|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
1-663 |
0e+00 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 1362.26 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 1 MFRLNPFVRVGLCLSAISCAWPVLAVDDDGETMVVTASSVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLT 80
Cdd:PRK10064 1 MFRLNPFVRVGLCASAISCAWPVLAVDDDGETMVVTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 81 NEGDNRKGVSIRGLDSSYTLILVDGKRVNSRNAVFRHNDFDLNWIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKI 160
Cdd:PRK10064 81 NEGDNRKGVSIRGLDSSYTLILIDGKRVNSRNAVFRHNDFDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKKI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 161 GQKWSGTVTVDTTVQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDDPQNSTTTDTGETPRIEGFSSRDGNVE 240
Cdd:PRK10064 161 GQKWHGTVTVDTTIQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDDPQNSTTTDTGETPRIEGFTSRDGNVE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 241 FAWTPNQNHDFTAGYGFDRQDRDSDSLDKNRLERQNYSVSHNGRWDYGTSELKYYGEKVENKNPGNSSPITSESNTVDGK 320
Cdd:PRK10064 241 FAWTPNQNHDFTAGYGFDRQDRDSDSLDKNRLERQNYSLSHNGRWDYGNSELKYYGEKVENKNPGNSSPITSESNSIDGK 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 321 YTLPLTAINQFLTVGGEWRHDKLSDAVNLTGGTSSKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGEHWSPRAYL 400
Cdd:PRK10064 321 YTLPLTAINQFLTFGGEWRHDKLSDAVNLTGGTSSKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGDHWSPRAYL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 401 VYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGACKIVGSPDLKPETSESWELGLYYMGEEGWLEGVESSVTVFRN 480
Cdd:PRK10064 401 VYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGACKIVGSPDLKPETSESWELGLYYMGEEGWLEGVESSVTVFRN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 481 DVKDRISISRTSDVNAAPGYQNFVGFETGANGRRIPVFSYYNVNKARIQGVETELKIPFNDEWKLSINYTYNDGRDVSNG 560
Cdd:PRK10064 481 DVDDRISISRTSDVNAAPGYQNFVGFETNGRGRRVPVFRYYNVNKARIQGVETELKIPFNDEWKLSLNYTYNDGRDVSNG 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 561 ENKPLSDLPFHTANGTLDWKPLALEDWSFYVSGHYTGQKRADSATAKTPGGYTIWNTGAAWQVTKDVKLRAGVLNLGDKD 640
Cdd:PRK10064 561 ENKPLSDLPFHTANGTLDWKPLALEDWSFYVSGNYTGQKRADSATAKTPGGYTIWNTGAAWQVTKDVKLRAGVLNLGDKD 640
|
650 660
....*....|....*....|...
gi 446411422 641 LSRDDYSYNEDGRRYFMAVDYRF 663
Cdd:PRK10064 641 LSRDDYSYNEDGRRYFMAVDYRF 663
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
1-663 |
0e+00 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 565.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 1 MFRLNPFVRVGLCLSAISCAWPVLA---VDDDGETMVVTASSVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGV 77
Cdd:PRK13483 1 MKKYLAQVISALCLLPAVFVTHALAqaaPDKTMETVVVTASGYEQQIRDAPASISVITREDLENRFYRDLTDALLDVPGV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 78 QLTNeGDNRKGVSIRGLDSSYTLILVDGKRVNSRNAvfRHND----FDLNWIP-VDSIERIEVVRGPMSSLYGSDALGGV 152
Cdd:PRK13483 81 VVTG-GGDRTDISLRGMGSQYTLILVDGKRQSSRET--RPNSdgpgVEQAWTPpLAAIERIEVIRGPMSSLYGSDAIGGV 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 153 VNIITKKIGQKWSGTVTVDTTVQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDDpqnsttTDTGetprIEGF 232
Cdd:PRK13483 158 INIITRKVPNEWQGEVRLDTTLQENSDSGNVYQANFFVNGPLIKDLLGLQLYGQYTQREEDD------IEGG----YRDK 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 233 SSRDGNVEFAWTPNQNHDFTAGYGFDRQDRDSD--------------------SLDKNRLERQNYSVSHNGRWDYGTSE- 291
Cdd:PRK13483 228 DARSLTAKLALTPNEDHDIMLEVGTSNQERDSTvgktvaplapgescgrrgcpESSTTEYERSTVSLSHTGRWDFGTSDt 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 292 -LKYygEKVENKnpgnSSPITSESNTVDGKYTLPLtAINQFLTVGGEWRHDKLSDavnLTGGT-SSKTSAS--QYALFVE 367
Cdd:PRK13483 308 yIQH--EEFDNK----SREMKIKNTDFQSSLVAPL-GQEHTLTFGAAYNHQDLTD---ETSNQiSDLTDISrtQWAVFSE 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 368 DEWRIFEPLALTTGVRMDDHETYGEHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNScRGAcKIVGSPDL 447
Cdd:PRK13483 378 DEWRIADDFALTGGLRLDHDENFGGHVSPRVYGVWNLAPSWTVKGGVSTGFRAPSLRQTTPDWGQVS-RGG-NIYGNPDL 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 448 KPETSESWELGLYYmgeeGWLEGVESSVTVFRNDVKDRISISRTSDVNAAPGYQNFvgfetGANgrriPVfSYYNVNKAR 527
Cdd:PRK13483 456 KPETSLNKELGLYY----DLGSGLTASLTVFYNEFKDKITRVACPATQCTDGPNQF-----GAD----PT-TYVNIDEAV 521
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 528 IQGVETELKIPFNDEWKLSINYTYNDGRDVSnGENK--PLSDLPFHTANGTLDWKPlaLEDWSFYVSGHYTGQKRA---- 601
Cdd:PRK13483 522 TQGVEASLSYPITSTLSLSGNYTYTDSEQKS-GAYKgsPLNQLPKHLFQASLNWEP--TDRLNSWARVNYRGEESQpttg 598
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446411422 602 ---DSATAKTpggYTIWNTGAAWQVTKDVKLRAGVLNLGDKDLSRDDYSYNEDGRRYFMAVDYRF 663
Cdd:PRK13483 599 pssSSFIAPS---YTFLDLGANYQLTDNLKLSAGIYNLFDKEINYEEYGYVEDGRRYWLGMTYSF 660
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
14-663 |
2.47e-173 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 509.31 E-value: 2.47e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 14 LSAISCAWPVLAVDDDGETMVVTASSVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKgVSIRG 93
Cdd:PRK13513 19 ISSQAYAAEKTNTATPTDTMVVTASGFQQRIQDAPASISVVTREQLENKAYRDVTDALKDVPGVVVTGGGSTSD-ISIRG 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 94 LDSSYTLILVDGKRVNSRNAvfRHND----FDLNWIP-VDSIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWSGTV 168
Cdd:PRK13513 98 MAAKYTLILVDGKRVDTRST--RPNSdgsgIEQGWLPpLAAIERIEVVRGPMSSLYGSDAMGGVINIITRKVQKEWHGSL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 169 TVDTTVQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKRekddpqnstttdtGETPRIEGFSS---RDGNVEFAWTP 245
Cdd:PRK13513 176 RADATLQEDSKSGDIFQTNAYASGPLIDGLLGLKVSGLLSHR-------------SEDKIIDGYNEqrmRNGTATFSLTP 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 246 NQNHDFTAGYGFDRQDRDSD---------SLDKNRLERQNYSVSHNGRWDYGTSElkYYGEKVENKNPGNSspITSESNT 316
Cdd:PRK13513 243 DDNNEFDFEIGRYVQDRNSTpgrtlalngTNSDTQYDRNNYAITHNGYYDFGNST--SYIQRDETRNPSRQ--MKSVDTI 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 317 VDGKYTLPLTAinQFLTVGGEWRHDKLSDAVNLTGGTS--SKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGEHW 394
Cdd:PRK13513 319 FNTQTSFLLDD--HTLSLGGQYRYEELYDKGNQLPSASdlNKLTRWSWALFAEDEWQMTNDFALTGGIRMDQDQNYGTHW 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 395 SPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGACK--IVGSPDLKPETSESWELGLYYMGEegwlEGVE 472
Cdd:PRK13513 397 TPRLYGVWHLADQWTLKGGVSTGYRSPDLRQATDNWGQLTGGGGLPalILGNSDLKPEKSISQEIGILWDNQ----ENLN 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 473 SSVTVFRNDVKDRISISRTSDVNAAPGYQNFVGFETGANGRRIpvfsyyNVNKARIQGVETELKIPFNDEWKLSINYTYN 552
Cdd:PRK13513 473 ASVTLFNTDFKDKITEVRNCDTTNTDGQCVFNGINYDFISDRI------NVDKANMRGVEATFNWDINQAWSLATNYTFT 546
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 553 DGRDVS-NGENKPLSDLPFHTANGTLDWKplALEDWSFYVSGHYTG-----QKRADSATAkTPgGYTIWNTGAAWQVTKD 626
Cdd:PRK13513 547 QSEQKSgAFAGQPLNQMPKHMANATLNWQ--TTEDFATWIRINYRGktseyLNRTSMGSG-TP-SYTFVDLGASYQLTKE 622
|
650 660 670
....*....|....*....|....*....|....*..
gi 446411422 627 VKLRAGVLNLGDKDLSRDDYSYNEDGRRYFMAVDYRF 663
Cdd:PRK13513 623 LRLMGGVYNLLDKRVDIDVNDKVLDGRRYMVGASYDF 659
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
12-663 |
1.69e-152 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 456.78 E-value: 1.69e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 12 LCLSAISCAWPvlAVDDDGETMVVTASSVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNeGDNRKGVSI 91
Cdd:PRK13484 14 MCSAVISSGYA--SSDKKEDTLVVTASGFTQQLRNAPASVSVITSEQLQKKPVSDLVDAVKDVEGISITG-GNEKPDISI 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 92 RGLDSSYTLILVDGKRVNSRNAvfRHND---FDLNWIP-VDSIERIEVVRGPMSSLYGSDALGGVVNIITKKI-GQKWSG 166
Cdd:PRK13484 91 RGLSGDYTLILVDGRRQSGRES--RPNGsggFEAGFIPpVEAIERIEVIRGPMSSLYGSDAIGGVINIITKPVnNQTWDG 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 167 TVTVDTTVQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDdpqnSTTTDTGETpriegfSSRDGNVEFAWTPN 246
Cdd:PRK13484 169 VLGLGGIIQEHGKFGNSTTNDFYLSGPLIKDKLGLQLYGGMNYRKED----SISQGTPAK------DNKNITATLQFTPT 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 247 QNHDFTAGYGFDRQDRDS-------------DSLDKNRLERQNYSVSH-----NGRWDYGTSELKYYGEKV------ENK 302
Cdd:PRK13484 239 ESQKFVFEYGKNNQVHTLtpgesldawtmrgNLKQPNSKRETHNSRSHwvaawNAQGEILHPEIAVYQEKVirevksGKK 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 303 NPGNSSPITSES------NTV-DGKYT--LPltaiNQFLTVGGEWRHDKLSDAvNLTGGTSSKT---SASQYALFVEDEW 370
Cdd:PRK13484 319 DKYNHWDLNYESrkpeitNTIiDAKVTafLP----ENVLTIGGQFQHAELRDD-SATGKKTTETqsvSIKQKAVFIENEY 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 371 RIFEPLALTTGVRMDDHETYGEHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGACKIVGSPDLKPE 450
Cdd:PRK13484 394 AATDSLALTGGLRLDNHEIYGSYWNPRLYAVYNLTDNLTLKGGIAKAFRAPSIREVSPGFGTLTQGGASIMYGNRDLKPE 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 451 TSESWELGLYYMGEEGWlegvESSVTVFRNDVKDRISISRTSDVNAAPGyqnfvgfetgangrrIPVFSYYNVNKARIQG 530
Cdd:PRK13484 474 TSVTEEIGIIYSNDSGF----SASATLFNTDFKNKLTSYDIGTKDPVTG---------------LNTFIYDNVGEANIRG 534
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 531 VETELKIPFNDEWKLSINYTYNDGRDVSNGEN--------KPLSDLPFHTANGTLDWKplALEDWSFYVSGHYTGQ---- 598
Cdd:PRK13484 535 VELATQIPVYDKWHVSANYTFTDSRRKSDDESlngkslkgEPLERTPRHAANAKLEWD--YTQDITFYSSLNYTGKqiwa 612
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 599 -KRADSATAKTPGGYTIWNTGAAWQVTKDVKLRAGVLNLGD-KDLSRDDYSYN---EDGRRYFMAVDYRF 663
Cdd:PRK13484 613 aQRNGAKVPRVRNGFTSMDIGLNYQILPDTLINFAVLNVTDrKSEDIDTIDGNwqvDEGRRYWANVRVSF 682
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
14-663 |
2.49e-145 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 440.24 E-value: 2.49e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 14 LSAISCAWPVLAVDDD--------GETMVVTASsvEQNLKdAPAsISVITQEDLQRKPVQN-LKDVLKEVPGVQLT---- 80
Cdd:PRK13524 14 LGIYGVAQAAEAEDAKtddtpashEDTIVVTAA--EQNLQ-APG-VSTITAEDIRKRPPANdVSEIIRTMPGVNLTgnst 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 81 --NEGDNRKgVSIRGLDSSYTLILVDGKRVNSRNAVF------RHNDFDLNWIPVDSIERIEVVRGPMSSLYGSDALGGV 152
Cdd:PRK13524 90 sgQRGNNRQ-IDIRGMGPENTLILIDGKPVSSRNSVRygwrgeRDTRGDTNWVPPEMIERIEVLRGPAAARYGNGAAGGV 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 153 VNIITKKIGQKWSGTVTVDTTVQEHRDRGDTYNGQFFTSGPLIDGvLGMKAYGSLAKREKDDP-------QNSTTTDTGE 225
Cdd:PRK13524 169 VNIITKKPTGEWHGSWNTYFNAPEHKAEGATKRTNFSLSGPLGDE-LSFRLYGNLNKTQADAWdinqghqSARTGSYAGT 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 226 TP--RiEGFSSRDGNVEFAW--TPNQNHDFTAGYGF-------DRQDRDSDSLDK-------NRLERQNYSVSHNGRWDY 287
Cdd:PRK13524 248 LPagR-EGVINKDINGLLRWdfAPLQSLELEAGYSRqgnlyagDTQNTNSDALVKslygketNRMYRQNYALTHRGGWDN 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 288 GTSELKY--YgEKVENK--------------NPGNSSPITSESNTV--DGKYTLPLTA-INQFLTVGGEWRHDKLSDAVN 348
Cdd:PRK13524 327 GVSTSNYaqY-EHTRNSrlpeglaggtegifNEKATQFSTIDLDDVmlHSEVNLPFDLlVNQTLTLGTEWNQQRMKDPSS 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 349 LT--------------GGTSSKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGEHWSPRAYLVYNATDTVTVKGGW 414
Cdd:PRK13524 406 NTqaltsggaipgvsaTGRSPYSKAEIFSLFAEDNMELTDSTMLTPGLRFDHHSIVGNNWSPSLNLSQGLGDDFTLKMGI 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 415 ATAFKAPSLLQLSPDW----TSNSCRG----ACKIVGSPDLKPETSESWELGLYYMGeEGWLEGvessVTVFRNDVKDRI 486
Cdd:PRK13524 486 ARAYKAPNLYQTNPNYilysKGQGCYAsagnGCYLQGNDDLKAETSVNKEIGLEFKR-DGWLAG----LTWFRNDYRNKI 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 487 SisrtsdvnaaPGYqNFVGFETGANGRripVFSYYNVNKARIQGVETELKIPFNDEWKLSINYTYN-DGRDVSNGEnkPL 565
Cdd:PRK13524 561 E----------AGY-VPVGTNSVGKTD---IYQWENVPKAVVEGLEGTLNVPVSETVNWTNNLTYMlQSKNKTTGD--PL 624
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 566 SDLPFHTANGTLDWKplALEDWSFYVSG-----------HYTGQKRADSATaKTPGGYTIWNTGAAWQVTKDVKLRAGVL 634
Cdd:PRK13524 625 SIIPEYTLNSTLSWQ--ATEDLSLQSTFtwygkqkpkkyNYKGQPVTGSAT-KEVSPYSIVGLSATYDVTKNVSLTGGVD 701
|
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 446411422 635 NLGDKDLSRD--------------DYSYNEDGRRYFMAVDYRF 663
Cdd:PRK13524 702 NLFDKRLWREgnaqttgdliagagAYTYNEPGRTYYMSLNTHF 744
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
31-630 |
1.49e-141 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 426.20 E-value: 1.49e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 31 ETMVVTASSVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGD--NRKGVSIRGLDSSYTLILVDGKRV 108
Cdd:COG4771 28 EEVVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTRSGGrgGSSGISIRGLGGDRVLVLIDGVPV 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 109 NSRnavFRHNDFDLNWIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWSGTVTVDTTVQEHrdrgDTYNGQF 188
Cdd:COG4771 108 NNP---ALGGGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDELEGSVSLGYGSNGN----GTYSGSL 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 189 FTSGPliDGVLGMKAYGSLAKREKddpqnSTTTDTGETPRIEGFSSRDGNVEFAWTPNQNHDFTAGYGFDRQDRDSDSLD 268
Cdd:COG4771 181 SLGGP--GDKLSFLLSGSYRDRDG-----YLDYRNGGFVGNSGYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPT 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 269 KNRL--------------ERQNYSVSHNGRWDyGTSELKYYGEKVENKN--------PGNSSPITSESNTVDGKYTLPLT 326
Cdd:COG4771 254 LGDTeissdnagdrdtttDRGNYSLRYNGDLG-DNLDLSLYYSRTDRDStngslggsTGSFSDSDDTTYGLELDLTYPLG 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 327 AiNQFLTVGGEWRHDKLSDAVNLTGgtsSKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGE----HWSPRAYLVY 402
Cdd:COG4771 333 G-NHTLTLGAEYRYDDLDSSSFLGG---ADASRDTYGLFAQDEWKLTDKLTLTAGLRYDYYSTFGAsnytAFSPRLGLRY 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 403 NATDTVTVKGGWATAFKAPSLLQLSPDWTSNscrGACKIVGSPDLKPETSESWELGLYYmgeEGWLEGVESSVTVFRNDV 482
Cdd:COG4771 409 DLSDNLTLRASYGRGFRAPSLAELYGSGTGT---PGRYVLGNPDLKPETSDNYELGLEY---RLGNGGLSLSLTGFYTDI 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 483 KDRISISRTSDVNAApgyqnfvgfetgangrripVFSYYNVNKARIQGVETELKIPFNDEWKLSINYTYNDGRDVSNGEN 562
Cdd:COG4771 483 KDLIVLVPVGPGPGD-------------------VLQYENVGKARTYGLELELKYRLGKGLTLTASYTYLDSKIDDGDTG 543
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446411422 563 KPLSDLPFHTANGTLDWKPlaLEDWSFYVSGHYTGQKRADSATA---KTPGGYTIWNTGAAWQVTKDVKLR 630
Cdd:COG4771 544 EPLPNVPPHKANLGLDYRL--PKWWLLLLLTRYYGGRYVTPPSGrleGYTPGYTLLDLRASYKLTKNLTLS 612
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
10-663 |
1.64e-139 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 424.94 E-value: 1.64e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 10 VGLCLSAISCAWPVLAVDDDGETMVVTASSvEQNLKDAPaSISVITQEDLQRKP-VQNLKDVLKEVPGVQLTNE------ 82
Cdd:PRK13528 14 VLLVGLNSPVSAAESSDDDNGETMVVEATA-EQELKQQP-GVSIITAEDIKKRPpVNDLSDIIRKMPGVNLTGNsasgtr 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 83 GDNRKgVSIRGLDSSYTLILVDGKRVNSRNAVF------RHNDFDLNWIPVDSIERIEVVRGPMSSLYGSDALGGVVNII 156
Cdd:PRK13528 92 GNNRQ-IDIRGMGPENTLILIDGVPVTSRNSVRyswrgeRDTRGDTNWVPPEMVERIEVIRGPAAARYGSGAAGGVVNII 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 157 TKKIGQKWSGTVTVDTTVQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDDPQNSTTTDTGETPRIEGFSSRD 236
Cdd:PRK13528 171 TKRPTNDWHGSLSLYTNQPESSKEGATRRANFSLSGPLAGDALTMRLYGNLNKTDADSWDINSSAGTKNAAGREGVRNKD 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 237 GNVEFAW--TPNQNHDFTAG-------YGFDRQDRDS----DSLDK-----NRLERQNYSVSHNGRWDYGTSELKYYGEK 298
Cdd:PRK13528 251 INGVLSWkmTPQQILDFEAGysrqgniYAGDTQNSNSsavtESLAKsgketNRLYRQNYGLTHNGIWDWGQSRLGFYYEK 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 299 -------------VENKNPGNSSPITS--ESNTVDGKYTLPLTA-INQFLTVGGEWRHDKLSD--AVNLT------GGT- 353
Cdd:PRK13528 331 tnntrmneglaggGEGRITADQTFTTSrlESYRTSGELNVPLNWlFEQTLTVGAEWNRDELNDpsSTSLTvkdgdiGGIs 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 354 ------SSKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGEHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLS 427
Cdd:PRK13528 411 gsaadrSSKNKSEISALYVEDNIEPVPGTNLIPGLRFDYHSEFGSNWSPSLNLSQELGDYFKVKAGIARAFKAPNLYQSS 490
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 428 PDW----TSNSC-----RGACKIVGSPDLKPETSESWELGLYYmGEEGWlegvESSVTVFRNDVKDRIsISRTsdvnaap 498
Cdd:PRK13528 491 EGYllysRGNGCpkditSGGCYLVGNKNLDPEISVNKEIGLEF-TVDDY----HASVTYFRNDYQNKI-VAGD------- 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 499 gyqNFVGFEtgANGRRIpvFSYYNVNKARIQGVETELKIPF-NDEWKLSINYTYN-DGRDVSNGEnkPLSDLPFHTANGT 576
Cdd:PRK13528 558 ---DVIGRT--ASGAYI--LQWQNGGKAVVEGLEGNLLVPLmKDRLNWNTNATYMiTSEQKDTGN--PLSVIPKYTINST 628
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 577 LDWKplALEDWSFYVSGHYTGQKRADSATA-----------KTPGGYTIWNTGAAWQVTKDVKLRAGVLNLGDKDLSRDD 645
Cdd:PRK13528 629 LDWQ--ITQALSANVNWTLYGKQKPRTHAEsrseetgglsgKELGAYSLVGVNVNYDINKNLRLNVGVSNLFDKQIYREG 706
|
730 740
....*....|....*....|.
gi 446411422 646 ---YSYNEDGRRYFMAVDYRF 663
Cdd:PRK13528 707 egaNTYNEPGRAYYAGVTASF 727
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
50-663 |
2.29e-135 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 411.07 E-value: 2.29e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 50 SISVITQEDLQRKPVQNLKDVLKEVPGVQLT-NEGDNRKGVSIRGLDSSYTLILVDGKRVNSRNAvfrHNDFDLNWIPVD 128
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTrGGGGGGSTISIRGFGPDRTLVLVDGLPLASSNY---GRGVDLNTIPPE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 129 SIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWSGTVTVDTTVQEhrdRGDTYNGQFFTSGPL-IDGVLGMKAYGSL 207
Cdd:cd01347 78 LIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDN---SGSSGGGGFDVSGALaDDGAFGARLYGAY 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 208 AKREKDDPQNSTTTDTGEtpriegfSSRDGNVEFAWTPNQNH--DFTAGYGFDRQDRD---------------------- 263
Cdd:cd01347 155 RDGDGTIDGDGQADDSDE-------ERYNVAGKLDWRPDDDTrlTLDAGYQDQDADGPggtlpangtgsslgggpssntn 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 264 ---SDSLDKNRLERQNYSVSHNGRWDYGTSELKYYGEKVENKN------------------PGNSSPITSESNTVDGKYT 322
Cdd:cd01347 228 gdrDWDYRDRYRKRASLGLEHDLNDTGWTLRANLSYSYTDNDGdplilnggnnaaggdlgrSGYSSERDTTQLGFDAGLN 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 323 LPLTA--INQFLTVGGEWRHDKLsdavnltggtssktSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGE-------- 392
Cdd:cd01347 308 APFGTgpVAHTLTLGVEYRREEL--------------DEKQTALYAQDTIELTDDLTLTLGLRYDHYDQDSKdtiaggtt 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 393 ------HWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSnscrGACKIVGSPDLKPETSESWELGLYYMGEEG 466
Cdd:cd01347 374 akksysHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSH----GGTAAVGNPNLKPEKSKQYELGLKYDPGDG 449
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 467 WLegveSSVTVFRNDVKDRIsisrtsdvnaapgyqnfvgFETGANGRRIPVFSYYNVNKARIQGVETELKIPFNDEWKLS 546
Cdd:cd01347 450 LT----LSAALFRIDIKNEI-------------------VSTPTNTGLGLVTVYVNGGKARIRGVELEASYDLTDGLGLT 506
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 547 INYTYNDGRDV---SNGENKPLSDLPFHTANGTLDWKpLALEDWSFYVSGHYTGQKRADSATA---KTPGGYTIWNTGAA 620
Cdd:cd01347 507 GSYTYTDTEVKrtdGATTGNRLPGIPKHTANLGLDYE-LPDEGLTAGGGVRYRGKQYADTANGnntVKVPGYTLVDLSAS 585
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 446411422 621 WQVTKDVKLRAGVLNLGDKD-------LSRDDYSYNEDGRRYFMAVDYRF 663
Cdd:cd01347 586 YQFTKNLTLRLGVNNLFDKDyytslsvRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
16-661 |
5.06e-108 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 342.00 E-value: 5.06e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 16 AISC-AWPVLAVDDDGETMVVTASSVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKG--VSIR 92
Cdd:PRK13486 10 VIPClGFSASSIAAAEDVMIVSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVDVESGTGKTGGleISIR 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 93 GLDSSYTLILVDGKRVNSRNAVFRHNDFDLN---WIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWSGTVT 169
Cdd:PRK13486 90 GMPASYTLILIDGVRQGGSSDVTPNGFSAMNtgfMPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKWLSSVN 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 170 VDTTVQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKRekddpQNSTTT---DTGETPRIEGFSSRDGNV--EFAWT 244
Cdd:PRK13486 170 AGLNLQESNKWGNSSQFNFWSSGPLVDDSVSLQVRGSTQQR-----QGSSVTslsDTAATRIPYPTESQNYNLgaRLDWK 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 245 PNQNHDF-----TAGYGFDRQDRDSDSL----DKN-RLERQNYSVSHNGRWDYGTseLKYYGEKVENKNPGN---SSPIT 311
Cdd:PRK13486 245 ASEQDVLwfdmdTTRQRYDNRDGQLGSLtggyDRTlRYERNKISAGYDHTFTFGT--WKSYLNWNETENKGRelvRSVLK 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 312 S-------------ESNTVDGKYTLPLTAINQFLTVGGEWRHDKLSDAVNLtGGTSSKTSASQYALFVEDEWRIFEPLAL 378
Cdd:PRK13486 323 RdkwglagqprelkESNLILNSLLLTPLGESHLVTVGGEFQSSSMKDGVVL-ASTGETFRQKSWSVFAEDEWHLTDALAL 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 379 TTGVRMDDHETYGEHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGACKIVGSPDLKPETSESWELG 458
Cdd:PRK13486 402 TAGSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQLHKGISGVSGQGKTNLLGNPDLKPEESVSYEAG 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 459 LYYMGeegwLEGVESSVTVFRNDVKDRIsISRTSDVNAApgyqnfvgfetgangrripvfSYYNVNKARIQGVETELKIP 538
Cdd:PRK13486 482 VYYDN----PAGLNANVTGFMTDFSNKI-VSYSINDNTN---------------------SYVNSGKARLHGVEFAGTLP 535
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 539 -FNDEWKLSINYTYNDGRDvSNGENK--PLSDLPFHTANGTLDWKplALEDWSFYVSGHYTG---------------QKR 600
Cdd:PRK13486 536 lWSEDVTLSLNYTWTRSEQ-RDGDNKgaPLSYTPEHMVNAKLNWQ--ITEEVASWLGARYRGktprftqnysslsavQKK 612
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446411422 601 ADSATAKTPGGYTIWNTGAAWQVTKDVKLRAGVLNLGDKDLSrdDYSYNEDGRRYFMAVDY 661
Cdd:PRK13486 613 VYDEKGEYLKAWTVVDAGLSWKMTDALTLNAAVNNLLNKDYS--DVSLYSAGKSTLYAGDY 671
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
31-656 |
2.99e-92 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 299.05 E-value: 2.99e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 31 ETMVVTASSVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLDSSYT--LILVDGKRV 108
Cdd:COG1629 2 EEVVVTATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAGQISIRGFGGGGNrvLVLVDGVPL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 109 NSrnavFRHNDFDLNWIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWSGTVTVDTtvqehrDRGDTYNGQF 188
Cdd:COG1629 82 ND----PSGGDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASY------GSYGTYRASL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 189 FTSGPliDGVLGmkAYGSLAKREKDDPQNSTTTDTgetpriegfssRDGNVEFAWTPNQNHDFTAGYGFDRQDRDS---- 264
Cdd:COG1629 152 SLSGG--NGKLA--YRLSASYRDSDGYRDNSDSDR-----------YNLRAKLGYQLGDDTRLTLSASYSDSDQDSpgyl 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 265 ---------------DSLDKNRLERQNYSVSHNGRWDYGTSELK-----YYGEKVEN-----------KNPGNSSPITSE 313
Cdd:COG1629 217 tlaalrprgamddgtNPYSNDTDDNTRDRYSLSLEYEHLGDGLKlsasaYYRYDDTDldsdftptpadGGTLEQTDFDNR 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 314 SNTVDGKYTLPLT-AINQFLTVGGEWRHDKLSDA-----------VNLTGGTSSKTSASQYALFVEDEWRIFEPLALTTG 381
Cdd:COG1629 297 TYGLELRLTYDLGfGGKHTLLVGLDYQRQDLDGSgypldlgsgslPTLTSGADDDGTTTSLALYAQDTYKLTDKLTLTAG 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 382 VRMDDHETYGE----------------HWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNScrgackIVGSP 445
Cdd:COG1629 377 LRYDYVSYDVDdtvtgtdsasgsrsysAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYANGTDPY------SVGNP 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 446 DLKPETSESWELGLYYMGEEGWLEGvesSVTVFRNDVKDRIsisrtsdvnAAPGYQNFVGFETgangrripvfSYYNVNK 525
Cdd:COG1629 451 DLKPETSTNYELGLRYRLLDGRLSL---SLALFYSDVDNEI---------LSVPLPNDSGFST----------YYTNAGK 508
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 526 ARIQGVETELKIPFNDEWKLSINYTYNDGR------DVSNGENKPLSDLPFHTANGTLDWKPlaLEDWSFYVSGHYTG-Q 598
Cdd:COG1629 509 ARSYGVELELSYQLTPGLSLNASYSYTDAKfdddtdGSADLDGNRLPGVPPLTANLGLTYEF--PGGWSLGLGVRYVGdR 586
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*...
gi 446411422 599 KRADSATAKTPGGYTIWNTGAAWQVTKDVKLRAGVLNLGDKDLSRDDYSYNEDGRRYF 656
Cdd:COG1629 587 YLDDANTQGAPGGYTLVDLGAGYRFGDNLTLSLGVDNLFDKKYATSLSVRASNVRGFL 644
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
31-663 |
8.37e-75 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 253.08 E-value: 8.37e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 31 ETMVVTASSVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEG-DNRKGVSIRGLDSSYTLILVDGKRVN 109
Cdd:TIGR01785 2 DTVTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDVTGGGrPPGQSINIRGLQDNRVLVVVDGARQN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 110 SRNAVFRHNdfdLNWIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKI------GQKWSGTVTVDTTVQEHRDRGDt 183
Cdd:TIGR01785 82 YQRGGAHNG---SLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAadllrpGQLFGGLAKLSYGSNNNSFGGS- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 184 yngqFFTSGPLIDGVLGMKAYGslaKREKDDPQNStttdTGETPRIEGFSSRDGNVEFAWTPNQNHDFTAGYGFDRQDRD 263
Cdd:TIGR01785 158 ----VAVAGRLDDNLDALVAAT---YRDGGNYRNG----NKEEATNSAYVQKNLLAKLGWQLDDAQRLEFSYFTTEGSLD 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 264 -------SDSLDKNRL------ERQNYSVSHNGRWDYGTSEL-----KYYGEKVENKNPGNSSPITSESNTVDgkYTLPL 325
Cdd:TIGR01785 227 eaqnsgpGTEYVLGSSstllasSTRDRSATLTYNWTPEDNPWldataSLYYNRTENDNDRSARGVGREEGYQY--TTYGA 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 326 TAINQF---------LTVGGEWRHDKLS------DAVNLTGGTSSKTSASQYALFVEDEWRIF-EPLALTTGVRMD---- 385
Cdd:TIGR01785 305 TLQNTSrfdvaswstLTYGVDWMKDKRRtesfdpNSVTTIVPNPPSAKEYFFGLFLQDNIPLLdDRLTLSAGLRYDhykl 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 386 ---------DHETYGEHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGACKIVGSPDLKPETSESWE 456
Cdd:TIGR01785 385 spkttadteAVDRSYSRWSPSLGLSYKPVDWLTLYASYSQGFRAPSIDELYGTGDHPGTPGGYTFAPNPNLKPETSKTWE 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 457 LGLYYMGEEGWLEGVE--SSVTVFRNDVKDRISISRTSDVNaapgyqnfvgfetgANGRRIPVFSYYNVNKARIQGVETE 534
Cdd:TIGR01785 465 LGANLSFDNLLLDNDQlqFKVAYFYNDVKDFIDLTIGVTDN--------------VTAGMNNITQYVNIDGARIRGIEAS 530
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 535 LKIPFNDeWKLSINYTYNDGRDVSngENKPLSDLPFHTANGTLDWkplALEDWSFYVS---GHYTGQKRADSAT------ 605
Cdd:TIGR01785 531 ASYDAGL-WATGLSYGYTIGKDQN--TNQWLSNIPPLKLVVTVGY---RFPDRRLDLGakaAYYERQSESPTTEdvaang 604
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446411422 606 -AKTPgGYTIWNTGAAWQVT--KDVKLRAGVLNLGDKDLSR-DDYSYNEDGRRYFMAVDYRF 663
Cdd:TIGR01785 605 lLTTP-GYTVVDLYATYQPNavKGLTVRFGVNNLTDRKYTPaQSVPGAGPGRNFKGSVKYQF 665
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
31-663 |
1.53e-70 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 242.70 E-value: 1.53e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 31 ETMVVTASSVEQ----NLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEG-DNRKGVSIRGLDSSYTLILVDG 105
Cdd:TIGR01786 1 DTITVTATRTADpqrrDLSVTPASVSVISREQLKSQQVRNLRDLLRYEPGVSVVEGGrGGSQGINIRGLDKNRVAVLVDG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 106 KRVNSRNAVFRHNDFDLNWIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKI------GQKWSGTVTVDTTVQEHRD 179
Cdd:TIGR01786 81 IRQNTSYGGQGSTFYAINSIDPELIKSIEIVKGASSSLYGSGALGGVVAFRTKDAadllkpGKDLGGLSKLGYSSANNRF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 180 RGdtyNGQFFTSGPLIDGVLG-----MKAYGSLAKREKDDPQNSTttdtgeTPRIEGFSSRDGNVEFAWTPNQNHDFTAG 254
Cdd:TIGR01786 161 TQ---SVAAAGRNDDVDALVQatyrrGHELKNGNKANIGNESKRS------KPNPSDYKSQSFLAKLGWQLNDAHRLGLS 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 255 YGFDRQDRDSDS---------LDKNRL--------ERQNYSVSHNgrWDYG---------TSELKYYGEKVENKNPGNSS 308
Cdd:TIGR01786 232 LEYTQTDYDEPEmtntsyltkPLGAPLlsstvvlgDSKTRDRRTG--LDYElnpdnswldTVKLALDKQYIQLYNYLNAT 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 309 PItSESNTVDGKYT-------LPLTAINQFLTVGGEWRH------DKLSDAVNLTGGTSS----------------KTSA 359
Cdd:TIGR01786 310 SA-SDYPGVDKNGRykdkydyYTLGFDTNNKIEFSVHSLsltyglDRFKDKVSTGDSRRNlptaaynlygyegenrPVKG 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 360 SQYALFVEDEWRIFEPLALTTGVRMDDHETYGE---------------HWSPRAYLVYNATDTVTVKGGWATAFKAPSLL 424
Cdd:TIGR01786 389 SNFGLFLQDNIKLGDWLSLSAGLRYDHYKTDPKadeskdygaisktysRWSPSLGLTYKPTPWLTLYYSYSQGFRAPSFD 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 425 QLSpDWTSNSCRGACKIVGSPDLKPETSESWELGLYYMGEEGWLEgvessVTVFRNDVKDRISisrTSDVNAAPGYQNfv 504
Cdd:TIGR01786 469 ELY-GTGAHPGGGPYTFLPNPNLKPETSKNWEIGINLHFDQLDFK-----VSYFRNDYKDFID---LGIGVTAKGNMA-- 537
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 505 gfETGANGrripVFSYYNVNKARIQGVETELKIPFN------DEWKLSINYTYNDGRDVSNgeNKPLSDLPFHTANGTLD 578
Cdd:TIGR01786 538 --QVGSNT----ITNYVNIDNARIRGIELSGRYDLGsffsgpDGWTTTLKYGYTKGKDSDT--NPWLNAITPLKVVLGLG 609
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 579 WkPLALEDWSFYVSGHYTGQKRADSATA-------------KTPGGYTIWNTGAAWQVTKDVKLRAGVLNLGDKD----- 640
Cdd:TIGR01786 610 Y-DHPDEKWGVGLTLTFSGAKDAVDAYAtyyengeaakagpLRTPSYTVVDLYGYYKPNKNLTLRFGVYNLLDRKyttwe 688
|
730 740
....*....|....*....|....*..
gi 446411422 641 ----LSRDDYSYNEDGRRYFMAVDYRF 663
Cdd:TIGR01786 689 sarqAGPLATGYTAPGRNYKASVEYKF 715
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
31-663 |
6.80e-68 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 233.60 E-value: 6.80e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 31 ETMVVTASSVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGVS--IRGLDSSYTLILVDGKRV 108
Cdd:TIGR01779 29 DTVVVTANRFAQTASQTLAPVTIITRQDIERTQAKSLPELLRRLPGVSIAQNGGRGQNTSlfLRGTESDHVLVLIDGIRF 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 109 NSRNAvfrhNDFDLNWIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWSGTVTVDTTVQEHRDRGDTYNGQf 188
Cdd:TIGR01779 109 GSAAA----GAADFQQLPVELVERIEYVRGPRSSLYGSEAIGGVINIITRRRSGGQGTTLSAGLGSLDYQEYSIASGVA- 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 189 ftsgplidgvLGMKAYGSLAKREKDDPQNST--TTDTGETPRIEGFSSRDGNVEFAWTPNQNHD-FTAGYGFD-RQDRDS 264
Cdd:TIGR01779 184 ----------IGENGWYSVALGTESTKGINVrpGGPGVYDPDRDGFRSDSLLLGGGHRFDESWSlFVNALRYEnRNDYDN 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 265 DS-----LDKNRLERQNY-----------------SVSHNGRWDYGTSELKYYgekvenknpgnSSPITSESNTVDGKYT 322
Cdd:TIGR01779 254 YSfgtrlYKEAEKGDQSFtggrqrqserdvseltlSTGKSKDWDYAYSKGRYS-----------STSDTREQRNIQWQND 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 323 LpLTAINQFLTVGGEWRHDKLSDAVNLTGGTSSKTSAsqYALFVEdEWRIFEplaLTTGVRMDDHETYGEHWSPRAYLVY 402
Cdd:TIGR01779 323 L-LVGDGWVLAGGVDWQKDSIISSTADKEDDRSNTAA--FAQVLQ-QWGQQL---LEASLRRDDNQQFGSHTTGSIAWGY 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 403 NATDTVTVKGGWATAFKAPSLLQL-SPDWtsnscrgackivGSPDLKPETSESWELGLYymgeeGWLEGVESSVTVFRND 481
Cdd:TIGR01779 396 QFIEELRFTASYGTAFKAPNLNQLyYPSY------------GNPNLQPETSKSAELGFY-----GLFSGGKWSISGYRTK 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 482 VKDRIsisrtsDVNAAP-GYQNfvgfetgangrripvfsyyNVNKARIQGVE----TELKIpfndeWKLSINYTYNDGRD 556
Cdd:TIGR01779 459 INDLI------DYDSHPkGYPN-------------------NIGEARIKGVEataeFATGG-----WTHQLSVDLLDAQN 508
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 557 VSNGenKPLSDLPFHTANGTLDWkplALEDWSFYVSGHYTGqKRADSATAKTP------GGYTIWNTGAAWQVTKDVKLR 630
Cdd:TIGR01779 509 VNTG--NTLPRRARQMYKWNADR---AFEQFDWGASYQYVG-KRYDDDYNTYPtqnvrlGGYSLLDLRVSYYVTDSWTVQ 582
|
650 660 670
....*....|....*....|....*....|...
gi 446411422 631 AGVLNLGDKDLsRDDYSYNEDGRRYFMAVDYRF 663
Cdd:TIGR01779 583 GRIANLFDKDY-ETAYGYPQAGRAYYLSIRYQF 614
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
14-663 |
5.87e-67 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 232.51 E-value: 5.87e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 14 LSAISCAWPVLAVDDDG--ETMVVTAS-SVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGD--NRKG 88
Cdd:COG4772 5 LAAALLLAAAAAAEAATtlETVVVTGSrAAEARLKDVPGSVSVVDREELENQAATSLREVLRRVPGVNVQEEDGfgLRPN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 89 VSIRGLDSSYT---LILVDGKRVNSrnAVFRHNDFDLNwIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWS 165
Cdd:COG4772 85 IGIRGLGPRRSrgiTLLEDGIPIAP--APYGDPAAYYF-PDLERMERIEVLRGAAALRYGPQTVGGAINFVTRTIPTAFG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 166 GTVTVDTTvqehrdRGDTYNGQFFTSGPliDGVLGMKAYGSLAKRE--KDDpqnstttdtgetpriEGFSSRDGNVEFAW 243
Cdd:COG4772 162 GELRVTGG------SFGYRRTHASVGGT--VGNFGYLVEYSRKRGDgfRDN---------------SGFDINDFNAKLGY 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 244 TPNQNHDFTAGYGFDRQD--------------------RDSDSLDKnrlERQNYSVSHNGRW-DYGTSELKYYGE----- 297
Cdd:COG4772 219 RLSDRQELTLKFQYYDEDantpggltdaqfdadprqsyRPADQFDT---RRTQLSLRYEHQLsDNTTLTTTAYYNdfsrn 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 298 ---KVENKNPGN------SSPITSESNTVDGKYT--LPLTAINQFLTVGGEWRHD----------KLSDAVNLTGGTSSK 356
Cdd:COG4772 296 wyiRQNTADPNTpglglrGNPRGYRSYGIEPRLThrFELGGVPHTLEVGLRYHREeedrkqyvntYGQGRSGAGLRRDRR 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 357 TSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGE------------------HWSPRAYLVYNATDTVTVKGGWATAF 418
Cdd:COG4772 376 FSADALAAYAQNRFELTGRLTLTPGLRYEHIRRDRTdrystrtggddsgsnsysEFLPGLGLLYQLTDNLQLYANVSRGF 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 419 KAPSLLQLSPDWTSNscrgackivgsPDLKPETSESWELGLYYMGEEGWLegveSSVTVFRNDVKDRIsisrtsdvnaap 498
Cdd:COG4772 456 EPPTFGDLAYGNGGN-----------PDLKPEKSWNYELGTRGRIGNGLS----AEVALFYIDYDNEL------------ 508
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 499 gyqnfvGFETGANGRRIpvfSYYNVNKARIQGVETELKIPF----NDEWKLSINYTYNDGR-----DVSNGENkplsDLP 569
Cdd:COG4772 509 ------GSCSAAGGDRS---TFTNAGETRHQGLELALDYDLlkggGLGLPLFAAYTYTDAEftsdfGPVFAGN----RLP 575
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 570 F---HTANGTLDWKPlalEDWSFYVSGHYTGQKRADSATAKTPG------GYTIWNTGAAWQVTKDVKLRAGVLNLGDKD 640
Cdd:COG4772 576 YvprHQLTAGLGYEH---GGWTANLNGRYVSEQFTDAANTVADGsfgkipSYTVLDLSASYDFGKNLSLFAGVNNLFDKR 652
|
730 740
....*....|....*....|....*....
gi 446411422 641 ---LSRDDYSYNE---DGRRYFMAVDYRF 663
Cdd:COG4772 653 yiaSRAPNYAAGIrpgPPRTVYAGLRLKF 681
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
41-663 |
3.26e-60 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 212.82 E-value: 3.26e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 41 EQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQL-TNEGDNRKGVSIRGLDSSYTlILVDGKRVNSRNAvfrhnd 119
Cdd:COG4774 3 DTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFgAGEGGNGDSFSIRGFSASGD-IYVDGLRDPGQYR------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 120 fdlnwIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWSGTVTVDTtvqehrDRGDTYNGQFFTSGPLIDGVL 199
Cdd:COG4774 76 -----RDTFNLERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEPFTEVTLTY------GSDGQRRATLDVNGPLGDDLA 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 200 ----GMKaygslakrekddpqnstttDTGETPRIEGFSSRDG-NVEFAWTPNQNHDFTAGYGFDRQDRDSD----SLDKN 270
Cdd:COG4774 145 yrlnGMY-------------------RDSDSYRDGVDNDRWGiAPSLTWRLGDRTRLTLDYEYQDDDRTPDygvpAVANG 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 271 RLERQNYSVSHNGRWDYGTSELKYYGEKVENK-NPG------------NSSPITSESNTVDGKYTLPLTAINQF------ 331
Cdd:COG4774 206 RPVDVDRSTFYGQPDDYSDSETDSATLRLEHDfNDNwtlrnalrysdyDRDYRNTYPTGGNATGTVTRSAYRRDqdndtl 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 332 ------------------LTVGGEWRHDKLS----------DAVNL-------------TGGTSSKTSASQYALFVEDEW 370
Cdd:COG4774 286 snqtdltgkfdtggvkhtLLAGVEYSREDSDnarysgggtaPTVNLynpvygapvtgptLGGADNDSRTDTTGLYLQDTI 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 371 RIFEPLALTTGVRMD--------------DHETYGEHWSPRAYLVYNATDTVTVKGGWATAFKAPS-LLQLSPDwtsnsc 435
Cdd:COG4774 366 SLTDRWSLLAGLRYDrfdtdytdrttgatTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGgAPSLSNA------ 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 436 rgackivgSPDLKPETSESWELGLYYMGEEGWLEGvesSVTVFRndvkdrisISRTSDVNAAPGYQNFvgfetgangrri 515
Cdd:COG4774 440 --------GQALDPEKSRQYEVGVKWDLLDGRLSL---TAALFR--------IEKTNVRTTDPANPGV------------ 488
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 516 pvfsYYNVNKARIQGVETELKIPFNDEWKLSINYTYNDGRDVSNG----ENKPLSDLPFHTANGTLDWKpLALEDWSFYV 591
Cdd:COG4774 489 ----YVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSAnaanVGNRLPNVPRHSASLWTTYD-LPLPGLTLGG 563
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446411422 592 SGHYTGQKRADSA-TAKTPGgYTIWNTGAAWQVTKDVKLRAGVLNLGDKD----LSRDDYSYNEDGRRYFMAVDYRF 663
Cdd:COG4774 564 GVRYVGSRYADAAnTVKLPS-YTRFDAGASYRLNKNLTLRLNVNNLTDKRyyasAYGSGYVTPGAPRTVLLSASYRF 639
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
34-663 |
5.08e-60 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 213.60 E-value: 5.08e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 34 VVTASSVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQ-LTNEGDNRKGVSIRGLDSSYtlILVDGKRVNSRN 112
Cdd:COG4773 52 SSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGVTvSSYDGGGRDSFSIRGFSIDN--YLRDGLPLGGFG 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 113 AVFrhndfdlnwIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWSGTVTVDTtvqehrDRGDTYNGQFFTSG 192
Cdd:COG4773 130 GGQ---------PDTANLERVEVLKGPAGLLYGAGSPGGLVNLVTKRPTAEPQGEVSLSA------GSWDTYRATADVGG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 193 PLI-DGVLGMKAYGSlakrekddpqnsttTDTGETPRIEGFSSRD-GNVEFAWTPNQNHDFTAGYGFDRQDRDSDS---- 266
Cdd:COG4773 195 PLNeDGTLRYRLNAA--------------YEDGDSFRDGVDNRRTlIAPSLDWDLTDDTTLTLGAEYQDDDSTGDRgflp 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 267 -----------------LDKNRLERQNY------------SVSHNGRWDYGTSELKY-YGEKVENKNPGNSSPITSESNT 316
Cdd:COG4773 261 ldgtlldlprstnlgepWDYYDTETTTLfaelehrfnddwSLRANARYSDSDRDGRSaYAYGAPDAATGTLTRYASARDG 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 317 VDGKYTLPLTAINQF--------LTVGGEWRHDKL------SDAVNL------------TGGTSSKTSASQYALFVEDEW 370
Cdd:COG4773 341 DSRSDSLDANLNGKFetgglehtLLVGADYSRYDSdsdsatAGTINIynpvygnlpepdFDASDTDTTTRQTGLYAQDQI 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 371 RIFEPLALTTGVRMDDHETYGE-------------HWSPRAYLVYNATDTVTVKGGWATAFKApsllQLSPDWTSNScrg 437
Cdd:COG4773 421 SLTDRLSLLLGGRYDWYETDSTnrlggsttsyddsAFTPRAGLVYDLTPGLSLYASYSESFEP----QSGADNNGNP--- 493
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 438 ackivgspdLKPETSESWELGLYYMgeegWLEG-VESSVTVFRndvkdrisISRTSDVNAAPGYQNFvgfetgangrrip 516
Cdd:COG4773 494 ---------LDPETGKQYEAGVKGE----LFDGrLNATLAVFD--------ITQKNVATTDPDNPNF------------- 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 517 vfsYYNVNKARIQGVETELKIPFNDEWKLSINYTYNDGR---DVSNGENKPLSDLPFHTANGTLDWK--PLALEDWSFYV 591
Cdd:COG4773 540 ---YVQVGEVRSRGVELELSGELTPGLNLIAGYTYTDAKitkDADALEGKRLTNVPRHTASLWTTYRfpSGALKGLGLGG 616
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446411422 592 SGHYTGQKRADSATAKTPGGYTIWNTGAAWQVTKDVKLRAGVLNLGDKDL--SRDDYSYN--EDGRRYFMAVDYRF 663
Cdd:COG4773 617 GVRYVGERYGDAANTFTLPSYTLVDAGARYDLGKNWTLQLNVNNLFDKKYyaSSGSRGYVyyGAPRNVRLSLSYKF 692
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
12-663 |
2.01e-59 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 210.23 E-value: 2.01e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 12 LCLSAIScAWpvlAVDDDGETMVVTASSVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGVS- 90
Cdd:PRK10641 11 LSVTAFS-GW---AQDTSPDTLVVTANRFQQPVSTVLAPTTVVTRDDIDRWQSKSVNDVLRRLPGVDIAQNGGLGQLSSl 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 91 -IRGLDSSYTLILVDGKRVNSRNAVfrhNDFDLNWIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKigQKwSGTvT 169
Cdd:PRK10641 87 fIRGTNSSHVLVLIDGVRLNQAGIS---GSADLSQIPISLVQRIEYIRGPRSAVYGSDAIGGVVNIITTR--DK-PGT-T 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 170 VDTTVQEHRDRgdTYNGQffTSGPLIDGVLGMKAYGSLAKREKDDPQNSTTTDTGETPRiEGFSSRD--GNVEFAWtpNQ 247
Cdd:PRK10641 160 LSAGWGSNGYQ--NYDGS--TQQQLGDNTRVTLAGDYTYTKGFDVVAYGNTGTQAQPDR-DGFMSKTlwGGLEHQF--ND 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 248 NHD-FTAGYGFD-RQDRDSDSLDKNRL--ERQNYSVShngrWDYGtseLKYYGEKVenknpgNSSPITSESNTVD----- 318
Cdd:PRK10641 233 QWSgFVRGYGYDnRTDYDAYYSPGSPLidTRQLYSQS----WDAG---LRYNGGIY------SSQLIASYSHSKDynydp 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 319 --GKY--TLPLTAINQF--------------LTVGGEWRHDKL-SDAVNLTGGTSSKT-----SASQYalfvedewriFE 374
Cdd:PRK10641 300 hyGRYdsSATLDDMKQYnvqwgntvqvghgnISAGVDWQKQTTtPGTGYVPDGYDQRNtgiylTGQQQ----------IG 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 375 PLALTTGVRMDDHETYGEHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSpdwtsnscrgacKIVGSPDLKPETSES 454
Cdd:PRK10641 370 DVTLEGAARSDDNSQFGWHGTWQTSAGWEFIDGYRFIASYGTAFKAPNLGQLY------------GFYGNPNLKPEESKQ 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 455 WELGLyymgeEGWLEGVESSVTVFRNDVKDRISisrtsdvnaapgYQNFVGfetgangrripvfSYYNVNKARIQGVETE 534
Cdd:PRK10641 438 WEGGF-----EGLTGPVNWRLSGYRNDIDNLID------------YDDHTL-------------KYYNVGKATIKGVEWT 487
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 535 LKIpfnDEWKLS--INYTYNDGRDVSNgeNKPLSDLPFHTANGTLDWKPLALeDWSfyVSGHYTGQkRADSATAKTP--- 609
Cdd:PRK10641 488 GNF---DTGPLThqVTLDYVDPRNAIT--DEPLARRAKQQVKYQLDWQLYDF-DWG--VTYQYLGT-RYDKDYSTYPyqt 558
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*..
gi 446411422 610 ---GGYTIWNTGAAWQVTKDVKLRAGVLNLGDKDLsRDDYSYNEDGRRYFMAVDYRF 663
Cdd:PRK10641 559 vklGGVSLWDLAVSYPVTSHLTVRGKIANLFDKDY-ETVYGYQTAGREYTLSGSYTF 614
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
213-662 |
2.03e-53 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 190.75 E-value: 2.03e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 213 DDPQNSTTTDTGETPRIEGFSSRDGNVEFAWTPNQNHDFTAGYGFDRQDRDSDSLDknrlerQNYSVSHNGRWDYGTSEL 292
Cdd:pfam00593 25 TDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLST------LRLGLRYSSLDGDYTSNS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 293 KYYGEKVENKNPGNSSPITSESNTVDGKYTLPLTAI--NQFLTVGGEWRHDK-----LSDAVNLTGGTSSKTSASQYALF 365
Cdd:pfam00593 99 SGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSHDLLlgVELRTAGLDYRRLDddaydPYDPANPSSSSYSDTTTDSYGLY 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 366 VEDEWRIFEPLALTTGVRMDDHETYGE--------------HWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWT 431
Cdd:pfam00593 179 LQDNIKLTDRLTLTLGLRYDHYSTDGDdgngggdnfsrsysAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGS 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 432 SNScrGACKIVGSPDLKPETSESWELGLYYMGEEGWLegvesSVTVFRNDVKDRISISRTSDVNAAPGYQnfvgfetgan 511
Cdd:pfam00593 259 GGG--GGAVAGGNPDLKPETSDNYELGLKYDDGRLSL-----SLALFYIDIKNLITSDPDGPGLGGTVYT---------- 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 512 grripvfsYYNVNKARIQGVETELKIPFNDEWKLSINYTYNDGRDVSNG--ENKPLSDLPFHTANGTLDWKPlALEDWSF 589
Cdd:pfam00593 322 --------YTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDADAddTGNPLPNVPRHTANLGLTYDF-PLGGWGA 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 590 YVSGHYTGQ---KRADSATAKTPGGYTIWNTGAAWQVTKDVKLRAGVLNLGDKDLSR-------DDYSYNEDGRRYFMAV 659
Cdd:pfam00593 393 RLGARYVGSgerRYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKRyyssgggNLGGYPGPGRTFYLGL 472
|
...
gi 446411422 660 DYR 662
Cdd:pfam00593 473 SYK 475
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
33-323 |
1.26e-48 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 171.59 E-value: 1.26e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 33 MVVTASSVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEG--DNRKGVSIRGLDSSYTLILVDGKRVNS 110
Cdd:COG4206 1 VVVTATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSSGgpGSAASISIRGLGSNQTLVLIDGVPLND 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 111 RNavfrHNDFDLNWIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWSGTVTVDTTvqehrdRGDTYNGQFFT 190
Cdd:COG4206 81 PS----LGGVDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSASYG------SFGTRRLSASL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 191 SGPLIDGvlgmkAYGSLAKREKDDPQNSTTTDTGETPrieGFSSRDGNVEFAWTPNQNHDFTAGYGFDRQDRDSD-SLDK 269
Cdd:COG4206 151 SGGAGKF-----SYSLSASYRRSDGYRYNDPDLRNND---GYENTSLNARLGYKLGDNGSLSLSGGYSDSERGYPgAVGS 222
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 446411422 270 NRLERQNYSVSHNGRWDYGTSELKYYGEKVENKNPGNSSPITSESNTVDGKYTL 323
Cdd:COG4206 223 DRNLRLSLSLEYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGLSY 276
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
46-663 |
1.34e-47 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 177.99 E-value: 1.34e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 46 DAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLT-NEGDNRKG-VSIRGLDSSytlILVDGKRVNSRNAVFRHNDFdln 123
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGgSGGTTQFGnITIRGFGLE---VDIDNVYLDGVPLLSRGNLA--- 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 124 WIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWSGTVTVDTtvqehrDRGDTYNGQFFTSGPLI-DGVLGMK 202
Cdd:TIGR01783 75 IVDPAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGA------GTRSGYRTAFDLGGPLGaDGTFRGR 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 203 AYGSLAKREKDDPQNST------------------------------TTDTGETPRIEGFSSRDGNVEFAWTPNQNHDFt 252
Cdd:TIGR01783 149 LNGARQDGDSFYDGAGEetrlgatatdwqlddrtllrlgayyqkerdRGGYGGLPASGGTSGRDLSSDRYLGTSSNRNY- 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 253 agygFDRQDRDSDsLDKNRLERQNYSVSHNGRWDYGTSELKY-YGEKVENKNP--GNSSPITSES-------NTVDGKYT 322
Cdd:TIGR01783 228 ----DDREYLSYG-LSLEYQFNDVWTGKQNLRYSYFDTDSNQvQASGYSSDGGlfGRSLTVVNVKqdrvqidAGLDGEFE 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 323 lpLTAINQFLTVGGEWRHDK---------LSDAVNLTGGTSSK------------TSASQYALFVEDEWRIF--EPLALT 379
Cdd:TIGR01783 303 --TGPIEHDLLLGVSYGQRTtnrfnntgyPSDNIYSLTATSSArtdigdspkdraLSSTTKALNGVALQRILlaDKWTLT 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 380 TGVRMDDHETygEHWSPRAYLVYNATDTvTVKGGWATAFKAPSLLQLSPDWT----SNSCRGACKIVGSPDLKPETSESW 455
Cdd:TIGR01783 381 LGGRYDSVDV--KSNNGVAGSTGKRDDS-QFTPSLGVAYKPTDDWSLYASYAesfkPGGYYPKGAGNSGDILEPEKGKNY 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 456 ELGLYYMGEEGWLegveSSVTVFRNDVKDrisisrtsdvnaapgyqnfvGFETGANGRRIpvfsYYNVNKARIQGVETEL 535
Cdd:TIGR01783 458 ELGVRYDLGDSLL----ATAALFRITKDN--------------------QLVQDPVNGTF----SVNAGKTRNRGVELEA 509
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 536 K--IPFNDEWKLSINYTYNDGRDVSNGEN--KPLSDLPFHTANGTLDWKPLA-LEDWSFYVSGHYTGQKRADSATAKTPG 610
Cdd:TIGR01783 510 RgyLTPGLSLSAGYTYTDAEFTEDTNGDTqgNTVPFVPKHTASLWASYAPPVgDNGLTLGGGVQYTGKAYVDGGNTGKVP 589
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446411422 611 GYTIWNTGAAWQVTKDVKLRA--GVLNLGDKD-------LSRDDYSYNEDGRRYFMAVDYRF 663
Cdd:TIGR01783 590 SYTVVDLSVRYDLTKKKNLTLalNVNNLFDRDyytsgyrWGPSAYIYPGAPRTVGLSVSYDF 651
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
44-152 |
2.02e-35 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 129.31 E-value: 2.02e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 44 LKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNE-GDNRKGVSIRGLDSSYTLILVDGKRVNSRNavfrHNDFDL 122
Cdd:pfam07715 2 LRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGgGGGGSSISIRGFGSNRVLVLVDGVPLNSGG----GGSVDL 77
|
90 100 110
....*....|....*....|....*....|
gi 446411422 123 NWIPVDSIERIEVVRGPMSSLYGSDALGGV 152
Cdd:pfam07715 78 NSIDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
31-663 |
2.10e-26 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 115.12 E-value: 2.10e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 31 ETMVVTA--SSVEQNL---KDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLDSSYTLILVDG 105
Cdd:TIGR01782 2 DAVQVTGqrASLEKAIdakRDADSVVDVISAEDIGKLPDVNVAEALQRVPGVSIERDQGEGRYVSVRGLGPSYNRTTLNG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 106 KRVNSrnAVFRHNDFDLNWIPVDSIERIEVVRGPMSSLYGsDALGGVVNIITKKI--GQKWSGTVTVDTTVQEHRDrGDT 183
Cdd:TIGR01782 82 RTIAS--TDSGGRAFSLDLLPSELVSGVEVYKTPTADMDE-GGIGGTVDLRTRSPfdYDGRTLSGSAQGGYNDLAG-KDK 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 184 YNGQFFTSGPLIDGVLGMKAYGSLAKREKDDPQNSTTTDTGET-------------PRIEGFSSRDGNVE-------FAW 243
Cdd:TIGR01782 158 PGPRGAASYSWTFGDGQFGVLLSASYQKRDFAEDNVETENWGTytsadggaqglyfPRGVRYRSYRNDRErkgvngsLQW 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 244 TPNQNHDFTAG--YGFDRQDRDSDSLDKNRLERQNY-----SVSHNGRWDYGT-------SELKYYGEKVENK------- 302
Cdd:TIGR01782 238 RPSDALELYLDtlYSKYDDDETRQQIEFRTLNGGSTvitsnQTATSGALVQGTvanlqilVEARYNEEKETTTsltlgge 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 303 -----------------------------------------NPGNSSPITSESNTVDGKYTLPL---------------- 325
Cdd:TIGR01782 318 wtgdrwtldgdlgyskatrdrpdrvtrfftaptpgydfdyrGGPTLTLGTPADGDDASNYTNPAngelrrtqisyqkaed 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 326 -------------------------------------------TAINQFLTVGGE----------------WRHDKLSDA 346
Cdd:TIGR01782 398 sedaaqldatfdgpftslkfgvryrrrdktnrgsryrrsiigaTGASGLAGVPSDlagagldgglggpltgWDPADLDAF 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 347 VNLTGGTSSKTSASQYALFVEDEWRIFE---------------PLALTTGVR--------------------------MD 385
Cdd:TIGR01782 478 LNAARGDAAGGGTYTYASTAPNTYTVTEdttaayamanfdtglRLRGNVGVRyertdqtsdgwqsqpaangtgsvlvpVS 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 386 DHETYGeHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGACKIVGS---PDLKPETSESWELGL-YY 461
Cdd:TIGR01782 558 ADRDYT-DVLPSLNLAYDLTDDLVLRFAASKTITRPDFGDLAANTSLSDDGTGGTVTVSggnPDLKPYESDNLDLSLeWY 636
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 462 MGEEGWLegvesSVTVFRNDVKDRISISRTSDVNAAPGyqnfvgfetGANGRRIPVFSYYNVNKAR-IQGVETELKIPFn 540
Cdd:TIGR01782 637 FGPGGLL-----SAAVFYKDIKNFIVTTTSTETNDGGG---------GLVVAGVLVSRPVNGGKAGkIRGVELGYQQTF- 701
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 541 DEWK-------LSINYTYNDGR---DVSNGENK--PLSDLPFHTANGTLDWkplALEDWSFYVSGHYTGQKRADSATAKT 608
Cdd:TIGR01782 702 DFLPgplsgfgVQANYTYVDSEadpSVDGVQRRklPLPGLSKNTANATLYY---EKGGFSARLSYNYRSDYLLDVGGSNI 778
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 609 P------GGYTIWNTGAAWQVTKDVKLRAGVLNL---------GDKDLSRDdysYNEDGRRYFMAVDYRF 663
Cdd:TIGR01782 779 NrldryvDPRGQLDLSASYQVSDHLSLGLQASNLtnepsrwytGGKQRPRE---YVETGRTYMLGLRYKF 845
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
42-656 |
1.21e-15 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 80.62 E-value: 1.21e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 42 QNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQL--------TNEGDnrkGVSIRGLDSSYTlILVDGKRvnsrna 113
Cdd:PRK09840 66 QPLADTTQTITVISEQVIKDQGATNLTEALRNVPGVGTffagengnTTTGD---AIYMRGFDTSNS-IYVDGIR------ 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 114 vfrhndfDLNWIPVD--SIERIEVVRGPMSSLYGSDALGGVVNIITKK------------IGQKWSGTVTVDTT------ 173
Cdd:PRK09840 136 -------DIGSISRDtfNTEQVEVIKGPSGTDYGRSAPTGSINMISKQprndsgidasasIGSAWFRRGTLDVNqvigdt 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 174 --------VQEHRDRG-DTYNGQFFTSGPLIdgVLGMKAYGSLAKREKDDPQNSTTTDTGETPRIEGFSSRDGNVEFAWT 244
Cdd:PRK09840 209 tavrlnvmGEKTHDAGrDKVKNERYGVAPSV--AFGLGTANRLYLNYLHVTQNNTPDGGIPTIGLPGYSAPSAGRAALNH 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 245 PNQ--NHDFTaGYGFDRQDRDSDSLDKnRLERQ---NYSVSHNGRW-----DYGTSELKYYGEKVENKNPGN-------- 306
Cdd:PRK09840 287 AGKvdTHNFY-GTDSDYDDSTTDTATM-RFEHDindNTTLRNTTRWsrvkqDYLLTAIMGGASNITTPTPSDvntwtwsr 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 307 SSPITSESNTV-----DGKYTLPLTAINQFLTVGGEWRHDKLSD---------AVNL-------TG------GTSSKTSA 359
Cdd:PRK09840 365 TANTKDVSNKIltnqtNLTSTFYTGSIGHDVSTGVEFTRETQTNygvnpvtlpAVNLyhpdssiHPggltrnGANANGQT 444
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 360 SQYALFVEDEWRIFEPLALTTGVRMDDHET--------YGEHWSPRAYLVYNATDTVTV-----KGGWATAFKAPSLLQL 426
Cdd:PRK09840 445 DTFAIYAFDTLQLTRDWELNGGIRLDNYHTeydsatacGGSGRGAITCPAGVAKGSPVTtvdtaKSGNLVNWKAGALYKL 524
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 427 SPDWT--------------SN---SCRGACKIVGSPDLKPETSESWELGLYYMGEEgwlEGVESSVTVFRNDVKDRISis 489
Cdd:PRK09840 525 TENGNvyinyavsqqppggSNfalAQSGSGNSANRTDFKPQKANTSEIGTKWQVLD---KRLLLTAALFRTDIENEVE-- 599
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 490 rtsdvnaapgyQNFVGfetgangrripvfSYYNVNKARIQGVETELKIPFNDEWKLSINYTYND-----GRDVSNGENKP 564
Cdd:PRK09840 600 -----------QNDDG-------------TYSQYGKKRVEGYELSVAGNITPAWQVIAGYTQQKatvknGKDVAQDGSSS 655
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 565 LSDLPFHtangtldwkplALEDWSFY-------VSG--HYTGQKRADSATA-KTPG---GYTIWNTGAAWQVTKDVKLRA 631
Cdd:PRK09840 656 LPYTPEH-----------AFTLWSQYqatddlsVGGgaRYIGSMHRGSDGAvGTPAfteGYWVADAKLGYRVNRNLDLQL 724
|
730 740
....*....|....*....|....*..
gi 446411422 632 GVLNLGDKdlsrdDY--SYNEDGRRYF 656
Cdd:PRK09840 725 NVYNLFDT-----DYvaSINKSGYRYH 746
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
36-193 |
2.78e-12 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 69.93 E-value: 2.78e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 36 TASSVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEG-DNR-KGVSIRGLDSSYTLILVDGKR-VNSRN 112
Cdd:PRK14049 68 TGAKVDTPFLETPQSISSVTEQQLKDRNPQTLLETLAYTPGARVGAFGfDPRfDAFFVRGFDVTYTGVFRDNLRqPGASS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 113 AVFRHNDFdlnwipvdSIERIEVVRGPMSSLYGSDALGGVVNIITKKigqkwsGTVTVDTTVQEHRDRGDTYNGQFFTSG 192
Cdd:PRK14049 148 SIFKTEPY--------GLEGVSILRGPSSALYGASGAGGLFNLITKR------PTEEPLREVQVQYGTNNRYQGQFDFSG 213
|
.
gi 446411422 193 P 193
Cdd:PRK14049 214 P 214
|
|
| OM_channels |
cd01345 |
Porin superfamily. These outer membrane channels share a beta-barrel structure that differ in ... |
397-659 |
2.79e-12 |
|
Porin superfamily. These outer membrane channels share a beta-barrel structure that differ in strand and shear number. Classical (gram-negative ) porins are non-specific channels for small hydrophillic molecules and form 16 beta-stranded barrels (16,20), which associate as trimers. Maltoporin-like channels have specificities for various sugars and form 18 beta-stranded barrels (18,22), which associate as trimers. Ligand-gated protein channels cooperate with a TonB associated inner membrane complex to actively transport ligands via the proton motive force and they form monomeric, (22,24) barrels. The 150-200 N-terminal residues form a plug that blocks the channel from the periplasmic end.
Pssm-ID: 238655 [Multi-domain] Cd Length: 253 Bit Score: 67.46 E-value: 2.79e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 397 RAYLVYNATDTVTVKGGWATAFKAPSLLQLSPdwtsnscrgackivGSPDLKPETSESWELGLYYMGEEGWLEGVessvT 476
Cdd:cd01345 14 RQGLGQTPDDDLTLK*GYARANKAPSLYQTNP--------------GNDDAKAETSDGKEIGLEFKRDGGWLAGV----T 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 477 VFRNDVKDRISisrtsdvnaapgyQNFVGFETGANGRRIpvFSYYNVNKARIQGVETELKIPFNDEWKLSINYTYNDGrd 556
Cdd:cd01345 76 YARNDYTNKIE-------------AGYVAVGQNAVGTDL--YQWDNVPKAVVEGLEGSLNVPVSETV*WTNNYTY*LK-- 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 557 vSNGENKPLSDLPFHTANGTLDWKplalEDWSFYVSGHYTGQKRADSATAKTPGGYTIWNTGAAWQVTKDVKLRAGVLNL 636
Cdd:cd01345 139 -SENKTTRLSIIPEYTLNVTLSWQ----AREDLS*QVTYTWYKKQQPKKYKEIDPYSIVGLSATWDVTKNVSLTGGYDNL 213
|
250 260 270
....*....|....*....|....*....|....*....
gi 446411422 637 GDKDLSRDD----------------YSYNEDGRRYFMAV 659
Cdd:cd01345 214 FDKRLWRAGnaqttgdanyiagagaYTYNEPGDTWY*GV 252
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
8-159 |
1.32e-11 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 67.86 E-value: 1.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 8 VRVGLCLSAIScAWPVLAVDDDGETMVVTASSVEQN-----------------------LKDAPASISVITQEDLQRKPV 64
Cdd:PRK10044 18 VVVATAVSGMS-VYAQAAVEPKEETITVTAAPAPQEsawgpaatiaakrsatgtktdtpIEKTPQSISVVTAEEMALHQP 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 65 QNLKDVLKEVPGVQLTNEGDNR--KGVSIRGLDSS--YTLILVDGKRVNSRNavfrHNDFDLNwiPVdSIERIEVVRGPM 140
Cdd:PRK10044 97 KSVKEALSYTPGVSVGTRGASNtyDHLIIRGFAASgqSQNNYLDGLKLQGNF----YNDAVID--PY-MLERAELMRGPV 169
|
170
....*....|....*....
gi 446411422 141 SSLYGSDALGGVVNIITKK 159
Cdd:PRK10044 170 SVLYGKSNPGGLLNMVSKR 188
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
36-609 |
1.51e-09 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 60.97 E-value: 1.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 36 TASSVEQNLKDAPASISVITQEDLQ-RKPVQNLKDVLKEVPGV---QLTNEGDNrKGVSIRGLDSSYTLILVDGKRVNSr 111
Cdd:PRK14050 68 TGSKTDTPITEIPQSVSVVGRQEMDdRGVTNKVDEALRYTPGVlsqPFGTDGDT-DWFYIRGFDATQTGVFLDGLNLFS- 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 112 navfrhndFDLNWIPVDS--IERIEVVRGPMSSLYGSDALGGVVNIITKK----------IGQKWSGTVTVDTtvqehrD 179
Cdd:PRK14050 146 --------YGFGGFQIDPfmLERVEVLKGPASVLYGGSNPGGIVNMVSKRpldeplyyteIGINSYGNAFTGF------D 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 180 RGDTYNGQFFTSGPLIDGVLGMKAYGSLAK--REKDDPQNSTTTDTGETPRIEG-FSSRDgnvefawtpnQNHD---FTA 253
Cdd:PRK14050 212 VGDKLSDDGTVRYRVTGKVAGGDNYSDYSEdlRGFIMPQITYAPDDATSLTVYGyLSGLD----------QVHVgngFLP 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 254 GYG------FDRQDRDS----DSLDKNRLERQ--NYSVSH----------NGRWDYGTSELKY-YGEKVENKNPGNSSPI 310
Cdd:PRK14050 282 YVGtvvdapFGKIDRDAfygePDIDNGSYAQQmlGYEFSHefdngwtfsqNARYGHLHKHEKGpYTYGYVGGATGLPDPT 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 311 TSESN----------TVDG-------KYTLPLTAINQFLTVGGEWRHDKLS-----------DAVNLTGGTSSKTSA--- 359
Cdd:PRK14050 362 GPDYMlnrigfehrsKVDSfsidnrlEGEFDTGALTHNLLFGLDYKYYRLDqvqaccgatpiSATNPVYGTTQGANFvyl 441
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 360 ------SQYALFVEDEWRIFEPLALTTGVRMD------------DHETYGEHWSPRAYLVYNATDTVTVKGGWATAFkap 421
Cdd:PRK14050 442 dqiltqQQIGIYAQDQIRFGDGWLVTLNGRYDyvdtdsdarigtSYESNDGALSGRAGLAYEFDNGLTPYVSAATFF--- 518
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 422 sllqlspdwtsNSCRGAckIVGSPDLKPETSESWELGLYYmgEEGWLEGVESSvTVFRNDvKDRISIsrtsdvnAAPGyq 501
Cdd:PRK14050 519 -----------NPLVGT--LASGPPLKPEEGEQYEAGIKY--EPSFIDGLITA-SVFQIT-KKNVTV-------TDPL-- 572
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 502 nfvgfetgangrripVFSYYNVNKARIQGVETELKIPFNDEWKLSINYTYNDgRDVSNGENKPLSD-----LPFHTANGT 576
Cdd:PRK14050 573 ---------------TFASTQLGEVRSRGFELEGKVNLDDNWKALASFTYTD-LEITEDANPSLIGnspylVPETQASLW 636
|
650 660 670
....*....|....*....|....*....|....*.
gi 446411422 577 LDWKPL--ALEDWSFYVSGHYTGQKRADSA-TAKTP 609
Cdd:PRK14050 637 LDYAVTdgAFEGVSLGAGVRYQGESWADEAnTLKVP 672
|
|
| OMP_RagA_SusC |
TIGR04056 |
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade ... |
50-174 |
7.45e-08 |
|
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 274948 [Multi-domain] Cd Length: 981 Bit Score: 55.67 E-value: 7.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 50 SISVITQEDLQRKPVQNLKDVLK-EVPGVQLTNE----GDNRKgVSIRGLdSSYT-----LILVDGkrvnsrnaVFRhnD 119
Cdd:TIGR04056 97 AVSTVKAKELKKVPVSNLSNALQgKVAGVIITQSsgepGGDAE-IWIRGI-SSFGgnnspLYVIDG--------VPR--D 164
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 446411422 120 FDLNWIPVDSIERIEVVRGPMS-SLYGSDALGGVVnIITKKIGQKWSGTVTVDTTV 174
Cdd:TIGR04056 165 NGLSDLNPEDIESISVLKDASAtAIYGSRGANGVI-LITTKRGKEGKPKISYNAEF 219
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
374-663 |
2.18e-07 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 54.10 E-value: 2.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 374 EPLALTTGVRMD----DHETYG---EHWSPRAYLVYNATDTvtvkggWATAFKAPSLLQLSPDWTSNScrgackivgsPD 446
Cdd:PRK10003 465 DPLHLILGARYTnwrvDTLTYSmekNHTTPYAGLVYDINDN------WSTYASYTSIFQPQNDRDSSG----------KY 528
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 447 LKPETSESWELGLyymgEEGWLEG-VESSVTVFRNDvKDRISISRTSDVnaapgyqnfvgfeTGANGRripvFSYYNVNK 525
Cdd:PRK10003 529 LAPITGNNYELGL----KSDWMNSrLTTTLAIFRIE-QDNVAQSTGTPI-------------PGSNGE----TAYKAVDG 586
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446411422 526 ARIQGVETELKIPFNDEWKLSIN---YTYNDGRDVSNGENKP-----------LSDLPFHTANGTLDWKPLALEDwsfyV 591
Cdd:PRK10003 587 TVSKGVEFELNGAITDNWQLTFGatrYIAEDNEGNAVNPNLPrttvklftryrLPVMPELTVGGGVNWQNRVYTD----T 662
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446411422 592 SGHYtGQKRADSataktpGGYTIWNTGAAWQVTKDVKLRAGVLNLGDKdlsrdDYSYNEDG-------RRYFMAVDYRF 663
Cdd:PRK10003 663 VTPY-GTFRAEQ------GSYALVDLFTRYQVTKNFSVQGNVNNLFDK-----TYDTNVEGsivygapRNFSITATYQF 729
|
|
| |
