDCGGDDAWALLMALASPNVEVLAITCVHGNTNVEQVVKNALRVLEACgRRDIPVYRGASKPLLGPGPTAAYFH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  83 GETGL--DGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAY-GTGNF 159
Cdd:cd02649   81 GKDGFgdVGFPEPKDELELQKEHAVDAIIRLVREYPGEITLVALGPLTNLALAYRLDPSLPQKIKRLYIMGGNReGVGNT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 160 TPSAEFNIFADPEAARVVFTS-GVPLVMMGLDLTNQTVctpDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPV 238
Cdd:cd02649  161 TPAAEFNFHVDPEAAHIVLNSfGCPITIVPWETTLLAF---PLDWEFEDKWANRLEKALFAESLNRREYAFASEGLGGDG 237
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446337600 239 H---DATCIGYLINPDGIKTQEMY-VEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVE 303
Cdd:cd02649  238 WvpcDALAVAAALDPSIITRRLTYaVDVELHGELTRGQMVVDWLGTLKKKPNARVITKIDREKFKELLY 306
nuc_hydro_3 cd02653
NH_3: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial ...
5-313 1.71e-66

NH_3: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.


Pssm-ID: 239119 [Multi-domain]  Cd Length: 320  Bit Score: 211.08  E-value: 1.71e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   5 KIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKL-EINVPVYAGMPQPIMRQQIVADNIHG 83
Cdd:cd02653    1 KVIIDCDPGIDDALALLYLLASPDLDVVGITTTAGNVPVEQVAANALGVLELLgRTDIPVYLGADKPLAGPLTTAQDTHG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  84 ETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVpVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGT-GNFTPS 162
Cdd:cd02653   81 PDGLGYAELPASTRTLSDESAAQAWVDLARAHPDLIGLA-TGPLTNLALALREEPELPRLLRRLVIMGGAFNSrGNTSPV 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 163 AEFNIFADPEAARVVF----TSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQfENYGLAGGPV 238
Cdd:cd02653  160 AEWNYWVDPEAAKEVLaafgGHPVRPTICGLDVTRAVVLTPNLLERLARAKDSVGAFIEDALRFYFEFH-WAYGHGYGAV 238
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446337600 239 -HDATCIGYLINPDGIKTQEMYVEVdVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGYIKTH 313
Cdd:cd02653  239 iHDPLAAAVALNPNLARGRPAYVDV-ECTGVLTGQTVVDWAGFWGKGANAEILTKVDSQDFMALFIERVLAIADTI 313
PLN02717 PLN02717
uridine nucleosidase
4-296 1.25e-60

uridine nucleosidase


Pssm-ID: 178319 [Multi-domain]  Cd Length: 316  Bit Score: 195.98  E-value: 1.25e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   4 RKIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKL-EINVPVYAGMPQPIMR--QQIVADN 80
Cdd:PLN02717   1 KKLIIDTDPGIDDAMAILMALRSPEVEVIGLTTIFGNVTTKLATRNALHLLEMAgRPDVPVAEGSHEPLKGgtKPRIADF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  81 IHGETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGT-GNF 159
Cdd:PLN02717  81 VHGSDGLGNTNLPPPKGKKIEKSAAEFLVEKVSEYPGEVTVVALGPLTNLALAIKLDPSFAKKVGQIVVLGGAFFVnGNV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 160 TPSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVH 239
Cdd:PLN02717 161 NPAAEANIFGDPEAADIVFTSGADITVVGINVTTQVVLTDADLEELRDSKGKYAQFLCDICKFYRDWHRKSYGIDGIYLH 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446337600 240 DATCIGYLINPDGIKTQEMYVEVDVnSGPCYGRTVCD--------ELGVLGKPAnTKVGITIDTD 296
Cdd:PLN02717 241 DPTALLAAVRPSLFTYKEGVVRVET-EGICRGLTLFDnglkrwngENAWTGRPP-VKVAVTVDAP 303
nuc_hydro_1 cd02648
NH_1: A subgroup of nucleoside hydrolases. This group contains fungal proteins similar to ...
3-192 4.48e-35

NH_1: A subgroup of nucleoside hydrolases. This group contains fungal proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.


Pssm-ID: 239114 [Multi-domain]  Cd Length: 367  Bit Score: 130.39  E-value: 4.48e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   3 KRKIILDCDPGHDDAIAMMMA-AKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEINV-------------------P 62
Cdd:cd02648    1 PHPIIIDTDPGVDDVLAILLAlSSPEEVDVALISLTFGNTTLDHALRNVLRLFHVLERERawratpgvryrafsadaekP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  63 VYA-GMPQPIMRQQIVADNIHGETGLDG-----PVFEPLTRQAESTH---------AVKYIIDTLMAS-DGDITLVPVGP 126
Cdd:cd02648   81 IVAsGSDQPLEGERLTASYFHGRDGLSGvhwlhPDFTPVETWIPEIVapltpsdkpAYDVILDILREEpDHTVTIAALGP 160
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446337600 127 LSNIAVAMRMQPAILPKIREIVLMGGAYGT-GNFTPSAEFNIFADPEAARVVFTSG----------VPLVMMGLDLT 192
Cdd:cd02648  161 LTNLAAAARKDPETFAKVGEVVVMGGAIDVpGNTSPVAEFNCFADPYAAAVVIDEPpstapearrkLPLQVFPLDIT 237
nuc_hydro_CjNH cd02654
nuc_hydro_CjNH. Nucleoside hydrolases similar to Campylobacter jejuni nucleoside hydrolase. ...
5-298 5.51e-33

nuc_hydro_CjNH. Nucleoside hydrolases similar to Campylobacter jejuni nucleoside hydrolase. This group contains eukaryotic and bacterial proteins similar to C. jejuni nucleoside hydrolase. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. C. jejuni nucleoside hydrolase is inactive against natural nucleosides or against common nucleoside analogues.


Pssm-ID: 239120 [Multi-domain]  Cd Length: 318  Bit Score: 123.82  E-value: 5.51e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   5 KIILDCD----PGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLingLNVCQKLEI----NVPVYAGMPQPIMRQ-- 74
Cdd:cd02654    1 KVILDNDiamgRDTDDGLALALLLWSPEVELLGLSAVSGNCWLSAVT---YNVLRMLELagadAIPVYAGANTPLGRTnr 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  75 ----------QIVADNIHGETGLDGPVFEPLTRQAESThAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKI 144
Cdd:cd02654   78 afhaweslygAYLWQGAWSPEYSDMYTNASIIRNASIP-AALFMIEMVRKHPHEVSIVAAGPLTNLALALRIDPDFAPLA 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 145 REIVLMGGA------YGTGNFTpsAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSD 218
Cdd:cd02654  157 KELVIMGGYlddigeFVNRHYA--SDFNLIMDPEAASIVLTAPWKSITIPGNVTNRTCLTPEQIKADDPLRDFIRETLDL 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 219 IMNFTLKTQfenYGLAGGPVHDATCIGYLINPDgIKTQEMYVEVDVN---SGPCYGRTVCDELGVLG-KPANTKVGITID 294
Cdd:cd02654  235 PIDYAKEFV---GTGDGLPMWDELASAVALDPE-LATSSETFYIDVQtdsDGGGQLIWPEDLLLAKGlRPYHVKVITAVD 310

                 ....
gi 446337600 295 TDWF 298
Cdd:cd02654  311 VAAF 314
nuc_hydro_TvIAG cd02647
nuc_hydro_ TvIAG: Nucleoside hydrolases similar to the Inosine-adenosine-guanosine-preferring ...
6-194 1.20e-29

nuc_hydro_ TvIAG: Nucleoside hydrolases similar to the Inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. Nucleoside hydrolases vary in their substrate specificity. This group contains eukaryotic and bacterial proteins similar to the purine specific inosine-adenosine-guanosine-preferring nucleoside hydrolase (IAG-NH) from T. vivax. T. vivax IAG-NH is of the order of a thousand to ten thousand fold more specific towards the naturally occurring purine nucleosides, than towards the pyrimidine nucleosides.


Pssm-ID: 239113 [Multi-domain]  Cd Length: 312  Bit Score: 114.82  E-value: 1.20e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   6 IILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQtlDKTLINGLNVCQKL------EINVPVYAG-------MPQPIM 72
Cdd:cd02647    3 VIFDHDGNVDDLVALLLLLKNEKVDLKGIGVSGIDA--DCYVEPAVSVTRKLidrlgqRDAIPVGKGgsravnpFPRSWR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  73 RQqivADNIHGETGLDGPVFEPLTRQAESThAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGG 152
Cdd:cd02647   81 RD---AAFSVDHLPILNERYTVETPLAEET-AQLVLIEKIKASLEPVTLLVTGPLTNLARALDSDPDISSNIEEVYIMGG 156
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 446337600 153 AYGT-GN-FTPS----AEFNIFADPEAARVVFTSGVPLVMMGLDLTNQ 194
Cdd:cd02647  157 GVDApGNvFTPPsngtAEFNIFWDPLAAKTVFDSGLKITLVPLDATNT 204
nuc_hydro_2 cd02652
NH_2: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial ...
6-280 1.94e-14

NH_2: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.


Pssm-ID: 239118 [Multi-domain]  Cd Length: 293  Bit Score: 72.15  E-value: 1.94e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   6 IILDCDPGHD--DAIAMMMAAKHPAIDLLGITIVAGNQTLD--KTLINGLNvcqkLEINVPV---YAGMPQPIMRqqiva 78
Cdd:cd02652    1 LILDTDIGGDpdDALALALAHALQKCDLLAVTITLADASARraIDAVNRFY----GRGDIPIgadYHGWPEDAKD----- 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  79 dniHGETGLDGPVFEP-LTRQAESTHAVKYIIDTLM-ASDGDITLVPVGPLSNIA------VAMRMQPAIL-PKIREIVL 149
Cdd:cd02652   72 ---HAKFLLEGDRLHHdLESAEDALDAVKALRRLLAsAEDASVTIVSIGPLTNLAalldadADPLTGPELVrQKVKRLVV 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 150 MGGAYG-TGNFTPSAEFNIFADPEAARVVFTSGvplvmmgldltnQTVCTPDVIAR-----MERAGGPAGElfsDIMNFT 223
Cdd:cd02652  149 MGGAFYdPDGNVQHREYNFVTDPKAAQRVAGRA------------QHLGIPVRIVWsgyelGEAVSYPHVL---VIAHPF 213
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 446337600 224 LKTQFENYGLAGG--PVHDATCIGYLINPDGiktqeMYVEVdVNSGPCYGRTVCDELGV 280
Cdd:cd02652  214 NTPVFAAYWPRSHrrPLWDPLTLLAAVRGGG-----MLFDL-REVQLGPGRVEVDSSGV 266
PTZ00313 PTZ00313
inosine-adenosine-guanosine-nucleoside hydrolase; Provisional
4-273 3.96e-12

inosine-adenosine-guanosine-nucleoside hydrolase; Provisional


Pssm-ID: 140334 [Multi-domain]  Cd Length: 326  Bit Score: 66.04  E-value: 3.96e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600   4 RKIILDCDPGHDDAIAMMMAAKHP-AIDLLGITIVAGNQTLDktliNGLNVCQKL------EINVPVY--------AGMP 68
Cdd:PTZ00313   3 KPVILDHDGNHDDLVALALLLGNPeKVKVIGCICTDADCFVD----DAFNVTGKLmcmmhaREATPLFpigkssfkGVNP 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600  69 QPiMRQQIVADNIHGETGLDGP----VFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAM-RMQPAILPK 143
Cdd:PTZ00313  79 FP-SEWRWSAKNMDDLPCLNIPehvaIWEKLKPENEALVGEELLADLVMSSPEKVTICVTGPLSNVAWCIeKYGEEFTKK 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 144 IREIVLMGGAYGTGN--FTP----SAEFNIFADPEAARVVFT-SGVPLVMMGLDLTNQTVCTPDVIARMeraGGPAGELF 216
Cdd:PTZ00313 158 VEECVIMGGAVDVGGnvFLPgtdgSAEWNIYWDPPAAKTVLMcPHIRKVLFSLDSTNSVPVTSEVVKKF---GAQNKYLL 234
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 446337600 217 SDIMNFT--LKTQFENYGLAGG-PVHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRT 273
Cdd:PTZ00313 235 SQFVGSTwaMCTHHELLRPGDGyYAWDVLTAAYVIERNLAELEPVPLEVVVEKAKNEGRT 294
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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