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Conserved domains on  [gi|446381227|ref|WP_000459082|]
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MULTISPECIES: YoaH family protein [Gammaproteobacteria]

Protein Classification

YoaH family protein( domain architecture ID 10006959)

YoaH family protein similar to Yersinia pseudotuberculosis UPF0181 protein YPTS_1774

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
yoaH COG3140
Uncharacterized conserved protein YoaH, UPF0181 family [Function unknown];
1-53 1.78e-20

Uncharacterized conserved protein YoaH, UPF0181 family [Function unknown];


:

Pssm-ID: 442374  Cd Length: 58  Bit Score: 74.99  E-value: 1.78e-20
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|...
gi 446381227  1 MFDDLPTLTHAEQQVAVEKIQKLMAEGISTGEAIKIVAQQIREDKKAQNQGTH 53
Cdd:COG3140   1 MFNGLPALTHEQQQQAVERIQQLMAQGMSSGEAIALVAQEIREEHQGEQVVVR 53
 
Name Accession Description Interval E-value
yoaH COG3140
Uncharacterized conserved protein YoaH, UPF0181 family [Function unknown];
1-53 1.78e-20

Uncharacterized conserved protein YoaH, UPF0181 family [Function unknown];


Pssm-ID: 442374  Cd Length: 58  Bit Score: 74.99  E-value: 1.78e-20
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|...
gi 446381227  1 MFDDLPTLTHAEQQVAVEKIQKLMAEGISTGEAIKIVAQQIREDKKAQNQGTH 53
Cdd:COG3140   1 MFNGLPALTHEQQQQAVERIQQLMAQGMSSGEAIALVAQEIREEHQGEQVVVR 53
PRK05114 PRK05114
YoaH family protein;
1-50 3.91e-20

YoaH family protein;


Pssm-ID: 179941  Cd Length: 59  Bit Score: 74.29  E-value: 3.91e-20
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|
gi 446381227  1 MFDDLPTLTHAEQQVAVEKIQKLMAEGISTGEAIKIVAQQIREDKKAQNQ 50
Cdd:PRK05114  1 MFAGLPSLTHEQQQKAVERIQELMAQGMSSGEAIALVAEELRANHQGERI 50
UPF0181 pfam03701
Uncharacterized protein family (UPF0181); This family contains small proteins of about 50 ...
 1-50 1.59e-19

Uncharacterized protein family (UPF0181); This family contains small proteins of about 50 amino acids of unknown function. The family includes YoaH.


Pssm-ID: 427449  Cd Length: 50  Bit Score: 72.36  E-value: 1.59e-19
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 446381227   1 MFDDLPTLTHAEQQVAVEKIQKLMAEGISTGEAIKIVAQQIREDKKAQNQ 50
Cdd:pfam03701  1 MLDGLPSLTHEQQQQAVERIQQLMAQGMSSGEAIAIVAQELREEHQGKEV 50
 
Name Accession Description Interval E-value
yoaH COG3140
Uncharacterized conserved protein YoaH, UPF0181 family [Function unknown];
1-53 1.78e-20

Uncharacterized conserved protein YoaH, UPF0181 family [Function unknown];


Pssm-ID: 442374  Cd Length: 58  Bit Score: 74.99  E-value: 1.78e-20
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|...
gi 446381227  1 MFDDLPTLTHAEQQVAVEKIQKLMAEGISTGEAIKIVAQQIREDKKAQNQGTH 53
Cdd:COG3140   1 MFNGLPALTHEQQQQAVERIQQLMAQGMSSGEAIALVAQEIREEHQGEQVVVR 53
PRK05114 PRK05114
YoaH family protein;
1-50 3.91e-20

YoaH family protein;


Pssm-ID: 179941  Cd Length: 59  Bit Score: 74.29  E-value: 3.91e-20
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|
gi 446381227  1 MFDDLPTLTHAEQQVAVEKIQKLMAEGISTGEAIKIVAQQIREDKKAQNQ 50
Cdd:PRK05114  1 MFAGLPSLTHEQQQKAVERIQELMAQGMSSGEAIALVAEELRANHQGERI 50
UPF0181 pfam03701
Uncharacterized protein family (UPF0181); This family contains small proteins of about 50 ...
 1-50 1.59e-19

Uncharacterized protein family (UPF0181); This family contains small proteins of about 50 amino acids of unknown function. The family includes YoaH.


Pssm-ID: 427449  Cd Length: 50  Bit Score: 72.36  E-value: 1.59e-19
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 446381227   1 MFDDLPTLTHAEQQVAVEKIQKLMAEGISTGEAIKIVAQQIREDKKAQNQ 50
Cdd:pfam03701  1 MLDGLPSLTHEQQQQAVERIQQLMAQGMSSGEAIAIVAQELREEHQGKEV 50
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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