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Conserved domains on  [gi|446401685|ref|WP_000479540|]
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MULTISPECIES: fimbrial chaperone [Escherichia]

Protein Classification

fimbria/pilus periplasmic chaperone( domain architecture ID 11484525)

fimbria/pilus periplasmic chaperone, similar to Haemophilus sp. GhfB protein which is thought to confer upon the strain the ability to survive in the genital tract

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK09926 PRK09926
fimbrial chaperone;
1-246 0e+00

fimbrial chaperone;


:

Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 497.32  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685   1 MFLNAKHTAAVCFATCMSLSASAIADIVISGTRVIYKSNEKSVNVRLENKGNNPLLVQSWLDTGDDSAEPGSITVPFTAT 80
Cdd:PRK09926   1 MFFNTKHTTALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTAT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  81 PPVSRIDAKRGQTIKLMYTASSPLPKDRESVFWFNVLEVPPKPDADKVANQSLLQLAFRTRIKLFYRPEGLNGLPSDAPA 160
Cdd:PRK09926  81 PPVSRIDPKRGQTIKLMYTASTALPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685 161 ALKWSWATSAGKTALRVANPTPYHVSFSSGDLVANGKTYPLDVKMVAPLSEETFYIKGMSGKASSAKVHFFAINDFGGAI 240
Cdd:PRK09926 161 ALKWSWAGSEGKASLRVTNPTPYYVSFSSGDLEAGGKRYPVDSKMIAPFSDESMKVKGLSGKASSGKVHFYAINDFGGAI 240

                 ....*.
gi 446401685 241 EGNASL 246
Cdd:PRK09926 241 EGNASL 246
 
Name Accession Description Interval E-value
PRK09926 PRK09926
fimbrial chaperone;
1-246 0e+00

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 497.32  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685   1 MFLNAKHTAAVCFATCMSLSASAIADIVISGTRVIYKSNEKSVNVRLENKGNNPLLVQSWLDTGDDSAEPGSITVPFTAT 80
Cdd:PRK09926   1 MFFNTKHTTALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTAT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  81 PPVSRIDAKRGQTIKLMYTASSPLPKDRESVFWFNVLEVPPKPDADKVANQSLLQLAFRTRIKLFYRPEGLNGLPSDAPA 160
Cdd:PRK09926  81 PPVSRIDPKRGQTIKLMYTASTALPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685 161 ALKWSWATSAGKTALRVANPTPYHVSFSSGDLVANGKTYPLDVKMVAPLSEETFYIKGMSGKASSAKVHFFAINDFGGAI 240
Cdd:PRK09926 161 ALKWSWAGSEGKASLRVTNPTPYYVSFSSGDLEAGGKRYPVDSKMIAPFSDESMKVKGLSGKASSGKVHFYAINDFGGAI 240

                 ....*.
gi 446401685 241 EGNASL 246
Cdd:PRK09926 241 EGNASL 246
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
8-246 4.86e-91

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 268.01  E-value: 4.86e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685   8 TAAVCFATCMSLSASAIADIVISGTRVIYKSNEKSVNVRLENKGNNPLLVQSWLDTGDDSAEPGSITVPFTATPPVSRID 87
Cdd:COG3121    6 RLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLE 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  88 AKRGQTIKLMYTaSSPLPKDRESVFWFNVLEVPPKPDADKVANQslLQLAFRTRIKLFYRPEGLNGLPSDAPAALKWSWA 167
Cdd:COG3121   86 PGKSQTVRIIRT-GPPLPQDRESLFRLNVDEIPPKDASEEGKNT--LQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLV 162
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446401685 168 tsagKTALRVANPTPYHVSFSSGDLVANGKTYPLDVKMVAPLSEETFYIKGMSGKASSAKVHFFAINDFGGAIEGNASL 246
Cdd:COG3121  163 ----GNGLTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLAAGGKVTWATINDYGGAVPLEATL 237
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
27-151 7.84e-59

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 182.02  E-value: 7.84e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685   27 IVISGTRVIYKSNEKSVNVRLENKGNNPLLVQSWLDTGDDSAEPGSITVPFTATPPVSRIDAKRGQTIKLmYTASSPLPK 106
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRI-YTTGPPLPT 79
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 446401685  107 DRESVFWFNVLEVPPKPDADKVANQslLQLAFRTRIKLFYRPEGL 151
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDKPKGGQNG--LQLALRSRIKLFYRPAGL 122
 
Name Accession Description Interval E-value
PRK09926 PRK09926
fimbrial chaperone;
1-246 0e+00

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 497.32  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685   1 MFLNAKHTAAVCFATCMSLSASAIADIVISGTRVIYKSNEKSVNVRLENKGNNPLLVQSWLDTGDDSAEPGSITVPFTAT 80
Cdd:PRK09926   1 MFFNTKHTTALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTAT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  81 PPVSRIDAKRGQTIKLMYTASSPLPKDRESVFWFNVLEVPPKPDADKVANQSLLQLAFRTRIKLFYRPEGLNGLPSDAPA 160
Cdd:PRK09926  81 PPVSRIDPKRGQTIKLMYTASTALPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685 161 ALKWSWATSAGKTALRVANPTPYHVSFSSGDLVANGKTYPLDVKMVAPLSEETFYIKGMSGKASSAKVHFFAINDFGGAI 240
Cdd:PRK09926 161 ALKWSWAGSEGKASLRVTNPTPYYVSFSSGDLEAGGKRYPVDSKMIAPFSDESMKVKGLSGKASSGKVHFYAINDFGGAI 240

                 ....*.
gi 446401685 241 EGNASL 246
Cdd:PRK09926 241 EGNASL 246
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
8-246 4.86e-91

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 268.01  E-value: 4.86e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685   8 TAAVCFATCMSLSASAIADIVISGTRVIYKSNEKSVNVRLENKGNNPLLVQSWLDTGDDSAEPGSITVPFTATPPVSRID 87
Cdd:COG3121    6 RLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRLE 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  88 AKRGQTIKLMYTaSSPLPKDRESVFWFNVLEVPPKPDADKVANQslLQLAFRTRIKLFYRPEGLNGLPSDAPAALKWSWA 167
Cdd:COG3121   86 PGKSQTVRIIRT-GPPLPQDRESLFRLNVDEIPPKDASEEGKNT--LQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLV 162
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446401685 168 tsagKTALRVANPTPYHVSFSSGDLVANGKTYPLDVKMVAPLSEETFYIKGMSGKASSAKVHFFAINDFGGAIEGNASL 246
Cdd:COG3121  163 ----GNGLTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLAAGGKVTWATINDYGGAVPLEATL 237
PRK15249 PRK15249
fimbrial chaperone;
20-240 7.29e-62

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 194.63  E-value: 7.29e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  20 SASAIADIVISGTRVIYKSNEKSVNVRLENKGNNPLLVQSWLDTGDDSAEP-GSITVPFTATPPVSRIDAKRGQTIKLMY 98
Cdd:PRK15249  23 ATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPeNSSAMPFIATPPVFRIQPKAGQVVRVIY 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  99 TASSPLPKDRESVFWFNVLEVPPKpDADKVANQSLLQLAFRTRIKLFYRPEGLnGLPSDAPAALKWSWATSA-GKTALRV 177
Cdd:PRK15249 103 NNTKKLPQDRESVFWFNVLQVPPT-NIGSDSGQNKMLVMLRSRIKLFYRPDGL-GKPDNLAKKLQIKTVNKGsGKSGIVI 180
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446401685 178 ANPTPYHVSFSSGDLVANGKTYPLDVKMVAPLSEETFYIKG-MSGKASSAKVHFFAINDFGGAI 240
Cdd:PRK15249 181 VNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWWLPGkRSLKSFSGTVTVTLVNDQGARI 244
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
27-151 7.84e-59

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 182.02  E-value: 7.84e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685   27 IVISGTRVIYKSNEKSVNVRLENKGNNPLLVQSWLDTGDDSAEPGSITVPFTATPPVSRIDAKRGQTIKLmYTASSPLPK 106
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRI-YTTGPPLPT 79
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 446401685  107 DRESVFWFNVLEVPPKPDADKVANQslLQLAFRTRIKLFYRPEGL 151
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDKPKGGQNG--LQLALRSRIKLFYRPAGL 122
lfpB PRK15290
fimbrial chaperone;
3-237 8.76e-43

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 145.13  E-value: 8.76e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685   3 LNAKHTAAVCFATCMSLSASAIADIVISGTRVIYKSNEKSVNVRLENKGNN-PLLVQSWLD--TGDDSAEPgsitvPFTA 79
Cdd:PRK15290  15 VSCKLFTAIILSVFLGQPALTYAGVVIGGTRVVYLSNNPDKSISVFSKEEKiPYLIQAWVDpfNKEDKSKA-----PFTV 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  80 TPPVSRIDAKRGQTIKLMYTASSPLPKDRESVFWFNVLEVPPKPdADKVANQslLQLAFRTRIKLFYRPEGLNGLPSDAP 159
Cdd:PRK15290  90 IPPVSRLEPSQEKVLRIIHTKGVSLPDDRESVFWLNIKNIPPSA-SNKATNS--LEIAVKTRIKLFWRPASIRLIPEDAA 166
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446401685 160 AALKWSWATSagktALRVANPTPYHVSFSsgDLVANGKTYPLDvkMVAPLseETFYIKGMSGKASSAKVHFFaINDFG 237
Cdd:PRK15290 167 PKVKWRREGR----NLIAENPNPIHISVM--DVIVDGHDVPLN--MIRPF--ETLTLPLPANSAGGQMTWRF-INDYG 233
PRK15208 PRK15208
molecular chaperone LpfB;
17-241 2.48e-38

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 133.50  E-value: 2.48e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  17 MSLSASAIADIV-ISGTRVIYKSNEKSVNVRLENKG-NNPLLVQSWLDTGDdsaepGSITVPFTATPPVSRIDAKRGQTI 94
Cdd:PRK15208  12 ALIAQNSFAGGVaLSSTRVIYDGSKKEASLTVNNKSkTEEFLIQSWIDDAN-----GNKKTPFIITPPLFKLDPTKNNVL 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  95 KLMYTASSpLPKDRESVFWFNVLEVPPKPDADKvaNQSLLQLAFRTRIKLFYRPEGLNGLPSDAPAALKWswaTSAGKTa 174
Cdd:PRK15208  87 RIVNITNT-LPQDRESVYWINVKAIPAKSEDAE--NKNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRF---TRAGNQ- 159
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446401685 175 LRVANPTPYHVSFSsgDLVANGKTYPlDVKMVAPLSEETFYIKGMSGKASsaKVHFFAINDFGGAIE 241
Cdd:PRK15208 160 IKVENPSAFNLTFN--QFYANGRDIE-KAGMVPAKGSLNIELPAGTGKVS--EVKYNIINDFGTAGE 221
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
23-243 5.78e-38

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 132.87  E-value: 5.78e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  23 AIADIVISGTRVIYKSNEKSVNVRLENKGNNPLLVQSWLDTGDDSAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTASS 102
Cdd:PRK15253  31 AHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQVPFMLTPPVARVAAESGQQIKIKKMPNS 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685 103 pLPKDRESVFWFNVLEVPpkPDADKVANQSLLQLAFRTRIKLFYRPEGLNGLPSDAPAALkwswATSAGKTALRVANPTP 182
Cdd:PRK15253 111 -LPDNKESLFYLNVLDIP--PNSQENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRI----GLFRSNKTVIMKNDTA 183
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446401685 183 YHVSFS---SGDLVANGKTYpldvkMVAPLSEETFYIKgmsgKASSAKVHFFAINDFGGAIEGN 243
Cdd:PRK15253 184 NWITVTdvkAGNTKINDQTI-----MLPPLSTQNINMK----YASTSQYEVTIIDDNGNYISSK 238
PRK15218 PRK15218
fimbrial assembly chaperone;
14-151 1.18e-36

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 128.95  E-value: 1.18e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  14 ATCMSLSA-SAIADIVISGTRVIYKSNEKSVNVRLENKGNNPLLVQSWLDTGDDSAEPGSITVPFTATPPVSRIDAKRGQ 92
Cdd:PRK15218   6 ALCLACAAmPAWSGIYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWIDNGDTSLPPEKLQVPFIMTPPVIRVAANSGQ 85
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 446401685  93 TIKLMYTASSpLPKDRESVFWFNVLEVPPKPDADKvaNQSLLQLAFRTRIKLFYRPEGL 151
Cdd:PRK15218  86 QLKIKKLANN-LPGDRESLFYLNVLDIPPNSDENK--DKNIIKFALQNRIKLIYRPPGV 141
PRK15246 PRK15246
fimbrial assembly chaperone;
19-246 1.34e-34

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 123.92  E-value: 1.34e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  19 LSASAIADIVISGTRVIYKSNEKSVNVRLENKGNNPLLVQSWLDTGDDSAEPGSITVPFTATPPVSRIDAKRGQTIKLMY 98
Cdd:PRK15246   4 WYGPAQAAVNIDRTRIIFASDDVAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTPLVALPPVFKMQPGELRTLRLLL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  99 TASSPLPKDRESVFWFNVLEVPPKPDADKVANQSLLqLAFRTRIKLFYRPEGLNGLPSDAPAALKWswatSAGKTALRVA 178
Cdd:PRK15246  84 SSRQQLATDRESLFWLNIYQIPPVTQDIKNHPRKLV-LPLRLRLKILIRPTGLKAPTEAEEKKLRF----IAKENTIRIV 158
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446401685 179 NPTPYHVSFSSGdlVANGKTypLDVKMVAPLSEETFYIKgmSGKASSAKVHFFAINDFGGAIEGNASL 246
Cdd:PRK15246 159 NPTSWYMSLTLT--MDNKKS--IGDIMVAPKTALDVPLT--RSPTPGASINYAVINDSGNWRQYTAIL 220
PRK15295 PRK15295
fimbrial assembly chaperone;
13-237 4.05e-33

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 119.66  E-value: 4.05e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  13 FATCMSLSAS-AIADIVISGTRVIYKSNEKSVNVRLENKGNNPLLVQSWLDTGdDSAEPGSITvpFTATPPVSRIDAKRG 91
Cdd:PRK15295   6 SVLVVLLTSHvAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVV-DPQVTNKQA--FIITPPLFRLDAGQK 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  92 QTIKLMYTAsSPLPKDRESVFWFNVLEVPPkpdADKVANQSLLQLAFRTRIKLFYRPEGLNG-LPSDAPAALKWswatSA 170
Cdd:PRK15295  83 NSIRVIRSG-APLPADRESMYWLNIKGIPS---IDDNASANRVEISINTQIKLIYRPPALTKsTPDSQSQQLKW----QT 154
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446401685 171 GKTALRVANPTPYHVSFSSGDLvaNGKTYPlDVKMVAPLSEETFYIKgmSGKASSAKVHFFAINDFG 237
Cdd:PRK15295 155 AGDVITVNNPTPYYMNFASVTL--NSHEVK-SATFVPPKSSASFKLG--STAAPHGTVTWRLISDYG 216
PRK15211 PRK15211
fimbrial chaperone;
13-238 7.60e-33

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 119.16  E-value: 7.60e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  13 FATCmslsASAIADIVISGTRVIYKSNEKSVNVRLENKGNNPLLVQSWLDtgddSAEPGSITVPFTATPPVSRIDAKRGQ 92
Cdd:PRK15211  14 LAVC----GQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQTYGGQVWID----NTTQGSSTVYMVPAPPFFKVRPKEKQ 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  93 TIKLMYTASSpLPKDRESVFWFNVLEVPPKPDADKvanQSLLQLAFRTRIKLFYRPEGLNGLPSDAPAALKWSwaTSAGK 172
Cdd:PRK15211  86 IIRIMKTDSA-LPKDRESLFWLNVQEIPPKPKASE---GNVLAVALNTQVKLIYRPKALKEGRENAEKNLQII--HRGGE 159
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446401685 173 TALRvaNPTPYH-----VSFSSGDLVANGKTYPlDVKMVAPLSEETfyikgMSGKASSAKVHFFAINDFGG 238
Cdd:PRK15211 160 TYLK--NPTPYYfavtgVKLNGQPVKLSDRVMN-EIAQLAPFSEVS-----LGKLSLNGTVTVQAVNDWGG 222
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
11-238 1.61e-31

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 115.65  E-value: 1.61e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  11 VCFATCMSLSASAiaDIVISGTRVIYKSNEKSVNVRLENKGNNPLLVQSWLDTGDDSAEPGSitVPFTATPPVSRIDAKR 90
Cdd:PRK15299  10 LCCLLCGSLAHAA--GINIGTTRVIFHGDAKDASISISNSDNVPYLIQSWAQSISETGASGD--APFMVTPPLFRLNGGQ 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  91 GQTIKLMYTASSpLPKDRESVFWFNVLEVPPKPDADKvanQSLLQLAFRTRIKLFYRPEGLNGLPSDAPAALKWSwatSA 170
Cdd:PRK15299  86 KNVLRIIRTGGN-LPEDRESLYWLDIKSIPSSNPDNK---HNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWS---RQ 158
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446401685 171 GKTaLRVANPTPYHVSFSSGDLVANGKTYPldvKMVAPLSEETFYIKGmsgkASSAKVHFFAINDFGG 238
Cdd:PRK15299 159 GRT-LTVKNPTPYYMNFATLSVGSQKVKAP---RYVAPFGNAQYTLPA----AASGPIAWSIINDFGG 218
PRK15195 PRK15195
molecular chaperone FimC;
11-237 2.07e-31

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 115.34  E-value: 2.07e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  11 VCFATCMSLSASAIADIVISGTRVIYKSNEKSVNVRLENKGNNP-LLVQSWLDTGDDSAEPgsitvPFTATPPVSRIDAK 89
Cdd:PRK15195  11 IIFYLIISASVHAAGGIALGATRVIYPADAKQTSLAIRNSHTNErYLVNSWIENSSGVKEK-----SFIVTPPLFVSEPK 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  90 RGQTIKLMYtASSPLPKDRESVFWFNVLEVPpKPDADKVANQSLLQLAFRTRIKLFYRPEGLNGLPSDAPAALKWSWATS 169
Cdd:PRK15195  86 SENTLRIIY-AGPPLAADRESLFWMNVKAIP-SVDKNALEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSRSGN 163
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446401685 170 agktALRVANPTPYHVSFSsgDLVANGKTypLDVKMVAPLSEETFYI-KGMSGkassaKVHFFAINDFG 237
Cdd:PRK15195 164 ----HLKVHNPSPYYVTLV--NLQVGSQK--LGNAMIAPKVNSQIPLpSGVQG-----KLKFQTVNDYG 219
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
27-238 7.35e-28

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 106.79  E-value: 7.35e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  27 IVISGTRVIYKSNEKSVNVRLENkGNN--PLLVQSWLDtgDDSAepGSITVPFTATPPVSRIDAKRGQTIKLM-YTASSP 103
Cdd:PRK15274  28 IVPDRTRVIFNGNENSITVTLKN-GNAtlPYLAQAWLE--DDKF--AKDTRYFTALPPLQRIEPKSDGQVKVQpLPAAAS 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685 104 LPKDRESVFWFNVLEVPPKPDadkvaNQSLLQLAFRTRIKLFYRPEGL-NGLPSDAPAALKWSwATSAGKTALrVANPTP 182
Cdd:PRK15274 103 LPQDRESLFYFNVREIPPKSD-----KPNTLQLALQTRIKFFYRPVAVaRQVDKTHPWQTKLT-LTYQGDGVI-FDNPTP 175
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 446401685 183 YHVSFSSGDLVANGKTYPLDVKMVAPLSEETFYIKGMSgKASSAKVHFfaINDFGG 238
Cdd:PRK15274 176 FYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGAS-LGSSPVVGY--VDDYGG 228
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
11-216 1.15e-27

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 106.01  E-value: 1.15e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  11 VCFATCMSLSASAIADIVISGTRVIYKSNEKSVNVRLENKG-NNPLLVQSWLDTGDdsaepGSITVPFTATPPVSRIDAK 89
Cdd:PRK15254   2 ILLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDkTTPFLAQSWVTDAD-----GVRTDALMALPPLQRIDAG 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  90 RGQTIKLMYTA--SSPLPKDRESVFWFNVLEVPPKPDADKVanqslLQLAFRTRIKLFYRPEGLNGLPSDAPAAlKWSWA 167
Cdd:PRK15254  77 QKSQVRITQVRglTDKLPQDRETLFWFNVRGVPPKPEDDNV-----LQLAMQSQLKLFYRPKAIIRSSSDQPER-KLTAE 150
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446401685 168 TSAGKTALRvaNPTPYHVS--------------FSSGDLVANGKTYPLdvKMVAPLSEETFYI 216
Cdd:PRK15254 151 RNAGHLTLR--NPTPYYITvawlgadrshrlsgFREGVMVPPLGSLPL--KAVLPAETRTLWV 209
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
10-237 6.26e-27

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 104.01  E-value: 6.26e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  10 AVCFatCMSLSASAIADIVISGTRVIYKSNEKSVNVRLENKGNNPLLVQSWLDTGD---DSAEPGSITvPFTATPPVSRI 86
Cdd:PRK15192   9 AIYW--CLLPISWAQAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILPGGrwpGTKNEGNIT-PFVVTPPLFML 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  87 DAKRGQTIKLMYTASsPLPKDRESVFWFNVLEVPP-KPDADKVanqsllQLAFRTRIKLFYRPEGLNGLPSDAPAALKWS 165
Cdd:PRK15192  86 SARQENSMRVVYTGA-PLPADRESLFTLSIAAIPSgKPEANRV------QMAFRSALKLLYRPEGLAGNPQQAYRHLIWS 158
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446401685 166 wATSAGKTalrVANPTPYHVSFSSgdLVANGKTYPlDVKMVAPL-SEETFYIKgmsgKASSAKVHFFAINDFG 237
Cdd:PRK15192 159 -LTPDGAT---VRNPTPYYVTLFL--LRANERAQD-NAGVVAPFaTRQTDWCR----HTVRCTVRWQSINDYG 220
PRK15285 PRK15285
fimbrial chaperone StfD;
21-240 1.75e-26

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 102.94  E-value: 1.75e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  21 ASAIADIVISGTRVIYKSNEKSVNVRLENKGNN-PLLVQSWLDTgddsaEPG-SITVPFTATPPVSRIDAKRGQTIKLM- 97
Cdd:PRK15285  21 GSAQAAIAPDRTRLVFRGEDKSISVDLKNANSKlPYLAQSWVED-----EKGvKITSPLIVVPPVQRIEPSAIGQVKIQg 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  98 YTASSPLPKDRESVFWFNVLEVPPKPDadkvaNQSLLQLAFRTRIKLFYRPEGLNGLPSDAPaalkWSWATSAGK--TAL 175
Cdd:PRK15285  96 MPALASLPQDRETLFYYNVREIPPQSD-----KPNTLQIALQTRIKVFYRPQALSKIDMQHP----WQYKITLQRqgNGY 166
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446401685 176 RVANPTPYHVSFSSGDLVANGKT----YPLdvkMVAPLSEETfyIKGMSGKASSAKVHFFaINDFGGAI 240
Cdd:PRK15285 167 QVSNPTGYYVVLSNASNRMDGTPargfSPL---VIAPKSNVT--LGGDASELGHSPVLTY-VNDYGARL 229
PRK11385 PRK11385
fimbrial chaperone;
9-238 2.21e-26

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 102.52  E-value: 2.21e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685   9 AAVCFATCMSLSASAI-ADIVISGTRVIYKSNEKSVNVRLENKGNNPLLVQSWLD--TGDDSAEPGSITVPFTATPPVSR 85
Cdd:PRK11385   9 ALLIFAVLSLLVAGELqAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINrpTRWAGGEASTVPAPLLAAPPLIL 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  86 IDAKRGQTIKLMYTASSPLPKDRESVFWFNVLEVPpkpdADKVANQSLlQLAFRTRIKLFYRPEGLNGLPSDAPAALKWS 165
Cdd:PRK11385  89 LKPGTTGTLRLLRTESDILPVDRETLFELSIASVP----SGKVENQSV-KVAMRSVFKLFWRPEGLPGDPLEAYQQLRWT 163
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446401685 166 WATSagktALRVANPTPYHVSFSSgdLVANGKTYPlDVKMVAPLSE-ETFYIKGMsgkaSSAKVHFFAINDFGG 238
Cdd:PRK11385 164 RNSQ----GVQLTNPTPYYINLIQ--VSVNGKALS-NAGVVPPKSQrQTSWCQAI----APCHVAWRAINDYGG 226
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
14-238 9.06e-25

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 97.91  E-value: 9.06e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  14 ATCMSLSASAiADIVISGTRVIYKSNEKSVNVRLENKG-NNPLLVQSWLDTGDdsaepGSITVPFTATPPVSRIDAKRGQ 92
Cdd:PRK15188  17 AAGLSFAAQA-GGIALGATRVIYPQGSKQTSLPIINSSaSNVFLIQSWVANAD-----GSRSTDFIITPPLFVIQPKKEN 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  93 TIKLMYTASSpLPKDRESVFWFNVlEVPPKPDADKVANQSLlQLAFRTRIKLFYRPEGLNGLPSDAPAALKwswaTSAGK 172
Cdd:PRK15188  91 ILRIMYVGPS-LPTDRESVFYLNS-KAIPSVDKNKLTGNSL-QIATQSVIKLFIRPKNLAEAPAHAPSTLR----CRNER 163
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446401685 173 TALRVANPTPYHVSFSsgDLVANGKTYPldVKMVAPLSEETFyikgmsgKASSAKVHFFAINDFGG 238
Cdd:PRK15188 164 GQLTITNPSPYYVSMV--ELYSAGKKLP--NTMVPPKGAITL-------PATPGQVSLRTVNDFGA 218
PRK15224 PRK15224
pili assembly chaperone PapD;
20-238 5.24e-23

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 93.65  E-value: 5.24e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  20 SASAIADIVISGTRVIYKSNEKSVNVRLENKGNNPLLVQSWLDTGDDSAepgsiTVPFTATPPVSRIDAKRGQTIKLMYT 99
Cdd:PRK15224  23 LNTKSFSVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADKSS-----PAPFLVMPPLFRLEANQQSQLRIVRT 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685 100 ASSpLPKDRESVFWFNVLEVPP--KPDADKVANQSL-LQLAFRTRIKLFYRPEGLNGLPSDAPAALKWswaTSAGkTALR 176
Cdd:PRK15224  98 GGD-MPTDRETLQWVCIKAVPPenEPSDTQAKGATLdLNLSINVCDKLIFRPDAVKGTPEDVAGNLRW---VETG-NKLK 172
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446401685 177 VANPTPYHVSFSSgdlVANGKTYPLDVKMVAPLSEETFYIKGmsgkASSAKVHFFAINDFGG 238
Cdd:PRK15224 173 VENPTPFYMNLAS---VTVGGKPITGLEYIPPFADKTLNMPG----SAHGDIEWRVITDFGG 227
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
177-241 2.17e-17

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 73.84  E-value: 2.17e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446401685  177 VANPTPYHVSFSSGDLVANGKTYPLDVKMVAPLSEETFyiKGMSGKASSAKVHFFAINDFGGAIE 241
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGGKELALDPGMVAPFSSQTF--AGLPAPAAGGTVSYTYINDYGGIVP 63
PRK15233 PRK15233
fimbrial chaperone SefB;
32-201 7.54e-12

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 63.20  E-value: 7.54e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  32 TRVIYKSNEKSVNVRLENKGNNPLLVQSWLDTGDDSAEpgsitVPFTATPPVSRIDAKRGQTIKLMYTaSSPLPKDRESV 111
Cdd:PRK15233  47 TRVIYKEDAPSTSFWIMNEKEYPILVQTQVYNDDKSSK-----APFIVTPPILKVESNARTRLKVIPT-SNLFNKNEESL 120
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685 112 FWFNVLEVPPKPDADKVANQSL-----LQLAFRTRIKLFYRPEGLNGLPSDAPAALKwswaTSAGKTALRVANPTPYHVS 186
Cdd:PRK15233 121 YWLCVKGVPPLNDNESNNKNNIttnlnVNVVTNSCIKLIYRPKTIDLTTMEIADKLK----LERKGNSIVIKNPTSSYVN 196
                        170       180
                 ....*....|....*....|.
gi 446401685 187 FS---SGDL---VANGKTYPL 201
Cdd:PRK15233 197 IAnikSGNLsfnIPNGYIEPF 217
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
8-237 2.48e-10

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 58.51  E-value: 2.48e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685   8 TAAVCFATCMSLSAsaiADIVISGTRVIYKSNEKSVNVRLENKGNNP-LLVQSWLDTGDDSAepgsitVPFTATPPVSRI 86
Cdd:PRK09918  10 TALVLLSSSSAVHA---AGMVPETSVVIVEESDGEGSINVKNTDSNPiLLYTTLVDLPEDKS------KLLLVTPPVARV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685  87 DAKRGQTIKLMYTASSPLPKDRESVFWFNvlEVPPKPDadkvaNQSLLQLAFRTRIKLFYRPEglnGLP-SDAP-AALKW 164
Cdd:PRK09918  81 EPGQSQQVRFILKSGSPLNTEHLLRVSFE--GVPPKPG-----GKNKVVMPIRQDLPVLIQPA---ALPvVRDPwKLLVW 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446401685 165 SwaTSAGKtaLRVANPTPYHVSFS-------SGDLVANGKTYpldvkmvaPLSEETFYIKGMSGKASSAKVHFFAINDFG 237
Cdd:PRK09918 151 S--ISGNN--LVVSNPSPYVVRLGqqvillpSGKVVALPKPY--------ILPGESLTVAITNSKATDTKVRFFPASRYG 218
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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