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Conserved domains on  [gi|446495662|ref|WP_000573516|]
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MULTISPECIES: BA3454 family stress response protein [Bacillus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
BA3454_fam NF033491
BA3454 family stress response protein; BA3454, a protein less than 45 amino acids long, is ...
1-43 2.63e-19

BA3454 family stress response protein; BA3454, a protein less than 45 amino acids long, is up-regulated strongly by SpxA2 during stress conditions. Related proteins are found widely in the genus Bacillus, although not in Bacillus subtilis.


:

Pssm-ID: 411133  Cd Length: 43  Bit Score: 71.38  E-value: 2.63e-19
                        10        20        30        40
                ....*....|....*....|....*....|....*....|...
gi 446495662  1 MIEVCVTVNYKDRNYQTNVIVSKDTIWTKIEQLAEEQVKKQWS 43
Cdd:NF033491  1 MIEVTVTVNYKGKNYQTNVIANKDTSEEEILRLAEEQVKKQWK 43
 
Name Accession Description Interval E-value
BA3454_fam NF033491
BA3454 family stress response protein; BA3454, a protein less than 45 amino acids long, is ...
1-43 2.63e-19

BA3454 family stress response protein; BA3454, a protein less than 45 amino acids long, is up-regulated strongly by SpxA2 during stress conditions. Related proteins are found widely in the genus Bacillus, although not in Bacillus subtilis.


Pssm-ID: 411133  Cd Length: 43  Bit Score: 71.38  E-value: 2.63e-19
                        10        20        30        40
                ....*....|....*....|....*....|....*....|...
gi 446495662  1 MIEVCVTVNYKDRNYQTNVIVSKDTIWTKIEQLAEEQVKKQWS 43
Cdd:NF033491  1 MIEVTVTVNYKGKNYQTNVIANKDTSEEEILRLAEEQVKKQWK 43
chap_CCT_gamma TIGR02344
T-complex protein 1, gamma subunit; Members of this family, all eukaryotic, are part of the ...
7-40 2.61e-03

T-complex protein 1, gamma subunit; Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT gamma chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.


Pssm-ID: 274085 [Multi-domain]  Cd Length: 524  Bit Score: 32.79  E-value: 2.61e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 446495662    7 TVNYKDRNYQTNVIVSKDTIWTKIEQLAEEQVKK 40
Cdd:TIGR02344 239 PLEYKKGESQTNIEITKEEDWNRILQMEEEYVQL 272
 
Name Accession Description Interval E-value
BA3454_fam NF033491
BA3454 family stress response protein; BA3454, a protein less than 45 amino acids long, is ...
1-43 2.63e-19

BA3454 family stress response protein; BA3454, a protein less than 45 amino acids long, is up-regulated strongly by SpxA2 during stress conditions. Related proteins are found widely in the genus Bacillus, although not in Bacillus subtilis.


Pssm-ID: 411133  Cd Length: 43  Bit Score: 71.38  E-value: 2.63e-19
                        10        20        30        40
                ....*....|....*....|....*....|....*....|...
gi 446495662  1 MIEVCVTVNYKDRNYQTNVIVSKDTIWTKIEQLAEEQVKKQWS 43
Cdd:NF033491  1 MIEVTVTVNYKGKNYQTNVIANKDTSEEEILRLAEEQVKKQWK 43
chap_CCT_gamma TIGR02344
T-complex protein 1, gamma subunit; Members of this family, all eukaryotic, are part of the ...
7-40 2.61e-03

T-complex protein 1, gamma subunit; Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT gamma chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.


Pssm-ID: 274085 [Multi-domain]  Cd Length: 524  Bit Score: 32.79  E-value: 2.61e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 446495662    7 TVNYKDRNYQTNVIVSKDTIWTKIEQLAEEQVKK 40
Cdd:TIGR02344 239 PLEYKKGESQTNIEITKEEDWNRILQMEEEYVQL 272
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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