NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|446468482|ref|WP_000546336|]
View 

MULTISPECIES: APC family permease [Bacillus]

Protein Classification

APC family permease( domain architecture ID 11425014)

APC (amino acid/polyamine/organocation) family permease is involved in the uptake of a specific amino acid and/or polyamine substrate with the concomitant import of a proton

Gene Ontology:  GO:0016020|GO:0055085|GO:0022857|GO:0015171|GO:0006865
PubMed:  23177982|24038584|25043943|10931886
SCOP:  4006243
TCDB:  2.A.3.1|2.A.3

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-433 4.67e-75

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


:

Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 240.95  E-value: 4.67e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   1 MHHDEKNKIGLTVALSIVVGTIIGSGVFMKPGSVLDYSGSSnmAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLE 80
Cdd:COG0531    5 ESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPA--AILAWLIAGLLALLVALSYAELASAFPRAGGAYTYAR 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  81 EIYGSFWGYLSGWMQTIVY---GPAIIGTLGLYFSSLvinffyLDKVWNLPIAIGTVVFLGVVNSMGTKYGGIVQTITTI 157
Cdd:COG0531   83 RALGPLLGFLAGWALLLSYvlaVAAVAVAFGGYLSSL------FPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTV 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 158 GKMIPIVLIVVLGFWKGNSDIFNVVVPISEN-QSIGMAILATLFAYDGWILLASIGGEMKNPTKLLPKAMTVGILIVTAA 236
Cdd:COG0531  157 LKLLVLLLFIVVGLFAFDPANFTPFLPAGGGlSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVL 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 237 YVLINLALLNVLPAAKIVDlGENATATAAGMLLGEYGGKIISIGIIVSIFGCLNGKILTFPRIPMSMAERGQLPfsKFIA 316
Cdd:COG0531  237 YILVSLALTGVVPYDELAA-SGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLP--KVFA 313

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 317 KESPRFKTPANAITVEI--ILGIILMIISDPNKLSEISVFIIYIFYVMTFIGVFILRKRNKNKERAYSVPlFPIVPIVAI 394
Cdd:COG0531  314 KVHPRFGTPVNAILLTGviALLLLLLGAASFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRVP-LPLIPILGI 392

                        410       420       430
                 ....*....|....*....|....*....|....*....
gi 446468482 395 LGSFFVIgsaIINDPVSCFLSIGIVFTGLPVYWYLNKKK 433
Cdd:COG0531  393 LLCLFLL---YLLGPGALLIGLVLLAIGLLLYLLYRRRH 428
 
Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-433 4.67e-75

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 240.95  E-value: 4.67e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   1 MHHDEKNKIGLTVALSIVVGTIIGSGVFMKPGSVLDYSGSSnmAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLE 80
Cdd:COG0531    5 ESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPA--AILAWLIAGLLALLVALSYAELASAFPRAGGAYTYAR 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  81 EIYGSFWGYLSGWMQTIVY---GPAIIGTLGLYFSSLvinffyLDKVWNLPIAIGTVVFLGVVNSMGTKYGGIVQTITTI 157
Cdd:COG0531   83 RALGPLLGFLAGWALLLSYvlaVAAVAVAFGGYLSSL------FPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTV 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 158 GKMIPIVLIVVLGFWKGNSDIFNVVVPISEN-QSIGMAILATLFAYDGWILLASIGGEMKNPTKLLPKAMTVGILIVTAA 236
Cdd:COG0531  157 LKLLVLLLFIVVGLFAFDPANFTPFLPAGGGlSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVL 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 237 YVLINLALLNVLPAAKIVDlGENATATAAGMLLGEYGGKIISIGIIVSIFGCLNGKILTFPRIPMSMAERGQLPfsKFIA 316
Cdd:COG0531  237 YILVSLALTGVVPYDELAA-SGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLP--KVFA 313

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 317 KESPRFKTPANAITVEI--ILGIILMIISDPNKLSEISVFIIYIFYVMTFIGVFILRKRNKNKERAYSVPlFPIVPIVAI 394
Cdd:COG0531  314 KVHPRFGTPVNAILLTGviALLLLLLGAASFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRVP-LPLIPILGI 392

                        410       420       430
                 ....*....|....*....|....*....|....*....
gi 446468482 395 LGSFFVIgsaIINDPVSCFLSIGIVFTGLPVYWYLNKKK 433
Cdd:COG0531  393 LLCLFLL---YLLGPGALLIGLVLLAIGLLLYLLYRRRH 428
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 6-433 9.89e-59

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 199.97  E-value: 9.89e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482    6 KNKIGLTVALSIVVGTIIGSGVFMKPGSVLDYSGSSNMAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGS 85
Cdd:TIGR00911  41 KKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGP 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   86 FWGYLSGWMQTIVYGPAIIGTLGLYFSSLVINFFYLDKV---WNLP-IAIGTVVFLGVVNSMGTKYGGIVQTITTIGKMI 161
Cdd:TIGR00911 121 LLAFLRLWIELLVIRPGSQAVNALNFAIYILTPVFPDCEvpeWAIRlVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLL 200

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  162 PIVLIVVLGFW---KGNSDIFNVVVPISENQS----IGMAILATLFAYDGWILLASIGGEMKNPTKLLPKAMTVGILIVT 234
Cdd:TIGR00911 201 ALLLIIITGWVqlgKGGVESLNPKNAFEGTETsaggIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVT 280

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  235 AAYVLINLALLNVLPAAKIvdLGENATATAAGMLLGEYGGKIISIGIIVSIFGCLNGKILTFPRIPMSMAERGQLPFSKF 314
Cdd:TIGR00911 281 FIYVLTNIAYFTVLSPEEL--LASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLS 358

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  315 IAkeSPRFKTPANAITVEIILGIILMIISDPNKLSEISVFIIYIFYVMTFIGVFILRKRNKNKERAYSVPLFpiVPIVAI 394
Cdd:TIGR00911 359 MI--HVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYKRPEMNRPIKVPLF--FPVFFL 434

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|...
gi 446468482  395 LGSFFVIGSAIINDPVSCFLSIGIVFTGLPVY----WYLNKKK 433
Cdd:TIGR00911 435 LSCLFLIILSLYSPPVGCGVGFIIMLTGVPVYffgvWWQNKPK 477
frlA PRK11357
amino acid permease;
6-432 2.82e-41

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 151.93  E-value: 2.82e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   6 KNKIGLTVALSIVVGTIIGSGVFMKPGSVLDYSGSSNMAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGS 85
Cdd:PRK11357   7 QRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSR 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  86 FWGYLSGWMQTIVYGPAIIGTLGLYFSSLVINFFYLDKVWNLPIAIGTVVFLGVVNSMGTKYGGIVQTITTIGKMIPIVL 165
Cdd:PRK11357  87 PLAFLSGWASFWANDAPSLSIMALAIVSNLGFLTPIDPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTI 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 166 IVVLGFWKGNSDIFNVVVPISENQSIG-MAIL----ATLFAYDGWILLASIGGEMKNPTKLLPKAMTVGILIVTAAYVLI 240
Cdd:PRK11357 167 VIGLGIFWFKAENFAAPTTTAIGATGSfMALLagisATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLL 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 241 NLALLNVLPAAKIVDlGENATATAAGML--LGEYGGKIISIGIIVSIFGCLNGKILTFPRIPMSMAERGQlpFSKFIAKE 318
Cdd:PRK11357 247 ALVISGLMPFDKLAN-SETPISDALTWIpaLGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNL--FFKCFGHV 323

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 319 SPRFKTPANAITVEIILGIILMIISDPNKLSEISVFIIYIFYVMTFIGVFILRKRNkNKERAYSVPLFPIVPIVAILGSF 398
Cdd:PRK11357 324 HPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRD-DYKPLWRTPAFGLMTTLAIASSL 402

                        410       420       430
                 ....*....|....*....|....*....|....*
gi 446468482 399 FVIGSAIINDPVSCFL-SIGIVFTGLPVYWYLNKK 432
Cdd:PRK11357 403 ILVASTFVWAPIPGLIcAVIVIATGLPAYAFWAKR 437
AA_permease_2 pfam13520
Amino acid permease;
9-406 2.23e-37

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 140.91  E-value: 2.23e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482    9 IGLTVALSIVVGTIIGSGVFMKPGSvldYSGSSNMAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGSFWG 88
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAPLV---ASGGPALIVWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVA 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   89 YLSGWMQTIVY---GPAIIGTLGLYFSSLVINFFYLDKVWNLPIAIGTVVFLGVVNSMGTKYGGIVQTITTIGKM-IPIV 164
Cdd:pfam13520  78 FLAGWSNWFAYvlgLASSASVAASYLLSALGPDLVPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLlLPLI 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  165 LIVVLGFWKGNSDIFNVVVPI------SENQSIGMAILATLFAYDGWILLASIGGEMKNPTklLPKAMTVGILIVTAAYV 238
Cdd:pfam13520 158 LIIILGLVTADGGGFNLLSGEwhtffpDGWPGVFAGFLGVLWSFTGFESAANVSEEVKKRN--VPKAIFIGVIIVGVLYI 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  239 LINLALLNVLPAAKIVDLGE--NATATAAGMLLGEYGGKIISIGIIVSIFGCLNGKILTFPRIPMSMAERGQLPFSKFIA 316
Cdd:pfam13520 236 LVNIAFFGVVPDDEIALSSGlgQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPFSRFFA 315

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  317 KESPrFKTPANAITV-----EIILGIILMIISDPNKLSEISVFIIYIFYVMTFIGVFILRKRNKNKERAysvPLFPIVPI 391
Cdd:pfam13520 316 KVNK-FGSPIRAIILtailsLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRI---PGRWPVAI 391

                         410
                  ....*....|....*
gi 446468482  392 VAILGSFFVIGSAII 406
Cdd:pfam13520 392 FGILFSLFLIVALFF 406
 
Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-433 4.67e-75

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 240.95  E-value: 4.67e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   1 MHHDEKNKIGLTVALSIVVGTIIGSGVFMKPGSVLDYSGSSnmAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLE 80
Cdd:COG0531    5 ESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPA--AILAWLIAGLLALLVALSYAELASAFPRAGGAYTYAR 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  81 EIYGSFWGYLSGWMQTIVY---GPAIIGTLGLYFSSLvinffyLDKVWNLPIAIGTVVFLGVVNSMGTKYGGIVQTITTI 157
Cdd:COG0531   83 RALGPLLGFLAGWALLLSYvlaVAAVAVAFGGYLSSL------FPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTV 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 158 GKMIPIVLIVVLGFWKGNSDIFNVVVPISEN-QSIGMAILATLFAYDGWILLASIGGEMKNPTKLLPKAMTVGILIVTAA 236
Cdd:COG0531  157 LKLLVLLLFIVVGLFAFDPANFTPFLPAGGGlSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVL 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 237 YVLINLALLNVLPAAKIVDlGENATATAAGMLLGEYGGKIISIGIIVSIFGCLNGKILTFPRIPMSMAERGQLPfsKFIA 316
Cdd:COG0531  237 YILVSLALTGVVPYDELAA-SGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLP--KVFA 313

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 317 KESPRFKTPANAITVEI--ILGIILMIISDPNKLSEISVFIIYIFYVMTFIGVFILRKRNKNKERAYSVPlFPIVPIVAI 394
Cdd:COG0531  314 KVHPRFGTPVNAILLTGviALLLLLLGAASFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRVP-LPLIPILGI 392

                        410       420       430
                 ....*....|....*....|....*....|....*....
gi 446468482 395 LGSFFVIgsaIINDPVSCFLSIGIVFTGLPVYWYLNKKK 433
Cdd:COG0531  393 LLCLFLL---YLLGPGALLIGLVLLAIGLLLYLLYRRRH 428
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 6-433 9.89e-59

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 199.97  E-value: 9.89e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482    6 KNKIGLTVALSIVVGTIIGSGVFMKPGSVLDYSGSSNMAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGS 85
Cdd:TIGR00911  41 KKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGP 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   86 FWGYLSGWMQTIVYGPAIIGTLGLYFSSLVINFFYLDKV---WNLP-IAIGTVVFLGVVNSMGTKYGGIVQTITTIGKMI 161
Cdd:TIGR00911 121 LLAFLRLWIELLVIRPGSQAVNALNFAIYILTPVFPDCEvpeWAIRlVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLL 200

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  162 PIVLIVVLGFW---KGNSDIFNVVVPISENQS----IGMAILATLFAYDGWILLASIGGEMKNPTKLLPKAMTVGILIVT 234
Cdd:TIGR00911 201 ALLLIIITGWVqlgKGGVESLNPKNAFEGTETsaggIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVT 280

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  235 AAYVLINLALLNVLPAAKIvdLGENATATAAGMLLGEYGGKIISIGIIVSIFGCLNGKILTFPRIPMSMAERGQLPFSKF 314
Cdd:TIGR00911 281 FIYVLTNIAYFTVLSPEEL--LASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLS 358

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  315 IAkeSPRFKTPANAITVEIILGIILMIISDPNKLSEISVFIIYIFYVMTFIGVFILRKRNKNKERAYSVPLFpiVPIVAI 394
Cdd:TIGR00911 359 MI--HVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYKRPEMNRPIKVPLF--FPVFFL 434

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|...
gi 446468482  395 LGSFFVIGSAIINDPVSCFLSIGIVFTGLPVY----WYLNKKK 433
Cdd:TIGR00911 435 LSCLFLIILSLYSPPVGCGVGFIIMLTGVPVYffgvWWQNKPK 477
frlA PRK11357
amino acid permease;
6-432 2.82e-41

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 151.93  E-value: 2.82e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   6 KNKIGLTVALSIVVGTIIGSGVFMKPGSVLDYSGSSNMAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGS 85
Cdd:PRK11357   7 QRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSR 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  86 FWGYLSGWMQTIVYGPAIIGTLGLYFSSLVINFFYLDKVWNLPIAIGTVVFLGVVNSMGTKYGGIVQTITTIGKMIPIVL 165
Cdd:PRK11357  87 PLAFLSGWASFWANDAPSLSIMALAIVSNLGFLTPIDPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTI 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 166 IVVLGFWKGNSDIFNVVVPISENQSIG-MAIL----ATLFAYDGWILLASIGGEMKNPTKLLPKAMTVGILIVTAAYVLI 240
Cdd:PRK11357 167 VIGLGIFWFKAENFAAPTTTAIGATGSfMALLagisATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLL 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 241 NLALLNVLPAAKIVDlGENATATAAGML--LGEYGGKIISIGIIVSIFGCLNGKILTFPRIPMSMAERGQlpFSKFIAKE 318
Cdd:PRK11357 247 ALVISGLMPFDKLAN-SETPISDALTWIpaLGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNL--FFKCFGHV 323

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 319 SPRFKTPANAITVEIILGIILMIISDPNKLSEISVFIIYIFYVMTFIGVFILRKRNkNKERAYSVPLFPIVPIVAILGSF 398
Cdd:PRK11357 324 HPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRD-DYKPLWRTPAFGLMTTLAIASSL 402

                        410       420       430
                 ....*....|....*....|....*....|....*
gi 446468482 399 FVIGSAIINDPVSCFL-SIGIVFTGLPVYWYLNKK 432
Cdd:PRK11357 403 ILVASTFVWAPIPGLIcAVIVIATGLPAYAFWAKR 437
AA_permease_2 pfam13520
Amino acid permease;
9-406 2.23e-37

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 140.91  E-value: 2.23e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482    9 IGLTVALSIVVGTIIGSGVFMKPGSvldYSGSSNMAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGSFWG 88
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAPLV---ASGGPALIVWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVA 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   89 YLSGWMQTIVY---GPAIIGTLGLYFSSLVINFFYLDKVWNLPIAIGTVVFLGVVNSMGTKYGGIVQTITTIGKM-IPIV 164
Cdd:pfam13520  78 FLAGWSNWFAYvlgLASSASVAASYLLSALGPDLVPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLlLPLI 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  165 LIVVLGFWKGNSDIFNVVVPI------SENQSIGMAILATLFAYDGWILLASIGGEMKNPTklLPKAMTVGILIVTAAYV 238
Cdd:pfam13520 158 LIIILGLVTADGGGFNLLSGEwhtffpDGWPGVFAGFLGVLWSFTGFESAANVSEEVKKRN--VPKAIFIGVIIVGVLYI 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  239 LINLALLNVLPAAKIVDLGE--NATATAAGMLLGEYGGKIISIGIIVSIFGCLNGKILTFPRIPMSMAERGQLPFSKFIA 316
Cdd:pfam13520 236 LVNIAFFGVVPDDEIALSSGlgQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPFSRFFA 315

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  317 KESPrFKTPANAITV-----EIILGIILMIISDPNKLSEISVFIIYIFYVMTFIGVFILRKRNKNKERAysvPLFPIVPI 391
Cdd:pfam13520 316 KVNK-FGSPIRAIILtailsLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRI---PGRWPVAI 391

                         410
                  ....*....|....*
gi 446468482  392 VAILGSFFVIGSAII 406
Cdd:pfam13520 392 FGILFSLFLIVALFF 406
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 15-371 2.24e-24

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 105.67  E-value: 2.24e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   15 LSIVVGTIIGSGVFMKPGSVL-DYSGSSnmAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGSFWGYLSGW 93
Cdd:TIGR00906  36 MALGIGSTIGAGIYVLTGEVArNDSGPA--IVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVTVGELWAFITGW 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   94 ---MQTIVYGPAIIGTLGLYFSSLV---INFFYLDKVWNL---------PIAIGTVVFLGVVNSMGTKYGGIVQTITTIG 158
Cdd:TIGR00906 114 nliLEYVIGTAAVARSWSAYFDELLnkqIGQFRRTYFKLNydglaeypdFFAVCLILLLAVLLSFGVKESAWVNKIFTAI 193

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  159 KMIPIVLIVVLGFWKGNSDIFNvvvpISENQSIG----------MAILATLF-AYDGWILLASIGGEMKNPTKLLPKAMT 227
Cdd:TIGR00906 194 NILVLLFVIIAGFTKADVANWS----ITEEKGAGgfmpygftgvLSGAATCFfAFIGFDAIATTGEEVKNPQRAIPIGIV 269

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  228 VGILIVTAAYVLINLALLNVLP------------AAKIVDLGENATATAAGMLLGeyggkiisigiivsIFGCLNGKILT 295
Cdd:TIGR00906 270 TSLLVCFVAYFLMSAALTLMMPyylldpdapfpvAFEYVGWDPAKYIVAVGALCG--------------MSTSLLGGMFP 335

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 446468482  296 FPRIPMSMAERGQLPfsKFIAKESPRFKTPANAITVEIILGIILMIISDPNKLSEISVFIIYIFYVMTFIGVFILR 371
Cdd:TIGR00906 336 LPRVIYAMARDGLLF--KWLAQINSKTKTPINATVVSGAIAALMAFLFDLKALVDLLSIGTLLAYSLVAACVLILR 409
AA_permease pfam00324
Amino acid permease;
14-406 8.68e-21

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 94.31  E-value: 8.68e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   14 ALSIVVGTIIGSGVFMKPGSVLdYSGSSNMAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGSFWGYLSGW 93
Cdd:pfam00324   2 VQMIALGGVIGTGLFVGSGSVL-GQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   94 MQTIVYgpaiIGTLGLYFSSLVINFFYLDKVWNLPIAIGT----VVFLGVVNSMGTKYGGIVQTITTIGKMIPIVLIVVL 169
Cdd:pfam00324  81 NYWLSW----ITVLALELTAASILIQFWELVPDIPYLWVWgavfLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIV 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  170 G----------------FWKGNSDIFNVVVPISENQSIGMAILAtlFAYDGWILLASIGGEMKNPTKLLPKAMTVGILIV 233
Cdd:pfam00324 157 GiillsggnpndgaifrYLGDNGGKNNFPPGFGKGFISVFVIAF--FAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRI 234

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  234 TAAYVLINLALLNVLPAAKIVDLGENATATAAGMLLGEYGGKIISIGIIVSI-----FGCLNGKILTFPRIPMSMAERGQ 308
Cdd:pfam00324 235 TIFYILSLLAIGLLVPWNDPGLLNDSASAASPFVIFFKFLGISGLAPLINAViltaaLSAANSSLYSGSRMLYSLARDGL 314

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  309 LPfskFIAKESPRFKTPANAITVEIILGIILMIISDPNKLSEISVFI----IYIFYVMTFIGVFILRKRNKNKERAYSVP 384
Cdd:pfam00324 315 AP---KFLKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLaisgLSGLIVWGLISLSHLRFRKAFKYQGRSID 391

                         410       420
                  ....*....|....*....|..
gi 446468482  385 LFPIVPIVAILGSFFVIGSAII 406
Cdd:pfam00324 392 ELPFKAPLGPLGVILGLAAIII 413
PRK10644 PRK10644
arginine/agmatine antiporter;
5-397 4.21e-19

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 89.08  E-value: 4.21e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   5 EKNKIGLTVALSIVVGTIIGSGVFMKPGSVLDYSGssnMAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYG 84
Cdd:PRK10644   6 DAHKVGLIPVTLMVAGNIMGSGVFLLPANLASTGG---IAIYGWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYARRCFG 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  85 SFWGY-------LSGWMQTIVYGPAIIGTLGLYFSSLVinffylDKVWNLPIAIGTVVFLGVVNSMGTKYGGIVQTITTI 157
Cdd:PRK10644  83 PFLGYqtnvlywLACWIGNIAMVVIGVGYLSYFFPILK------DPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATV 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 158 GKMIPIVLIVVLGFWKGNSDIFNVVVPISENQSIG--MAILA-TLFAYDGWILLASIGGEMKNPTKLLPKAMTVGILIVT 234
Cdd:PRK10644 157 LALIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGaiQSTLNvTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAA 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 235 AAYVLINLALLNVLPAAKIVdLGENATATAAGMLLGEYGGKIISIGIIVSIFGCLNGKILTFPRIPMSMAERGQLP--FS 312
Cdd:PRK10644 237 VCYVLSSTAIMGMIPNAALR-VSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPpiFA 315

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 313 KFIAKESPrfktPANAITVEIILGIILMIISDPN------KLSEISVFIIYIFYVMTFIGVFILRKRNKNKERAYSVPLF 386
Cdd:PRK10644 316 RVNKAGTP----VAGLLIVGVLMTIFQLSSISPNaskefgLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVT 391

                        410
                 ....*....|....
gi 446468482 387 PIV---PIVAILGS 397
Cdd:PRK10644 392 LIAfvyCIWAVVGS 405
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
17-433 1.82e-11

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 65.53  E-value: 1.82e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  17 IVVGTIIGSGVFMKPGSVLDYSGSSnmAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGSFWGYLSGWM-- 94
Cdd:COG1113   25 IALGGAIGTGLFLGSGKAIALAGPA--VLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYAREYLGPWAGFVTGWLyw 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  95 -QTIVYGPAIIGTLGLYfsslvINFFYLDkvwnLP---IAIGTVVFLGVVNSMGTKYGGIVQTITTIGKMIPIVLIVVLG 170
Cdd:COG1113  103 fFWVLVGMAEATAVGIY-----LQFWFPD----VPqwvWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIVAFIVVG 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 171 FWkgnSDIFNVVVPISENQSIG-----------------MAILATLFAYDGwILLASI-GGEMKNPTKLLPKAMTVGILI 232
Cdd:COG1113  174 LL---LIFFGFGLPGGPPAGLSnlwdhggffpngiggvlAALQIVVFAFGG-IELVGIaAAEAKDPEKTIPKAINSVIWR 249

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 233 VTAAYVLINLALLNVLPAAKIVD-----------LGENATA--------TAAgmllgeyggkiisigiivsiFGCLNGKI 293
Cdd:COG1113  250 ILLFYVGSLFVILALVPWNQIGAggspfvtvfslLGIPAAAgimnfvvlTAA--------------------LSSLNSGL 309

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 294 LTFPRIPMSMAERGQLPfsKFIAKESPRfKTPANAITVEIILGIILMIIS--DPNK----LSEISVFIIYIFYVMTFIGV 367
Cdd:COG1113  310 YSTSRMLYSLAERGDAP--KFFGKLSKR-GVPVRAILLSAVVLLIGVVLNylLPEKaftfLLSISGFGALFVWLMILVSQ 386

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 368 FILRKRNKNKERAYS---VPLFPIVPIVAILGSFFVIGS-AIINDPVSCFLSIGIVFTGLPVYWYLNKKK 433
Cdd:COG1113  387 LKFRRRLPREGAAALkfkMPGFPYTSYLTLAFLAAVLVLmAFDPDTRIALIVGPVWLALLVVGYFLVRRR 456
PRK15049 PRK15049
L-asparagine permease;
17-319 1.12e-08

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 56.94  E-value: 1.12e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  17 IVVGTIIGSGVFMKPGSVLDYSGSSnmAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGSFWGYLSGWMQT 96
Cdd:PRK15049  38 IAIGGAIGTGLFLGAGARLQMAGPA--LALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYF 115

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  97 IVYgpAIIGTLGLYFSSLVINFF-YLDKVWNLPIAIGTVVFLGVVNSMGTKYGGIVQTITTIGKMIPIVLIVVLGF---- 171
Cdd:PRK15049 116 INW--AMTGIVDITAVALYMHYWgAFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLVVGTvflg 193

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 172 ----WKGNSDIFNVVVPISENQSIGMA-----ILATLFAYDGWILLASIGGEMKNPTKLLPKAMTVGILIVTAAYVLINL 242
Cdd:PRK15049 194 sgqpLDGNTTGFHLITDNGGFFPHGLLpalvlIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGLFYVGSVV 273

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446468482 243 ALLNVLPAAKiVDLGENATATAAGMLLGEYGGKIISIGIIVSIFGCLNGKILTFPRIPMSMAERGQLPfsKFIAKES 319
Cdd:PRK15049 274 LLVMLLPWSA-YQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAP--SFMAKMS 347
PRK10238 PRK10238
aromatic amino acid transporter AroP;
17-253 4.97e-08

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 54.96  E-value: 4.97e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  17 IVVGTIIGSGVFMKPGSVLDYSGSSnmAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGSFWGYLSGWMQT 96
Cdd:PRK10238  22 IALGGAIGTGLFLGSASVIQSAGPG--IILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYW 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  97 IVYgpAIIGTLGLYFSSLVINFFYLDkvwnLPIAIGTVVFLGVVNSM---GTKYGGIVQTITTIGKMIPIVLIVVLGFW- 172
Cdd:PRK10238 100 VLY--VLVAMAELTAVGKYIQFWYPE----IPTWVSAAVFFVVINAInltNVKVFGEMEFWFAIIKVIAVVAMIIFGGWl 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 173 --KGNSDIFNVVVPISEN--------QSIGMAILATLFAYDGWILLASIGGEMKNPTKLLPKAMTVGILIVTAAYVLINL 242
Cdd:PRK10238 174 lfSGNGGPQATVSNLWDQggflphgfTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLA 253

                        250
                 ....*....|.
gi 446468482 243 ALLNVLPAAKI 253
Cdd:PRK10238 254 VLLSLMPWTRV 264
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
 38-329 1.67e-07

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 53.21  E-value: 1.67e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   38 SGSSNMAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGSFWGYLSGWMQ---TIVYGPAIIGTLGLYFSSL 114
Cdd:TIGR00907  43 SGGAMSIVWGWIIAGAGSICIALSLAELSSAYPTSGGQYFWSAKLAPPRQMPFASWMTgwfNLAGQVAGTASTDLSVAQL 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  115 VINFF--------YLDKVWN-LPIAIGTVVFLGVVNSMGTKYGGIVQ----TITTIGKMIPIVLIVVLGFWKGNSDIFNV 181
Cdd:TIGR00907 123 ILGIVslttpgreYIPTRWHiFGIMIGIHLIHALINSLPTKWLPRITssaaYWSLLGFLTICITLLACKSPKFNDGKFVF 202

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  182 VVPISEN---QSIGMAILATL----FAYDGWILLASIGGEMKNPTKLLPKAM--TVGILIVTAAYVLINL--------AL 244
Cdd:TIGR00907 203 TNFNNSTggwKPGGFAFLLGLlnpaWSMTGYDGTAHMAEEIENPEVVGPRAIigAVAIGIVTGFCFNIVLffsmgdidSL 282

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  245 LNVLPAAKIVDLGENATATAAGMLLgeyggkiISIGIIVSIFGCLNGKILTFPRIPMSMAERGQLPFSKFIAKESPRFKT 324
Cdd:TIGR00907 283 ISSTTGQPIAQIFYNALGNKAGAIF-------LLCLILVTSFFCAITCMTANSRMIYAFSRDGGLPFSPLWSRVNPRTQV 355


                  ....*
gi 446468482  325 PANAI 329
Cdd:TIGR00907 356 PLNAV 360
cadB PRK10435
cadaverine/lysine antiporter;
8-272 1.88e-07

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 53.22  E-value: 1.88e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   8 KIGLTVALSIVVGTIIGSGVFMKPGSvLDYSGSsnMAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGSFw 87
Cdd:PRK10435   6 KIGLFACTGVVAGNMMGSGIALLPAN-LASIGS--IAIWGWIISIIGAMSLAYVYARLATKNPQQGGPIAYAGEISPAF- 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  88 GYLSGwmqTIVYGPAIIGTL--GLYFSSLVINFFyldKVWNLPI-----AIGTVVFLGVVNSMGtkyGGIVQTITTIG-- 158
Cdd:PRK10435  82 GFQTG---VLYYHANWIGNLaiGITAVSYLSTFF---PVLNDPIpagiaCIAIVWVFTFVNMLG---GTWVSRLTTIGlv 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 159 -KMIPIVLIVVLGFWKGNSDIFNV---VVPISENQSIGMAILATLFAYDGWILLASIGGEMKNPTKLLPKAMTVGILIVT 234
Cdd:PRK10435 153 lVLIPVVGTAIVGWHWFDAATYAAnwnTSDTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAG 232

                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 446468482 235 AAYVLINLALLNVLPAAKIVDLGEnATATAAGMLLGEY 272
Cdd:PRK10435 233 IIYIAATQVISGMFPASVMAASGA-PFAISASTILGNW 269
potE PRK10655
putrescine transporter; Provisional
 4-404 1.78e-06

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 50.03  E-value: 1.78e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   4 DEKNKIGLtVALSIVVG-TIIGSGVFMKPgSVLDYSGSsnMAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEI 82
Cdd:PRK10655   3 AKSNKMGV-VQLTILTAvNMMGSGIIMLP-TKLAQVGT--ISILSWLVTAVGSMALAYAFAKCGMFSRKSGGMGGYAEYA 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  83 YGSFWGYLSGWmqtivygpaiigtlgLYFSSLVI--------------NFFYLDkVWNLPIAIGTVVFL---GVVNSMGT 145
Cdd:PRK10655  79 FGKSGNFMANY---------------TYGVSLLIanvaiaisavgygtELFGAT-LSPVQICLATIGVLwlcTVANFGGA 142

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 146 KYGGIVQTITTIGKMIPIVLIVVLGFWKGNSDIFNVV-----VPISEnqSIGMAILATLFAYDGWILLASIGGEMKNPTK 220
Cdd:PRK10655 143 RITGQISSVTVWGVIIPVVGLSIIGWFWFSPSLYVAAwnphhLPFFS--AVGSSIAMTLWAFLGLESACANSDAVENPER 220

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 221 LLPKAMTVGILIVTAAYVLINlallNVLpaAKIVDLGENATATA------AGMlLGEYGGKIISIGIIVSIFGCLNGKIL 294
Cdd:PRK10655 221 NVPIAVLGGTLGAAVIYIVST----NVI--AGIVPNMELANSTApfglafAQM-FNPTVGKIVMALMVMSCCGSLLGWQF 293

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 295 TFPRIPMSMAERGQLP--FSKFIAKESPrfktPANAITVEIILGIILMIISDP------NKLSEISVFIIYIFYVMTFIG 366
Cdd:PRK10655 294 TIAQVFKSSADEGYFPkiFSRVTKVDAP----VQGMLIIVVIQSLLSLMTISPslnsqfNVLVNLAVVTNIIPYILSMAA 369

                        410       420       430
                 ....*....|....*....|....*....|....*...
gi 446468482 367 VFILRKRNKNKERAYSVPLFpiVPIVAILGSFFVIGSA 404
Cdd:PRK10655 370 LVIIQKVANVPPSKAKVANF--IAFVGALYSFYALYSS 405
PRK10249 PRK10249
phenylalanine transporter; Provisional
 17-253 2.85e-05

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 46.13  E-value: 2.85e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  17 IVVGTIIGSGVFMKPGSVLDYSGSSnmAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGSFWGYLSG---W 93
Cdd:PRK10249  31 IALGGAIGTGLFLGIGPAIQMAGPA--VLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFLSGwnyW 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  94 MQTIVYGPAIIGTLGLYFSslvinfFYLDKVWNLPIAIGTVVFLGVVNSMGTKYGGIVQTITTIGKMIPIVLIVVLGFW- 172
Cdd:PRK10249 109 VMFVLVGMAELTAAGIYMQ------YWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWl 182

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 173 --------KGNSD---IFNVVVPISENQSIgMAILATLFAYDGWILLASIGGEMKNPTKLLPKAMTVGILIVTAAYVLIN 241
Cdd:PRK10249 183 lfsghggeKASIDnlwRYGGFFATGWNGLI-LSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYIGSL 261

                        250
                 ....*....|..
gi 446468482 242 LALLNVLPAAKI 253
Cdd:PRK10249 262 VVLLALYPWVEV 273
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 17-240 1.02e-04

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 44.58  E-value: 1.02e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   17 IVVGTIIGSGVFMKPGSVLDYSGSSNMaILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGS-FWGYLSGWMQ 95
Cdd:TIGR00913  12 IALGGTIGTGLLVGSGTALATGGPAGL-LIGYAIMGSIIYCVMQSLGEMATFYPVVSGSFATYASRFVDpAFGFAVGWNY 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   96 TIVYgpAIIGTLGLYFSSLVINFfYLDKVwNLPIAIGTV-VFLGVVNSMGTKYGGIVQTITTIGKMIPIVLIVVLGF--- 171
Cdd:TIGR00913  91 WLQW--LIVLPLELVTASMTIQY-WTDKV-NPAVWIAIFyVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFIILSIiln 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  172 WKGNSDI-------------FNVVVPISENQSIGMAILATLFAYDGWILLASIGGEMKNPTKLLPKAMTVGILIVTAAYV 238
Cdd:TIGR00913 167 CGGGPNHgyigfrywhdpgaFAGGTIGGRFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWRILVFYI 246


                  ..
gi 446468482  239 LI 240
Cdd:TIGR00913 247 LT 248
PRK11387 PRK11387
S-methylmethionine permease;
19-395 2.57e-04

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 43.30  E-value: 2.57e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  19 VGTIIGSGVFMKPGSVLDYSGSSNmAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGSFWGYLSGWMQTIV 98
Cdd:PRK11387  26 LGGVIGTGLFFNTGYIISTTGAAG-TLLAYLIGALVVYLVMQCLGELSVAMPETGAFHVYAARYLGPATGYTVAWLYWLT 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  99 YGPAiigtLGlyfSSLVINFFYLdKVW--NLPIAIGTVVFLGVV---NSMGTKYGGIVQTITTIGKMIPIVLIVVLGfwk 173
Cdd:PRK11387 105 WTVA----LG---SSLTAAGFCM-QYWfpQVPVWPWCLLFCALIfglNVVSTRFFAEGEFWFSLIKVVTILAFIVLG--- 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 174 gNSDIFNVVvPISENQS-------------------IGMAILATLFAYDGWILLASIGGEMKNPTKLLPKAmtvgilIVT 234
Cdd:PRK11387 174 -GAAIFGFI-PMQDGSPapglrnltaegwfphgglpILMTMVAVNFAFSGTELIGIAAGETENPAKVIPVA------IRT 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 235 AAYVLINLALLNVLPAAKIVDLGENATATAAGMLLGE-----YGGKIISIGIIVSIFGCLNGKILTFPRIPMSMAERGQL 309
Cdd:PRK11387 246 TIARLVIFFVGTVLVLAALIPMQQAGVEKSPFVLVFEkvgipYAADIFNFVILTAILSAANSGLYASGRMLWSLSNEGTL 325

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 310 PfsKFIAKESPRfKTPANAITVEIILGIILMIIS--DPNK----LSEISVFIIYIFYVMTFIGVFILRKRNKNKERA--- 380
Cdd:PRK11387 326 P--ACFARLTKR-GIPLTALSVSMLGGLLALFSSvvAPDTvfvaLSAISGFAVVAVWLSICASHFMFRRRHLRDGKAlse 402

                        410
                 ....*....|....*..
gi 446468482 381 --YSVPLFPIVPIVAIL 395
Cdd:PRK11387 403 laYRAPWYPLTPILGFV 419
proY PRK10580
putative proline-specific permease; Provisional
 17-249 4.29e-04

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 42.50  E-value: 4.29e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  17 IVVGTIIGSGVFMKPGSVLDYSGSSnmAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGSFWGYLSGW--- 93
Cdd:PRK10580  19 MALGSAIGTGLFYGSADAIKMAGPS--VLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWtyc 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  94 MQTIVYGPAIIGTLGLYFSslvinfFYLDKVWNLPIAIGTVVFLGVVNSMGTKYGGIVQTITTIGKMIPIVLIVVLGFWK 173
Cdd:PRK10580  97 FEILIVAIADVTAFGIYMG------VWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGIGI 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 174 GNSDIFNVVVPIS-----------ENQSIGM--AILATLFAYDGWILLASIGGEMKNPTKLLPKAMTVGILIVTAAYVLI 240
Cdd:PRK10580 171 IIWGIGNGGQPTGihnlwsnggffSNGWLGMvmSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVFYVGT 250


                 ....*....
gi 446468482 241 NLALLNVLP 249
Cdd:PRK10580 251 LFVIMSIYP 259
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
17-433 1.55e-03

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 40.54  E-value: 1.55e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  17 IVVGTIIGSGVFMKPGSVLDYSGSSNmAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGSFWGYLSGWMQT 96
Cdd:COG0833   22 IALGGVIGTGLFLASGYTISQAGPGG-ALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYATRFIDPAFGFAVGWNYW 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  97 ivYGPAIigTLGLYF--SSLVINFFYLDkvwnLPIAIGTVVFLGVV---NSMGTK-YG-------GIvqTITTIGKMIPI 163
Cdd:COG0833  101 --LNWAI--TVAAELtaAGIIMQYWFPD----VPVWIWSLLFLALIfllNALSVKaFGesefwfsLI--KVITVIAFIIV 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 164 VLIVVLGFWKGNSDIFnvvvpisENQSIG--------MAILATL----FAYDGWILLASIGGEMKNPTKLLPKAM---TV 228
Cdd:COG0833  171 GLLMIFGIIGGHAPGF-------SNFTTGdgpfpggfLAILGVMmivgFSFQGTELIGIAAGESENPEKTIPKAIrqvFW 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 229 GILIVtaaYVLINLALLNVLPAAK-------IVDLGENA-TATAAGMllgeyggkiisigiivsifgcLNGKILT----- 295
Cdd:COG0833  244 RILLF---YILAIFVIAALIPYTDagvaespFTLVFERAgIPYAADI---------------------MNAVILTavlsa 299

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 296 -------FPRIPMSMAERGQLPfsKFIAKESPRfKTPANAITVEIILGIILMIIS--DPNKL-------SEISVFIIYIF 359
Cdd:COG0833  300 gnsglyaSTRMLWSLAKEGMAP--KIFAKLNKR-GVPLNALLATMAVGLLALLSSffGAGTVylwllsiSGLTGFIAWLG 376

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 360 YVmtfIGVFILRKR-----NKNKERAYSVPLFPIVPIVAILGSFFVIGSAIINDPVSCFLSIGIVFTGLP-VYWYLNKKK 433
Cdd:COG0833  377 IA---ISHYRFRRAyvaqgGDLEDLKYKAPLFPFGPIFAFILCLIVIIGQAFDPEQRIALYIGIPFFLACyLGYKLKKKT 453
Trp_Tyr_perm pfam03222
Tryptophan/tyrosine permease family;
16-249 5.76e-03

Tryptophan/tyrosine permease family;


Pssm-ID: 367404  Cd Length: 393  Bit Score: 38.81  E-value: 5.76e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   16 SIVVGTIIGSGVFMKP--GSVLDYSGSSNMAILAWVIggllTLASGLTVAEIGAQIPKNGGLYTYLEEIYGSFWGYLSGw 93
Cdd:pfam03222  10 LIIAGTAIGAGMLALPvaTAGAGFIPSLLLLILSWFL----MLASGLLLLEVYLWYPEGASFNTLAKDLLGKKGNIIAG- 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482   94 mqtIVYGPAIIGTLGLYFS---SLVINFF--YLDKVWNLPIA-IGTVVFLGVVNSMGTKYGGIVQTITTIGKMIPIVLIV 167
Cdd:pfam03222  85 ---LVYAFLLYILTYAYISgggSILSRVIpeMFGIPWSARAApLIFTLLFGPFVWAGTKAVDRINRVLIFGKIIAFALVF 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  168 VLGFWKGNSDI-FNVVVPISENQSIGMA-ILATLFAYDGWIllASIGGEMKNPTKLLPKAMTVGILIVTAAYVLINLALL 245
Cdd:pfam03222 162 SGLLPKIKGDLlLDALDTSYWPYILMALpVFFTSFGFHGNV--PSLYKYYGGNVKKVRKAILIGTAIPLVLYILWQLATL 239


                  ....
gi 446468482  246 NVLP 249
Cdd:pfam03222 240 GNLP 243
PRK10746 PRK10746
putative transport protein YifK; Provisional
 17-242 6.60e-03

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 38.65  E-value: 6.60e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  17 IVVGTIIGSGVFMKPGSVLDYSGSSnmAILAWVIGGLLTLASGLTVAEIGAQIPKNGGLYTYLEEIYGSFWGYLSGW--- 93
Cdd:PRK10746  20 IALGGTIGVGLFMGAASTLKWAGPS--VLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWsyw 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482  94 MQTIVYGPAIIGTLGLYfsslvINFFYLDKVWNLPiAIGTVVFLGVVNSMGTKYGGIVQ------TITTIGKMIPIVLIV 167
Cdd:PRK10746  98 FMWMAVGISEITAIGVY-----VQFWFPEMAQWIP-ALIAVALVALANLAAVRLYGEIEfwfamiKVTTIIVMIVIGLGV 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446468482 168 VLgFWKGNsdifnvvvpisENQSIGMAILAT------------LFA-------YDGWILLASIGGEMKNPTKLLPKAMT- 227
Cdd:PRK10746 172 IF-FGFGN-----------GGQSIGFSNLTEhggffaggwkgfLTAlcivvasYQGVELIGITAGEAKNPQVTLRSAVGk 239

                        250
                 ....*....|....*....
gi 446468482 228 ----VGILIVTAAYVLINL 242
Cdd:PRK10746 240 vlwrILIFYVGAIFVIVTI 258
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH