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Conserved domains on  [gi|446347725|ref|WP_000425580|]
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MULTISPECIES: DUF5592 family protein [Bacillus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF5592 super family cl38616
Family of unknown function (DUF5592); This is a family of unknown function found in Bacilli. ...
 7-93 4.60e-03

Family of unknown function (DUF5592); This is a family of unknown function found in Bacilli.Family members contain two predicted trans-membrane regions.


The actual alignment was detected with superfamily member pfam17332:

Pssm-ID: 407438  Cd Length: 89  Bit Score: 33.61  E-value: 4.60e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446347725    7 PKNTKQEIKI-AFFYLIDAGIVGLMLLLASYMPKFipVGGFARIMFYVLFGAFGLFLCIKPANSPTNRNMMVIIDMLKQD 85
Cdd:pfam17332   4 PKEISSELKInKKIYLTDLLMLLVALGFTFIFSGV--VHPSFVVLFYIFVIILTIFLVIKSITNPKKRNYKAIYLALVRD 81


                  ....*...
gi 446347725   86 NKNYHPIE 93
Cdd:pfam17332  82 KKTYVAID 89
 
Name Accession Description Interval E-value
DUF5592 pfam17332
Family of unknown function (DUF5592); This is a family of unknown function found in Bacilli. ...
 7-93 4.60e-03

Family of unknown function (DUF5592); This is a family of unknown function found in Bacilli.Family members contain two predicted trans-membrane regions.


Pssm-ID: 407438  Cd Length: 89  Bit Score: 33.61  E-value: 4.60e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446347725    7 PKNTKQEIKI-AFFYLIDAGIVGLMLLLASYMPKFipVGGFARIMFYVLFGAFGLFLCIKPANSPTNRNMMVIIDMLKQD 85
Cdd:pfam17332   4 PKEISSELKInKKIYLTDLLMLLVALGFTFIFSGV--VHPSFVVLFYIFVIILTIFLVIKSITNPKKRNYKAIYLALVRD 81


                  ....*...
gi 446347725   86 NKNYHPIE 93
Cdd:pfam17332  82 KKTYVAID 89
 
Name Accession Description Interval E-value
DUF5592 pfam17332
Family of unknown function (DUF5592); This is a family of unknown function found in Bacilli. ...
 7-93 4.60e-03

Family of unknown function (DUF5592); This is a family of unknown function found in Bacilli.Family members contain two predicted trans-membrane regions.


Pssm-ID: 407438  Cd Length: 89  Bit Score: 33.61  E-value: 4.60e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446347725    7 PKNTKQEIKI-AFFYLIDAGIVGLMLLLASYMPKFipVGGFARIMFYVLFGAFGLFLCIKPANSPTNRNMMVIIDMLKQD 85
Cdd:pfam17332   4 PKEISSELKInKKIYLTDLLMLLVALGFTFIFSGV--VHPSFVVLFYIFVIILTIFLVIKSITNPKKRNYKAIYLALVRD 81


                  ....*...
gi 446347725   86 NKNYHPIE 93
Cdd:pfam17332  82 KKTYVAID 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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