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Conserved domains on  [gi|446397374|ref|WP_000475229|]
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MULTISPECIES: triple tyrosine motif-containing protein [Bacillus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK14081 super family cl28461
triple tyrosine motif-containing protein; Provisional
 36-118 1.80e-04

triple tyrosine motif-containing protein; Provisional


The actual alignment was detected with superfamily member PRK14081:

Pssm-ID: 237602 [Multi-domain]  Cd Length: 667  Bit Score: 39.64  E-value: 1.80e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446397374  36 KKNTPLKIDEVKI----NTVNGKTLMVDVKAKG-EKLTYAYYIYKGEEIVEKIWYKPENSLKYEVKEPGKYKVKAYAKD- 109
Cdd:PRK14081 380 KSKEPIKIEDVILdkgkHILKGEEIKIRVIAEGgTNLRYSFIIKKDGKEEEKIDYGKNNWVNFIPEEKGNYELEVRVKDk 459

                         90
                 ....*....|
gi 446397374 110 -ANKKIDSVY 118
Cdd:PRK14081 460 ySDKEYDAHT 469
 
Name Accession Description Interval E-value
PRK14081 PRK14081
triple tyrosine motif-containing protein; Provisional
 36-118 1.80e-04

triple tyrosine motif-containing protein; Provisional


Pssm-ID: 237602 [Multi-domain]  Cd Length: 667  Bit Score: 39.64  E-value: 1.80e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446397374  36 KKNTPLKIDEVKI----NTVNGKTLMVDVKAKG-EKLTYAYYIYKGEEIVEKIWYKPENSLKYEVKEPGKYKVKAYAKD- 109
Cdd:PRK14081 380 KSKEPIKIEDVILdkgkHILKGEEIKIRVIAEGgTNLRYSFIIKKDGKEEEKIDYGKNNWVNFIPEEKGNYELEVRVKDk 459

                         90
                 ....*....|
gi 446397374 110 -ANKKIDSVY 118
Cdd:PRK14081 460 ySDKEYDAHT 469
Y_Y_Y pfam07495
Y_Y_Y domain; This domain is mostly found at the end of the beta propellers (pfam07494) in a ...
 60-125 3.26e-03

Y_Y_Y domain; This domain is mostly found at the end of the beta propellers (pfam07494) in a family of two component regulators. However they are also found tandemly repeated in Swiss:Q891H4 without other signal conduction domains being present. It's named after the conserved tyrosines found in the alignment. The exact function is not known.


Pssm-ID: 400051 [Multi-domain]  Cd Length: 65  Bit Score: 33.86  E-value: 3.26e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446397374   60 VKAKGEKLTYAY-YIYKGEEIVEKIWYkpeNSLKYEVKEPGKYKVKAYAKDAN-KKIDSVYTNEVTIE 125
Cdd:pfam07495   1 NYDGPENLLYRYrLEGFDGEWVELGDY---SEASYTNLPPGKYTLKVKAKDNDgNWSYDDASLNFTIL 65
 
Name Accession Description Interval E-value
PRK14081 PRK14081
triple tyrosine motif-containing protein; Provisional
 36-118 1.80e-04

triple tyrosine motif-containing protein; Provisional


Pssm-ID: 237602 [Multi-domain]  Cd Length: 667  Bit Score: 39.64  E-value: 1.80e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446397374  36 KKNTPLKIDEVKI----NTVNGKTLMVDVKAKG-EKLTYAYYIYKGEEIVEKIWYKPENSLKYEVKEPGKYKVKAYAKD- 109
Cdd:PRK14081 380 KSKEPIKIEDVILdkgkHILKGEEIKIRVIAEGgTNLRYSFIIKKDGKEEEKIDYGKNNWVNFIPEEKGNYELEVRVKDk 459

                         90
                 ....*....|
gi 446397374 110 -ANKKIDSVY 118
Cdd:PRK14081 460 ySDKEYDAHT 469
Y_Y_Y pfam07495
Y_Y_Y domain; This domain is mostly found at the end of the beta propellers (pfam07494) in a ...
 60-125 3.26e-03

Y_Y_Y domain; This domain is mostly found at the end of the beta propellers (pfam07494) in a family of two component regulators. However they are also found tandemly repeated in Swiss:Q891H4 without other signal conduction domains being present. It's named after the conserved tyrosines found in the alignment. The exact function is not known.


Pssm-ID: 400051 [Multi-domain]  Cd Length: 65  Bit Score: 33.86  E-value: 3.26e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446397374   60 VKAKGEKLTYAY-YIYKGEEIVEKIWYkpeNSLKYEVKEPGKYKVKAYAKDAN-KKIDSVYTNEVTIE 125
Cdd:pfam07495   1 NYDGPENLLYRYrLEGFDGEWVELGDY---SEASYTNLPPGKYTLKVKAKDNDgNWSYDDASLNFTIL 65
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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