|
Name |
Accession |
Description |
Interval |
E-value |
| HI0933_like |
pfam03486 |
HI0933-like protein; |
4-393 |
0e+00 |
|
HI0933-like protein;
Pssm-ID: 427330 [Multi-domain] Cd Length: 406 Bit Score: 631.54 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 4 FDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPAAYLSQ---NPHFCKSALARYTQW 80
Cdd:pfam03486 1 FDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLGRKILISGGGRCNVTNLSEEPDNFLSRypgNPKFLKSALSRFTPW 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 81 DFIDLVGRYGIAWHEKTLGQLFC-DDSAQRIVDMLVAECDKGGVTMRLRSEVLSVERDESG-FVLALNGETVTTQKLVIA 158
Cdd:pfam03486 81 DFIAFFESLGVPLKEEDHGRLFPdSDKASDIVDALLNELKELGVKIRLRTRVLSVEKDDDGrFRVKTGGEELEADSLVLA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 159 SGGLSMPGLGASPFGYKIAEQFGLKVLPTRAGLVPFTLHKPLLeQLQTLSGVSVPCVIT--ARNGTVFRENLLFTHRGLS 236
Cdd:pfam03486 161 TGGLSWPKTGSTGFGYPLAEQFGHTIIPLRPALVPFTIDEPFL-FLKRLSGISLKNVVLsnGKGGITFRGELLFTHRGLS 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 237 GPAVLQISSYW------QPGELVSINLLPDLSLEDV---LNEQRNAHPNQSLKNTLAMHLPKRLVECL-QQLGHIPDVSL 306
Cdd:pfam03486 240 GPAILQLSSYWrrailkKGGVTLSIDLLPDLDAEELaarLEKPRGAHPKKSLKNSLAGLLPKRLAEFLlEQAGIEPDKKL 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 307 RQLNVRDQQALVDTLTAWQVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARRVPGLYFIGEVMDVTGWLGGYNFQWAWSS 386
Cdd:pfam03486 320 AQLSKKELAALAQLLKAWTFTPNGTEGYRTAEVTAGGVDTKELSSKTMESKKVPGLFFAGEVLDVDGWTGGYNLQWAWSS 399
|
....*..
gi 446361376 387 AWACAQD 393
Cdd:pfam03486 400 GYAAGQG 406
|
|
| YhiN |
COG2081 |
Predicted flavoprotein YhiN [General function prediction only]; |
7-396 |
0e+00 |
|
Predicted flavoprotein YhiN [General function prediction only];
Pssm-ID: 441684 [Multi-domain] Cd Length: 402 Bit Score: 597.80 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 7 VIIGAGAAGMFCAAQAGQAGSRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPA--AYLSQNPHFCKSALARYTQWDFID 84
Cdd:COG2081 1 IVIGAGAAGLMAAITAAERGARVLLLEKNPKVGRKILISGGGRCNFTNSEPLPEflNYYGGNPHFLKSALSRFTPEDLIA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 85 LVGRYGIAWHEKTLGQLFCDDS-AQRIVDMLVAECDKGGVTMRLRSEVLSVERDESGFVLAL-NGETVTTQKLVIASGGL 162
Cdd:COG2081 81 FFEGLGIETKEESSGRVFPDSSkASDILRALLAELREAGVEIRLRTRVTGIEKEDGGFGVETpDGETVRADAVVLATGGL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 163 SMPGLGASPFGYKIAEQFGLKVLPTRAGLVPFTLHKPLLEQLQtlsGVSVPCV-ITARNGTV--FRENLLFTHRGLSGPA 239
Cdd:COG2081 161 SYPKLGSTGDGYRLAEQFGHTITPLRPALVPLTLSEHFFKRLA---GLSLKNVaLSVGGKKIasFRGELLFTHRGLSGPA 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 240 VLQISSYWQ-----PGELVSINLLPDLSLEDV---LNEQRNAHPNQSLKNTLAMHLPKRLVECLQQLgHIPDVSLRQLNV 311
Cdd:COG2081 238 ILQLSSYWRdalkkGGATLTIDLLPDLDLEELdarLARPREKNGKKSLKNVLRGLLPKRLAALLLEL-ADPDKPLAQLSK 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 312 RDQQALVDTLTAWQVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARRVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACA 391
Cdd:COG2081 317 KEREALAALLKAWPLTPTGTRGYDEAIVTAGGVDTKELDPKTMESKKVPGLYFAGEVLDVDGPTGGYNLQWAWSSGYAAG 396
|
....*
gi 446361376 392 QDLAA 396
Cdd:COG2081 397 QAAAA 401
|
|
| TIGR00275 |
TIGR00275 |
flavoprotein, HI0933 family; The model when searched with a partial length search brings in ... |
7-392 |
9.20e-170 |
|
flavoprotein, HI0933 family; The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity]
Pssm-ID: 272992 [Multi-domain] Cd Length: 400 Bit Score: 480.56 E-value: 9.20e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 7 VIIGAGAAGMFCAAQAGQAGSRVLLIDNGKKPGRKILMSGGGRCNFTNLYV--EPAAYLSQNPHFCKSALARYTQWDFID 84
Cdd:TIGR00275 1 IIIGGGAAGLMAAITAARAGLSVLLLEKNKKIGKKLLISGGGRCNLTNSCPtpEFVAYYPRNGKFLRSALSRFSNKDLID 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 85 LVGRYGIAWHEKTLGQLF-CDDSAQRIVDMLVAECDKGGVTMRLRSEVLSVERDESGFVLALNGETVTTQKLVIASGGLS 163
Cdd:TIGR00275 81 FFESLGLELKVEEDGRVFpCSDSAADVLDALLNELKELGVEILTNSKVKSIEKEDGGFGVETSGGEYEADKVIIATGGLS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 164 MPGLGASPFGYKIAEQFGLKVLPTRAGLVPFTLHKPLLEQLqtlSGVSVPCVITA-RNGTVFRE---NLLFTHRGLSGPA 239
Cdd:TIGR00275 161 YPQLGSTGDGYEIAESLGHTIVPPVPALVPLTLDESFLKEL---SGISLDGVVLSlVNGKKVLEefgELLFTHFGLSGPA 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 240 VLQISSYWQ------PGELVSINLLPDLSLEDV---LNEQRNAHPNQSLKNTLAMHLPKRLVE-CLQQLGHIPDVSLRQL 309
Cdd:TIGR00275 238 ILDLSAFAArallkhKGVELEIDLLPDLSEEELeqrLKRLRKSNPKKTVKNILKGLLPKRLAElLLEQLGIDPDLPAAQL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 310 NVRDQQALVDTLTAWQVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARRVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWA 389
Cdd:TIGR00275 318 SKKEIKKLVQLLKNWPFTISGTRGFKEAEVTAGGVSLKEINPKTMESKLVPGLYFAGEVLDIDGDTGGYNLQWAWSSGYL 397
|
...
gi 446361376 390 CAQ 392
Cdd:TIGR00275 398 AGK 400
|
|
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
4-167 |
3.59e-09 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 57.44 E-value: 3.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 4 FDAVIIGAGAAGMFCAAQAGQAGSRVLLIDnGKKPgrkilmsgGGRCNFTNlYVEPaaYlsqnPHFcksalarytqwdfi 83
Cdd:COG0492 1 YDVVIIGAGPAGLTAAIYAARAGLKTLVIE-GGEP--------GGQLATTK-EIEN--Y----PGF-------------- 50
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 84 dlvgRYGIawhektlgqlfcddSAQRIVDMLVAECDKGGVTMRLRsEVLSVERDESGFVLAL-NGETVTTQKLVIASGG- 161
Cdd:COG0492 51 ----PEGI--------------SGPELAERLREQAERFGAEILLE-EVTSVDKDDGPFRVTTdDGTEYEAKAVIIATGAg 111
|
....*....
gi 446361376 162 ---LSMPGL 167
Cdd:COG0492 112 prkLGLPGE 120
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
1-161 |
3.40e-08 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 55.22 E-value: 3.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 1 MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDngKKPGRK--ILMSGGGrCNFTNLYVEPAA----------------- 61
Cdd:COG1053 1 DHEYDVVVVGSGGAGLRAALEAAEAGLKVLVLE--KVPPRGghTAAAQGG-INAAGTNVQKAAgedspeehfydtvkggd 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 62 YLSqNP----HFCKSALARytqwdfIDLVGRYGIAWHEKTLGQL--FCDDSAQR-----------IVDMLVAECDKGGVT 124
Cdd:COG1053 78 GLA-DQdlveALAEEAPEA------IDWLEAQGVPFSRTPDGRLpqFGGHSVGRtcyagdgtghaLLATLYQAALRLGVE 150
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 446361376 125 MRLRSEVLSVERDESGF--VLALNG----ETVTTQKLVIASGG 161
Cdd:COG1053 151 IFTETEVLDLIVDDGRVvgVVARDRtgeiVRIRAKAVVLATGG 193
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
5-161 |
1.58e-07 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 52.79 E-value: 1.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 5 DAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGKKPGR-------KILMSG---GGRCNFTNLYVEPAAYL-----SQNPHF 69
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGSgasgrnaGLIHPGlryLEPSELARLALEALDLWeeleeELGIDC 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 70 ----CKSALARYTQW-----DFIDLVGRYGIAWH--------------EKTLGQLFCDDSAQ----RIVDMLVAECDKGG 122
Cdd:pfam01266 81 gfrrCGVLVLARDEEeealeKLLAALRRLGVPAElldaeelrelepllPGLRGGLFYPDGGHvdpaRLLRALARAAEALG 160
|
170 180 190
....*....|....*....|....*....|....*....
gi 446361376 123 VTMRLRSEVLSVERDESGFVLALNGEtvtTQKLVIASGG 161
Cdd:pfam01266 161 VRIIEGTEVTGIEEEGGVWGVVTTGE---ADAVVNAAGA 196
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
1-158 |
3.87e-07 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 51.48 E-value: 3.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 1 MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDngKKPGRkilmSGGGRcnftnlyvepAAYLSQNphfcksALARYTQW 80
Cdd:COG0654 1 MMRTDVLIVGGGPAGLALALALARAGIRVTVVE--RAPPP----RPDGR----------GIALSPR------SLELLRRL 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 81 DFIDLVGRYGIAWHE---------KTLGQLFCDDSA---------QRIVDMLVAECDKGGVTMRLRSEVLSVERDESGFV 142
Cdd:COG0654 59 GLWDRLLARGAPIRGirvrdgsdgRVLARFDAAETGlpaglvvprADLERALLEAARALGVELRFGTEVTGLEQDADGVT 138
|
170
....*....|....*..
gi 446361376 143 LAL-NGETVTTqKLVIA 158
Cdd:COG0654 139 VTLaDGRTLRA-DLVVG 154
|
|
| PRK06370 |
PRK06370 |
FAD-containing oxidoreductase; |
1-188 |
5.80e-07 |
|
FAD-containing oxidoreductase;
Pssm-ID: 235787 [Multi-domain] Cd Length: 463 Bit Score: 51.36 E-value: 5.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 1 MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGkkpgrkiLMsgGGRC-NF----TNLYVEPA--AYLSQNPHfcksa 73
Cdd:PRK06370 3 AQRYDAIVIGAGQAGPPLAARAAGLGMKVALIERG-------LL--GGTCvNTgcvpTKTLIASAraAHLARRAA----- 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 74 larytqwDF-IDLVGRYGIAWHEktlgqlfCDDSAQRIVDMlvaecDKGGVTMRLRS-EVLSVERDESGFV----LALNG 147
Cdd:PRK06370 69 -------EYgVSVGGPVSVDFKA-------VMARKRRIRAR-----SRHGSEQWLRGlEGVDVFRGHARFEspntVRVGG 129
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 446361376 148 ETVTTQKLVIASGGL----SMPGLGASPFgYKIAEQFGLKVLPTR 188
Cdd:PRK06370 130 ETLRAKRIFINTGARaaipPIPGLDEVGY-LTNETIFSLDELPEH 173
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
5-379 |
1.20e-06 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 50.36 E-value: 1.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 5 DAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGKKPGRKILMSGGGRCNFTNL--------------------YVEPAAYLS 64
Cdd:pfam00890 1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGGATAWSSGGIDALGNPpqggidspelhptdtlkgldELADHPYVE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 65 QNPHFCKSALARYTQWdFIDLVGRYGIAWHEKTLG-----QLFCDDSAQR---------IVDMLVAECDKGGVTMRLRSE 130
Cdd:pfam00890 81 AFVEAAPEAVDWLEAL-GVPFSRTEDGHLDLRPLGglsatWRTPHDAADRrrglgtghaLLARLLEGLRKAGVDFQPRTA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 131 VLSVERDE---SGFVLAL--NGETVT---TQKLVIASGGLSMPGLGASPF---------------GYKIAEQFGLKVLPT 187
Cdd:pfam00890 160 ADDLIVEDgrvTGAVVENrrNGREVRiraIAAVLLATGGFGRLAELLLPAagyadttnppantgdGLALALRAGAALTDD 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 188 RaglvpftlhkplLEQLQTLsgvsVPCVITARNGTVFREnllfthRGLSGPAVLQISSYWQ--PGELVSINLLPDLSLED 265
Cdd:pfam00890 240 L------------MEFVQFH----PTSLVGIRLGSGLLI------EALRGEGGILVNKDGRrfMNELASRDVVSRAITRN 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 266 VLNEQRNAHPNQSLK-----NTLAMHLPKRLVECLQQLG-HIPDvslrqlnvRDQQALVDTLtawqvqpngtegyrtaeV 339
Cdd:pfam00890 298 EIDEGRGANVYLDASgsldaEGLEATLPAINEEAIFGLDvDPYD--------RPIPVFPAQH-----------------Y 352
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 446361376 340 TLGGVDTNElSSRTMEARR--VPGLYFIGEVMdvTGWLGGYN 379
Cdd:pfam00890 353 TMGGVRTDE-NGRVLDADGqpIPGLYAAGEVA--CGGVHGAN 391
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
2-161 |
1.22e-06 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 49.90 E-value: 1.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 2 ERFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGkKPGRKilMSG--GGRCNFTNLYVEPAAYLsqnphfcksALARYTQ 79
Cdd:COG0665 1 ATADVVVIGGGIAGLSTAYHLARRGLDVTVLERG-RPGSG--ASGrnAGQLRPGLAALADRALV---------RLAREAL 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 80 WDFIDLVGRYGI------------AWHEKTLGQL--------------------------------------FCDDSAQ- 108
Cdd:COG0665 69 DLWRELAAELGIdcdfrrtgvlylARTEAELAALraeaealralglpvelldaaelrerepglgspdyagglYDPDDGHv 148
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 446361376 109 ---RIVDMLVAECDKGGVTMRLRSEVLSVERDESGFV-LALNGETVTTQKLVIASGG 161
Cdd:COG0665 149 dpaKLVRALARAARAAGVRIREGTPVTGLEREGGRVTgVRTERGTVRADAVVLAAGA 205
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
4-167 |
1.27e-06 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 49.62 E-value: 1.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 4 FDAVIIGAGAAGMFCAAQAGQAGSRVLLI-DNGKKPGRKILMSGGGRCnftnlYVEPAAYLSQNPHFcksalarytqwdf 82
Cdd:pfam07992 1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIeDEGTCPYGGCVLSKALLG-----AAEAPEIASLWADL------------- 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 83 idlvgrygIAWHEKTLGQLfcddsaqrivdmlvaecdKGGVTMRLRSEVLSVERDESGFVLAL----NGETVTTQKLVIA 158
Cdd:pfam07992 63 --------YKRKEEVVKKL------------------NNGIEVLLGTEVVSIDPGAKKVVLEElvdgDGETITYDRLVIA 116
|
170
....*....|...
gi 446361376 159 SGG----LSMPGL 167
Cdd:pfam07992 117 TGArprlPPIPGV 129
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
1-35 |
1.48e-06 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 50.18 E-value: 1.48e-06
10 20 30
....*....|....*....|....*....|....*
gi 446361376 1 MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNG 35
Cdd:PRK06292 1 MEKYDVIVIGAGPAGYVAARRAAKLGKKVALIEKG 35
|
|
| FAD_oxidored |
pfam12831 |
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ... |
5-140 |
3.23e-06 |
|
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.
Pssm-ID: 432816 [Multi-domain] Cd Length: 420 Bit Score: 48.76 E-value: 3.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 5 DAVIIGAGAAGmFCAA-QAGQAGSRVLLIDNGKKPGRkiLMSGGGRCNFTNLYVEpaaylsqnphfcKSALARYTQWDFI 83
Cdd:pfam12831 1 DVVVVGGGPAG-VAAAiAAARAGAKVLLVERRGFLGG--MLTSGLVGPDMGFYLN------------KEQVVGGIAREFR 65
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 84 D-LVGRYGIAWHEKTLGQLFCDDS--AQRIVDMLVAEcdkGGVTMRLRSEVLSVERDESG 140
Cdd:pfam12831 66 QrLRARGGLPGPYGLRGGWVPFDPevAKAVLDEMLAE---AGVTVLLHTRVVGVVKEGGR 122
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
1-167 |
3.26e-06 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 48.93 E-value: 3.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 1 MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGKkpgrkilmsGGGRC-NF----TNLYVEPAAYLSQNPHFcksala 75
Cdd:COG1249 1 MKDYDLVVIGAGPGGYVAAIRAAQLGLKVALVEKGR---------LGGTClNVgcipSKALLHAAEVAHEARHA------ 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 76 rytqwdfidlvGRYGIAWHEKTL--GQLFcdDSAQRIVDMLVaecdkGGVTMRLRSEVLSVERDESGF-----VLALNGE 148
Cdd:COG1249 66 -----------AEFGISAGAPSVdwAALM--ARKDKVVDRLR-----GGVEELLKKNGVDVIRGRARFvdphtVEVTGGE 127
|
170 180
....*....|....*....|...
gi 446361376 149 TVTTQKLVIASGG----LSMPGL 167
Cdd:COG1249 128 TLTADHIVIATGSrprvPPIPGL 150
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
11-160 |
1.11e-05 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 46.50 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 11 AGAAGMFCAAQAGQAGSRVLLIDNGKKPGRKILmsGGGrcnftnlyvepaaylsqnphFCKSALARYTQWDFIDLVGR-- 88
Cdd:COG0644 1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKIC--GGG--------------------LLPRALEELEPLGLDEPLERpv 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 89 --YGIAWHEKTLGQLFCDDSAQRIVD------MLVAECDKGGVTMRLRSEVLSVERDESGFVLAL-NGETVTTQKLVIAS 159
Cdd:COG0644 59 rgARFYSPGGKSVELPPGRGGGYVVDrarfdrWLAEQAEEAGAEVRTGTRVTDVLRDDGRVVVRTgDGEEIRADYVVDAD 138
|
.
gi 446361376 160 G 160
Cdd:COG0644 139 G 139
|
|
| GlpB |
COG3075 |
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]; |
3-36 |
2.65e-05 |
|
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];
Pssm-ID: 442309 Cd Length: 415 Bit Score: 45.94 E-value: 2.65e-05
10 20 30
....*....|....*....|....*....|....
gi 446361376 3 RFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGK 36
Cdd:COG3075 2 KFDVVVIGGGLAGLTAAIRAAEAGLRVAIVSAGQ 35
|
|
| COG2509 |
COG2509 |
FAD-dependent dehydrogenase [General function prediction only]; |
1-36 |
2.95e-05 |
|
FAD-dependent dehydrogenase [General function prediction only];
Pssm-ID: 441999 [Multi-domain] Cd Length: 466 Bit Score: 45.87 E-value: 2.95e-05
10 20 30
....*....|....*....|....*....|....*.
gi 446361376 1 MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGK 36
Cdd:COG2509 28 SLKYDVVIVGAGPAGLFAALELAEAGLKPLVLERGK 63
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
1-165 |
4.43e-05 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 45.24 E-value: 4.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 1 MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGKKPGrkilmsG--------GGRC---NFTNLYVEpAAYLSQNPHF 69
Cdd:COG2072 4 TEHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVG------GtwrdnrypGLRLdtpSHLYSLPF-FPNWSDDPDF 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 70 C-KSALARYTQwDFIDlvgRYGIAWHektlgqlfcddsaqrivdmlvaecdkggvtMRLRSEVLSVERDES--GFVLAL- 145
Cdd:COG2072 77 PtGDEILAYLE-AYAD---KFGLRRP------------------------------IRFGTEVTSARWDEAdgRWTVTTd 122
|
170 180
....*....|....*....|
gi 446361376 146 NGETVTTQKLVIASGGLSMP 165
Cdd:COG2072 123 DGETLTARFVVVATGPLSRP 142
|
|
| PRK05329 |
PRK05329 |
glycerol-3-phosphate dehydrogenase subunit GlpB; |
3-35 |
9.38e-05 |
|
glycerol-3-phosphate dehydrogenase subunit GlpB;
Pssm-ID: 235412 Cd Length: 422 Bit Score: 44.46 E-value: 9.38e-05
10 20 30
....*....|....*....|....*....|...
gi 446361376 3 RFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNG 35
Cdd:PRK05329 2 KFDVLVIGGGLAGLTAALAAAEAGKRVALVAKG 34
|
|
| PRK12843 |
PRK12843 |
FAD-dependent oxidoreductase; |
2-48 |
1.06e-04 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 237225 [Multi-domain] Cd Length: 578 Bit Score: 44.34 E-value: 1.06e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 446361376 2 ERFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGKKPGRKILMSGGG 48
Cdd:PRK12843 15 AEFDVIVIGAGAAGMSAALFAAIAGLKVLLVERTEYVGGTTATSAGT 61
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
8-39 |
1.42e-04 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 39.82 E-value: 1.42e-04
10 20 30
....*....|....*....|....*....|..
gi 446361376 8 IIGAGAAGMFCAAQAGQAGSRVLLIDNGKKPG 39
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLG 32
|
|
| PRK07121 |
PRK07121 |
FAD-binding protein; |
1-47 |
3.26e-04 |
|
FAD-binding protein;
Pssm-ID: 180854 [Multi-domain] Cd Length: 492 Bit Score: 42.57 E-value: 3.26e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 446361376 1 MERFDAVIIGAGAAGMfCAA-QAGQAGSRVLLIDNGKKPGRKILMSGG 47
Cdd:PRK07121 18 DDEADVVVVGFGAAGA-CAAiEAAAAGARVLVLERAAGAGGATALSGG 64
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
1-39 |
3.37e-04 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 42.53 E-value: 3.37e-04
10 20 30
....*....|....*....|....*....|....*....
gi 446361376 1 MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGKKPG 39
Cdd:COG1233 1 MMMYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTPG 39
|
|
| PRK05249 |
PRK05249 |
Si-specific NAD(P)(+) transhydrogenase; |
1-39 |
4.82e-04 |
|
Si-specific NAD(P)(+) transhydrogenase;
Pssm-ID: 235373 [Multi-domain] Cd Length: 461 Bit Score: 42.07 E-value: 4.82e-04
10 20 30
....*....|....*....|....*....|....*....
gi 446361376 1 MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGKKPG 39
Cdd:PRK05249 3 MYDYDLVVIGSGPAGEGAAMQAAKLGKRVAVIERYRNVG 41
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
2-33 |
5.99e-04 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 42.09 E-value: 5.99e-04
10 20 30
....*....|....*....|....*....|..
gi 446361376 2 ERFDAVIIGAGAAGMFCAAQAGQAGSRVLLID 33
Cdd:COG3573 4 MDADVIVVGAGLAGLVAAAELADAGRRVLLLD 35
|
|
| PRK10015 |
PRK10015 |
oxidoreductase; Provisional |
2-47 |
6.74e-04 |
|
oxidoreductase; Provisional
Pssm-ID: 182194 [Multi-domain] Cd Length: 429 Bit Score: 41.50 E-value: 6.74e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 446361376 2 ERFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGKKPGRKIlMSGG 47
Cdd:PRK10015 4 DKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKN-MTGG 48
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
1-32 |
8.22e-04 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 41.25 E-value: 8.22e-04
10 20 30
....*....|....*....|....*....|..
gi 446361376 1 MERFDAVIIGAGAAGMFCAAQAGQAGsRVLLI 32
Cdd:COG0029 2 RLKTDVLVIGSGIAGLSAALKLAERG-RVTLL 32
|
|
| TGR |
TIGR01438 |
thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member ... |
4-33 |
8.41e-04 |
|
thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member of the pyridine nucleotide disulfide oxidoreductase family contains a C-terminal motif Cys-SeCys-Gly, where SeCys is selenocysteine encoded by TGA (in some sequence reports interpreted as a stop codon). In some members of this subfamily, Cys-SeCys-Gly is replaced by Cys-Cys-Gly. The reach of the selenium atom at the C-term arm of the protein is proposed to allow broad substrate specificity.
Pssm-ID: 273624 [Multi-domain] Cd Length: 484 Bit Score: 41.38 E-value: 8.41e-04
10 20 30
....*....|....*....|....*....|
gi 446361376 4 FDAVIIGAGAAGMFCAAQAGQAGSRVLLID 33
Cdd:TIGR01438 3 YDLIVIGGGSGGLAAAKEAAAYGAKVMLLD 32
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
1-33 |
8.75e-04 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 41.42 E-value: 8.75e-04
10 20 30
....*....|....*....|....*....|...
gi 446361376 1 MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLID 33
Cdd:PRK12834 2 AMDADVIVVGAGLAGLVAAAELADAGKRVLLLD 34
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
116-184 |
1.42e-03 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 40.18 E-value: 1.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446361376 116 AECDKGGVTMRLRSEVLSVERDEsGFVLALNGETVTTQKLVIASG---------GLSMPG-------------------- 166
Cdd:COG0446 44 ESFERKGIDVRTGTEVTAIDPEA-KTVTLRDGETLSYDKLVLATGarprpppipGLDLPGvftlrtlddadalrealkef 122
|
90 100
....*....|....*....|....*...
gi 446361376 167 -------LGASPFGYKIAEQF---GLKV 184
Cdd:COG0446 123 kgkravvIGGGPIGLELAEALrkrGLKV 150
|
|
| PRK10157 |
PRK10157 |
putative oxidoreductase FixC; Provisional |
4-49 |
2.14e-03 |
|
putative oxidoreductase FixC; Provisional
Pssm-ID: 182273 [Multi-domain] Cd Length: 428 Bit Score: 39.89 E-value: 2.14e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 446361376 4 FDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGKKPGRKILMsgGGR 49
Cdd:PRK10157 6 FDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVT--GGR 49
|
|
| PRK07494 |
PRK07494 |
UbiH/UbiF family hydroxylase; |
1-33 |
2.23e-03 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181001 [Multi-domain] Cd Length: 388 Bit Score: 39.89 E-value: 2.23e-03
10 20 30
....*....|....*....|....*....|...
gi 446361376 1 MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLID 33
Cdd:PRK07494 5 KEHTDIAVIGGGPAGLAAAIALARAGASVALVA 37
|
|
| PRK06327 |
PRK06327 |
dihydrolipoamide dehydrogenase; Validated |
1-50 |
4.73e-03 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235779 [Multi-domain] Cd Length: 475 Bit Score: 39.14 E-value: 4.73e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 446361376 1 MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLIDNGKKPGRKilMSGGGRC 50
Cdd:PRK06327 2 SKQFDVVVIGAGPGGYVAAIRAAQLGLKVACIEAWKNPKGK--PALGGTC 49
|
|
| solA |
PRK11259 |
N-methyl-L-tryptophan oxidase; |
1-33 |
5.05e-03 |
|
N-methyl-L-tryptophan oxidase;
Pssm-ID: 236887 [Multi-domain] Cd Length: 376 Bit Score: 38.66 E-value: 5.05e-03
10 20 30
....*....|....*....|....*....|...
gi 446361376 1 MERFDAVIIGAGAAGMFCAAQAGQAGSRVLLID 33
Cdd:PRK11259 1 TMRYDVIVIGLGSMGSAAGYYLARRGLRVLGLD 33
|
|
| |
