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Conserved domains on  [gi|446404893|ref|WP_000482748|]
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MULTISPECIES: fimbria/pilus periplasmic chaperone [Enterobacteriaceae]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15285 super family cl33121
fimbrial chaperone StfD;
14-249 1.63e-101

fimbrial chaperone StfD;


The actual alignment was detected with superfamily member PRK15285:

Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 295.54  E-value: 1.63e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  14 ALALLATAVSFSSHASVTPDRTRLVFNESDKSISVTLRNNDPTLPYLAQSWIEDAKGNKISSPLAVLPPVQRIDAMMNGQ 93
Cdd:PRK15285  11 AVLLLLLGGYGSAQAAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKITSPLIVVPPVQRIEPSAIGQ 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  94 VKVQGLPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALENTSMKSPWQHKVTLIRNGQDFTVNN 173
Cdd:PRK15285  91 VKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALSKIDMQHPWQYKITLQRQGNGYQVSN 170

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446404893 174 PTPYYVIISNASAKKGGNPPAGFTPLMMEPKTSAPLN---AKMDSVPVLTYINDYGARMPLYFICTGNSCQVDEEQSRK 249
Cdd:PRK15285 171 PTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVTLGgdaSELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAKSRK 249
 
Name Accession Description Interval E-value
PRK15285 PRK15285
fimbrial chaperone StfD;
14-249 1.63e-101

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 295.54  E-value: 1.63e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  14 ALALLATAVSFSSHASVTPDRTRLVFNESDKSISVTLRNNDPTLPYLAQSWIEDAKGNKISSPLAVLPPVQRIDAMMNGQ 93
Cdd:PRK15285  11 AVLLLLLGGYGSAQAAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKITSPLIVVPPVQRIEPSAIGQ 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  94 VKVQGLPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALENTSMKSPWQHKVTLIRNGQDFTVNN 173
Cdd:PRK15285  91 VKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALSKIDMQHPWQYKITLQRQGNGYQVSN 170

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446404893 174 PTPYYVIISNASAKKGGNPPAGFTPLMMEPKTSAPLN---AKMDSVPVLTYINDYGARMPLYFICTGNSCQVDEEQSRK 249
Cdd:PRK15285 171 PTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVTLGgdaSELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAKSRK 249
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
10-232 6.53e-66

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 204.45  E-value: 6.53e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  10 IVVPALALLATAVSFSSHASVTPDRTRLVFNESDKSISVTLRNNDPTlPYLAQSWIEDAKGN----KISSPLAVLPPVQR 85
Cdd:COG3121    5 LRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDDWDQDagpdKATAPFVVTPPLFR 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  86 IDAMMNGQVKVQGLPdiNKLPADRESVFYFNVREIPPK---SNKPNTLQIALQTRIKLFWRPKALENTSMKspWQHKVTL 162
Cdd:COG3121   84 LEPGKSQTVRIIRTG--PPLPQDRESLFRLNVDEIPPKdasEEGKNTLQIALRTRIKLFYRPAGLKGSPED--AAEKLTW 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446404893 163 IRNGQDFTVNNPTPYYVIISNASAKKGGNPPAGFtPLMMEPKTSAPLNAKMDSVP------VLTYINDYGARMPLY 232
Cdd:COG3121  160 SLVGNGLTVTNPGPYYVTLSDLSLGAGGKKLKKG-LGMVLPGSTRRWPLPAGASLaaggkvTWATINDYGGAVPLE 234
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 30-147 2.60e-43

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 142.73  E-value: 2.60e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893   30 VTPDRTRLVFNESDKSISVTLRNNDPTlPYLAQSWIEDAKGN----KISSPLAVLPPVQRIDAMMNGQVKVQGLPDinKL 105
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDN-PYLVQSWVDDGNEEgtdeKAKAPFIVTPPLFRLEPGQEQVLRIYTTGP--PL 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 446404893  106 PADRESVFYFNVREIPPKSNKP---NTLQIALQTRIKLFWRPKAL 147
Cdd:pfam00345  78 PTDRESLFWLNVLEIPPKDKPKggqNGLQLALRSRIKLFYRPAGL 122
 
Name Accession Description Interval E-value
PRK15285 PRK15285
fimbrial chaperone StfD;
14-249 1.63e-101

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 295.54  E-value: 1.63e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  14 ALALLATAVSFSSHASVTPDRTRLVFNESDKSISVTLRNNDPTLPYLAQSWIEDAKGNKISSPLAVLPPVQRIDAMMNGQ 93
Cdd:PRK15285  11 AVLLLLLGGYGSAQAAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKITSPLIVVPPVQRIEPSAIGQ 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  94 VKVQGLPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALENTSMKSPWQHKVTLIRNGQDFTVNN 173
Cdd:PRK15285  91 VKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALSKIDMQHPWQYKITLQRQGNGYQVSN 170

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446404893 174 PTPYYVIISNASAKKGGNPPAGFTPLMMEPKTSAPLN---AKMDSVPVLTYINDYGARMPLYFICTGNSCQVDEEQSRK 249
Cdd:PRK15285 171 PTGYYVVLSNASNRMDGTPARGFSPLVIAPKSNVTLGgdaSELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAKSRK 249
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 16-248 4.98e-81

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 243.92  E-value: 4.98e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  16 ALLAT---AVSFSSHASVTPDRTRLVFNESDKSISVTLRNNDPTLPYLAQSWIEDAKGNKISSPLAVLPPVQRIDAMMNG 92
Cdd:PRK15274  11 ALIASvllAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDG 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  93 QVKVQGLPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALENTSMKS-PWQHKVTLIRNGQDFTV 171
Cdd:PRK15274  91 QVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKThPWQTKLTLTYQGDGVIF 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893 172 NNPTPYYVIISNASAKKgGNPPAGFTPLMMEP--KTSAPLN-AKMDSVPVLTYINDYGARMPLYFICTGNSCQVDEEQSR 248
Cdd:PRK15274 171 DNPTPFYLVISNAGSKE-NETASGFKNLLIAPreKVTSPIKgASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTR 249
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
10-232 6.53e-66

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 204.45  E-value: 6.53e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  10 IVVPALALLATAVSFSSHASVTPDRTRLVFNESDKSISVTLRNNDPTlPYLAQSWIEDAKGN----KISSPLAVLPPVQR 85
Cdd:COG3121    5 LRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDDWDQDagpdKATAPFVVTPPLFR 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  86 IDAMMNGQVKVQGLPdiNKLPADRESVFYFNVREIPPK---SNKPNTLQIALQTRIKLFWRPKALENTSMKspWQHKVTL 162
Cdd:COG3121   84 LEPGKSQTVRIIRTG--PPLPQDRESLFRLNVDEIPPKdasEEGKNTLQIALRTRIKLFYRPAGLKGSPED--AAEKLTW 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446404893 163 IRNGQDFTVNNPTPYYVIISNASAKKGGNPPAGFtPLMMEPKTSAPLNAKMDSVP------VLTYINDYGARMPLY 232
Cdd:COG3121  160 SLVGNGLTVTNPGPYYVTLSDLSLGAGGKKLKKG-LGMVLPGSTRRWPLPAGASLaaggkvTWATINDYGGAVPLE 234
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 15-240 1.40e-51

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 168.03  E-value: 1.40e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  15 LALLATAVSFSSHASVTPDRTRLVFNESDKSISVTLRNNDPTLPYLAQSWIEDAKGNKISSPLAvLPPVQRIDAMMNGQV 94
Cdd:PRK15254   3 LLALAAAWSQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVRTDALMA-LPPLQRIDAGQKSQV 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  95 K---VQGLPDinKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALENTSMKSPwQHKVTLIRNGQDFTV 171
Cdd:PRK15254  82 RitqVRGLTD--KLPQDRETLFWFNVRGVPPKPEDDNVLQLAMQSQLKLFYRPKAIIRSSSDQP-ERKLTAERNAGHLTL 158

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446404893 172 NNPTPYYVIISNASAKKgGNPPAGFTP-LMMEPKTSAPLNAKMDS---VPVLTYINDYGARMPLYFICTGNSC 240
Cdd:PRK15254 159 RNPTPYYITVAWLGADR-SHRLSGFREgVMVPPLGSLPLKAVLPAetrTLWVGYIDDYGGLQMNRYACDALNC 230
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 30-147 2.60e-43

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 142.73  E-value: 2.60e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893   30 VTPDRTRLVFNESDKSISVTLRNNDPTlPYLAQSWIEDAKGN----KISSPLAVLPPVQRIDAMMNGQVKVQGLPDinKL 105
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDN-PYLVQSWVDDGNEEgtdeKAKAPFIVTPPLFRLEPGQEQVLRIYTTGP--PL 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 446404893  106 PADRESVFYFNVREIPPKSNKP---NTLQIALQTRIKLFWRPKAL 147
Cdd:pfam00345  78 PTDRESLFWLNVLEIPPKDKPKggqNGLQLALRSRIKLFYRPAGL 122
PRK09926 PRK09926
fimbrial chaperone;
1-226 3.41e-42

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 144.09  E-value: 3.41e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893   1 MFNLTNTakivVPALALLATAVSFSSHASVTPDRTRLVFNESDKSISVTLRNNDpTLPYLAQSWIEDAKGN----KISSP 76
Cdd:PRK09926   2 FFNTKHT----TALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKG-NNPLLVQSWLDTGDDNaepgSIKVP 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  77 LAVLPPVQRIDAMMNGQVKVQGLPDiNKLPADRESVFYFNVREIPPKSNKP-----NTLQIALQTRIKLFWRPKALENTS 151
Cdd:PRK09926  77 FTATPPVSRIDPKRGQTIKLMYTAS-TALPKDRESVFWFNVLEVPPKPDAEkvanqSLLQLAFRTRIKLFYRPDGLKGNP 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893 152 MKSPWQHKVTLIRNGQD--FTVNNPTPYYVIISNASAKKGGNPpagfTPL---MMEPKTSAPLNAKMDSVPV----LTY- 221
Cdd:PRK09926 156 SEAPLALKWSWAGSEGKasLRVTNPTPYYVSFSSGDLEAGGKR----YPVdskMIAPFSDESMKVKGLSGKAssgkVHFy 231


                 ....*.
gi 446404893 222 -INDYG 226
Cdd:PRK09926 232 aINDFG 237
PRK15208 PRK15208
molecular chaperone LpfB;
9-227 2.95e-32

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 117.70  E-value: 2.95e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893   9 KIVVPALALLATAVSfSSHASVTPDRTRLVFNESDKSISVTLRNNDPTLPYLAQSWIEDAKGNKiSSPLAVLPPVQRIDA 88
Cdd:PRK15208   3 LISFTALALALIAQN-SFAGGVALSSTRVIYDGSKKEASLTVNNKSKTEEFLIQSWIDDANGNK-KTPFIITPPLFKLDP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  89 MMNGQVKVQGLPDinKLPADRESVFYFNVREIPPKSNK---PNTLQIALQTRIKLFWRPKALENTSMKSPWQHKVTliRN 165
Cdd:PRK15208  81 TKNNVLRIVNITN--TLPQDRESVYWINVKAIPAKSEDaenKNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRFT--RA 156

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446404893 166 GQDFTVNNPTPYYVIISNASAKKGGNPPAGFTPlmMEPKTSAPLNAKMDSVPVLTY--INDYGA 227
Cdd:PRK15208 157 GNQIKVENPSAFNLTFNQFYANGRDIEKAGMVP--AKGSLNIELPAGTGKVSEVKYniINDFGT 218
lfpB PRK15290
fimbrial chaperone;
1-227 1.05e-31

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 116.63  E-value: 1.05e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893   1 MFNLTNTAK---IVVPALALLATAVSFsshASVTPDRTRLVF--NESDKSISVTlrNNDPTLPYLAQSWIED-AKGNKIS 74
Cdd:PRK15290  10 LFKTTVSCKlftAIILSVFLGQPALTY---AGVVIGGTRVVYlsNNPDKSISVF--SKEEKIPYLIQAWVDPfNKEDKSK 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  75 SPLAVLPPVQRIDAMMNGQVKVQGLPDINkLPADRESVFYFNVREIPPK-SNK-PNTLQIALQTRIKLFWRPKAL----E 148
Cdd:PRK15290  85 APFTVIPPVSRLEPSQEKVLRIIHTKGVS-LPDDRESVFWLNIKNIPPSaSNKaTNSLEIAVKTRIKLFWRPASIrlipE 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893 149 NTSMKSPWQhkvtliRNGQDFTVNNPTPYYVIISNASAkKGGNPPAGftplMMEP--KTSAPLNAKMDSVPVL-TYINDY 225
Cdd:PRK15290 164 DAAPKVKWR------REGRNLIAENPNPIHISVMDVIV-DGHDVPLN----MIRPfeTLTLPLPANSAGGQMTwRFINDY 232


                 ..
gi 446404893 226 GA 227
Cdd:PRK15290 233 GA 234
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 16-226 6.33e-30

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 112.07  E-value: 6.33e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  16 ALLATAVSFSSHASVTPDRTRLVFNESDKSISVTLRNNDPTLPyLAQSWIEDAKGN----KISSPLAVLPPVQRIDAMMN 91
Cdd:PRK15253  21 AVLLSAIILPAHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQAS-LVQSWIDDGNTSlppeKIQVPFMLTPPVARVAAESG 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  92 GQVKVQGLPdiNKLPADRESVFYFNVREIPPKSNK---PNTLQIALQTRIKLFWRPKALENTSMKSpwQHKVTLIRNGQD 168
Cdd:PRK15253 100 QQIKIKKMP--NSLPDNKESLFYLNVLDIPPNSQEnagKNVLKFAMQNRIKLIWRPSRIAAVTKDS--FQRIGLFRSNKT 175

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893 169 FTVNNPTPYYVIISNAsakKGGNPPAGFTPLMMEPKTSAPLNAKMDSVPV--LTYINDYG 226
Cdd:PRK15253 176 VIMKNDTANWITVTDV---KAGNTKINDQTIMLPPLSTQNINMKYASTSQyeVTIIDDNG 232
PRK15195 PRK15195
molecular chaperone FimC;
9-230 3.23e-28

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 107.25  E-value: 3.23e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893   9 KIVVPALALLATAVSFSSHAS--VTPDRTRLVFNESDKSISVTLRNNDPTLPYLAQSWIEDAKGNKISSpLAVLPP--VQ 84
Cdd:PRK15195   4 KIKLGMIIIFYLIISASVHAAggIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGVKEKS-FIVTPPlfVS 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  85 RIDAMMNGQVKVQGLPdinkLPADRESVFYFNVREIPP----KSNKPNTLQIALQTRIKLFWRPKALENTSMKSPWQHKV 160
Cdd:PRK15195  83 EPKSENTLRIIYAGPP----LAADRESLFWMNVKAIPSvdknALEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKF 158

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446404893 161 TliRNGQDFTVNNPTPYYVIISNAS--AKKGGNppagftpLMMEPKTSA--PLNAKMDSVPVLTYINDYGARMP 230
Cdd:PRK15195 159 S--RSGNHLKVHNPSPYYVTLVNLQvgSQKLGN-------AMIAPKVNSqiPLPSGVQGKLKFQTVNDYGAVTP 223
PRK15211 PRK15211
fimbrial chaperone;
6-192 1.03e-27

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 105.67  E-value: 1.03e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893   6 NTAKIVVPALALLATavSFSSHASVTPDRTRLVFNESDKSISVTLRNNDPTLpYLAQSWIEDAKGNKISSPLAVLPPVQR 85
Cdd:PRK15211   2 KMMKWGLVSLLSLAV--CGQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQT-YGGQVWIDNTTQGSSTVYMVPAPPFFK 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  86 IDAmmnGQVKVQGLPDINK-LPADRESVFYFNVREIP--PKSNKPNTLQIALQTRIKLFWRPKALENTSMKSpwQHKVTL 162
Cdd:PRK15211  79 VRP---KEKQIIRIMKTDSaLPKDRESLFWLNVQEIPpkPKASEGNVLAVALNTQVKLIYRPKALKEGRENA--EKNLQI 153

                        170       180       190
                 ....*....|....*....|....*....|
gi 446404893 163 IRNGQDFTVNNPTPYYVIISNasAKKGGNP 192
Cdd:PRK15211 154 IHRGGETYLKNPTPYYFAVTG--VKLNGQP 181
PRK15249 PRK15249
fimbrial chaperone;
25-229 1.39e-27

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 106.04  E-value: 1.39e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  25 SSHASVTPDRTRLVFNESDKSISVTLRNNDpTLPYLAQSWIEDAKGN-----KISSPLAVLPPVQRIDAMmNGQVKVQGL 99
Cdd:PRK15249  25 ASWASVTILGSRIIYPSTASSVDVQLKNND-AIPYIVQTWFDDGDMNtspenSSAMPFIATPPVFRIQPK-AGQVVRVIY 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893 100 PDINKLPADRESVFYFNVREIPP----KSNKPNTLQIALQTRIKLFWRPKALEN-TSMKSPWQHKVTLIRNGQD-FTVNN 173
Cdd:PRK15249 103 NNTKKLPQDRESVFWFNVLQVPPtnigSDSGQNKMLVMLRSRIKLFYRPDGLGKpDNLAKKLQIKTVNKGSGKSgIVIVN 182

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446404893 174 PTPYYVIISNASAKKGGNPPAgFTPLMMEP-----------KTSAPLNAKMdsvpVLTYINDYGARM 229
Cdd:PRK15249 183 PQPWFASLSNLNVKVNGASYN-LDADMIAPfssqtwwlpgkRSLKSFSGTV----TVTLVNDQGARI 244
PRK15295 PRK15295
fimbrial assembly chaperone;
13-228 3.58e-27

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 104.26  E-value: 3.58e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  13 PALALLATAVSFSSHASVTPDRTRLVFNESDKSISVTLRNNDPTlPYLAQSWIEDAKGNKISS-PLAVLPPVQRIDAMMN 91
Cdd:PRK15295   4 KKSVLVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSK-ANLVQSWLSVVDPQVTNKqAFIITPPLFRLDAGQK 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  92 GQVKVqgLPDINKLPADRESVFYFNVREIPPKSNKP--NTLQIALQTRIKLFWRPKALENTSMKSpWQHKVTLIRNGQDF 169
Cdd:PRK15295  83 NSIRV--IRSGAPLPADRESMYWLNIKGIPSIDDNAsaNRVEISINTQIKLIYRPPALTKSTPDS-QSQQLKWQTAGDVI 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446404893 170 TVNNPTPYYVIISNASAKKGGNPPAGFTPlmmePKTSA--PLNAKMDSVPVLTY--INDYGAR 228
Cdd:PRK15295 160 TVNNPTPYYMNFASVTLNSHEVKSATFVP----PKSSAsfKLGSTAAPHGTVTWrlISDYGMS 218
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 23-230 2.96e-24

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 96.77  E-value: 2.96e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  23 SFSSHASVTPDRTRLVFNESDKSISVTLRNNDpTLPYLAQSWIEDAK--GNKISSPLAVLPPVQRIDAMMNGQVKVqgLP 100
Cdd:PRK15299  17 SLAHAAGINIGTTRVIFHGDAKDASISISNSD-NVPYLIQSWAQSISetGASGDAPFMVTPPLFRLNGGQKNVLRI--IR 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893 101 DINKLPADRESVFYFNVREIPPKS--NKPNTLQIALQTRIKLFWRPKALenTSMKSPWQHKVTLIRNGQDFTVNNPTPYY 178
Cdd:PRK15299  94 TGGNLPEDRESLYWLDIKSIPSSNpdNKHNTLMLAVKAEFKLIYRPKAL--TQKPEEVADRLTWSRQGRTLTVKNPTPYY 171

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446404893 179 VIISNAS--AKKGGNP----PAGFTPLMMEPKTSAPLnakmdsvpVLTYINDYGARMP 230
Cdd:PRK15299 172 MNFATLSvgSQKVKAPryvaPFGNAQYTLPAAASGPI--------AWSIINDFGGTGP 221
PRK15246 PRK15246
fimbrial assembly chaperone;
28-226 4.97e-22

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 90.79  E-value: 4.97e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  28 ASVTPDRTRLVFNESDKSISVTLRNNDPTlPYLAQSWIE----DAKGNKISSPLAVLPPVQRidaMMNGQVKVQG--LPD 101
Cdd:PRK15246  10 AAVNIDRTRIIFASDDVAQSLTLSNDNTT-PMLLQVWTDagniDASPDNSKTPLVALPPVFK---MQPGELRTLRllLSS 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893 102 INKLPADRESVFYFNVREIPPKS----NKPNTLQIALQTRIKLFWRPKALENTSMKSpwQHKVTLIRNGQDFTVNNPTPY 177
Cdd:PRK15246  86 RQQLATDRESLFWLNIYQIPPVTqdikNHPRKLVLPLRLRLKILIRPTGLKAPTEAE--EKKLRFIAKENTIRIVNPTSW 163

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 446404893 178 YVIISNASAKKggnppAGFTPLMMEPKTS--APLNAKMDSVPVLTY--INDYG 226
Cdd:PRK15246 164 YMSLTLTMDNK-----KSIGDIMVAPKTAldVPLTRSPTPGASINYavINDSG 211
PRK15218 PRK15218
fimbrial assembly chaperone;
15-226 6.06e-22

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 90.43  E-value: 6.06e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  15 LALLATAVSFSSHASVTPDRTRLVFNESDKSISVTLRNNDpTLPYLAQSWIEDAKGN----KISSPLAVLPPVQRIDAMM 90
Cdd:PRK15218   5 IALCLACAAMPAWSGIYIYGTRIIYPAQKKDITVQLMNDG-KRSSLIQAWIDNGDTSlppeKLQVPFIMTPPVIRVAANS 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  91 NGQVKVQGLPdiNKLPADRESVFYFNVREIPPKSNK---PNTLQIALQTRIKLFWRPKALENTSMKSpwQHKVTLIRNGQ 167
Cdd:PRK15218  84 GQQLKIKKLA--NNLPGDRESLFYLNVLDIPPNSDEnkdKNIIKFALQNRIKLIYRPPGVQKVDKAT--FSRLQLLRAPG 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893 168 DFTVNNPTPYYVIISNASAKKGGNPPAgftpLMMEPKTSAPLNAKMD-SVPVLTYINDYG 226
Cdd:PRK15218 160 SISVKNNSANWITIPEIKAKSKVNKET----LLLAPWSSQSITTTVVvNSYTVTLIDDSG 215
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 15-230 1.96e-19

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 84.04  E-value: 1.96e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  15 LALLATAVSFSSHAS-VTPDRTRLVFNESDKSISVTLRNNDPTLPYLAQSWIEDAKGNKiSSPLAVLPPVQRIDAMMNGQ 93
Cdd:PRK15188  13 LLLSAAGLSFAAQAGgIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSR-STDFIITPPLFVIQPKKENI 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  94 VKVQGLPDinKLPADRESVFYFNVREIPP-KSNK--PNTLQIALQTRIKLFWRPKALENTSMKSPwqhKVTLIRN--GQd 168
Cdd:PRK15188  92 LRIMYVGP--SLPTDRESVFYLNSKAIPSvDKNKltGNSLQIATQSVIKLFIRPKNLAEAPAHAP---STLRCRNerGQ- 165

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446404893 169 FTVNNPTPYYVIISN--ASAKKGGNPpagftplMMEPKTSAPLNAKMDSVPVLTyINDYGARMP 230
Cdd:PRK15188 166 LTITNPSPYYVSMVElySAGKKLPNT-------MVPPKGAITLPATPGQVSLRT-VNDFGATTP 221
PRK11385 PRK11385
fimbrial chaperone;
4-227 9.84e-17

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 76.71  E-value: 9.84e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893   4 LTNT-AKIVVPALALLATAVSFSSHASVTPDRTRLVFNESDKSISVTLRNNDptlpylAQSWIEDAKGNK---------- 72
Cdd:PRK11385   1 MTNTwNRLALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTS------QESWLINSKINRptrwaggeas 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  73 -ISSPLAVLPPVQRIDAMMNGQVKV-QGLPDInkLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALENT 150
Cdd:PRK11385  75 tVPAPLLAAPPLILLKPGTTGTLRLlRTESDI--LPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGD 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893 151 SMKSPWQHKVTliRNGQDFTVNNPTPYYVIISNASAKKGGNPPAGFTPLMMEPKTS-----APLNAKMDSvpvltyINDY 225
Cdd:PRK11385 153 PLEAYQQLRWT--RNSQGVQLTNPTPYYINLIQVSVNGKALSNAGVVPPKSQRQTSwcqaiAPCHVAWRA------INDY 224


                 ..
gi 446404893 226 GA 227
Cdd:PRK11385 225 GG 226
PRK15233 PRK15233
fimbrial chaperone SefB;
35-229 5.50e-15

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 72.06  E-value: 5.50e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  35 TRLVFNESDKSISVTLRNnDPTLPYLAQSWI-EDAKGNKisSPLAVLPPVQRIDAmmNGQVKVQGLPDINKLPADRESVF 113
Cdd:PRK15233  47 TRVIYKEDAPSTSFWIMN-EKEYPILVQTQVyNDDKSSK--APFIVTPPILKVES--NARTRLKVIPTSNLFNKNEESLY 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893 114 YFNVREIPP----KSNKPNTLQIALQTR------IKLFWRPKALENTSMKSpwQHKVTLIRNGQDFTVNNPTPYYVIISN 183
Cdd:PRK15233 122 WLCVKGVPPlndnESNNKNNITTNLNVNvvtnscIKLIYRPKTIDLTTMEI--ADKLKLERKGNSIVIKNPTSSYVNIAN 199

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 446404893 184 -ASAKKGGNPPAGFtplmMEPKTSAPLNAKMDSVPVLTYINDYGARM 229
Cdd:PRK15233 200 iKSGNLSFNIPNGY----IEPFGYAQLPGGVHSKITLTILDDNGAEI 242
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 14-179 1.44e-12

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 65.06  E-value: 1.44e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  14 ALALLATAVSFSSHA-SVTPDRTRLVFNESDKSISVTLRNNDPTlPYLAQSWIEDAKGNKiSSPLAVLPPVQRIDAmmnG 92
Cdd:PRK09918   9 FTALVLLSSSSAVHAaGMVPETSVVIVEESDGEGSINVKNTDSN-PILLYTTLVDLPEDK-SKLLLVTPPVARVEP---G 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  93 QvkVQGLPDI--NKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALENTsmKSPWQHkVTLIRNGQDFT 170
Cdd:PRK09918  84 Q--SQQVRFIlkSGSPLNTEHLLRVSFEGVPPKPGGKNKVVMPIRQDLPVLIQPAALPVV--RDPWKL-LVWSISGNNLV 158


                 ....*....
gi 446404893 171 VNNPTPYYV 179
Cdd:PRK09918 159 VSNPSPYVV 167
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
26-229 2.35e-12

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 64.72  E-value: 2.35e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  26 SHASVTPDRTRLVFNESDKSISVTLRNNDPTlpylaqSWIED-----------AKGNKISSPLAVLPPVQRIDAMMNGQV 94
Cdd:PRK15192  20 AQAGVVIGGTRFIYHAGAPALSVPVSNHSEA------SWLIDthilpggrwpgTKNEGNITPFVVTPPLFMLSARQENSM 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  95 KV--QGLPdinkLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALENTSMKSpWQHKV-TLIRNGQdfTV 171
Cdd:PRK15192  94 RVvyTGAP----LPADRESLFTLSIAAIPSGKPEANRVQMAFRSALKLLYRPEGLAGNPQQA-YRHLIwSLTPDGA--TV 166

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446404893 172 NNPTPYYVIISNASAKKGGNPPAGFTPLMMEPKTSAPLNAKMDSVPVLTyINDYGARM 229
Cdd:PRK15192 167 RNPTPYYVTLFLLRANERAQDNAGVVAPFATRQTDWCRHTVRCTVRWQS-INDYGRVM 223
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 171-230 8.14e-12

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 58.81  E-value: 8.14e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446404893  171 VNNPTPYYVIISNASAKKGGNPPAGFtPLMMEPKTSAPLNAKM----DSVPVLTYINDYGARMP 230
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGGKELALD-PGMVAPFSSQTFAGLPapaaGGTVSYTYINDYGGIVP 63
PRK15224 PRK15224
pili assembly chaperone PapD;
11-214 1.17e-11

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 62.45  E-value: 1.17e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  11 VVPALALLATAVSFSSHASVTPDRTRLVFNESDKSISVTLrNNDPTLPYLAQSWIEDAKGNKiSSPLAVLPPVQRIDAMM 90
Cdd:PRK15224  11 ITPVYAAEQKLNLNTKSFSVKLGATRVIYHAGTAGATLSV-SNPQNYPILVQSSVKAADKSS-PAPFLVMPPLFRLEANQ 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446404893  91 NGQVKVqgLPDINKLPADRESVFYFNVREIPPKSNKPNT--------LQIALQTRIKLFWRPKALENTSMKSpwQHKVTL 162
Cdd:PRK15224  89 QSQLRI--VRTGGDMPTDRETLQWVCIKAVPPENEPSDTqakgatldLNLSINVCDKLIFRPDAVKGTPEDV--AGNLRW 164

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 446404893 163 IRNGQDFTVNNPTPYYVIIsnASAKKGGNPPAG--FTPLMMEPKTSAPLNAKMD 214
Cdd:PRK15224 165 VETGNKLKVENPTPFYMNL--ASVTVGGKPITGleYIPPFADKTLNMPGSAHGD 216
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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