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Conserved domains on  [gi|446367334|ref|WP_000445189|]
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3-phosphoshikimate 1-carboxyvinyltransferase [Salmonella enterica]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK11860 super family cl29626
bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase;
1-427 0e+00

bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase;


The actual alignment was detected with superfamily member PRK11860:

Pssm-ID: 237003 [Multi-domain]  Cd Length: 661  Bit Score: 597.03  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334   1 MESLTLQPIARVDGAINLPGSKSVSNRALLLAALACGKTVLTNLLDSDDVRHMLNALSALGINYTLSADRTRcdITGNGG 80
Cdd:PRK11860   4 TEFLDLPPLLSAGGTVRLPGSKSISNRVLLLAALSEGTTTVRDLLDSDDTRVMLDALRALGCGVEQLGDTYR--ITGLGG 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  81 ALRAPGAlELFLGNAGTAMRPLAAALCLGQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEQENYPPLRLRGG--FT 158
Cdd:PRK11860  82 QFPVKQA-DLFLGNAGTAMRPLTAALALLGGEYELSGVPRMHERPIGDLVDALRQLGCDIDYLGNEGFPPLRIGPAplRL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 159 GGDIEVDGSVSSQFLTALLMTAPL-APEDTTIRVKGELVSKPYIDITLNLMKTFGVEITNHHYQQFVVKGGQQYHSPGRY 237
Cdd:PRK11860 161 DAPIRVRGDVSSQFLTALLMALPLvARRDITIEVVGELISKPYIEITLNLLARFGIAVQREGWQRFTIPAGSRYRSPGEI 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 238 LVEGDASSASYFLAAGAIKGGT-VKVTGIGRKSMQGDIRFADVLEKMGATITWGDDFIACTRGE--LHAIDMDMNHIPDA 314
Cdd:PRK11860 241 HVEGDASSASYFIAAGAIAGGApVRIEGVGRDSIQGDIRFAEAARAMGAQVTSGPNWLEVRRGAwpLKAIDLDCNHIPDA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 315 AMTIATTALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPAK---LHHADIGTYNDHRMAMCF 391
Cdd:PRK11860 321 AMTLAVMALYADGTTTLRNIASWRVKETDRIAAMATELRKLGATVEEGADYIRVTPPAQaadWKAAAIHTYDDHRMAMCF 400
                        410       420       430
                 ....*....|....*....|....*....|....*...
gi 446367334 392 SLVAL--SDTPVTILDPKCTAKTFPDYFEQLARMSTPA 427
Cdd:PRK11860 401 SLAAFnpAGLPVRINDPKCVAKTFPDYFEALFSVAQAD 438
 
Name Accession Description Interval E-value
PRK11860 PRK11860
bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase;
1-427 0e+00

bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase;


Pssm-ID: 237003 [Multi-domain]  Cd Length: 661  Bit Score: 597.03  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334   1 MESLTLQPIARVDGAINLPGSKSVSNRALLLAALACGKTVLTNLLDSDDVRHMLNALSALGINYTLSADRTRcdITGNGG 80
Cdd:PRK11860   4 TEFLDLPPLLSAGGTVRLPGSKSISNRVLLLAALSEGTTTVRDLLDSDDTRVMLDALRALGCGVEQLGDTYR--ITGLGG 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  81 ALRAPGAlELFLGNAGTAMRPLAAALCLGQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEQENYPPLRLRGG--FT 158
Cdd:PRK11860  82 QFPVKQA-DLFLGNAGTAMRPLTAALALLGGEYELSGVPRMHERPIGDLVDALRQLGCDIDYLGNEGFPPLRIGPAplRL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 159 GGDIEVDGSVSSQFLTALLMTAPL-APEDTTIRVKGELVSKPYIDITLNLMKTFGVEITNHHYQQFVVKGGQQYHSPGRY 237
Cdd:PRK11860 161 DAPIRVRGDVSSQFLTALLMALPLvARRDITIEVVGELISKPYIEITLNLLARFGIAVQREGWQRFTIPAGSRYRSPGEI 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 238 LVEGDASSASYFLAAGAIKGGT-VKVTGIGRKSMQGDIRFADVLEKMGATITWGDDFIACTRGE--LHAIDMDMNHIPDA 314
Cdd:PRK11860 241 HVEGDASSASYFIAAGAIAGGApVRIEGVGRDSIQGDIRFAEAARAMGAQVTSGPNWLEVRRGAwpLKAIDLDCNHIPDA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 315 AMTIATTALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPAK---LHHADIGTYNDHRMAMCF 391
Cdd:PRK11860 321 AMTLAVMALYADGTTTLRNIASWRVKETDRIAAMATELRKLGATVEEGADYIRVTPPAQaadWKAAAIHTYDDHRMAMCF 400
                        410       420       430
                 ....*....|....*....|....*....|....*...
gi 446367334 392 SLVAL--SDTPVTILDPKCTAKTFPDYFEQLARMSTPA 427
Cdd:PRK11860 401 SLAAFnpAGLPVRINDPKCVAKTFPDYFEALFSVAQAD 438
AroA COG0128
5-enolpyruvylshikimate-3-phosphate synthase [Amino acid transport and metabolism]; ...
1-423 0e+00

5-enolpyruvylshikimate-3-phosphate synthase [Amino acid transport and metabolism]; 5-enolpyruvylshikimate-3-phosphate synthase is part of the Pathway/BioSystem: Aromatic amino acid biosynthesis


Pssm-ID: 439898  Cd Length: 421  Bit Score: 592.45  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334   1 MESLTLQPIARVDGAINLPGSKSVSNRALLLAALACGKTVLTNLLDSDDVRHMLNALSALGINYTLSaDRTRCDITGNGG 80
Cdd:COG0128    1 MSSLTIAPPSPLKGTVRVPGSKSISHRALLLAALAEGESTIRNLLESDDTLATLEALRALGAEIEEL-DGGTLRVTGVGG 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  81 ALRAPGAlELFLGNAGTAMRPLAAALCLGQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEqENYPPLRLRGG-FTG 159
Cdd:COG0128   80 GLKEPDA-VLDCGNSGTTMRLLTGLLALQPGEVVLTGDESLRKRPMGRLLDPLRQLGARIESRG-GGYLPLTIRGGpLKG 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 160 GDIEVDGSVSSQFLTALLMTAPLAPEDTTIRVKGELVSKPYIDITLNLMKTFGVEITNHHYQQFVVKGGQQYHsPGRYLV 239
Cdd:COG0128  158 GEYEIPGSASSQFKSALLLAGPLAEGGLEITVTGELESKPYRDHTERMLRAFGVEVEVEGYRRFTVPGGQRYR-PGDYTV 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 240 EGDASSASYFLAAGAIKGGTVKVTGIGRKSMQGDIRFADVLEKMGATITWGDDFIACTRGELHAIDMDMNHIPDAAMTIA 319
Cdd:COG0128  237 PGDISSAAFFLAAAAITGSEVTVEGVGLNSTQGDTGILDILKEMGADIEIENDGITVRGSPLKGIDIDLSDIPDEAPTLA 316
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 320 TTALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPAKLHHADIGTYNDHRMAMCFSLVAL-SD 398
Cdd:COG0128  317 VLAAFAEGTTRIRGAAELRVKESDRIAAMATELRKLGADVEETEDGLIIEGGPKLKGAEVDSYGDHRIAMAFAVAGLrAE 396
                        410       420
                 ....*....|....*....|....*
gi 446367334 399 TPVTILDPKCTAKTFPDYFEQLARM 423
Cdd:COG0128  397 GPVTIDDAECVAKSFPDFFELLESL 421
EPT-like cd01554
Enol pyruvate transferases family includes EPSP synthases and UDP-N-acetylglucosamine ...
12-423 0e+00

Enol pyruvate transferases family includes EPSP synthases and UDP-N-acetylglucosamine enolpyruvyl transferase. Both enzymes catalyze the reaction of enolpyruvyl transfer.


Pssm-ID: 238795  Cd Length: 408  Bit Score: 546.05  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  12 VDGAINLPGSKSVSNRALLLAALACGKTVLTNLLDSDDVRHMLNALSALGINYTLSAdrTRCDITGNGGALRAPGALELF 91
Cdd:cd01554    1 LHGIIRVPGDKSISHRSLIFASLAEGETKVYNILRGEDVLSTMQVLRDLGVEIEDKD--GVITIQGVGMAGLKAPQNALN 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  92 LGNAGTAMRPLAAALCLGQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEQENYPPLRLRGGFTGGDIEVDGSVSSQ 171
Cdd:cd01554   79 LGNSGTAIRLISGVLAGADFEVELFGDDSLSKRPMDRVTLPLKKMGASISGQEERDLPPLLKGGKNLGPIHYEDPIASAQ 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 172 FLTALLMTAPLAPEDTTIRVKgelVSKPYIDITLNLMKTFGVEITNHHYQQFVVKGGQQYHSPgRYLVEGDASSASYFLA 251
Cdd:cd01554  159 VKSALMFAALLAKGETVIIEA---AKEPTINHTENMLQTFGGHISVQGTKKIVVQGPQKLTGQ-KYVVPGDISSAAFFLV 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 252 AGAIKGGTVKVTGIGRKSmqGDIRFADVLEKMGATITWGDDFIACTRGELHAIDMDMNHIP---DAAMTIATTALFAKGT 328
Cdd:cd01554  235 AAAIAPGRLVLQNVGINE--TRTGIIDVLRAMGAKIEIGEDTISVESSDLKATEICGALIPrliDELPIIALLALQAQGT 312
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 329 TTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPAKLHHADIGTYNDHRMAMCFSLVAL-SDTPVTILDPK 407
Cdd:cd01554  313 TVIKDAEELKVKETDRIFVVADELNSMGADIEPTADGMIIKGKEKLHGARVNTFGDHRIGMMTALAALvADGEVELDRAE 392
                        410
                 ....*....|....*.
gi 446367334 408 CTAKTFPDYFEQLARM 423
Cdd:cd01554  393 AINTSYPSFFDDLESL 408
EPSP_synthase pfam00275
EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase);
7-420 2.29e-162

EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase);


Pssm-ID: 395213  Cd Length: 415  Bit Score: 463.31  E-value: 2.29e-162
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334    7 QPIARVDGAINLPGSKSVSNRALLLAALACGKTVLTNLLDSDDVRHMLNALSALGI-NYTLSADRTRCDITGNGGALRAP 85
Cdd:pfam00275   1 TGGSRLSGEVKIPGSKSNSHRALILAALAAGESTITNLLDSDDTLTMLEALRALGAeIIKLDDEKSVVIVEGLGGSFEAP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334   86 GALELFLGNAGTAMRPLAAALCLGQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEQENYPPLRLRGGfTGGDIEVD 165
Cdd:pfam00275  81 EDLVLDMGNSGTALRPLTGRLALQSGEVVLPGDCSIGKRPMDRLLDALRQLGAEIEGREGYNYAPLKVRGL-RLGGIHID 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  166 GSVSSQFLTALLMTAPLAPEDTTIRVkgELVSKPYIDITLNLMKTFGVEITNHHY-QQFVVKGGQQYHSpGRYLVEGDAS 244
Cdd:pfam00275 160 GDVSSQFVTSLLMLAALLAEGTTTIE--NLASEPYIDDTENMLKKFGAKIEGSGTeLSITVKGGEKLPG-QEYRVEGDRS 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  245 SASYFLAAGAIKGGTVKVTGIGRKSMQGDIRFADVLEKMGATITWGDDF-IACTRGELHAIDMDMNHIPDAAMTIATTAL 323
Cdd:pfam00275 237 SAAYFLVAAAITGGTVTVENVGINSLQGDEALLEILEKMGAEITQEEDAdIVVGPPGLRGKAVDIRTAPDPAPTTAVLAA 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  324 FAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPAK-LHHADIGTYNDHRMAMCFSLVAL-SDTPV 401
Cdd:pfam00275 317 FAEGTTRIEGISELRVKETDRLFAMATELRRLGADVEELPDGLIIIPAVKeLKGAEVDSYGDHRIAMALALAGLvAEGET 396
                         410
                  ....*....|....*....
gi 446367334  402 TILDPKCTAKTFPDYFEQL 420
Cdd:pfam00275 397 IIDDIECTDRSFPDFEEKL 415
aroA TIGR01356
3-phosphoshikimate 1-carboxyvinyltransferase; This model represents ...
14-423 5.06e-159

3-phosphoshikimate 1-carboxyvinyltransferase; This model represents 3-phosphoshikimate-1-carboxyvinyltransferase (aroA), which catalyzes the sixth of seven steps in the shikimate pathway of the biosynthesis of chorimate. Chorismate is last common precursor of all three aromatic amino acids. Sequences scoring between the trusted and noise cutoffs include fragmentary and aberrant sequences in which generally well-conserved motifs are missing or altererd, but no example of a protein known to have a different function. [Amino acid biosynthesis, Aromatic amino acid family]


Pssm-ID: 273574  Cd Length: 409  Bit Score: 454.43  E-value: 5.06e-159
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334   14 GAINLPGSKSVSNRALLLAALACGKTVLTNLLDSDDVRHMLNALSALGINYTLSADRTRcdITGNGGALraPGAlELFLG 93
Cdd:TIGR01356   1 GEIRAPGSKSITHRALILAALAEGETRVRNLLRSEDTLATLDALRALGAKIEDGGEVAV--IEGVGGKE--PQA-ELDLG 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334   94 NAGTAMRPLAAALCLGQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEQENYPPLRLRGGFTGGDIEVDGSVSSQFL 173
Cdd:TIGR01356  76 NSGTTARLLTGVLALADGEVVLTGDESLRKRPMGRLVDALRQLGAEISSLEGGGSLPLTISGPLPGGIVYISGSASSQYK 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  174 TALLMTAPLAPEDTTIRVKGELVSKPYIDITLNLMKTFGVEITNHHYQQFVVKGGQQYHSPGrYLVEGDASSASYFLAAG 253
Cdd:TIGR01356 156 SALLLAAPALQAVGITIVGEPLKSRPYIEITLDLLGSFGVEVERSDGRKIVVPGGQKYGPQG-YDVPGDYSSAAFFLAAA 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  254 AIKGGTVKVTGIGRKSMQGDIRFADVLEKMGATITWGDDFIACTRG-ELHAIDMDMNHIPDAAMTIATTALFAKGTTTLR 332
Cdd:TIGR01356 235 AITGGRVTLENLGINPTQGDKAIIIVLEEMGADIEVEEDDLIVEGAsGLKGIKIDMDDMIDELPTLAVLAAFAEGVTRIT 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  333 NIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPAKLHHADIGTYNDHRMAMCFSLVAL-SDTPVTILDPKCTAK 411
Cdd:TIGR01356 315 GAEELRVKESDRIAAIAEELRKLGVDVEEFEDGLYIRGKKELKGAVVDTFGDHRIAMAFAVAGLvAEGEVLIDDPECVAK 394
                         410
                  ....*....|..
gi 446367334  412 TFPDYFEQLARM 423
Cdd:TIGR01356 395 SFPSFFDVLERL 406
 
Name Accession Description Interval E-value
PRK11860 PRK11860
bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase;
1-427 0e+00

bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase;


Pssm-ID: 237003 [Multi-domain]  Cd Length: 661  Bit Score: 597.03  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334   1 MESLTLQPIARVDGAINLPGSKSVSNRALLLAALACGKTVLTNLLDSDDVRHMLNALSALGINYTLSADRTRcdITGNGG 80
Cdd:PRK11860   4 TEFLDLPPLLSAGGTVRLPGSKSISNRVLLLAALSEGTTTVRDLLDSDDTRVMLDALRALGCGVEQLGDTYR--ITGLGG 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  81 ALRAPGAlELFLGNAGTAMRPLAAALCLGQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEQENYPPLRLRGG--FT 158
Cdd:PRK11860  82 QFPVKQA-DLFLGNAGTAMRPLTAALALLGGEYELSGVPRMHERPIGDLVDALRQLGCDIDYLGNEGFPPLRIGPAplRL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 159 GGDIEVDGSVSSQFLTALLMTAPL-APEDTTIRVKGELVSKPYIDITLNLMKTFGVEITNHHYQQFVVKGGQQYHSPGRY 237
Cdd:PRK11860 161 DAPIRVRGDVSSQFLTALLMALPLvARRDITIEVVGELISKPYIEITLNLLARFGIAVQREGWQRFTIPAGSRYRSPGEI 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 238 LVEGDASSASYFLAAGAIKGGT-VKVTGIGRKSMQGDIRFADVLEKMGATITWGDDFIACTRGE--LHAIDMDMNHIPDA 314
Cdd:PRK11860 241 HVEGDASSASYFIAAGAIAGGApVRIEGVGRDSIQGDIRFAEAARAMGAQVTSGPNWLEVRRGAwpLKAIDLDCNHIPDA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 315 AMTIATTALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPAK---LHHADIGTYNDHRMAMCF 391
Cdd:PRK11860 321 AMTLAVMALYADGTTTLRNIASWRVKETDRIAAMATELRKLGATVEEGADYIRVTPPAQaadWKAAAIHTYDDHRMAMCF 400
                        410       420       430
                 ....*....|....*....|....*....|....*...
gi 446367334 392 SLVAL--SDTPVTILDPKCTAKTFPDYFEQLARMSTPA 427
Cdd:PRK11860 401 SLAAFnpAGLPVRINDPKCVAKTFPDYFEALFSVAQAD 438
AroA COG0128
5-enolpyruvylshikimate-3-phosphate synthase [Amino acid transport and metabolism]; ...
1-423 0e+00

5-enolpyruvylshikimate-3-phosphate synthase [Amino acid transport and metabolism]; 5-enolpyruvylshikimate-3-phosphate synthase is part of the Pathway/BioSystem: Aromatic amino acid biosynthesis


Pssm-ID: 439898  Cd Length: 421  Bit Score: 592.45  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334   1 MESLTLQPIARVDGAINLPGSKSVSNRALLLAALACGKTVLTNLLDSDDVRHMLNALSALGINYTLSaDRTRCDITGNGG 80
Cdd:COG0128    1 MSSLTIAPPSPLKGTVRVPGSKSISHRALLLAALAEGESTIRNLLESDDTLATLEALRALGAEIEEL-DGGTLRVTGVGG 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  81 ALRAPGAlELFLGNAGTAMRPLAAALCLGQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEqENYPPLRLRGG-FTG 159
Cdd:COG0128   80 GLKEPDA-VLDCGNSGTTMRLLTGLLALQPGEVVLTGDESLRKRPMGRLLDPLRQLGARIESRG-GGYLPLTIRGGpLKG 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 160 GDIEVDGSVSSQFLTALLMTAPLAPEDTTIRVKGELVSKPYIDITLNLMKTFGVEITNHHYQQFVVKGGQQYHsPGRYLV 239
Cdd:COG0128  158 GEYEIPGSASSQFKSALLLAGPLAEGGLEITVTGELESKPYRDHTERMLRAFGVEVEVEGYRRFTVPGGQRYR-PGDYTV 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 240 EGDASSASYFLAAGAIKGGTVKVTGIGRKSMQGDIRFADVLEKMGATITWGDDFIACTRGELHAIDMDMNHIPDAAMTIA 319
Cdd:COG0128  237 PGDISSAAFFLAAAAITGSEVTVEGVGLNSTQGDTGILDILKEMGADIEIENDGITVRGSPLKGIDIDLSDIPDEAPTLA 316
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 320 TTALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPAKLHHADIGTYNDHRMAMCFSLVAL-SD 398
Cdd:COG0128  317 VLAAFAEGTTRIRGAAELRVKESDRIAAMATELRKLGADVEETEDGLIIEGGPKLKGAEVDSYGDHRIAMAFAVAGLrAE 396
                        410       420
                 ....*....|....*....|....*
gi 446367334 399 TPVTILDPKCTAKTFPDYFEQLARM 423
Cdd:COG0128  397 GPVTIDDAECVAKSFPDFFELLESL 421
PRK02427 PRK02427
3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
1-424 0e+00

3-phosphoshikimate 1-carboxyvinyltransferase; Provisional


Pssm-ID: 235037 [Multi-domain]  Cd Length: 435  Bit Score: 575.94  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334   1 MESLTLQPIARVDGAINLPGSKSVSNRALLLAALACGKTVLTNLLDSDDVRHMLNALSALGINYtlsaDRTRCDITGNGG 80
Cdd:PRK02427   2 MMMLLIIPPSPLSGTVRVPGSKSISHRALLLAALAEGETTITNLLRSEDTLATLNALRALGVEI----EDDEVVVEGVGG 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  81 ALRAPGALELFLGNAGTAMRPLAAALCLGQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYlEQENYPPLRLRGGFTGG 160
Cdd:PRK02427  78 GGLKEPEDVLDCGNSGTTMRLLTGLLALQPGEVVLTGDESLRKRPMGRLLDPLRQMGAKIEG-RDEGYLPLTIRGGKKGG 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 161 DIEVDGSVSSQFLTALLMTAPL-APEDTTIRVKGELVSKPYIDITLNLMKTFGVEITNH---HYQQFVVKGGQQYHsPGR 236
Cdd:PRK02427 157 PIEYDGPVSSQFVKSLLLLAPLfAEGDTETTVIEPLPSRPHTEITLRMLRAFGVEVENVegwGYRRIVIKGGQRLR-GQD 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 237 YLVEGDASSASYFLAAGAIKGG-TVKVTGIGRKSMQGDIRFADVLEKMGATITWGDDF--------IACTRGELHAIDMD 307
Cdd:PRK02427 236 ITVPGDPSSAAFFLAAAAITGGsEVTITNVGLNSTQGGKAIIDVLEKMGADIEIENEReggepvgdIRVRSSELKGIDID 315
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 308 MNHIPDAAMTIATTALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPAKlhHADIGTYNDHRM 387
Cdd:PRK02427 316 IPDIIDEAPTLAVLAAFAEGTTVIRNAEELRVKETDRIAAMATELRKLGAEVEETEDGLIITGGPL--AGVVDSYGDHRI 393
                        410       420       430
                 ....*....|....*....|....*....|....*...
gi 446367334 388 AMCFSLVAL-SDTPVTILDPKCTAKTFPDYFEQLARMS 424
Cdd:PRK02427 394 AMAFAIAGLaAEGPVTIDDPECVAKSFPDFFEDLASLG 431
PLN02338 PLN02338
3-phosphoshikimate 1-carboxyvinyltransferase
1-425 0e+00

3-phosphoshikimate 1-carboxyvinyltransferase


Pssm-ID: 177972 [Multi-domain]  Cd Length: 443  Bit Score: 550.12  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334   1 MESLTLQPIARVDGAINLPGSKSVSNRALLLAALACGKTVLTNLLDSDDVRHMLNALSALGINYTLSADRTRCDITGNGG 80
Cdd:PLN02338   1 AEEITLQPIKEISGTVKLPGSKSLSNRILLLAALSEGTTVVDNLLDSDDIRYMLGALKTLGLNVEEDSENNRAVVEGCGG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  81 ALRAPGA----LELFLGNAGTAMRPLAAALCL--GQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEQENYPPLRL- 153
Cdd:PLN02338  81 KFPVSGDskedVELFLGNAGTAMRPLTAAVTAagGNASYVLDGVPRMRERPIGDLVDGLKQLGADVECTLGTNCPPVRVn 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 154 -RGGFTGGDIEVDGSVSSQFLTALLMTAPLAPEDTTIRVKGELVSKPYIDITLNLMKTFGVEITNHH-YQQFVVKGGQQY 231
Cdd:PLN02338 161 aAGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIVDKLISVPYVEMTLKLMERFGVSVEHSDsWDRFFIKGGQKY 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 232 HSPGRYLVEGDASSASYFLAAGAIKGGTVKVTGIGRKSMQGDIRFADVLEKMGATITWGDDFIACTR--------GELHA 303
Cdd:PLN02338 241 KSPGNAYVEGDASSASYFLAGAAITGGTVTVEGCGTTSLQGDVKFAEVLEKMGAKVEWTENSVTVTGpprdafggKHLKA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 304 IDMDMNHIPDAAMTIATTALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPAKLHHADIGTYN 383
Cdd:PLN02338 321 IDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCIITPPKKLKPAEIDTYD 400
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|..
gi 446367334 384 DHRMAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLARMST 425
Cdd:PLN02338 401 DHRMAMAFSLAACGDVPVTINDPGCTRKTFPTYFDVLESIAK 442
EPT-like cd01554
Enol pyruvate transferases family includes EPSP synthases and UDP-N-acetylglucosamine ...
12-423 0e+00

Enol pyruvate transferases family includes EPSP synthases and UDP-N-acetylglucosamine enolpyruvyl transferase. Both enzymes catalyze the reaction of enolpyruvyl transfer.


Pssm-ID: 238795  Cd Length: 408  Bit Score: 546.05  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  12 VDGAINLPGSKSVSNRALLLAALACGKTVLTNLLDSDDVRHMLNALSALGINYTLSAdrTRCDITGNGGALRAPGALELF 91
Cdd:cd01554    1 LHGIIRVPGDKSISHRSLIFASLAEGETKVYNILRGEDVLSTMQVLRDLGVEIEDKD--GVITIQGVGMAGLKAPQNALN 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  92 LGNAGTAMRPLAAALCLGQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEQENYPPLRLRGGFTGGDIEVDGSVSSQ 171
Cdd:cd01554   79 LGNSGTAIRLISGVLAGADFEVELFGDDSLSKRPMDRVTLPLKKMGASISGQEERDLPPLLKGGKNLGPIHYEDPIASAQ 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 172 FLTALLMTAPLAPEDTTIRVKgelVSKPYIDITLNLMKTFGVEITNHHYQQFVVKGGQQYHSPgRYLVEGDASSASYFLA 251
Cdd:cd01554  159 VKSALMFAALLAKGETVIIEA---AKEPTINHTENMLQTFGGHISVQGTKKIVVQGPQKLTGQ-KYVVPGDISSAAFFLV 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 252 AGAIKGGTVKVTGIGRKSmqGDIRFADVLEKMGATITWGDDFIACTRGELHAIDMDMNHIP---DAAMTIATTALFAKGT 328
Cdd:cd01554  235 AAAIAPGRLVLQNVGINE--TRTGIIDVLRAMGAKIEIGEDTISVESSDLKATEICGALIPrliDELPIIALLALQAQGT 312
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 329 TTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPAKLHHADIGTYNDHRMAMCFSLVAL-SDTPVTILDPK 407
Cdd:cd01554  313 TVIKDAEELKVKETDRIFVVADELNSMGADIEPTADGMIIKGKEKLHGARVNTFGDHRIGMMTALAALvADGEVELDRAE 392
                        410
                 ....*....|....*.
gi 446367334 408 CTAKTFPDYFEQLARM 423
Cdd:cd01554  393 AINTSYPSFFDDLESL 408
EPSP_synthase cd01556
EPSP synthase domain. 3-phosphoshikimate 1-carboxyvinyltransferase ...
12-423 0e+00

EPSP synthase domain. 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-phosphate synthase) (EC 2.5.1.19) catalyses the reaction between shikimate-3-phosphate (S3P) and phosphoenolpyruvate (PEP) to form 5-enolpyruvylshkimate-3-phosphate (EPSP), an intermediate in the shikimate pathway leading to aromatic amino acid biosynthesis. The reaction is phosphoenolpyruvate + 3-phosphoshikimate = phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate. It is found in bacteria and plants but not animals. The enzyme is the target of the widely used herbicide glyphosate, which has been shown to occupy the active site. In bacteria and plants, it is a single domain protein, while in fungi, the domain is found as part of a multidomain protein with functions that are all part of the shikimate pathway.


Pssm-ID: 238797  Cd Length: 409  Bit Score: 532.52  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  12 VDGAINLPGSKSVSNRALLLAALACGKTVLTNLLDSDDVRHMLNALSALGINYTLSADRtrCDITGNGGALRAPGAlELF 91
Cdd:cd01556    1 LSGEITVPGSKSISHRALLLAALAEGESRIENLLDSDDTLATLEALRALGAKIEEEGGT--VEIVGGGGLGLPPEA-VLD 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  92 LGNAGTAMRPLAAALCLGQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEQENYPPLRLRGGFTGGDIEVDGSVSSQ 171
Cdd:cd01556   78 CGNSGTTMRLLTGLLALQGGDSVLTGDESLRKRPMGRLVDALRQLGAEIEGREGGGYPPLIGGGGLKGGEVEIPGAVSSQ 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 172 FLTALLMTAPLAPEDTTIRVkGELVSKPYIDITLNLMKTFGVEITNHHYQQFVVKGGQQYHSPgRYLVEGDASSASYFLA 251
Cdd:cd01556  158 FKSALLLAAPLAEGPTTIII-GELESKPYIDHTERMLRAFGAEVEVDGYRTITVKGGQKYKGP-EYTVEGDASSAAFFLA 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 252 AGAIKGGTVKVTGIGRKSmqGDIRFADVLEKMGATITWGD-DFIACTR-GELHAIDMDMNHIPDAAMTIATTALFAKGTT 329
Cdd:cd01556  236 AAAITGSEIVIKNVGLNS--GDTGIIDVLKEMGADIEIGNeDTVVVESgGKLKGIDIDGNDIPDEAPTLAVLAAFAEGPT 313
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 330 TLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITP-PAKLHHADIGTYNDHRMAMCFSLVAL-SDTPVTILDPK 407
Cdd:cd01556  314 RIRNAAELRVKESDRIAAMATELRKLGADVEETEDGLIIEGgPLKGAGVEVYTYGDHRIAMSFAIAGLvAEGGVTIEDPE 393
                        410
                 ....*....|....*.
gi 446367334 408 CTAKTFPDYFEQLARM 423
Cdd:cd01556  394 CVAKSFPNFFEDLESL 409
EPSP_synthase pfam00275
EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase);
7-420 2.29e-162

EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase);


Pssm-ID: 395213  Cd Length: 415  Bit Score: 463.31  E-value: 2.29e-162
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334    7 QPIARVDGAINLPGSKSVSNRALLLAALACGKTVLTNLLDSDDVRHMLNALSALGI-NYTLSADRTRCDITGNGGALRAP 85
Cdd:pfam00275   1 TGGSRLSGEVKIPGSKSNSHRALILAALAAGESTITNLLDSDDTLTMLEALRALGAeIIKLDDEKSVVIVEGLGGSFEAP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334   86 GALELFLGNAGTAMRPLAAALCLGQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEQENYPPLRLRGGfTGGDIEVD 165
Cdd:pfam00275  81 EDLVLDMGNSGTALRPLTGRLALQSGEVVLPGDCSIGKRPMDRLLDALRQLGAEIEGREGYNYAPLKVRGL-RLGGIHID 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  166 GSVSSQFLTALLMTAPLAPEDTTIRVkgELVSKPYIDITLNLMKTFGVEITNHHY-QQFVVKGGQQYHSpGRYLVEGDAS 244
Cdd:pfam00275 160 GDVSSQFVTSLLMLAALLAEGTTTIE--NLASEPYIDDTENMLKKFGAKIEGSGTeLSITVKGGEKLPG-QEYRVEGDRS 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  245 SASYFLAAGAIKGGTVKVTGIGRKSMQGDIRFADVLEKMGATITWGDDF-IACTRGELHAIDMDMNHIPDAAMTIATTAL 323
Cdd:pfam00275 237 SAAYFLVAAAITGGTVTVENVGINSLQGDEALLEILEKMGAEITQEEDAdIVVGPPGLRGKAVDIRTAPDPAPTTAVLAA 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  324 FAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPAK-LHHADIGTYNDHRMAMCFSLVAL-SDTPV 401
Cdd:pfam00275 317 FAEGTTRIEGISELRVKETDRLFAMATELRRLGADVEELPDGLIIIPAVKeLKGAEVDSYGDHRIAMALALAGLvAEGET 396
                         410
                  ....*....|....*....
gi 446367334  402 TILDPKCTAKTFPDYFEQL 420
Cdd:pfam00275 397 IIDDIECTDRSFPDFEEKL 415
aroA TIGR01356
3-phosphoshikimate 1-carboxyvinyltransferase; This model represents ...
14-423 5.06e-159

3-phosphoshikimate 1-carboxyvinyltransferase; This model represents 3-phosphoshikimate-1-carboxyvinyltransferase (aroA), which catalyzes the sixth of seven steps in the shikimate pathway of the biosynthesis of chorimate. Chorismate is last common precursor of all three aromatic amino acids. Sequences scoring between the trusted and noise cutoffs include fragmentary and aberrant sequences in which generally well-conserved motifs are missing or altererd, but no example of a protein known to have a different function. [Amino acid biosynthesis, Aromatic amino acid family]


Pssm-ID: 273574  Cd Length: 409  Bit Score: 454.43  E-value: 5.06e-159
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334   14 GAINLPGSKSVSNRALLLAALACGKTVLTNLLDSDDVRHMLNALSALGINYTLSADRTRcdITGNGGALraPGAlELFLG 93
Cdd:TIGR01356   1 GEIRAPGSKSITHRALILAALAEGETRVRNLLRSEDTLATLDALRALGAKIEDGGEVAV--IEGVGGKE--PQA-ELDLG 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334   94 NAGTAMRPLAAALCLGQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEQENYPPLRLRGGFTGGDIEVDGSVSSQFL 173
Cdd:TIGR01356  76 NSGTTARLLTGVLALADGEVVLTGDESLRKRPMGRLVDALRQLGAEISSLEGGGSLPLTISGPLPGGIVYISGSASSQYK 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  174 TALLMTAPLAPEDTTIRVKGELVSKPYIDITLNLMKTFGVEITNHHYQQFVVKGGQQYHSPGrYLVEGDASSASYFLAAG 253
Cdd:TIGR01356 156 SALLLAAPALQAVGITIVGEPLKSRPYIEITLDLLGSFGVEVERSDGRKIVVPGGQKYGPQG-YDVPGDYSSAAFFLAAA 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  254 AIKGGTVKVTGIGRKSMQGDIRFADVLEKMGATITWGDDFIACTRG-ELHAIDMDMNHIPDAAMTIATTALFAKGTTTLR 332
Cdd:TIGR01356 235 AITGGRVTLENLGINPTQGDKAIIIVLEEMGADIEVEEDDLIVEGAsGLKGIKIDMDDMIDELPTLAVLAAFAEGVTRIT 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  333 NIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPAKLHHADIGTYNDHRMAMCFSLVAL-SDTPVTILDPKCTAK 411
Cdd:TIGR01356 315 GAEELRVKESDRIAAIAEELRKLGVDVEEFEDGLYIRGKKELKGAVVDTFGDHRIAMAFAVAGLvAEGEVLIDDPECVAK 394
                         410
                  ....*....|..
gi 446367334  412 TFPDYFEQLARM 423
Cdd:TIGR01356 395 SFPSFFDVLERL 406
PRK11861 PRK11861
bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
1-424 1.92e-154

bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; Provisional


Pssm-ID: 183343 [Multi-domain]  Cd Length: 673  Bit Score: 452.62  E-value: 1.92e-154
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334   1 MESLTLQPIARVDGAINLPGSKSVSNRALLLAALACGKTVLTNLLDSDDVRHMLNALSALGINytLSADRTRCDITGNGG 80
Cdd:PRK11861 240 MEHLDLGPFSHAQGTVRLPGSKSISNRVLLLAALAEGETTVTNLLDSDDTRVMLDALTKLGVK--LSRDGGTCVVGGTRG 317
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  81 ALRAPGAlELFLGNAGTAMRPLAAALCLGQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEQENYPPLRLRGGFTGG 160
Cdd:PRK11861 318 AFTAKTA-DLFLGNAGTAVRPLTAALAVNGGEYRIHGVPRMHERPIGDLVDGLRQIGARIDYEGNEGFPPLRIRPATISV 396
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 161 D--IEVDGSVSSQFLTALLMTAPLAPED---TTIRVKGELVSKPYIDITLNLMKTFGVEITNHHYQQFVVKGGQQYHSPG 235
Cdd:PRK11861 397 DapIRVRGDVSSQFLTALLMTLPLVKAKdgaSVVEIDGELISKPYIEITIKLMARFGVTVERDGWQRFTVPAGVRYRSPG 476
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 236 RYLVEGDASSASYFLAAGAIKGGTVKVTGIGRKSMQGDIRFADVLEKMGATITWGDDFIAC-----TRGELHAIDMDMNH 310
Cdd:PRK11861 477 TIMVEGDASSASYFLAAGALGGGPLRVEGVGRASIQGDVGFANALMQMGANVTMGDDWIEVrgighDHGRLAPIDMDFNL 556
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 311 IPDAAMTIATTALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPAKLH-HADIGTYNDHRMAM 389
Cdd:PRK11861 557 IPDAAMTIAVAALFADGPSTLRNIGSWRVKETDRIAAMATELRKVGATVEEGADYLVVTPPAQLTpNASIDTYDDHRMAM 636
                        410       420       430
                 ....*....|....*....|....*....|....*
gi 446367334 390 CFSLVALSDTPVTILDPKCTAKTFPDYFEQLARMS 424
Cdd:PRK11861 637 CFSLVSLGGVPVRINDPKCVGKTFPDYFDRFLALA 671
EPT_RTPC-like cd01553
This domain family includes the Enolpyruvate transferase (EPT) family and the RNA 3' phosphate ...
240-423 1.67e-55

This domain family includes the Enolpyruvate transferase (EPT) family and the RNA 3' phosphate cyclase family (RTPC). These 2 families differ in that EPT is formed by 3 repeats of an alpha-beta structural domain while RTPC has 3 similar repeats with a 4th slightly different domain inserted between the 2nd and 3rd repeat. They evidently share the same active site location, although the catalytic residues differ.


Pssm-ID: 238794  Cd Length: 211  Bit Score: 182.86  E-value: 1.67e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 240 EGDASSASYFLAAGAIKGGTVKVTGIGRKSM-----QGDIRFADVLEKM-GATITWG---DDFIACTRGELHAIDMDMNH 310
Cdd:cd01553    7 KGGGQILRSFLVLAAISGGPITVTGIRPDRAkpgllRQHLTFLKALEKIcGATVEGGelgSDRISFRPGTVRGGDVRFAI 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 311 -----IPDAAMTIATTALFAKGTTTLRNIYNWRV----KETDRLFAMATELRKVGAEVEEGHD------------YIRIT 369
Cdd:cd01553   87 gsagsCTDVLQTILPLLLFAKGPTRLTVTGGTDNpsapPADFIRFVLEPELAKIGAHQEETLLrhgfypagggvvATEVS 166
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 446367334 370 PPAKLHHADIgtyndhRMAMCFSLVAlsdTPVTILDPKCTAKTFPDYFEQLARM 423
Cdd:cd01553  167 PVEKLNTAQL------RQLVLPMLLA---SGAVEFTVAHPSCHLLTNFAVLEAL 211
PRK14806 PRK14806
bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; ...
3-422 2.02e-36

bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional


Pssm-ID: 237820 [Multi-domain]  Cd Length: 735  Bit Score: 141.67  E-value: 2.02e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334   3 SLTLQPIARVDGAINLPGSKSVSNRALLLAALACGKTVLTNLLDSDDVRHMLNALSALGINYT-LSADRTRcdITGNG-G 80
Cdd:PRK14806 303 SYSVLPGGAVKGTIRVPGDKSISHRSIMLGSLAEGVTEVEGFLEGEDALATLQAFRDMGVVIEgPHNGRVT--IHGVGlH 380
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  81 ALRAPGAlELFLGNAGTAMRPLAAALCLGQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDyLEQENYPPLRLRGGFTGG 160
Cdd:PRK14806 381 GLKAPPG-PLYMGNSGTSMRLLSGLLAAQSFDSVLTGDASLSKRPMERVAKPLREMGAVIE-TGEEGRPPLSIRGGQRLK 458
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 161 DIEVDGSV-SSQFLTALLMTAPLAPEDTTIRvkgELvsKPYIDITLNLMKTFGVEITNHHYQQFVVKGGQQyhSPGRYLV 239
Cdd:PRK14806 459 GIHYDLPMaSAQVKSCLLLAGLYAEGETSVT---EP--APTRDHTERMLRGFGYPVKVEGNTISVEGGGKL--TATDIEV 531
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 240 EGDASSASYFLAAGAIKGG---TVKVTGIGRKSmqgdIRFADVLEKMGATIT------WGDDFIACTR---GELHAIDMD 307
Cdd:PRK14806 532 PADISSAAFFLVAASIAEGselTLEHVGINPTR----TGVIDILKLMGADITlenereVGGEPVADIRvrgARLKGIDIP 607
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 308 MNHIPDA-----AMTIAttALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITpPAKLHHADIGTY 382
Cdd:PRK14806 608 EDQVPLAidefpVLFVA--AACAEGRTVLTGAEELRVKESDRIQVMADGLKTLGIDCEPTPDGIIIE-GGIFGGGEVESH 684
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|.
gi 446367334 383 NDHRMAMCFSLVAL-SDTPVTILDPKCTAKTFPDyFEQLAR 422
Cdd:PRK14806 685 GDHRIAMSFSVASLrASGPITIHDCANVATSFPN-FLELAN 724
MurA COG0766
UDP-N-acetylglucosamine enolpyruvyl transferase [Cell wall/membrane/envelope biogenesis]; ...
37-379 4.62e-13

UDP-N-acetylglucosamine enolpyruvyl transferase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylglucosamine enolpyruvyl transferase is part of the Pathway/BioSystem: Mureine biosynthesis


Pssm-ID: 440529  Cd Length: 416  Bit Score: 70.40  E-value: 4.62e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  37 GKTVLTNLLDSDDVRHMLNALSALGINYTLSADRTrcdITGNGGALR---APGALelflgnaGTAMRplAAALCLGqnei 113
Cdd:COG0766   37 GPVTLRNVPDLSDVRTMLELLESLGVKVERDDGGT---LTIDASNINsteAPYEL-------VRKMR--ASILVLG---- 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 114 VLTGepRMKE-------------RPIG-HLvDSLRQGGANIDYlEQENYpplRLR-GGFTGGDIEVDG-SVssqflTA-- 175
Cdd:COG0766  101 PLLA--RFGEarvslpggcaigaRPIDlHL-KGLEALGAEIEI-EHGYI---EARaGRLKGARIYLDFpSV-----GAte 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 176 -LLMTAPLAPEDTTIrvkgELVSK-PYID--IT-LNLMktfGVEI----TNHhyqqFVVKGGQQYHsPGRYLVEGD---A 243
Cdd:COG0766  169 nIMMAAVLAEGTTVI----ENAARePEIVdlANfLNAM---GAKIegagTDT----ITIEGVEKLH-GAEHTVIPDrieA 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 244 SSasyFLAAGAIKGGTVKVTGIGRKSMQGdirFADVLEKMGATITWGDDFIACTR-GELHAIDM----------DMNHIp 312
Cdd:COG0766  237 GT---FLVAAAITGGDVTVKNVIPEHLEA---VLAKLREAGVEIEEGDDGIRVRGpGRLKAVDIktapypgfptDLQAQ- 309
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446367334 313 daAMTIATTalfAKGTTTLR-NIYNWRvketdrlFAMATELRKVGAEVE-EGHdYIRITPPAKLHHADI 379
Cdd:COG0766  310 --FMALLTQ---AEGTSVITeTVFENR-------FMHVDELNRMGADIKlDGH-TAIVRGVTKLSGAPV 365
UdpNAET cd01555
UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the ...
37-379 1.73e-10

UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the first step in the biosynthesis of peptidoglycan, a component of the bacterial cell wall. The reaction is phosphoenolpyruvate + UDP-N-acetyl-D-glucosamine = phosphate + UDP-N-acetyl-3-(1-carboxyvinyl)-D-glucosamine. This enzyme is of interest as a potential target for anti-bacterial agents. The only other known enolpyruvyl transferase is the related 5-enolpyruvylshikimate-3-phosphate synthase.


Pssm-ID: 238796  Cd Length: 400  Bit Score: 62.49  E-value: 1.73e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  37 GKTVLTNLLDSDDVRHMLNALSALGINYTLSADRTRCDITGNGGALRAPGALE-------LFLGnagtamrPLAAAlcLG 109
Cdd:cd01555   26 EPVTLRNVPDLLDVETMIELLRSLGAKVEFEGENTLVIDASNINSTEAPYELVrkmrasiLVLG-------PLLAR--FG 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 110 QNEIVLTGEPRMKERPIG-HLVdSLRQGGANIDylEQENYPPLRLRGGFTGGDIEVD-GSVssqflTA---LLMTAPLAP 184
Cdd:cd01555   97 EARVSLPGGCAIGARPVDlHLK-GLEALGAKIE--IEDGYVEAKAAGRLKGARIYLDfPSV-----GAtenIMMAAVLAE 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 185 EDTTIRvkgELVSKPYIDITLNLMKTFGVEITNHHYQQFVVKGGQQYHsPGRYLVEGDASSASYFLAAGAIKGGTVKVTG 264
Cdd:cd01555  169 GTTVIE---NAAREPEIVDLANFLNKMGAKIEGAGTDTIRIEGVERLH-GAEHTVIPDRIEAGTFLVAAAITGGDITVEN 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 265 IGRKSMqgdIRFADVLEKMGATITWGDDFIACTR--GELHAIDMDMNHIP----DAAMTIATTALFAKGTTTLR-NIYNW 337
Cdd:cd01555  245 VIPEHL---EAVLAKLREMGAKIEIGEDGIRVDGdgGRLKAVDIETAPYPgfptDLQAQFMALLTQAEGTSVITeTIFEN 321
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....
gi 446367334 338 RvketdrlFAMATELRKVGA--EVEEGHdyIRITPPAKLHHADI 379
Cdd:cd01555  322 R-------FMHVDELNRMGAdiKVEGNT--AIIRGVTKLSGAPV 356
PRK09369 PRK09369
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated
37-379 2.45e-06

UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated


Pssm-ID: 236486  Cd Length: 417  Bit Score: 49.26  E-value: 2.45e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334  37 GKTVLTNLLDSDDVRHMLNALSALGINYTLSADRTrCDITGNG-----------GALRAPgalELFLGnagtamrPLAAA 105
Cdd:PRK09369  37 EPVTLTNVPDLSDVRTMIELLRSLGAKVEFDGNGT-VTIDASNinnteapyelvKKMRAS---ILVLG-------PLLAR 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 106 LclGQNEIVLTGEPRMKERPIG-HLvDSLRQGGANIDylEQENYPPLRLRGGFTGGDIEVDG-SVssqflTA---LLMTA 180
Cdd:PRK09369 106 F--GEAKVSLPGGCAIGARPVDlHL-KGLEALGAEIE--IEHGYVEAKADGRLKGAHIVLDFpSV-----GAtenILMAA 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 181 PLAPEDTTIR-VKGElvskPYI-DIT--LNLMktfGVEITNHHYQQFVVKGGQQYHsPGRYLVEGDASSASYFLAAGAIK 256
Cdd:PRK09369 176 VLAEGTTVIEnAARE----PEIvDLAnfLNKM---GAKISGAGTDTITIEGVERLH-GAEHTVIPDRIEAGTFLVAAAIT 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 257 GGTVKVTGIGRKSMQGdirFADVLEKMGATITWGDDFIACTR-GELHAIDM----------DMNHIpdaAMTIATTalfA 325
Cdd:PRK09369 248 GGDVTIRGARPEHLEA---VLAKLREAGAEIEEGEDGIRVDMpGRLKAVDIktapypgfptDMQAQ---FMALLTQ---A 318
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446367334 326 KGTTTlrniynwrVKET---DRLFaMATELRKVGAEVE-EGHDYIrITPPAKLHHADI 379
Cdd:PRK09369 319 EGTSV--------ITETifeNRFM-HVPELIRMGADIEvDGHTAV-VRGVEKLSGAPV 366
UdpNAET cd01555
UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the ...
160-375 1.67e-05

UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the first step in the biosynthesis of peptidoglycan, a component of the bacterial cell wall. The reaction is phosphoenolpyruvate + UDP-N-acetyl-D-glucosamine = phosphate + UDP-N-acetyl-3-(1-carboxyvinyl)-D-glucosamine. This enzyme is of interest as a potential target for anti-bacterial agents. The only other known enolpyruvyl transferase is the related 5-enolpyruvylshikimate-3-phosphate synthase.


Pssm-ID: 238796  Cd Length: 400  Bit Score: 46.70  E-value: 1.67e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 160 GDIEVDGSVSSqfLTALLMTAPLAPEDTTIRVKGELVSkpyIDITLNLMKTFGVEITNHHYQQFVV--KGGQQYHSPGRY 237
Cdd:cd01555    3 GEVRISGAKNA--ALPILAAALLTDEPVTLRNVPDLLD---VETMIELLRSLGAKVEFEGENTLVIdaSNINSTEAPYEL 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 238 lvegdASS--ASyFLAAGAI--KGGTVKVTG-----IGRKSMQGDIRfadVLEKMGATITWGDDFI-ACTRGELHA--ID 305
Cdd:cd01555   78 -----VRKmrAS-ILVLGPLlaRFGEARVSLpggcaIGARPVDLHLK---GLEALGAKIEIEDGYVeAKAAGRLKGarIY 148
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446367334 306 MDMnhiPD--AAMTIATTALFAKGTTTLRNIYnwrvKE---TDrlfaMATELRKVGAEVE-EGHDYIRITPPAKLH 375
Cdd:cd01555  149 LDF---PSvgATENIMMAAVLAEGTTVIENAA----REpeiVD----LANFLNKMGAKIEgAGTDTIRIEGVERLH 213
MurA COG0766
UDP-N-acetylglucosamine enolpyruvyl transferase [Cell wall/membrane/envelope biogenesis]; ...
277-381 1.83e-05

UDP-N-acetylglucosamine enolpyruvyl transferase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylglucosamine enolpyruvyl transferase is part of the Pathway/BioSystem: Mureine biosynthesis


Pssm-ID: 440529  Cd Length: 416  Bit Score: 46.52  E-value: 1.83e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 277 ADVLEKMGATITW-GDDFIACT-RGELHAIDMDMnhIPD--AAMTIATTALFAKGTTTLRNIynwrvkETDRLFAMATEL 352
Cdd:COG0766  196 ANFLNAMGAKIEGaGTDTITIEgVEKLHGAEHTV--IPDriEAGTFLVAAAITGGDVTVKNV------IPEHLEAVLAKL 267
                         90       100
                 ....*....|....*....|....*....
gi 446367334 353 RKVGAEVEEGHDYIRITPPAKLHHADIGT 381
Cdd:COG0766  268 REAGVEIEEGDDGIRVRGPGRLKAVDIKT 296
MurA COG0766
UDP-N-acetylglucosamine enolpyruvyl transferase [Cell wall/membrane/envelope biogenesis]; ...
278-382 3.79e-05

UDP-N-acetylglucosamine enolpyruvyl transferase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylglucosamine enolpyruvyl transferase is part of the Pathway/BioSystem: Mureine biosynthesis


Pssm-ID: 440529  Cd Length: 416  Bit Score: 45.75  E-value: 3.79e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 278 DVLEKMGATITWGDDFIACTRGELHA--IDMDM-------NhipdaAMTIATtalFAKGTTTLRNIynwrvketdrlfam 348
Cdd:COG0766  129 KGLEALGAEIEIEHGYIEARAGRLKGarIYLDFpsvgateN-----IMMAAV---LAEGTTVIENA-------------- 186
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 446367334 349 ATE---------LRKVGAEVE-EGHDYIRITPPAKLHHAD---------IGTY 382
Cdd:COG0766  187 AREpeivdlanfLNAMGAKIEgAGTDTITIEGVEKLHGAEhtvipdrieAGTF 239
PRK12830 PRK12830
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Reviewed
236-377 1.01e-04

UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Reviewed


Pssm-ID: 183779  Cd Length: 417  Bit Score: 44.46  E-value: 1.01e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 236 RYLVEGDASSASYFLAAGAIKGGTVKVTGIGRKSMQGdirFADVLEKMGATITWGDDFI-ACTRGELHAIDMDMNHIP-- 312
Cdd:PRK12830 225 RHTVIPDRIEAGTYMILAAACGGGVTINNVIPEHLES---FIAKLEEMGVRVEVNEDSIfVEKQGNLKAVDIKTLPYPgf 301
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446367334 313 --DAAMTIATTALFAKGTTTLR-NIYNWRVKETDrlfamatELRKVGAEVEEGHDYIRITPPAKLHHA 377
Cdd:PRK12830 302 atDLQQPLTPLLLKANGRSVVTdTIYEKRFKHVD-------ELKRMGANIKVEGRSAIITGPSKLTGA 362
PRK09369 PRK09369
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated
277-381 2.54e-04

UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated


Pssm-ID: 236486  Cd Length: 417  Bit Score: 43.10  E-value: 2.54e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446367334 277 ADVLEKMGATIT-WGDDFI---------ACTrgelHAIdmdmnhIPD----------AAMTiattalfaKGTTTLRNIyn 336
Cdd:PRK09369 197 ANFLNKMGAKISgAGTDTItiegverlhGAE----HTV------IPDrieagtflvaAAIT--------GGDVTIRGA-- 256
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 446367334 337 wrvkETDRLFAMATELRKVGAEVEEGHDYIRITPPAKLHHADIGT 381
Cdd:PRK09369 257 ----RPEHLEAVLAKLREAGAEIEEGEDGIRVDMPGRLKAVDIKT 297
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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