|
Name |
Accession |
Description |
Interval |
E-value |
| HI0933_like |
pfam03486 |
HI0933-like protein; |
3-413 |
0e+00 |
|
HI0933-like protein;
Pssm-ID: 427330 [Multi-domain] Cd Length: 406 Bit Score: 558.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 3 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTN-RLPLDEIVKHIPGNGRFLYSAFSIFNNE 81
Cdd:pfam03486 1 FDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLGRKILISGGGRCNVTNlSEEPDNFLSRYPGNPKFLKSALSRFTPW 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 82 DIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQtGEVLETNHVVI 161
Cdd:pfam03486 81 DFIAFFESLGVPLKEEDHGRLFPDSDKASDIVDALLNELKELGVKIRLRTRVLSVEKDDDGRFRVKTG-GEELEADSLVL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 162 AVGGKSVPQTGSTGDGYAWAEKAGHTITELFPTEVPILSNEPFIRDRSLQGLALRDINLSvlnpKGKAIISHKMDMLFTH 241
Cdd:pfam03486 160 ATGGLSWPKTGSTGFGYPLAEQFGHTIIPLRPALVPFTIDEPFLFLKRLSGISLKNVVLS----NGKGGITFRGELLFTH 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 242 FGLSGPAALRCSQFVVKALKKfkTNTIQMSIDALPEENSEQLFQRMLKQMKEDPKKGIKNVLKGYVPERYFLFLLEKNEI 321
Cdd:pfam03486 236 RGLSGPAILQLSSYWRRAILK--KGGVTLSIDLLPDLDAEELAARLEKPRGAHPKKSLKNSLAGLLPKRLAEFLLEQAGI 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 322 DGSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGGVSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTGGYNI 401
Cdd:pfam03486 314 EPDKKLAQLSKKELAALAQLLKAWTFTPNGTEGYRTAEVTAGGVDTKELSSKTMESKKVPGLFFAGEVLDVDGWTGGYNL 393
|
410
....*....|..
gi 446481005 402 TSALVTGRIAGT 413
Cdd:pfam03486 394 QWAWSSGYAAGQ 405
|
|
| YhiN |
COG2081 |
Predicted flavoprotein YhiN [General function prediction only]; |
6-418 |
0e+00 |
|
Predicted flavoprotein YhiN [General function prediction only];
Pssm-ID: 441684 [Multi-domain] Cd Length: 402 Bit Score: 532.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 6 IVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNEDIIT 85
Cdd:COG2081 1 IVIGAGAAGLMAAITAAERGARVLLLEKNPKVGRKILISGGGRCNFTNSEPLPEFLNYYGGNPHFLKSALSRFTPEDLIA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 86 FFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKaVILQTGEVLETNHVVIAVGG 165
Cdd:COG2081 81 FFEGLGIETKEESSGRVFPDSSKASDILRALLAELREAGVEIRLRTRVTGIEKEDGGFG-VETPDGETVRADAVVLATGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 166 KSVPQTGSTGDGYAWAEKAGHTITELFPTEVPILSNEPFIRDrsLQGLALRDINLSVlnpKGKAIISHKMDMLFTHFGLS 245
Cdd:COG2081 160 LSYPKLGSTGDGYRLAEQFGHTITPLRPALVPLTLSEHFFKR--LAGLSLKNVALSV---GGKKIASFRGELLFTHRGLS 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 246 GPAALRCSQFVVKALKKfktNTIQMSIDALPEENSEQLFQRMLKQMKEDPKKGIKNVLKGYVPERYFLFLLEKNEIDGse 325
Cdd:COG2081 235 GPAILQLSSYWRDALKK---GGATLTIDLLPDLDLEELDARLARPREKNGKKSLKNVLRGLLPKRLAALLLELADPDK-- 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 326 QAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGGVSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTGGYNITSAL 405
Cdd:COG2081 310 PLAQLSKKEREALAALLKAWPLTPTGTRGYDEAIVTAGGVDTKELDPKTMESKKVPGLYFAGEVLDVDGPTGGYNLQWAW 389
|
410
....*....|...
gi 446481005 406 VTGRIAGTTAGEN 418
Cdd:COG2081 390 SSGYAAGQAAAAW 402
|
|
| TIGR00275 |
TIGR00275 |
flavoprotein, HI0933 family; The model when searched with a partial length search brings in ... |
6-412 |
5.01e-179 |
|
flavoprotein, HI0933 family; The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity]
Pssm-ID: 272992 [Multi-domain] Cd Length: 400 Bit Score: 504.82 E-value: 5.01e-179
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 6 IVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNEDIIT 85
Cdd:TIGR00275 1 IIIGGGAAGLMAAITAARAGLSVLLLEKNKKIGKKLLISGGGRCNLTNSCPTPEFVAYYPRNGKFLRSALSRFSNKDLID 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 86 FFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGqtkAVILQT-GEVLETNHVVIAVG 164
Cdd:TIGR00275 81 FFESLGLELKVEEDGRVFPCSDSAADVLDALLNELKELGVEILTNSKVKSIEKEDG---GFGVETsGGEYEADKVIIATG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 165 GKSVPQTGSTGDGYAWAEKAGHTITELFPTEVPILSNEPFIRDrsLQGLALRDINLSVLNpkGKAIISHKMDMLFTHFGL 244
Cdd:TIGR00275 158 GLSYPQLGSTGDGYEIAESLGHTIVPPVPALVPLTLDESFLKE--LSGISLDGVVLSLVN--GKKVLEEFGELLFTHFGL 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 245 SGPAALRCSQFVVKALKKFKTNTIQmsIDALPEENSEQLFQRMLKQMKEDPKKGIKNVLKGYVPERYFLFLLEKNEIDGS 324
Cdd:TIGR00275 234 SGPAILDLSAFAARALLKHKGVELE--IDLLPDLSEEELEQRLKRLRKSNPKKTVKNILKGLLPKRLAELLLEQLGIDPD 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 325 EQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGGVSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTGGYNITSA 404
Cdd:TIGR00275 312 LPAAQLSKKEIKKLVQLLKNWPFTISGTRGFKEAEVTAGGVSLKEINPKTMESKLVPGLYFAGEVLDIDGDTGGYNLQWA 391
|
....*...
gi 446481005 405 LVTGRIAG 412
Cdd:TIGR00275 392 WSSGYLAG 399
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
1-420 |
2.06e-12 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 68.32 E-value: 2.06e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 1 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGrCNVTN------------RLPLDEIVKhipgNG 68
Cdd:COG1053 2 HEYDVVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGGHTAAAQGG-INAAGtnvqkaagedspEEHFYDTVK----GG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 69 RFLysafsifNNED-----------IITFFENLGVKLKEEDHGR------------MFPVSNKAQSVVDALLTRLKDLGV 125
Cdd:COG1053 77 DGL-------ADQDlvealaeeapeAIDWLEAQGVPFSRTPDGRlpqfgghsvgrtCYAGDGTGHALLATLYQAALRLGV 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 126 KIRTNTPVETIEYENGQTKAVILQ--TGE--VLETNHVVIAVGG------------------KSVPQTGSTGDGYAWAEK 183
Cdd:COG1053 150 EIFTETEVLDLIVDDGRVVGVVARdrTGEivRIRAKAVVLATGGfgrnyemraeylpeaegaLSTNAPGNTGDGIAMALR 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 184 AG-----------HtitelfPTEVPilsnepfiRDRSLQGLALRDINLSVL-NPKGK---------AIISHKMdmlFTHF 242
Cdd:COG1053 230 AGaaladmefvqfH------PTGLP--------GDGGLISEGARGKPGGILvNKEGErfmneyaprDVVSRAI---LEEI 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 243 GlsGPAALRCSQFVVKALKKFKTNTIQM---SIDALPEenseqlfqrmlkQMKEDPKKgiknvLKGYVpERYFLFllEKN 319
Cdd:COG1053 293 D--EPAYLVLDLRHRRRLEEYLEAGYLVkadTIEELAA------------KLGIDAAE-----LAATV-ARYNAA--AKA 350
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 320 EIDG-SEQAGQVSHEKIRALvkdfkEFTVNVNGTQsiekafvtgGGVsvkEINPKEMSSKFTN----GLYFCGEVL-DIH 393
Cdd:COG1053 351 GVDPrGTCLGPIKEGPFYAI-----PVRPGVHYTM---------GGL---RVDADARVLDADGtpipGLYAAGEAAgSVH 413
|
490 500
....*....|....*....|....*....
gi 446481005 394 G--YTGGYNITSALVTGRIAGTTAGENAK 420
Cdd:COG1053 414 GanRLGGNSLGDALVFGRIAGRHAAEYAK 442
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
4-209 |
6.84e-12 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 66.54 E-value: 6.84e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 4 DVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRC--NVTNRLPLDEIVKHI---PGNGRFL----YSA 74
Cdd:pfam00890 1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGGATAWSSGGIDalGNPPQGGIDSPELHPtdtLKGLDELadhpYVE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 75 FSIFNNEDIITFFENLGVKLKEEDHGR---------------MFPVSNK------AQSVVDALLTRLKDLGVKIRTNTPV 133
Cdd:pfam00890 81 AFVEAAPEAVDWLEALGVPFSRTEDGHldlrplgglsatwrtPHDAADRrrglgtGHALLARLLEGLRKAGVDFQPRTAA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 134 ETIEYENGQ-------------------TKAVILQTG--EVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTITELF 192
Cdd:pfam00890 161 DDLIVEDGRvtgavvenrrngrevriraIAAVLLATGgfGRLAELLLPAAGYADTTNPPANTGDGLALALRAGAALTDDL 240
|
250
....*....|....*...
gi 446481005 193 PTEVPIL-SNEPFIRDRS 209
Cdd:pfam00890 241 MEFVQFHpTSLVGIRLGS 258
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
109-163 |
4.88e-11 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 64.49 E-value: 4.88e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 446481005 109 AQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAV 163
Cdd:COG1233 221 MGALADALARLAEELGGEIRTGAEVERILVEGGRATGVRLADGEEIRADAVVSNA 275
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
1-185 |
1.14e-07 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 53.02 E-value: 1.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 1 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDK---GNKLGRKLAISGGG-----RCNVTNRL-----PLDEIVKHIPGN 67
Cdd:COG0654 2 MRTDVLIVGGGPAGLALALALARAGIRVTVVERappPRPDGRGIALSPRSlellrRLGLWDRLlargaPIRGIRVRDGSD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 68 GRFLYSafsifnnediitffenlgVKLKEEDHGRMFPVSNKAqsVVDALLTRLKDLGVKIRTNTPVETIEyENGQTKAVI 147
Cdd:COG0654 82 GRVLAR------------------FDAAETGLPAGLVVPRAD--LERALLEAARALGVELRFGTEVTGLE-QDADGVTVT 140
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 446481005 148 LQTGEVLETNHVVIAVGGKSV--PQTGSTGDGYAWAEKAG 185
Cdd:COG0654 141 LADGRTLRADLVVGADGARSAvrRLLGIGFTGRDYPQRAL 180
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
112-165 |
1.02e-06 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 50.29 E-value: 1.02e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 446481005 112 VVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVlETNHVVIAVGG 165
Cdd:COG0665 153 LVRALARAARAAGVRIREGTPVTGLEREGGRVTGVRTERGTV-RADAVVLAAGA 205
|
|
| GG-red-SF |
TIGR02032 |
geranylgeranyl reductase family; This model represents a subfamily which includes ... |
3-168 |
3.82e-06 |
|
geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 273936 [Multi-domain] Cd Length: 295 Bit Score: 48.47 E-value: 3.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 3 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGnKLGRKLAISGG--GRCNVTNRLPLDEIVKhiPGNGRFLYSAFSIFNN 80
Cdd:TIGR02032 1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEKK-SFPRYKPCGGAlsPRALEELDLPGELIVN--LVRGARFFSPNGDSVE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 81 EDIITFFENLgVKLKEEDHgrmfpvsnkaqsvvdALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVV 160
Cdd:TIGR02032 78 IPIETELAYV-IDRDAFDE---------------QLAERAQEAGAELRLGTRVLDVEIHDDRVVVIVRGSEGTVTAKIVI 141
|
....*...
gi 446481005 161 IAVGGKSV 168
Cdd:TIGR02032 142 GADGSRSI 149
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
100-163 |
5.28e-06 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 48.29 E-value: 5.28e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446481005 100 GRMFPVSNKAQSVVDALLTRLKDlgVKIRTNTPVETIEYENGQTkAVILQTGEVLETNHVVIAV 163
Cdd:COG1232 200 EVFGYLRGGLGTLVEALAEALEA--GEIRLGTRVTAIEREGGGW-RVTTSDGETIEADAVVSAT 260
|
|
| PRK12842 |
PRK12842 |
putative succinate dehydrogenase; Reviewed |
114-193 |
2.24e-05 |
|
putative succinate dehydrogenase; Reviewed
Pssm-ID: 237224 [Multi-domain] Cd Length: 574 Bit Score: 46.61 E-value: 2.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 114 DALLTRL----KDLGVKIRTNTPVETIEYENGQTKAVILQTG----EVLETNHVVIAVGGKS------------------ 167
Cdd:PRK12842 214 NALAARLaksaLDLGIPILTGTPARELLTEGGRVVGARVIDAggerRITARRGVVLACGGFShdlariarayphlargge 293
|
90 100 110
....*....|....*....|....*....|
gi 446481005 168 ----VPqTGSTGDGYAWAEKAGHTITELFP 193
Cdd:PRK12842 294 hlspVP-AGNTGDGIRLAEAVGGAVDIRFP 322
|
|
| PRK08274 |
PRK08274 |
FAD-dependent tricarballylate dehydrogenase TcuA; |
3-165 |
2.29e-05 |
|
FAD-dependent tricarballylate dehydrogenase TcuA;
Pssm-ID: 236214 [Multi-domain] Cd Length: 466 Bit Score: 46.41 E-value: 2.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 3 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK--LGRKLAISGGGRCN-------VTNRLP----LDEIVKHIPGNGR 69
Cdd:PRK08274 5 VDVLVIGGGNAALCAALAAREAGASVLLLEAAPRewRGGNSRHTRNLRCMhdapqdvLVGAYPeeefWQDLLRVTGGRTD 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 70 FLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQ------SVVDALLTRLKDLGVKIRTNTPVETIEYENGQT 143
Cdd:PRK08274 85 EALARLLIRESSDCRDWMRKHGVRFQPPLSGALHVARTNAFfwgggkALVNALYRSAERLGVEIRYDAPVTALELDDGRF 164
|
170 180
....*....|....*....|....*.
gi 446481005 144 KAVILQTG----EVLETNHVVIAVGG 165
Cdd:PRK08274 165 VGARAGSAaggaERIRAKAVVLAAGG 190
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
10-162 |
2.64e-05 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 45.73 E-value: 2.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 10 GGPSGLMAAIGAAEEGANVLLLDKGNKLGRKlaISGGGRC----NVTNRLPLDEIVKHIPGNGRFlysafsIFNNEDIIT 85
Cdd:COG0644 1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDK--ICGGGLLpralEELEPLGLDEPLERPVRGARF------YSPGGKSVE 72
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446481005 86 FFEnlgvklkEEDHGRMFPVSNkaqsVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKaVILQTGEVLETNHVVIA 162
Cdd:COG0644 73 LPP-------GRGGGYVVDRAR----FDRWLAEQAEEAGAEVRTGTRVTDVLRDDGRVV-VRTGDGEEIRADYVVDA 137
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
101-185 |
4.52e-05 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 45.19 E-value: 4.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 101 RMFPVSNKAqsVVDALLTRLKDLGVKIRTNTPVETIEYENGQtkAVILQTGEVLETNHVVIAVGgkSVPQTgstgdgyAW 180
Cdd:COG0446 158 RLLGVLDPE--MAALLEEELREHGVELRLGETVVAIDGDDKV--AVTLTDGEEIPADLVVVAPG--VRPNT-------EL 224
|
....*
gi 446481005 181 AEKAG 185
Cdd:COG0446 225 AKDAG 229
|
|
| Ndh |
COG1252 |
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; |
110-169 |
5.28e-05 |
|
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
Pssm-ID: 440864 [Multi-domain] Cd Length: 386 Bit Score: 45.12 E-value: 5.28e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 110 QSVVDALLTRLKDLGVKIRTNTPVETIEyENGqtkaVILQTGEVLETNHVVIAVGGKSVP 169
Cdd:COG1252 203 EKLSEAAEKELEKRGVEVHTGTRVTEVD-ADG----VTLEDGEEIPADTVIWAAGVKAPP 257
|
|
| PRK07333 |
PRK07333 |
ubiquinone biosynthesis hydroxylase; |
105-167 |
1.37e-04 |
|
ubiquinone biosynthesis hydroxylase;
Pssm-ID: 180935 [Multi-domain] Cd Length: 403 Bit Score: 43.81 E-value: 1.37e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446481005 105 VSNKAqsVVDALLTRLKDLGVKIRTNTPVETIEYENGQTkAVILQTGEVLETNHVVIAVGGKS 167
Cdd:PRK07333 108 VENRV--LINALRKRAEALGIDLREATSVTDFETRDEGV-TVTLSDGSVLEARLLVAADGARS 167
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
114-164 |
1.78e-04 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 43.08 E-value: 1.78e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 446481005 114 DALLTRLKDLGVKIRTNTPVETIEyENGQTKAVILQTGEVLETNHVVIAVG 164
Cdd:pfam07992 197 AALEKALEKNGVEVRLGTSVKEII-GDGDGVEVILKDGTEIDADLVVVAIG 246
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
2-169 |
2.22e-04 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 43.31 E-value: 2.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 2 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLG---RklaisgggrcnvTNRLP---LDeivkhIPgngRFLYSaF 75
Cdd:COG2072 6 HVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGgtwR------------DNRYPglrLD-----TP---SHLYS-L 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 76 SifnnediitFFENlgvklkeEDHGRMFP----VSNKAQSVVDALltrlkDLGVKIRTNTPVETIEYENGQTK-AVILQT 150
Cdd:COG2072 65 P---------FFPN-------WSDDPDFPtgdeILAYLEAYADKF-----GLRRPIRFGTEVTSARWDEADGRwTVTTDD 123
|
170
....*....|....*....
gi 446481005 151 GEVLETNHVVIAVGGKSVP 169
Cdd:COG2072 124 GETLTARFVVVATGPLSRP 142
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
110-163 |
2.28e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 43.34 E-value: 2.28e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 446481005 110 QSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQtGEVLETNHVVIAV 163
Cdd:PRK07233 198 ATLIDALAEAIEARGGEIRLGTPVTSVVIDGGGVTGVEVD-GEEEDFDAVISTA 250
|
|
| Amino_oxidase |
pfam01593 |
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ... |
39-163 |
2.60e-04 |
|
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.
Pssm-ID: 396255 [Multi-domain] Cd Length: 446 Bit Score: 43.25 E-value: 2.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 39 RKLAISGGGRCNVTNRLPLDEIVKHIPgngrFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVsNKAQSVVDALLT 118
Cdd:pfam01593 140 LFLGRRGPGDVEVWDRLIDPELFAALP----FASGAFAGDPSELSAGLALPLLWALLGEGGSLLLPR-GGLGALPDALAA 214
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 446481005 119 RLkdLGVKIRTNTPVETIEYENGqTKAVILQTGEVLETNHVVIAV 163
Cdd:pfam01593 215 QL--LGGDVRLNTRVRSIDREGD-GVTVTLTDGEVIEADAVIVTV 256
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
4-165 |
3.31e-04 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 42.38 E-value: 3.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 4 DVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGR-------KLaISGGGRCNVTNRLP---------LDEIVK----H 63
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGSgasgrnaGL-IHPGLRYLEPSELArlalealdlWEELEEelgiD 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 64 IPGNGRFLYSAFSIFNNEDIITFFENL---GVK---LKEEDHGRMFPVSNK--------------AQSVVDALLTRLKDL 123
Cdd:pfam01266 80 CGFRRCGVLVLARDEEEEALEKLLAALrrlGVPaelLDAEELRELEPLLPGlrgglfypdgghvdPARLLRALARAAEAL 159
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 446481005 124 GVKIRTNTPVETIEYENGQTKAVilQTGEVletNHVVIAVGG 165
Cdd:pfam01266 160 GVRIIEGTEVTGIEEEGGVWGVV--TTGEA---DAVVNAAGA 196
|
|
| PRK08274 |
PRK08274 |
FAD-dependent tricarballylate dehydrogenase TcuA; |
361-419 |
5.02e-04 |
|
FAD-dependent tricarballylate dehydrogenase TcuA;
Pssm-ID: 236214 [Multi-domain] Cd Length: 466 Bit Score: 42.17 E-value: 5.02e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446481005 361 TGGGVSVKEinpkEMSSKFTNG-----LYFCGE-----VLDiHGYTGGYNITSALVTGRIAGTTAGENA 419
Cdd:PRK08274 398 TYLGLKVDE----DARVRFADGrpspnLFAAGEmmagnVLG-KGYPAGVGLTIGAVFGRIAGEEAARHA 461
|
|
| PTZ00318 |
PTZ00318 |
NADH dehydrogenase-like protein; Provisional |
110-171 |
1.53e-03 |
|
NADH dehydrogenase-like protein; Provisional
Pssm-ID: 185553 [Multi-domain] Cd Length: 424 Bit Score: 40.52 E-value: 1.53e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 446481005 110 QSVVDALLTRLKDLGVKIRTNTPVETIeyengQTKAVILQTGEVLETNHVVIAVGGKSVPQT 171
Cdd:PTZ00318 228 QALRKYGQRRLRRLGVDIRTKTAVKEV-----LDKEVVLKDGEVIPTGLVVWSTGVGPGPLT 284
|
|
| YdhS |
COG4529 |
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only]; |
3-164 |
2.06e-03 |
|
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
Pssm-ID: 443597 [Multi-domain] Cd Length: 466 Bit Score: 40.32 E-value: 2.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 3 YDVIVIGGGPSGLMAAI---GAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNrLPLDEIvkhipgngrflySAFSifn 79
Cdd:COG4529 6 KRIAIIGGGASGTALAIhllRRAPEPLRITLFEPRPELGRGVAYSTDSPEHLLN-VPAGRM------------SAFP--- 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 80 nEDIITFFENL---GVKLKEEDHGRMFP--------VsnkaQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTkAVIL 148
Cdd:COG4529 70 -DDPDHFLRWLrenGARAAPAIDPDAFVprrlfgeyL----RERLAEALARAPAGVRLRHIRAEVVDLERDDGGY-RVTL 143
|
170
....*....|....*.
gi 446481005 149 QTGEVLETNHVVIAVG 164
Cdd:COG4529 144 ADGETLRADAVVLATG 159
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
114-169 |
3.17e-03 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 39.41 E-value: 3.17e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481005 114 DALLTR----LKDLGVKIRTNTPVETIEYENgqtKAVILQTGEVLETNHVVIAVGGKSVP 169
Cdd:COG0446 36 EDLLVRtpesFERKGIDVRTGTEVTAIDPEA---KTVTLRDGETLSYDKLVLATGARPRP 92
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
1-35 |
7.83e-03 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 38.23 E-value: 7.83e-03
10 20 30
....*....|....*....|....*....|....*
gi 446481005 1 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGN 35
Cdd:PRK06292 2 EKYDVIVIGAGPAGYVAARRAAKLGKKVALIEKGP 36
|
|
| |
