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Conserved domains on  [gi|446377636|ref|WP_000455491|]
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MULTISPECIES: YppE family protein [Bacillus]

Protein Classification

YppE family protein( domain architecture ID 10555967)

YppE family protein is a DUF1798 domain-containing protein; similar to Bacillus subtilis protein YppE

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1798 pfam08807
Bacterial domain of unknown function (DUF1798); This domain is found in many hypothetical ...
 10-113 1.77e-36

Bacterial domain of unknown function (DUF1798); This domain is found in many hypothetical proteins. The structure of one of the proteins in this family has been solved and it adopts an all alpha helical fold.


:

Pssm-ID: 400936  Cd Length: 108  Bit Score: 119.67  E-value: 1.77e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446377636   10 SEKLMQYNNEANVKKREIIE----YDFYKDMKPFVDIVDEELKVWKELAYTWIKEEKPKYIHVQQIDQVYDNLQTNVLQC 85
Cdd:pfam08807   1 TEQLLQYNEEAEERYQEVKEegkePDFFQDVKPFVDEVDQLLDEWKELALEWIKKERPKYLHEQQIEATIENIELLSVQS 80

                          90       100
                  ....*....|....*....|....*...
gi 446377636   86 FVNKGKGKRFFETHQAISYTLQNIVEQC 113
Cdd:pfam08807  81 FYPKTSKKRFKELYKSVKYTLQLILEEI 108
 
Name Accession Description Interval E-value
DUF1798 pfam08807
Bacterial domain of unknown function (DUF1798); This domain is found in many hypothetical ...
 10-113 1.77e-36

Bacterial domain of unknown function (DUF1798); This domain is found in many hypothetical proteins. The structure of one of the proteins in this family has been solved and it adopts an all alpha helical fold.


Pssm-ID: 400936  Cd Length: 108  Bit Score: 119.67  E-value: 1.77e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446377636   10 SEKLMQYNNEANVKKREIIE----YDFYKDMKPFVDIVDEELKVWKELAYTWIKEEKPKYIHVQQIDQVYDNLQTNVLQC 85
Cdd:pfam08807   1 TEQLLQYNEEAEERYQEVKEegkePDFFQDVKPFVDEVDQLLDEWKELALEWIKKERPKYLHEQQIEATIENIELLSVQS 80

                          90       100
                  ....*....|....*....|....*...
gi 446377636   86 FVNKGKGKRFFETHQAISYTLQNIVEQC 113
Cdd:pfam08807  81 FYPKTSKKRFKELYKSVKYTLQLILEEI 108
 
Name Accession Description Interval E-value
DUF1798 pfam08807
Bacterial domain of unknown function (DUF1798); This domain is found in many hypothetical ...
 10-113 1.77e-36

Bacterial domain of unknown function (DUF1798); This domain is found in many hypothetical proteins. The structure of one of the proteins in this family has been solved and it adopts an all alpha helical fold.


Pssm-ID: 400936  Cd Length: 108  Bit Score: 119.67  E-value: 1.77e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446377636   10 SEKLMQYNNEANVKKREIIE----YDFYKDMKPFVDIVDEELKVWKELAYTWIKEEKPKYIHVQQIDQVYDNLQTNVLQC 85
Cdd:pfam08807   1 TEQLLQYNEEAEERYQEVKEegkePDFFQDVKPFVDEVDQLLDEWKELALEWIKKERPKYLHEQQIEATIENIELLSVQS 80

                          90       100
                  ....*....|....*....|....*...
gi 446377636   86 FVNKGKGKRFFETHQAISYTLQNIVEQC 113
Cdd:pfam08807  81 FYPKTSKKRFKELYKSVKYTLQLILEEI 108
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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