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Conserved domains on  [gi|446371337|ref|WP_000449192|]
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MULTISPECIES: cell division inhibition protein DicB [Enterobacteriaceae]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DicB super family cl05098
DicB protein; DicB is part of the dic operon, which resides on cryptic prophage Kim. Under ...
 1-62 1.04e-34

DicB protein; DicB is part of the dic operon, which resides on cryptic prophage Kim. Under normal conditions, expression of dicB is actively repressed. When expression is induced, however, cell division rapidly ceases, and this division block is dependent on MinC with which it interacts.


The actual alignment was detected with superfamily member pfam05358:

Pssm-ID: 283105  Cd Length: 62  Bit Score: 111.74  E-value: 1.04e-34
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446371337   1 METLLPNVNTSEGCFEIGVTISNPVFTEDAINKRKHERELLNKICILSMLARLRPIQKGCWQ 62
Cdd:pfam05358  1 MKTLLPNVNTSEGCFEIGVTISNPVFTEDAINKRKQERELLNKICIVSMLARLRLMPKGCAQ 62
 
Name Accession Description Interval E-value
DicB pfam05358
DicB protein; DicB is part of the dic operon, which resides on cryptic prophage Kim. Under ...
 1-62 1.04e-34

DicB protein; DicB is part of the dic operon, which resides on cryptic prophage Kim. Under normal conditions, expression of dicB is actively repressed. When expression is induced, however, cell division rapidly ceases, and this division block is dependent on MinC with which it interacts.


Pssm-ID: 283105  Cd Length: 62  Bit Score: 111.74  E-value: 1.04e-34
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446371337   1 METLLPNVNTSEGCFEIGVTISNPVFTEDAINKRKHERELLNKICILSMLARLRPIQKGCWQ 62
Cdd:pfam05358  1 MKTLLPNVNTSEGCFEIGVTISNPVFTEDAINKRKQERELLNKICIVSMLARLRLMPKGCAQ 62
 
Name Accession Description Interval E-value
DicB pfam05358
DicB protein; DicB is part of the dic operon, which resides on cryptic prophage Kim. Under ...
 1-62 1.04e-34

DicB protein; DicB is part of the dic operon, which resides on cryptic prophage Kim. Under normal conditions, expression of dicB is actively repressed. When expression is induced, however, cell division rapidly ceases, and this division block is dependent on MinC with which it interacts.


Pssm-ID: 283105  Cd Length: 62  Bit Score: 111.74  E-value: 1.04e-34
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446371337   1 METLLPNVNTSEGCFEIGVTISNPVFTEDAINKRKHERELLNKICILSMLARLRPIQKGCWQ 62
Cdd:pfam05358  1 MKTLLPNVNTSEGCFEIGVTISNPVFTEDAINKRKQERELLNKICIVSMLARLRLMPKGCAQ 62
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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