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Conserved domains on  [gi|446450984|ref|WP_000528839|]
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MULTISPECIES: glucosaminidase domain-containing protein [Salmonella]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Glucosaminidase pfam01832
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This family includes ...
 27-61 2.02e-07

Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyse peptidoglycan.


:

Pssm-ID: 460354 [Multi-domain]  Cd Length: 91  Bit Score: 46.41  E-value: 2.02e-07
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 446450984   27 IANQLEVPVEFILAVAAKESRYGQGRIATEYNNFF 61
Cdd:pfam01832   7 AAKKYGIPASVLLAQAALESGWGTSRLAKESNNLF 41
FlgJ super family cl43493
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell ...
 16-144 5.35e-07

Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility];


The actual alignment was detected with superfamily member COG1705:

Pssm-ID: 441311 [Multi-domain]  Cd Length: 276  Bit Score: 47.66  E-value: 5.35e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446450984  16 FIQKYKNDCEIIANQLEVPVEFILAVAAKESRYGQGRI-ATEYNNFFSMHGPAPLQLSKV------HPQGshdVWVAT-- 86
Cdd:COG1705  132 FIAKIAPAAQKAAKKYGVPASVLIAQAALESGWGKSELdGSPSNNLFGIKAGGSWQGKSVevttteYVNG---KAVKIka 208

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446450984  87 --------------YTSFLNCAKsfaiRFGSAVRKIKDPKQFAQALIESRFNSGKSsngghtgYASELVAMI 144
Cdd:COG1705  209 rfraydsyaesfrdYARLLKNNP----RYAGALANAKDYEAFAKALQKAGYATDPK-------YADKLISII 269
 
Name Accession Description Interval E-value
Glucosaminidase pfam01832
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This family includes ...
 27-61 2.02e-07

Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyse peptidoglycan.


Pssm-ID: 460354 [Multi-domain]  Cd Length: 91  Bit Score: 46.41  E-value: 2.02e-07
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 446450984   27 IANQLEVPVEFILAVAAKESRYGQGRIATEYNNFF 61
Cdd:pfam01832   7 AAKKYGIPASVLLAQAALESGWGTSRLAKESNNLF 41
FlgJ COG1705
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell ...
 16-144 5.35e-07

Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility];


Pssm-ID: 441311 [Multi-domain]  Cd Length: 276  Bit Score: 47.66  E-value: 5.35e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446450984  16 FIQKYKNDCEIIANQLEVPVEFILAVAAKESRYGQGRI-ATEYNNFFSMHGPAPLQLSKV------HPQGshdVWVAT-- 86
Cdd:COG1705  132 FIAKIAPAAQKAAKKYGVPASVLIAQAALESGWGKSELdGSPSNNLFGIKAGGSWQGKSVevttteYVNG---KAVKIka 208

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446450984  87 --------------YTSFLNCAKsfaiRFGSAVRKIKDPKQFAQALIESRFNSGKSsngghtgYASELVAMI 144
Cdd:COG1705  209 rfraydsyaesfrdYARLLKNNP----RYAGALANAKDYEAFAKALQKAGYATDPK-------YADKLISII 269
 
Name Accession Description Interval E-value
Glucosaminidase pfam01832
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This family includes ...
 27-61 2.02e-07

Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyse peptidoglycan.


Pssm-ID: 460354 [Multi-domain]  Cd Length: 91  Bit Score: 46.41  E-value: 2.02e-07
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 446450984   27 IANQLEVPVEFILAVAAKESRYGQGRIATEYNNFF 61
Cdd:pfam01832   7 AAKKYGIPASVLLAQAALESGWGTSRLAKESNNLF 41
FlgJ COG1705
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell ...
 16-144 5.35e-07

Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility];


Pssm-ID: 441311 [Multi-domain]  Cd Length: 276  Bit Score: 47.66  E-value: 5.35e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446450984  16 FIQKYKNDCEIIANQLEVPVEFILAVAAKESRYGQGRI-ATEYNNFFSMHGPAPLQLSKV------HPQGshdVWVAT-- 86
Cdd:COG1705  132 FIAKIAPAAQKAAKKYGVPASVLIAQAALESGWGKSELdGSPSNNLFGIKAGGSWQGKSVevttteYVNG---KAVKIka 208

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446450984  87 --------------YTSFLNCAKsfaiRFGSAVRKIKDPKQFAQALIESRFNSGKSsngghtgYASELVAMI 144
Cdd:COG1705  209 rfraydsyaesfrdYARLLKNNP----RYAGALANAKDYEAFAKALQKAGYATDPK-------YADKLISII 269
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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