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MULTISPECIES: preprotein translocase subunit SecY [Streptococcus]
Protein Classification
preprotein translocase subunit SecY ( domain architecture ID 11415179 )
preprotein translocase subunit SecY plays an essential role to facilitate protein translocation; it is a component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA
List of domain hits
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
2-432
1.31e-173
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 492.67
E-value: 1.31e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 2 FFKL LK E A L K VKQV R SK ILFT IF I IL V F R I G TS I T VPG VNAKS L EA L --- SGLSF L NM L SLV SG N A MKN FS V FALG VS PY 78
Cdd:COG0201 1 MLST LK N A F K IPEL R KR ILFT LG I LI V Y R L G SH I P VPG IDPAA L AQ L faq QSGGL L GL L NMF SG G A LSR FS I FALG IM PY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 79 ITASI VV QLL QMD I l PK FV E WG K Q GE V GR R K LN Q A TRY IAL VLA FV Q SI GI TA G FNTLSGAKL L TTALTPQVFVTIG I I L 158
Cdd:COG0201 81 ITASI IM QLL TVV I - PK LE E LQ K E GE E GR K K IT Q Y TRY LTV VLA LL Q AF GI AL G LRSGPPGGG L VIDPGILFYLLTV I T L 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 159 TAG S M IVT WLGEQIT DK G Y GNG V S M IIFAGIVA SI P EMIKG I YVDYFVN ipssrl TS SI IFVVI L IIAV L LIVY F TT FV Q 238
Cdd:COG0201 160 TAG T M FLM WLGEQIT ER G I GNG I S L IIFAGIVA RL P SALAQ I FELVRTG ------ EL SI LLLLL L LVLA L AVIA F VV FV E 233
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 239 QA EYK IP I QY T K VAQ G ---- APS S S YLPLKVN P AGVIP V IFASS ITAA PA A I L QF L sat G HDWA W VRTAQEM LS TT SP TG 314
Cdd:COG0201 234 QA QRR IP V QY A K RVV G rrmy GGQ S T YLPLKVN M AGVIP I IFASS LLLF PA T I A QF F --- G GSSG W LQWIANY LS PG SP LY 310
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 315 VAM YALLII L FT F FYT FVQI NPE KA A E NL Q KSG AY I H G V RPGK G T E E FMS K L L R RL AT VG S IFL GV I S ILP IVAKDVF G L 394
Cdd:COG0201 311 IVL YALLII F FT Y FYT AITF NPE EI A D NL K KSG GF I P G I RPGK P T A E YLD K V L T RL TL VG A IFL AL I A ILP EILGAIT G V 390
410 420 430
....*....|....*....|....*....|....*...
gi 446387530 395 S ea VA FGGTSLLI IISTGIEGI KQ L E GY LL K R K Y V GF M 432
Cdd:COG0201 391 P -- FY FGGTSLLI VVGVALDTM KQ I E SQ LL M R H Y E GF L 426
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
2-432
1.31e-173
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 492.67
E-value: 1.31e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 2 FFKL LK E A L K VKQV R SK ILFT IF I IL V F R I G TS I T VPG VNAKS L EA L --- SGLSF L NM L SLV SG N A MKN FS V FALG VS PY 78
Cdd:COG0201 1 MLST LK N A F K IPEL R KR ILFT LG I LI V Y R L G SH I P VPG IDPAA L AQ L faq QSGGL L GL L NMF SG G A LSR FS I FALG IM PY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 79 ITASI VV QLL QMD I l PK FV E WG K Q GE V GR R K LN Q A TRY IAL VLA FV Q SI GI TA G FNTLSGAKL L TTALTPQVFVTIG I I L 158
Cdd:COG0201 81 ITASI IM QLL TVV I - PK LE E LQ K E GE E GR K K IT Q Y TRY LTV VLA LL Q AF GI AL G LRSGPPGGG L VIDPGILFYLLTV I T L 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 159 TAG S M IVT WLGEQIT DK G Y GNG V S M IIFAGIVA SI P EMIKG I YVDYFVN ipssrl TS SI IFVVI L IIAV L LIVY F TT FV Q 238
Cdd:COG0201 160 TAG T M FLM WLGEQIT ER G I GNG I S L IIFAGIVA RL P SALAQ I FELVRTG ------ EL SI LLLLL L LVLA L AVIA F VV FV E 233
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 239 QA EYK IP I QY T K VAQ G ---- APS S S YLPLKVN P AGVIP V IFASS ITAA PA A I L QF L sat G HDWA W VRTAQEM LS TT SP TG 314
Cdd:COG0201 234 QA QRR IP V QY A K RVV G rrmy GGQ S T YLPLKVN M AGVIP I IFASS LLLF PA T I A QF F --- G GSSG W LQWIANY LS PG SP LY 310
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 315 VAM YALLII L FT F FYT FVQI NPE KA A E NL Q KSG AY I H G V RPGK G T E E FMS K L L R RL AT VG S IFL GV I S ILP IVAKDVF G L 394
Cdd:COG0201 311 IVL YALLII F FT Y FYT AITF NPE EI A D NL K KSG GF I P G I RPGK P T A E YLD K V L T RL TL VG A IFL AL I A ILP EILGAIT G V 390
410 420 430
....*....|....*....|....*....|....*...
gi 446387530 395 S ea VA FGGTSLLI IISTGIEGI KQ L E GY LL K R K Y V GF M 432
Cdd:COG0201 391 P -- FY FGGTSLLI VVGVALDTM KQ I E SQ LL M R H Y E GF L 426
3a0501s007
TIGR00967 preprotein translocase, SecY subunit; Members of this protein family are the SecY component of ...
16-428
1.56e-134
preprotein translocase, SecY subunit; Members of this protein family are the SecY component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA. This model does not discriminate bacterial from archaeal forms. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273369
Cd Length: 410
Bit Score: 392.81
E-value: 1.56e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 16 R S K I LFT IFIILV FRIGT S I TV PG VN A K - SLEALSGLSFLNM L SLV SG N A MKNF S V FALG V SPYITASI VV QLL QM D IL P 94
Cdd:TIGR00967 1 R E K L LFT LGLLVL FRIGT F I PI PG ID A S a FQNLIQQNPIFGL L NTF SG G A LGQI S I FALG I SPYITASI II QLL TG D VP P 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 95 KFVEWG K Q GE V GRRK L NQ A TRY IA L V LAF V QS I GI TA gfntl S G AKLLTTALTPQVFVT I G I I LT A GSMIV T WLGEQIT D 174
Cdd:TIGR00967 81 LLQLQK K E GE I GRRK I NQ L TRY LT L I LAF I QS L GI VM ----- T G MYGYVGDPGAFFYLL I V I Q LT T GSMIV M WLGEQIT K 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 175 K G Y GNG V S MI IFAGI V A S IP EMIKGIYVDYFVNIPSSRLTSSIIFVVILI IA VLLIVYFTT FVQQA EY KIPIQ YT K VAQ G 254
Cdd:TIGR00967 156 Y G I GNG I S LL IFAGI A A T IP SGLLQPTEVRQSKVRDLISFLQNLPFLLYL IA TIIVFAVVV FVQQA RR KIPIQ SA K RQG G 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 255 APS -- S S YLPLK V N P AGVIPVIFAS SITAA PA A I L QFL SAT g HDW AW VRTAQEM LS TTS P T G VAM Y AL LII L F T FFY TFV 332
Cdd:TIGR00967 236 RRG sq S T YLPLK L N Y AGVIPVIFAS ALLSN PA T I S QFL NSN - QGG AW FLNPILS LS LSD P I G AIL Y LI LII F F S FFY VEL 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 333 Q I NPE KA A E NL Q K S G AY I H G V RPGK G TE EFMSKLLR RL AT VGS I FLG V I SI LP IVAKDVF GL SEAVAF GGTSLLI IISTG 412
Cdd:TIGR00967 315 Q L NPE DM A K NL K K Q G MF I P G I RPGK M TE KYLKRVIP RL TF VGS L FLG L I AL LP NFLGAIG GL PTSKGL GGTSLLI VVGVA 394
410
....*....|....*.
gi 446387530 413 I EGI KQLE GY L LK R K Y 428
Cdd:TIGR00967 395 I DTY KQLE SE L IS R N Y 410
SecY
pfam00344 SecY;
69-414
9.53e-117
SecY;
Pssm-ID: 459771
Cd Length: 322
Bit Score: 344.04
E-value: 9.53e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 69 S V FALG VS PYITASI VV QLL QMD I lp KFV E WG K Q GE V GR R K L NQ A TRY IAL VLA FV Q S IGI TAGFNTLS G AKLL ttaltp 148
Cdd:pfam00344 1 S L FALG IM PYITASI IM QLL GVV I -- SLE E LK K E GE E GR K K I NQ Y TRY LTV VLA LI Q A IGI VLSLGVYG G GGGF ------ 72
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 149 qv FVT I GII LTAG S M IVT WLGEQIT DK G Y GNG V S M IIFAGIVA SI P EMIK G IYVDY F VN ipssr LTS SI IFVVI L I I AV L 228
Cdd:pfam00344 73 -- YLL I VLQ LTAG T M FLM WLGEQIT KY G I GNG I S L IIFAGIVA RL P SAFS G ALIAL F RL ----- GAR SI LPNLL L L I IT L 145
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 229 LIVYFTTFV QQAE YK IP I QY T K VAQ G A p S SSYLPLK V N P AGVIP V IFASS ITAA PA A I L QF LSATGHDW A wvrtaqem L S 308
Cdd:pfam00344 146 AVIALVVYL QQAE RR IP V QY A K RVV G G - Q SSYLPLK L N Y AGVIP I IFASS LLSF PA T I A QF FGLQFIAA A -------- L D 216
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 309 TT SP TGVAM YALLII L F TF FYT FVQI NP EKA AENL Q K S G AY I H G V RPGK G T EEFMSKLLR R LATV G SI FLG V I SI LP IVA 388
Cdd:pfam00344 217 PG SP LYTVL YALLII F F AY FYT AITF NP KDI AENL K K Q G GF I P G I RPGK P T AKYLDRVIP R ITLL G AL FLG I I AV LP DLL 296
330 340
....*....|....*....|....*.
gi 446387530 389 KDVF G L se AVA FGGTSLLI IISTGIE 414
Cdd:pfam00344 297 GALT G V -- PFG FGGTSLLI VVGVALD 320
secY
CHL00161 preprotein translocase subunit SecY; Validated
15-433
1.04e-81
preprotein translocase subunit SecY; Validated
Pssm-ID: 214379
Cd Length: 417
Bit Score: 257.62
E-value: 1.04e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 15 VRSKI LFT IFII L VF R I GT S I T VPG VNAKS L EA - LS GLSF LN M L SLV SG NAMKNFSV FALG VS PYI T ASI VV QLL q MD I L 93
Cdd:CHL00161 10 LLNRL LFT LGLL L LI R L GT F I P VPG IDHTQ L YP s LS NNPL LN L L NTF SG GGFFVIGL FALG IL PYI N ASI II QLL - TS I I 88
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 94 P KFVEWG K - Q GE V GRRK L NQ A TRY IA L VL A FV QSIGI TAGF ntlsga K LLTTALTPQVFVT I GII LT A GSMIV T WL G E Q I 172
Cdd:CHL00161 89 P SLEKLQ K e E GE A GRRK I NQ Y TRY LT L GW A II QSIGI SFWL ------ K PYLFNWNLLLALE I VLA LT S GSMIV L WL S E L I 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 173 T D KG Y GNG V S MI IF AG IV ASI P EMIKGIY vdy F VNIPSSRLT S SIIFVVILI I AVLL I V yftt F V Q Q A EY KIP IQYT K -- 250
Cdd:CHL00161 163 T E KG L GNG S S LL IF FN IV SNL P KLLQSLL --- F SLSANITIL S ILLLLFLFF I TLIG I I ---- F L Q E A IR KIP LISA K ql 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 251 - VAQGAP S S SYLPL KV N P AGV I P V IFAS SITAA P AAILQF L SATGHDWAWVRTA Q EMLSTTSPTGV am Y AL LI IL F TF FY 329
Cdd:CHL00161 236 g KSSRLA S N SYLPL RL N Q AGV M P I IFAS ALLVL P GYLTNI L LNQFLLPLLSLFL Q LASFKILYLVL -- Y FV LI LF F SY FY 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 330 TFVQI NP EKAA ENLQK SGAY I H G V RPGK G T EEFMS K L L R RL ATV G SI FL GV I SI LP IVAKD V FG LS EAVAF G G TSLLI II 409
Cdd:CHL00161 314 STIVL NP KDIS ENLQK MAVS I P G I RPGK A T TKYLK K T L N RL TLL G AL FL AF I AL LP NLIES V LN LS VFKGL G T TSLLI LV 393
410 420
....*....|....*....|....
gi 446387530 410 STG I EGIK Q LEG YL LKRK Y VGFM D 433
Cdd:CHL00161 394 GVA I DTSR Q IQT YL ISNN Y ENMY D 417
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
2-432
1.31e-173
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 492.67
E-value: 1.31e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 2 FFKL LK E A L K VKQV R SK ILFT IF I IL V F R I G TS I T VPG VNAKS L EA L --- SGLSF L NM L SLV SG N A MKN FS V FALG VS PY 78
Cdd:COG0201 1 MLST LK N A F K IPEL R KR ILFT LG I LI V Y R L G SH I P VPG IDPAA L AQ L faq QSGGL L GL L NMF SG G A LSR FS I FALG IM PY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 79 ITASI VV QLL QMD I l PK FV E WG K Q GE V GR R K LN Q A TRY IAL VLA FV Q SI GI TA G FNTLSGAKL L TTALTPQVFVTIG I I L 158
Cdd:COG0201 81 ITASI IM QLL TVV I - PK LE E LQ K E GE E GR K K IT Q Y TRY LTV VLA LL Q AF GI AL G LRSGPPGGG L VIDPGILFYLLTV I T L 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 159 TAG S M IVT WLGEQIT DK G Y GNG V S M IIFAGIVA SI P EMIKG I YVDYFVN ipssrl TS SI IFVVI L IIAV L LIVY F TT FV Q 238
Cdd:COG0201 160 TAG T M FLM WLGEQIT ER G I GNG I S L IIFAGIVA RL P SALAQ I FELVRTG ------ EL SI LLLLL L LVLA L AVIA F VV FV E 233
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 239 QA EYK IP I QY T K VAQ G ---- APS S S YLPLKVN P AGVIP V IFASS ITAA PA A I L QF L sat G HDWA W VRTAQEM LS TT SP TG 314
Cdd:COG0201 234 QA QRR IP V QY A K RVV G rrmy GGQ S T YLPLKVN M AGVIP I IFASS LLLF PA T I A QF F --- G GSSG W LQWIANY LS PG SP LY 310
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 315 VAM YALLII L FT F FYT FVQI NPE KA A E NL Q KSG AY I H G V RPGK G T E E FMS K L L R RL AT VG S IFL GV I S ILP IVAKDVF G L 394
Cdd:COG0201 311 IVL YALLII F FT Y FYT AITF NPE EI A D NL K KSG GF I P G I RPGK P T A E YLD K V L T RL TL VG A IFL AL I A ILP EILGAIT G V 390
410 420 430
....*....|....*....|....*....|....*...
gi 446387530 395 S ea VA FGGTSLLI IISTGIEGI KQ L E GY LL K R K Y V GF M 432
Cdd:COG0201 391 P -- FY FGGTSLLI VVGVALDTM KQ I E SQ LL M R H Y E GF L 426
3a0501s007
TIGR00967 preprotein translocase, SecY subunit; Members of this protein family are the SecY component of ...
16-428
1.56e-134
preprotein translocase, SecY subunit; Members of this protein family are the SecY component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA. This model does not discriminate bacterial from archaeal forms. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273369
Cd Length: 410
Bit Score: 392.81
E-value: 1.56e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 16 R S K I LFT IFIILV FRIGT S I TV PG VN A K - SLEALSGLSFLNM L SLV SG N A MKNF S V FALG V SPYITASI VV QLL QM D IL P 94
Cdd:TIGR00967 1 R E K L LFT LGLLVL FRIGT F I PI PG ID A S a FQNLIQQNPIFGL L NTF SG G A LGQI S I FALG I SPYITASI II QLL TG D VP P 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 95 KFVEWG K Q GE V GRRK L NQ A TRY IA L V LAF V QS I GI TA gfntl S G AKLLTTALTPQVFVT I G I I LT A GSMIV T WLGEQIT D 174
Cdd:TIGR00967 81 LLQLQK K E GE I GRRK I NQ L TRY LT L I LAF I QS L GI VM ----- T G MYGYVGDPGAFFYLL I V I Q LT T GSMIV M WLGEQIT K 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 175 K G Y GNG V S MI IFAGI V A S IP EMIKGIYVDYFVNIPSSRLTSSIIFVVILI IA VLLIVYFTT FVQQA EY KIPIQ YT K VAQ G 254
Cdd:TIGR00967 156 Y G I GNG I S LL IFAGI A A T IP SGLLQPTEVRQSKVRDLISFLQNLPFLLYL IA TIIVFAVVV FVQQA RR KIPIQ SA K RQG G 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 255 APS -- S S YLPLK V N P AGVIPVIFAS SITAA PA A I L QFL SAT g HDW AW VRTAQEM LS TTS P T G VAM Y AL LII L F T FFY TFV 332
Cdd:TIGR00967 236 RRG sq S T YLPLK L N Y AGVIPVIFAS ALLSN PA T I S QFL NSN - QGG AW FLNPILS LS LSD P I G AIL Y LI LII F F S FFY VEL 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 333 Q I NPE KA A E NL Q K S G AY I H G V RPGK G TE EFMSKLLR RL AT VGS I FLG V I SI LP IVAKDVF GL SEAVAF GGTSLLI IISTG 412
Cdd:TIGR00967 315 Q L NPE DM A K NL K K Q G MF I P G I RPGK M TE KYLKRVIP RL TF VGS L FLG L I AL LP NFLGAIG GL PTSKGL GGTSLLI VVGVA 394
410
....*....|....*.
gi 446387530 413 I EGI KQLE GY L LK R K Y 428
Cdd:TIGR00967 395 I DTY KQLE SE L IS R N Y 410
SecY
pfam00344 SecY;
69-414
9.53e-117
SecY;
Pssm-ID: 459771
Cd Length: 322
Bit Score: 344.04
E-value: 9.53e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 69 S V FALG VS PYITASI VV QLL QMD I lp KFV E WG K Q GE V GR R K L NQ A TRY IAL VLA FV Q S IGI TAGFNTLS G AKLL ttaltp 148
Cdd:pfam00344 1 S L FALG IM PYITASI IM QLL GVV I -- SLE E LK K E GE E GR K K I NQ Y TRY LTV VLA LI Q A IGI VLSLGVYG G GGGF ------ 72
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 149 qv FVT I GII LTAG S M IVT WLGEQIT DK G Y GNG V S M IIFAGIVA SI P EMIK G IYVDY F VN ipssr LTS SI IFVVI L I I AV L 228
Cdd:pfam00344 73 -- YLL I VLQ LTAG T M FLM WLGEQIT KY G I GNG I S L IIFAGIVA RL P SAFS G ALIAL F RL ----- GAR SI LPNLL L L I IT L 145
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 229 LIVYFTTFV QQAE YK IP I QY T K VAQ G A p S SSYLPLK V N P AGVIP V IFASS ITAA PA A I L QF LSATGHDW A wvrtaqem L S 308
Cdd:pfam00344 146 AVIALVVYL QQAE RR IP V QY A K RVV G G - Q SSYLPLK L N Y AGVIP I IFASS LLSF PA T I A QF FGLQFIAA A -------- L D 216
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 309 TT SP TGVAM YALLII L F TF FYT FVQI NP EKA AENL Q K S G AY I H G V RPGK G T EEFMSKLLR R LATV G SI FLG V I SI LP IVA 388
Cdd:pfam00344 217 PG SP LYTVL YALLII F F AY FYT AITF NP KDI AENL K K Q G GF I P G I RPGK P T AKYLDRVIP R ITLL G AL FLG I I AV LP DLL 296
330 340
....*....|....*....|....*.
gi 446387530 389 KDVF G L se AVA FGGTSLLI IISTGIE 414
Cdd:pfam00344 297 GALT G V -- PFG FGGTSLLI VVGVALD 320
secY
CHL00161 preprotein translocase subunit SecY; Validated
15-433
1.04e-81
preprotein translocase subunit SecY; Validated
Pssm-ID: 214379
Cd Length: 417
Bit Score: 257.62
E-value: 1.04e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 15 VRSKI LFT IFII L VF R I GT S I T VPG VNAKS L EA - LS GLSF LN M L SLV SG NAMKNFSV FALG VS PYI T ASI VV QLL q MD I L 93
Cdd:CHL00161 10 LLNRL LFT LGLL L LI R L GT F I P VPG IDHTQ L YP s LS NNPL LN L L NTF SG GGFFVIGL FALG IL PYI N ASI II QLL - TS I I 88
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 94 P KFVEWG K - Q GE V GRRK L NQ A TRY IA L VL A FV QSIGI TAGF ntlsga K LLTTALTPQVFVT I GII LT A GSMIV T WL G E Q I 172
Cdd:CHL00161 89 P SLEKLQ K e E GE A GRRK I NQ Y TRY LT L GW A II QSIGI SFWL ------ K PYLFNWNLLLALE I VLA LT S GSMIV L WL S E L I 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 173 T D KG Y GNG V S MI IF AG IV ASI P EMIKGIY vdy F VNIPSSRLT S SIIFVVILI I AVLL I V yftt F V Q Q A EY KIP IQYT K -- 250
Cdd:CHL00161 163 T E KG L GNG S S LL IF FN IV SNL P KLLQSLL --- F SLSANITIL S ILLLLFLFF I TLIG I I ---- F L Q E A IR KIP LISA K ql 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 251 - VAQGAP S S SYLPL KV N P AGV I P V IFAS SITAA P AAILQF L SATGHDWAWVRTA Q EMLSTTSPTGV am Y AL LI IL F TF FY 329
Cdd:CHL00161 236 g KSSRLA S N SYLPL RL N Q AGV M P I IFAS ALLVL P GYLTNI L LNQFLLPLLSLFL Q LASFKILYLVL -- Y FV LI LF F SY FY 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 330 TFVQI NP EKAA ENLQK SGAY I H G V RPGK G T EEFMS K L L R RL ATV G SI FL GV I SI LP IVAKD V FG LS EAVAF G G TSLLI II 409
Cdd:CHL00161 314 STIVL NP KDIS ENLQK MAVS I P G I RPGK A T TKYLK K T L N RL TLL G AL FL AF I AL LP NLIES V LN LS VFKGL G T TSLLI LV 393
410 420
....*....|....*....|....
gi 446387530 410 STG I EGIK Q LEG YL LKRK Y VGFM D 433
Cdd:CHL00161 394 GVA I DTSR Q IQT YL ISNN Y ENMY D 417
secY
PRK12417 preprotein translocase subunit SecY; Reviewed
18-434
6.19e-48
preprotein translocase subunit SecY; Reviewed
Pssm-ID: 237095
Cd Length: 404
Bit Score: 169.02
E-value: 6.19e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 18 KILFT I FI ILVFRI G TS I TV P G V NAKSLEALSG l SFL NMLSLVS G NAMKNFSV F A LG VS P YI T AS I VV QL LQMDILPKFV 97
Cdd:PRK12417 15 KILFT C FI LFIYIL G SN I SI P F V SYNDMLGGHE - SFL KIAAANT G GDLRTLNI F S LG LG P WM T SM I IL QL FSYRKRDGLM 93
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 98 ewg KQ G evg RRKLNQAT R YIA L VL A FV QS IGITAGFNTLSGAKLL ttaltpq VFVTIGI IL TA G S M IVT WL GEQ it DKG Y 177
Cdd:PRK12417 94 --- KQ T --- IEEQHYRE R ILT L II A VI QS LAVILSLPSKERISQT ------- NILLNTL IL VT G T M FLV WL SDL -- NAR Y 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 178 G N G VS M I I fag IVA S ipe MIK G I YV D YFVN I PS S RL t SS I IFVVIL II A v L LIV YF TTF V qqa EY K IP IQYTKVAQGAPS 257
Cdd:PRK12417 159 G I G GP M P I --- VLV S --- MIK S I PQ D VIEY I DA S HI - VI I LLILLV II T - L FFL YF IEL V --- EY R IP YNDIMNHNRFKM 227
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 258 S SYL PL K V NPAG VI P VIFAS S ITAA P AA I LQFLSATGHDWAWVRTAQE MLS TT SP T GV AM Y AL L II L FTF F YT FV Q IN PE 337
Cdd:PRK12417 228 Y SYL SI K L NPAG GM P IMYSM S LLVF P QY I IILILSIFPNNSGISADMD MLS FG SP L GV TV Y LI L QF L LSY F FS FV N IN TK 307
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 338 KA A ENLQ KSG A YI H GV R PGK G TE EFMSKLL RR LATV G SI F LG VI SIL P I - VAKDVFG LS EAVA F G G t SLLIIISTGIEGI 416
Cdd:PRK12417 308 QI A KDML KSG N YI P GV Y PGK D TE RYLNYIA RR FSWF G AL F VT VI AGI P L y FTLFDPH LS TEIY F S G - QFMMFVGMSFNIA 386
410
....*....|....*...
gi 446387530 417 KQLEGY L LKR KY VGFMDK 434
Cdd:PRK12417 387 DEIRAL L YFD KY KPLLNQ 404
acc_sec_Y2
TIGR02920 accessory Sec system translocase SecY2; Members of this family are restricted to the ...
18-428
2.47e-41
accessory Sec system translocase SecY2; Members of this family are restricted to the Firmicutes lineage (low-GC Gram-positive bacteria) and appear to be paralogous to, and much more divergent than, the preprotein translocase SecY. Members include the SecY2 protein of the accessory Sec system in Streptococcus gordonii, involved in export of the highly glycosylated platelet-binding protein GspB. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 131966
Cd Length: 395
Bit Score: 151.04
E-value: 2.47e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 18 KILFT I FI ILVFRI G TS I TV P G V -- NAKSL E ALSG l SF LNMLSLVS G NAMKNF S V F A LG VS P YI T AS I VV QL LQ mdilpk 95
Cdd:TIGR02920 5 KILFT C FI LIIYVL G SY I PI P F V ev SKQDM E GVKN - SF FKIAIANT G GNLTTL S I F S LG LG P WM T SM I IL QL FS ------ 77
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 96 F VEWGKQGEVGRRKLNQAT R YIA L VL A FV Q SIG I TAG F NTLS G AKLLTTA L TP qvfvtig I IL TA G SMIVT WL GEQITDK 175
Cdd:TIGR02920 78 F TKSDGFDAQSPKEQQYRE R FLT L II A II Q GLA I IHS F TNKN G LSDFNML L AT ------- L IL VT G TCLLV WL ADLNAKY 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 176 G Y G n G VSM I IFAGIVAS IP EMIKGIYVD yfvnipssrlt S S I IFVVI LI IAV L LIVYFTT F VQQ AEY K IP IQYTKVAQGA 255
Cdd:TIGR02920 151 G I G - G SMP I VLVSMLKN IP SNVFELFQM ----------- S Y I WLIAL LI LLT L VALFLLA F IER AEY R IP VNDISLHNRS 218
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 256 PSS SYLP L K V NPAG VIPVIFAS S ITAA P AA I LQF L SATGHDWAWVRTAQEML S TT SP T G VAM Y AL L II L FTF F Y TFV Q IN 335
Cdd:TIGR02920 219 NLM SYLP I K L NPAG GMMYMYVM S LLML P QY I IIL L GRIFPNSSLINNWVFQF S FS SP V G ILI Y LI L QM L LSY F F TFV N IN 298
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 336 P EKAAENLQ KSG A YI H G VR PGK G T EEFMSK L L RR LATV G SI F LGVISIL P IVAKDVFGLSEAV A FGGTSLLI I ISTGIEG 415
Cdd:TIGR02920 299 P KEISKSFR KSG N YI P G IA PGK D T QRYLNR L A RR FCWF G GV F NAFQLGI P LYFALFVPHLLTE A YIPGQFMM I TGMSFNI 378
410
....*....|...
gi 446387530 416 IKQLEGY L LKRK Y 428
Cdd:TIGR02920 379 ADEIRTI L YFDR Y 391
PRK08568
PRK08568 preprotein translocase subunit SecY; Reviewed
16-410
4.84e-13
preprotein translocase subunit SecY; Reviewed
Pssm-ID: 236293
Cd Length: 462
Bit Score: 70.64
E-value: 4.84e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 16 RS K ILF T IFIILVFR I G T S I TVP G VNAK S LEALSG L SFLN mlslvsgn A MKNFSVFA LG VS P YI TA S I VV QLL ------ Q 89
Cdd:PRK08568 27 KE K LKW T AIVLILYF I L T N I PLY G ISQS S QDLFEL L RIIF -------- A GSFGTLLQ LG IG P IV TA G I IL QLL vgskli N 98
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 90 M D I lpkfvewgk QGEVG R RKLNQATRYI A L V LAFV qsigi T A GFNT L S GA KLLT T A L TPQVFVTIG I I -- L TA G SMIVTW 167
Cdd:PRK08568 99 L D L --------- SDPED R ALFQGLQKLL A I V MIAL ----- E A APFV L A GA FGPA T G L ASTPLLALL I F lq L FL G GILIIL 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 168 L G E QITDK G Y G N G V S MI I F AG IVAS I ----------- PEMIK G IYVDY F VN I P S SR LT SSIIFVVIL ----- I I AVLL I V 231
Cdd:PRK08568 165 L D E LVSKW G I G S G I S LF I L AG VSQT I fvglfnwltgg QGLPV G FIPAL F SA I T S GN LT LALLLTTRG llllg L I TTIV I F 244
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 232 YFTTFVQQAEYK IP IQYTK V a Q GA PSS sy L PLK VNPAG V I PVI FASSIT A APAAIL Q F L SAT G HDWAWVRTAQEMLSTTS 311
Cdd:PRK08568 245 LIVVYLESMRVE IP LSHGR V - R GA RGR -- Y PLK FIYVS V L PVI LVRALQ A NIQLFG Q L L QRL G IPILGTYDSSGASPISG 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 312 ----------------- P TGVAM YAL LI I LFT -- F FYTF V QI --- N P EKA A EN LQ K SG AY I H G V R PGKGT - E EFMSKLLR 368
Cdd:PRK08568 322 layylspphspydwiqd P LRAII YAL FM I VLS il F AIFW V ET tgl D P KTQ A RQ LQ N SG MQ I P G F R RNPKV i E KVLERYIP 401
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 446387530 369 RLATV G SIFL G VISI L piva K D VF G lsea VAF GGT S LL III S 410
Cdd:PRK08568 402 PVTVI G GAIV G LLAV L ---- A D LL G ---- ALG GGT G LL LTV S 435
PTZ00219
PTZ00219 Sec61 alpha subunit; Provisional
7-193
6.66e-03
Sec61 alpha subunit; Provisional
Pssm-ID: 185519 [Multi-domain]
Cd Length: 474
Bit Score: 38.83
E-value: 6.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 7 K E ALKVKQVRS K I L F T IFIIL VF RIGTS I TVP G VNAK S leal S GLS F LN M LSLVSG N amk NFSVFA LG V SP YI T A S I V V Q 86
Cdd:PTZ00219 22 A E PDRKIPFKE K V L W T AIALF VF LVCCQ I PLY G IRSS S ---- S SDP F YW M RVILAS N --- RGTLME LG I SP IV T S S M V M Q 94
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446387530 87 LL QM dil P K FVEWGKQGEVG R RKLNQ A TRYIA L VLAFVQSIGI tagfn TL SG AKLLTTALTPQVFVT I GII L TAGSMI V T 166
Cdd:PTZ00219 95 LL AG --- S K IIDVDQNNKED R ALFEG A QKLLG L LITLGEAVAY ----- VW SG MYGDISEIGAGNAIL I ILQ L FFAGIV V I 166
170 180
....*....|....*....|....*....
gi 446387530 167 W L G E q ITD KGY -- G N G V S MI I FAG I VAS I 193
Cdd:PTZ00219 167 L L D E - LLQ KGY gl G S G I S LF I ATN I CET I 194
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
