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Conserved domains on  [gi|446481907|ref|WP_000559761|]
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MULTISPECIES: YfcL family protein [Enterobacteriaceae]

Protein Classification

YfcL family protein( domain architecture ID 10556271)

YfcL family protein similar to Escherichia coli protein YfcL

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YfcL pfam08891
YfcL protein; This family of proteins are functionally uncharacterized. THey are related to ...
 3-87 1.68e-35

YfcL protein; This family of proteins are functionally uncharacterized. THey are related to the short YfcL protein from E. coli.


:

Pssm-ID: 430291  Cd Length: 83  Bit Score: 115.39  E-value: 1.68e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481907   3 AEFESRILALIDGMVDHASDDELFASGYLRGHLTLAIAELESGDDHSAQAVHTTVSQSLEKAigAGELSPRDQALVTDMW 82
Cdd:pfam08891  1 AEFEERLLALIDDMVEHASDDELFAGGYLRGHFALAVAELEVEGETSLEALKERVEESLEKA--RGELSPADQALVAALW 78


                 ....*
gi 446481907  83 EHLFQ 87
Cdd:pfam08891 79 QELAQ 83
 
Name Accession Description Interval E-value
YfcL pfam08891
YfcL protein; This family of proteins are functionally uncharacterized. THey are related to ...
 3-87 1.68e-35

YfcL protein; This family of proteins are functionally uncharacterized. THey are related to the short YfcL protein from E. coli.


Pssm-ID: 430291  Cd Length: 83  Bit Score: 115.39  E-value: 1.68e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481907   3 AEFESRILALIDGMVDHASDDELFASGYLRGHLTLAIAELESGDDHSAQAVHTTVSQSLEKAigAGELSPRDQALVTDMW 82
Cdd:pfam08891  1 AEFEERLLALIDDMVEHASDDELFAGGYLRGHFALAVAELEVEGETSLEALKERVEESLEKA--RGELSPADQALVAALW 78


                 ....*
gi 446481907  83 EHLFQ 87
Cdd:pfam08891 79 QELAQ 83
 
Name Accession Description Interval E-value
YfcL pfam08891
YfcL protein; This family of proteins are functionally uncharacterized. THey are related to ...
 3-87 1.68e-35

YfcL protein; This family of proteins are functionally uncharacterized. THey are related to the short YfcL protein from E. coli.


Pssm-ID: 430291  Cd Length: 83  Bit Score: 115.39  E-value: 1.68e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446481907   3 AEFESRILALIDGMVDHASDDELFASGYLRGHLTLAIAELESGDDHSAQAVHTTVSQSLEKAigAGELSPRDQALVTDMW 82
Cdd:pfam08891  1 AEFEERLLALIDDMVEHASDDELFAGGYLRGHFALAVAELEVEGETSLEALKERVEESLEKA--RGELSPADQALVAALW 78


                 ....*
gi 446481907  83 EHLFQ 87
Cdd:pfam08891 79 QELAQ 83
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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