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Conserved domains on  [gi|446502462|ref|WP_000580316|]
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MULTISPECIES: spermidine/putrescine ABC transporter permease PotC [Enterobacteriaceae]

Protein Classification

spermidine/putrescine ABC transporter permease PotC( domain architecture ID 11484305)

spermidine/putrescine ABC transporter permease PotC is a transmembrane (TM) subunit of the periplasmic binding protein (PBP)-dependent ATP-binding cassette (ABC) transporter PotABCD that is responsible for the translocation across the membrane of putrescine and spermidine

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
potC PRK09500
spermidine/putrescine ABC transporter membrane protein; Reviewed
 2-257 5.86e-154

spermidine/putrescine ABC transporter membrane protein; Reviewed


:

Pssm-ID: 236542 [Multi-domain]  Cd Length: 256  Bit Score: 429.02  E-value: 5.86e-154
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462   2 IGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTTKWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLT 81
Cdd:PRK09500   1 MGRLLRGGFMTLVYAYLYIPIIILIVNSFNSSRFGINWKGFTTKWYELLFNNDSLLQAAQHSLTMAVFSATFATLIGSLT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  82 AVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEA 161
Cdd:PRK09500  81 AVALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFAHITFCLPFVVVTVYSRLKGFDVRMLEA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 162 AKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLS 241
Cdd:PRK09500 161 AKDLGASEFTILRKIILPLALPAVAAGWLLSFTLSLDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLS 240

                        250
                 ....*....|....*.
gi 446502462 242 LVMVIASQLIARDKTK 257
Cdd:PRK09500 241 LVLVILSQLLARDKTK 256
 
Name Accession Description Interval E-value
potC PRK09500
spermidine/putrescine ABC transporter membrane protein; Reviewed
 2-257 5.86e-154

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 236542 [Multi-domain]  Cd Length: 256  Bit Score: 429.02  E-value: 5.86e-154
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462   2 IGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTTKWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLT 81
Cdd:PRK09500   1 MGRLLRGGFMTLVYAYLYIPIIILIVNSFNSSRFGINWKGFTTKWYELLFNNDSLLQAAQHSLTMAVFSATFATLIGSLT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  82 AVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEA 161
Cdd:PRK09500  81 AVALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFAHITFCLPFVVVTVYSRLKGFDVRMLEA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 162 AKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLS 241
Cdd:PRK09500 161 AKDLGASEFTILRKIILPLALPAVAAGWLLSFTLSLDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLS 240

                        250
                 ....*....|....*.
gi 446502462 242 LVMVIASQLIARDKTK 257
Cdd:PRK09500 241 LVLVILSQLLARDKTK 256
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 1-258 2.45e-86

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 257.73  E-value: 2.45e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462   1 MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFG-INWQGFTTKWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGS 79
Cdd:COG1177    3 RLGRLLLRLFLALVLLFLYLPILVLVLYSFNDSWFLtFPPEGFTLRWYAELFSDPRLLDALLNSLLIALLSTLLATVLGT 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  80 LTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRML 159
Cdd:COG1177   83 PAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLSGGLWGLILAHVVFTLPFVVLVVLARLQGFDPSLE 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 160 EAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLV 239
Cdd:COG1177  163 EAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAGPGVTTLPVYIYSMIRRGISPEINALSTLLIL 242

                        250
                 ....*....|....*....
gi 446502462 240 LSLVMVIASQLIARDKTKG 258
Cdd:COG1177  243 LSLLLLLLAERLRRRGERR 261
modB_ABC TIGR02141
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ...
 63-254 2.72e-21

molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]


Pssm-ID: 273993 [Multi-domain]  Cd Length: 208  Bit Score: 88.45  E-value: 2.72e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462   63 SLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLF----------MLLGIQLGF-WS- 130
Cdd:TIGR02141   3 SLKVAVIATLLLLPLGIPVAWLLARSRFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFgpngpigkllELFGISLVFtFTg 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  131 LLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGP- 209
Cdd:TIGR02141  83 AVLASVIVSFPLMVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFAGNi 162

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 446502462  210 --SYEILPLKIYSMVKVGVSpEVNALATILLVLSLVMVIASQLIARD 254
Cdd:TIGR02141 163 pgETQTIPLAIYDAVESDYE-LAHQLSLVLLAISLIVLLLVELLNKR 208
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 60-245 4.89e-19

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 82.33  E-value: 4.89e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  60 AQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLG-----IQLGFWSLLFS 134
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLgwgilPGLGLPALILA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 135 HItFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEIL 214
Cdd:cd06261   81 LL-LIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGP 159

                        170       180       190
                 ....*....|....*....|....*....|.
gi 446502462 215 PLKIYSMVKVGVSPEVNALATILLVLSLVMV 245
Cdd:cd06261  160 GTGLLLIFAILFPGDLGVAAAVALILLLLSL 190
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 74-253 1.35e-11

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 61.55  E-value: 1.35e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462   74 ATLIGSLTAValyRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKG 153
Cdd:pfam00528   1 GIPLGIIAAL---RRGRRLDRLLRPLIDLLQALPSFVLAILLVVIAILSILGHGILPAIILALLGWAGYARLIRRAALRS 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  154 FDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPS---YEILPLKIYSMVKVGVSPeV 230
Cdd:pfam00528  78 LPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPglgLLLIEAILGYDYPEIQGP-V 156

                         170       180
                  ....*....|....*....|...
gi 446502462  231 NALATILLVLSLVMVIASQLIAR 253
Cdd:pfam00528 157 LAAALILLLLNLLVDILQRLLDP 179
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 63-188 5.99e-04

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 39.84  E-value: 5.99e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  63 SLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAislLVLFMLLGIQ--LGFWSLLFS------ 134
Cdd:NF038017   1 SLRVSGTATLIAALIGIPLGALLALRRFPGRRLVISLLNTLMGLPPVVVG---LIVYLLLSRSgpLGFLGLLYTptamii 77

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 446502462 135 -HITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASE----FTILRKIILPLaMPAVAAG 188
Cdd:NF038017  78 aQAVLALPIVAGLTLAAVQGLDPELRLQILSLGATRwqalWTLLKEARFAL-LAAVLAG 135
 
Name Accession Description Interval E-value
potC PRK09500
spermidine/putrescine ABC transporter membrane protein; Reviewed
 2-257 5.86e-154

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 236542 [Multi-domain]  Cd Length: 256  Bit Score: 429.02  E-value: 5.86e-154
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462   2 IGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTTKWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLT 81
Cdd:PRK09500   1 MGRLLRGGFMTLVYAYLYIPIIILIVNSFNSSRFGINWKGFTTKWYELLFNNDSLLQAAQHSLTMAVFSATFATLIGSLT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  82 AVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEA 161
Cdd:PRK09500  81 AVALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFAHITFCLPFVVVTVYSRLKGFDVRMLEA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 162 AKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLS 241
Cdd:PRK09500 161 AKDLGASEFTILRKIILPLALPAVAAGWLLSFTLSLDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLS 240

                        250
                 ....*....|....*.
gi 446502462 242 LVMVIASQLIARDKTK 257
Cdd:PRK09500 241 LVLVILSQLLARDKTK 256
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 1-258 2.45e-86

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 257.73  E-value: 2.45e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462   1 MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFG-INWQGFTTKWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGS 79
Cdd:COG1177    3 RLGRLLLRLFLALVLLFLYLPILVLVLYSFNDSWFLtFPPEGFTLRWYAELFSDPRLLDALLNSLLIALLSTLLATVLGT 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  80 LTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRML 159
Cdd:COG1177   83 PAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLSGGLWGLILAHVVFTLPFVVLVVLARLQGFDPSLE 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 160 EAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLV 239
Cdd:COG1177  163 EAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAGPGVTTLPVYIYSMIRRGISPEINALSTLLIL 242

                        250
                 ....*....|....*....
gi 446502462 240 LSLVMVIASQLIARDKTKG 258
Cdd:COG1177  243 LSLLLLLLAERLRRRGERR 261
PRK10592 PRK10592
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
 27-253 6.35e-54

putrescine transporter subunit: membrane component of ABC superfamily; Provisional


Pssm-ID: 182574  Cd Length: 281  Bit Score: 175.81  E-value: 6.35e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  27 VNSFNSSRFGINWQGFTTKWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRY-RFRGKPFVSGMLFVVMM 105
Cdd:PRK10592  32 IYSFNSSKLVTVWAGWSTRWYGELFRDDAMMSAVGLSLTIAACAATAAAILGTIAAVVMVRFgRFRGSNGFAFMITAPLV 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 106 SPDIVMAISLLVLFMLLGIQLGF------WSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILP 179
Cdd:PRK10592 112 MPDVITGLSLLLLFVALAHAIGWpadrgmLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGATPLKVFFVITLP 191

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 446502462 180 LAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALAT-ILLVLSLVMVIASQLIAR 253
Cdd:PRK10592 192 MIMPAIISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALATlILGVVGIVGFIAWYLMAR 266
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
41-255 1.14e-32

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 124.89  E-value: 1.14e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  41 GFTTKWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLF- 119
Cdd:COG1178  321 NLTLDNYRFVLLDPSLLRALLNSLLLALLAALLAVLLALLLAYLVRRRRGRLARLLDRLAMLPYAVPGIVLGLGLLLLFn 400

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 120 --MLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSM 197
Cdd:COG1178  401 rpLPLLLYGTLAILVLAYVVRFLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSM 480

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 446502462 198 DDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDK 255
Cdd:COG1178  481 KELSATLLLRPPGFETLAVLIYQLASSGRYGEAAALALLLVLVSLLPVLLLERLLGRR 538
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
39-261 2.04e-30

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 118.72  E-value: 2.04e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  39 WQGFTTKW--YSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLL 116
Cdd:COG1178   33 LRAFTDGLanFWALLSDPYLWRALGNTLLLALLVTLLSLLLGVPLAWLLARTDFPGRRLLRWLLLLPLALPPYVVALAWI 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 117 VLF-----------MLLGIQL----GFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLA 181
Cdd:COG1178  113 ALFgpngllntllrALFGLEPpdiyGLGGIILVLVLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLL 192

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 182 MPAVAAGWVLSFTLSMDDVVVSSFVtGPSYEILPLKIYSMVKVGVS-PEVNALATILLVLSLVMVIASQLIARDKTKGNT 260
Cdd:COG1178  193 RPAIAAGALLVFLLCLADFGTPLVL-GGGYTTLTTAIYQAWLGDFDlGAAAALALVLLLLVLLLLLLERRLRRRRRYATV 271


                 .
gi 446502462 261 G 261
Cdd:COG1178  272 G 272
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 35-257 4.27e-26

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 102.91  E-value: 4.27e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  35 FGINWQGFttkWYSLLmnNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAIS 114
Cdd:COG0555   36 AGLGWAEF---WAVLT--SPRVLAALKLSLGTALIAALINLVFGLPLAWVLVRYRFPGKRLVDALVDLPFALPTAVAGIA 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 115 LLVLF----------MLLGIQLGF--WSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAM 182
Cdd:COG0555  111 LLLLFgpngwlgqllAPLGIKVAFtpLGIVLAQTFVSLPFVVRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLL 190

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 183 PAVAAGWVLSFTLSMDD----VVVSS---FVTgpsyEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDK 255
Cdd:COG0555  191 PALLTGFALAFARALGEfgavIFIAGnlpMKT----EILPLLIYLKLEEGDYAGATAIALVLLLISFLLLLLINLLQRRS 266


                 ..
gi 446502462 256 TK 257
Cdd:COG0555  267 RR 268
UgpE COG0395
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ...
 40-246 2.90e-25

ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440164 [Multi-domain]  Cd Length: 282  Bit Score: 100.94  E-value: 2.90e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  40 QGFTTKWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLF 119
Cdd:COG0395   56 SEFTLENYRAAFTDGPFGRYLLNSLIVAVVSTVLSLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLIPLYLLF 135

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 120 MLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDD 199
Cdd:COG0395  136 RQLGLLNTYWGLILPYLAFGLPFGIFLLRQFFRSIPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTFIGAWND 215

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 446502462 200 VVVSS-FVTGPSYEILPLKIYSMVkVGVSPEVNALATILLVLSLVMVI 246
Cdd:COG0395  216 FLWPLiLLTSPDLRTLPVGLASFQ-GQYGTDWGLLMAAAVIATLPVLI 262
PotB COG1176
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ...
 30-253 3.92e-25

ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];


Pssm-ID: 440789 [Multi-domain]  Cd Length: 287  Bit Score: 100.61  E-value: 3.92e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  30 FNSSRFGINWQGFTTKWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDI 109
Cdd:COG1176   39 TTRDPYGGVVPGFTLENYARLFTDPLYLKVLLRTLWIALLTTLICLLLGYPIAYFLARAPPRWRNLLLLLVILPFWTSFL 118

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 110 VMAISLLVLF----------MLLGIQLGFWSLLFSHITFC-------LPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTI 172
Cdd:COG1176  119 VRTYAWIVLLgrngllnsllLALGLIDEPLRLLYTEFAVViglvyvyLPFMVLPLYAALEKIDPSLLEAARDLGASPWQT 198

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 173 LRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVS-PEVNALATILLVLSLVMVIASQLI 251
Cdd:COG1176  199 FRRVILPLSLPGIIAGSLLVFIPALGAFVTPALLGGGKVLMIGNLIYQQFLSALNwPLAAALAVVLLLIVLLVLLLYLRL 278


                 ..
gi 446502462 252 AR 253
Cdd:COG1176  279 LR 280
ModB COG4149
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ...
 57-257 1.64e-24

ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis


Pssm-ID: 443320 [Multi-domain]  Cd Length: 223  Bit Score: 97.43  E-value: 1.64e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  57 LQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLF-----------MLLGIQ 125
Cdd:COG4149    6 WSALWLSLKVALIATLLLLLLGIPLAWWLARTRFRGKGLLEALVTLPLVLPPTVLGFYLLLLFgrngplgqlleELFGIS 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 126 LGF--WSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVS 203
Cdd:COG4149   86 LVFtwTGAVLASVVVSLPLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGEFGAT 165

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 446502462 204 SFVTG---PSYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTK 257
Cdd:COG4149  166 LMFAGnipGKTQTLPLAIYDAVEAGDYAAAHALSLILLAISFVVLLLLNLLNRRRRR 222
modB_ABC TIGR02141
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ...
 63-254 2.72e-21

molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]


Pssm-ID: 273993 [Multi-domain]  Cd Length: 208  Bit Score: 88.45  E-value: 2.72e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462   63 SLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLF----------MLLGIQLGF-WS- 130
Cdd:TIGR02141   3 SLKVAVIATLLLLPLGIPVAWLLARSRFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFgpngpigkllELFGISLVFtFTg 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  131 LLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGP- 209
Cdd:TIGR02141  83 AVLASVIVSFPLMVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFAGNi 162

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 446502462  210 --SYEILPLKIYSMVKVGVSpEVNALATILLVLSLVMVIASQLIARD 254
Cdd:TIGR02141 163 pgETQTIPLAIYDAVESDYE-LAHQLSLVLLAISLIVLLLVELLNKR 208
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 60-245 4.89e-19

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 82.33  E-value: 4.89e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  60 AQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLG-----IQLGFWSLLFS 134
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLgwgilPGLGLPALILA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 135 HItFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEIL 214
Cdd:cd06261   81 LL-LIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGP 159

                        170       180       190
                 ....*....|....*....|....*....|.
gi 446502462 215 PLKIYSMVKVGVSPEVNALATILLVLSLVMV 245
Cdd:cd06261  160 GTGLLLIFAILFPGDLGVAAAVALILLLLSL 190
PRK15050 PRK15050
2-aminoethylphosphonate transport system permease PhnU; Provisional
 40-261 3.99e-17

2-aminoethylphosphonate transport system permease PhnU; Provisional


Pssm-ID: 237888 [Multi-domain]  Cd Length: 296  Bit Score: 78.89  E-value: 3.99e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  40 QGFTTKWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLF 119
Cdd:PRK15050  55 HGLGLATYRAVLGSPDFRGALLTTLQIAFASTAGCLVLGVLLALVLAFVPFPGASLVGRFIDTFVAFPSFLITLAFTFLY 134

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 120 -----------MLLGIQLGFWSLLFS-------HITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLA 181
Cdd:PRK15050 135 gsagsvnialqRLFGLEAPPLDFLYSpggvilaEITFYTPFVVRPLLAAFAQLDARQLEAAASLGASPWRVARRVILPEA 214

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 182 MPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVS-PEVNALATILLVLSLVMVIASQLIARDKTKGNT 260
Cdd:PRK15050 215 WPALAAGGSLCLLLTLNEFGIVLFTGAKDVVTLPVLIYSKAIVDFDyPTACAIAVVNLALSLGLYALYRRVNRRAGGGSR 294


                 .
gi 446502462 261 G 261
Cdd:PRK15050 295 D 295
MalG COG3833
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ...
 41-222 9.11e-16

ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];


Pssm-ID: 443045 [Multi-domain]  Cd Length: 282  Bit Score: 74.80  E-value: 9.11e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  41 GFTTKWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFM 120
Cdd:COG3833   56 NFTLENYKKLFTETPFLRWFLNSLIVAVVTAIISVFLAALAAYAFSRFRFKGRKAGLLALLLLQMFPAFLALVALYLLLS 135

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 121 LLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDV 200
Cdd:COG3833  136 ALGLLNTLLGLILVYLGGAIPFNTWLMKGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDF 215

                        170       180
                 ....*....|....*....|...
gi 446502462 201 VVSS-FVTGPSYEILPLKIYSMV 222
Cdd:COG3833  216 ILASvLLRSPENYTLAVGLYSFV 238
modB PRK09421
molybdate ABC transporter permease subunit;
57-253 1.86e-15

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 73.42  E-value: 1.86e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  57 LQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIqLGFWSLLFSHI 136
Cdd:PRK09421   8 WQAVLLSLKVSSVAVLFSLPFGILVAWLLARCRFPGKSLLDSLLHLPLVLPPVVTGYLLLISMGRRGF-IGQWLYEWFGI 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 137 TFC--------------LPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVV 202
Cdd:PRK09421  87 SFAfswrgaalaaavmaFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEFGA 166

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 446502462 203 S-SFVTGPSYE--ILPLKIYSMVKV-GVSPEVNALATILLVLSLVMVIASQLIAR 253
Cdd:PRK09421 167 TiTFVSNIPGEtqTIPSAMYTLIQTpGGESAAARLCIISIAIALASLLLSEWLAR 221
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
47-247 9.58e-14

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 69.40  E-value: 9.58e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  47 YSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFML----- 121
Cdd:PRK10971  47 YWEVITNPQVVAAYKVTLLSAFVASIFNAVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVngwyg 126

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 122 -----LGIQLGF-WSLLFSHITFC-LPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFT 194
Cdd:PRK10971 127 ewlakFDIKVTYtWLGIAVAMAFTsIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFT 206

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 446502462 195 LSMDDVVVSSFVTGP---SYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIA 247
Cdd:PRK10971 207 RSLGEFGAVIFIAGNiawKTEVTSLMIFVRLQEFDYPAASAIASVILAASLLLLFS 262
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 50-259 2.22e-12

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 66.24  E-value: 2.22e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462   50 LMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLF--------ML 121
Cdd:TIGR03262  46 YFATPGLLQSLGNSLTVSAIVTAIVVPLAFAFAYALTRSRIPGKGAFRLVALLPLLAPSLLPAISLIYLFgnqgllkgLL 125

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  122 LGIQL-GFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDV 200
Cdd:TIGR03262 126 GGFSIyGFWGIVIGEVFYTFPHALMILVTALSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDF 205

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 446502462  201 VVSSfVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTKGN 259
Cdd:TIGR03262 206 GVPK-VIGGDYNVLATDIYKQVIGQQNFPMGAVVGVLLLLPALLAFGIDRAIQRRQRAQ 263
UgpA COG1175
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
30-255 2.62e-12

ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440788 [Multi-domain]  Cd Length: 298  Bit Score: 65.16  E-value: 2.62e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  30 FNSSRFGINWQGFTTKWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRyRFRGKPFVSGMLFVVMMSPDI 109
Cdd:COG1175   48 TDWNLLGPPPEFVGLDNYARLFTDPRFWNALGNTLLFTVVSVPLQLVLGLLLALLLNR-KLRGRGFFRTLFFLPWVISPV 126

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 110 VMAISLLVLF-----------MLLGIQ---------LGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASE 169
Cdd:COG1175  127 VVALIWKWLFnpdygllnallGALGLEpinwlgdpsLALPAVIIVTVWKGTGFNMLIFLAGLQSIPRELYEAARIDGASP 206

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 170 FTILRKIILPLAMPAVAAGWVLSFTLSMDD----VVVSSFVTGPSYEILPLKIYSMV----KVGVSpevNALATILLVLS 241
Cdd:COG1175  207 WQRFRRITLPLLRPTILFVLVLSTIGALQVfdlvYVLTGGGPGNSTTTLVLYIYQTAfqqfDFGYA---SAIAVVLFLII 283

                        250
                 ....*....|....
gi 446502462 242 LVMVIASQLIARDK 255
Cdd:COG1175  284 LVLTLLQLRLLRRR 297
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 74-253 1.35e-11

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 61.55  E-value: 1.35e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462   74 ATLIGSLTAValyRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKG 153
Cdd:pfam00528   1 GIPLGIIAAL---RRGRRLDRLLRPLIDLLQALPSFVLAILLVVIAILSILGHGILPAIILALLGWAGYARLIRRAALRS 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  154 FDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPS---YEILPLKIYSMVKVGVSPeV 230
Cdd:pfam00528  78 LPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPglgLLLIEAILGYDYPEIQGP-V 156

                         170       180
                  ....*....|....*....|...
gi 446502462  231 NALATILLVLSLVMVIASQLIAR 253
Cdd:pfam00528 157 LAAALILLLLNLLVDILQRLLDP 179
TauC COG0600
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ...
 50-210 4.13e-11

ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440365 [Multi-domain]  Cd Length: 254  Bit Score: 61.32  E-value: 4.13e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  50 LMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFrgkpfVSGML--FVVMMSPdiVMAISLLVLFMLLgIQLG 127
Cdd:COG0600   53 LLASGELWEHLLASLLRVLLGFALAALLGVPLGLLLGLSRL-----LRRLLdpLLVFLRP--IPPLALAPLLILW-FGIG 124

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 128 FWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVT 207
Cdd:COG0600  125 EASKIFVIFLGAFFPILLNTAAGVRSVDPELLELARSLGASRWQILRKVVLPAALPYIFTGLRIALGLAWIGLVVAELLG 204


                 ...
gi 446502462 208 GPS 210
Cdd:COG0600  205 ASS 207
cysT CHL00187
sulfate transport protein; Provisional
 63-197 4.81e-11

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 61.18  E-value: 4.81e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  63 SLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLV----------LFMLLGIQLGFWSL- 131
Cdd:CHL00187  60 TLSMALIAALINGFFGLLIAWVLVRYNFPGKRLLDAAVDLPFALPTSVAGLTLATvygdngwighLLSHLGIQIVFTKLg 139

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446502462 132 -LFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSM 197
Cdd:CHL00187 140 vLLAMIFVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAI 206
YnjC COG4135
ABC-type uncharacterized transport system YnjBCD, permease component [General function ...
 54-196 4.88e-11

ABC-type uncharacterized transport system YnjBCD, permease component [General function prediction only];


Pssm-ID: 443310 [Multi-domain]  Cd Length: 564  Bit Score: 62.58  E-value: 4.88e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  54 DSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLF 133
Cdd:COG4135  352 PGLLEPLGNTLLLALASALIALVLVLACLEAEARRGRRPGRRALWLLYLPLLVPQIAFLFGLQVLLLRLGLDGTWLAVIW 431

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446502462 134 SHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLS 196
Cdd:COG4135  432 AHLVFVLPYVFLSLAGPWRALDPRYAQVAASLGASPWRVFWRVKLPLLLRPILTAAAVGFAVS 494
COG4132 COG4132
ABC-type uncharacterized transport system, permease component [General function prediction ...
 51-253 1.01e-10

ABC-type uncharacterized transport system, permease component [General function prediction only];


Pssm-ID: 443307 [Multi-domain]  Cd Length: 286  Bit Score: 60.59  E-value: 1.01e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  51 MNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRG-KPFV---SGML-----------FVVMMSPDIVmaisL 115
Cdd:COG4132   56 LTSPFYLQAFWNSIWLSLASALIGAVIGLLLAYALRRGGPGWlRRAVlafSGVAsnfagvplafaFIATLGRNGL----V 131

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 116 LVLFMLLGIQL-------GFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAG 188
Cdd:COG4132  132 TLLLKQLGIDLydgfnlySFWGLILVYLYFQIPLMVLLLYPALDGLRREWREAAALLGASRWQYWRRVALPVLAPSLLGT 211

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 446502462 189 WVLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVN---ALATILLVLSLVMVIASQLIAR 253
Cdd:COG4132  212 FLLLFANAFGAYATAYALTGGNYNLVPIRIGALISGDVLLDPNlgaALALGMIVIMALVMALYQWLQR 279
OpuBB COG1174
ABC-type proline/glycine betaine transport system, permease component [Amino acid transport ...
 46-188 6.58e-09

ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism];


Pssm-ID: 440787 [Multi-domain]  Cd Length: 212  Bit Score: 54.68  E-value: 6.58e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  46 WYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRfRGKPFVSGMLFVVMMSPdivmAISLLVLFMLLgIQ 125
Cdd:COG1174    6 IEWLADNRDGILALLLEHLLLVLLALLIALLIAVPLGILITRRR-RLAGLVLGVANILQTIP----SLALLALLIPL-LG 79

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446502462 126 LGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAG 188
Cdd:COG1174   80 IGPAPAIIALVLYALLPILRNTYTGLRSVDPAVVEAARGMGMTPWQRLWRVELPLALPVILAG 142
potB PRK09497
spermidine/putrescine ABC transporter membrane protein; Reviewed
 140-208 1.80e-08

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 181910  Cd Length: 285  Bit Score: 53.92  E-value: 1.80e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446502462 140 LPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTG 208
Cdd:PRK09497 162 LPFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLPAMGMFYVSDLLGG 230
malG PRK10998
maltose ABC transporter permease MalG;
63-204 2.14e-07

maltose ABC transporter permease MalG;


Pssm-ID: 182891  Cd Length: 296  Bit Score: 50.86  E-value: 2.14e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  63 SLTMAVFSATFATLIGSLTAVALYRYRFRGK-PFVSGMLfVVMMSPDIVMAISLLVLFMLLGIQLGFWSLlFSHITFCLP 141
Cdd:PRK10998  88 SVKVAGITAIGIVALSTTCAYAFARMRFKGKaTLLKGML-IFQMFPAVLSLVALYALFDRLGQYIPFIGL-NTHGGVIFA 165

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 446502462 142 FV------VVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSS 204
Cdd:PRK10998 166 YLggialhVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVAS 234
DppC COG1173
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ...
 56-193 5.11e-05

ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];


Pssm-ID: 440786 [Multi-domain]  Cd Length: 275  Bit Score: 43.56  E-value: 5.11e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  56 LLQAAQHSLTMAVFSATFATLIGS-LTAVALYryrFRGKpfVSGmlfVVMMSPDIVMAISLLVLFMLLGIQLG--FWSLL 132
Cdd:COG1173   74 LLYGARISLLVGLLAVLIALVIGVlLGLLAGY---FGGW--VDA---VLMRLVDVLLAFPSLLLAIALVAVLGpgLLNVI 145

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 446502462 133 FShitfcLPFVVVTVYSRLkgfdVR--ML--------EAAKDLGASEFTILRKIILPLAMPAVAAGWVLSF 193
Cdd:COG1173  146 LA-----LGLTGWPGYARL----VRaqVLslrereyvEAARALGASPLRIIFRHILPNVLPPLIVQATLGI 207
MetP COG2011
ABC-type methionine transport system, permease component [Amino acid transport and metabolism]; ...
 54-195 8.08e-05

ABC-type methionine transport system, permease component [Amino acid transport and metabolism];


Pssm-ID: 441614  Cd Length: 220  Bit Score: 42.74  E-value: 8.08e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  54 DSLLQAAQHSLTMAVFSATFATLIGSLTAVALY---RYRFRGKPFVSGML-FVVMMS---PDIVMAISLLVL-FMLLGIQ 125
Cdd:COG2011   10 PLLLQATGETLYMVGVSTLIAVLLGLPLGVLLVltrPGGLLPNPVLYRVLgVIVNIFrsiPFIILLVALIPLtRLIVGTS 89

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 126 LGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVaagwVLSFTL 195
Cdd:COG2011   90 IGTTAAIVPLTIAAIPFFARLVENALREVDPGVIEAAQAMGASPWQIIFKVLLPEALPSL----ILGLTV 155
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 36-257 1.29e-04

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 42.22  E-value: 1.29e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462   36 GINWQGFTtKWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRfRGKPFVSGMLFVV-MMS--PDIVMA 112
Cdd:TIGR00974  33 ALNLEFFT-KSPTPTGAEGGIGPAIVGTLLLTLLAIVIAVPLGIGAAIYLAEYA-NGSRFTKIIRFAVdILAgvPSIVVG 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  113 ISLLVLFMLLGIQLGFwSLLFSHITFC---LPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGW 189
Cdd:TIGR00974 111 LFGYGFFVLTYLGGGF-SLLAGALALAlliLPVIIRTTEEALKAVPKDLREASLALGATKWQTIFKVVLPAALPGILTGI 189

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  190 VLSFT--------LSMDDVVVSSFVTGPSYEI--LPLKIYSMVKVGVSPEVN----ALATILLVLSLVMVIASQLIARDK 255
Cdd:TIGR00974 190 ILSIAraagetapLLFTAGGSAFTPPNLFDPFatLPVLIYNLASEGPYVEAQqlawAAALVLIVLVLLLNLIARLLRRRF 269


                  ..
gi 446502462  256 TK 257
Cdd:TIGR00974 270 KK 271
PRK10683 PRK10683
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
 140-209 2.29e-04

putrescine transporter subunit: membrane component of ABC superfamily; Provisional


Pssm-ID: 182646  Cd Length: 317  Bit Score: 41.62  E-value: 2.29e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 140 LPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGP 209
Cdd:PRK10683 196 LPFMVLPIYTALTRIDYSLVEAALDLGARPLKTFFSVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGP 265
thiP PRK09433
thiamine transporter membrane protein; Reviewed
 35-260 4.42e-04

thiamine transporter membrane protein; Reviewed


Pssm-ID: 181853 [Multi-domain]  Cd Length: 525  Bit Score: 41.36  E-value: 4.42e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  35 FGINWQGFTTKWYSLlMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAIS 114
Cdd:PRK09433  22 LALWLHAPGGDWDAV-WQDSYLWHVLRFSFWQAFLSALLSVLPAIPLARALYRRRFPGRGLLLRLCAMTLVLPVLVAVFG 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 115 LLV----------LFMLLGIQLGF-----WSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILP 179
Cdd:PRK09433 101 LLSvygrsgwlaqLLQALGLEWPFsiyglQGILLAHVFFNLPLATRLLLQALESIPAEQRQLAAQLGMRGWQFFRLVEWP 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 180 L---AMPAVAAgwvLSFTLsmddvVVSSFVT------GPSYEILPLKIYSMVKVGVSP-EVNALATILLVLSLVMVIASQ 249
Cdd:PRK09433 181 YlrrQLPPVAA---LIFML-----CFTSFATvltlggGPKATTIELAIYQALSFDFDLaRAALLALLQMVLCLGLVLLSQ 252

                        250
                 ....*....|.
gi 446502462 250 LIARDKTKGNT 260
Cdd:PRK09433 253 RLSKAIAVGAT 263
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 63-188 5.99e-04

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 39.84  E-value: 5.99e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  63 SLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAislLVLFMLLGIQ--LGFWSLLFS------ 134
Cdd:NF038017   1 SLRVSGTATLIAALIGIPLGALLALRRFPGRRLVISLLNTLMGLPPVVVG---LIVYLLLSRSgpLGFLGLLYTptamii 77

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 446502462 135 -HITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASE----FTILRKIILPLaMPAVAAG 188
Cdd:NF038017  78 aQAVLALPIVAGLTLAAVQGLDPELRLQILSLGATRwqalWTLLKEARFAL-LAAVLAG 135
thiP PRK09433
thiamine transporter membrane protein; Reviewed
 53-247 9.29e-04

thiamine transporter membrane protein; Reviewed


Pssm-ID: 181853 [Multi-domain]  Cd Length: 525  Bit Score: 40.20  E-value: 9.29e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  53 NDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPF------VSGMLFVVMmsPDIVMAISLLVLF--MLLGI 124
Cdd:PRK09433 314 QPALWQALWTSLRIALAAALLAVVLTMMLLWSSRELRLRQRKLaaqaleLSGMLILAM--PGIVLATGLFLLLrnTTDLP 391

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462 125 QLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSS 204
Cdd:PRK09433 392 ASALGIVILTNALMALPYALRVLEPPMRDIAARYGRLCQSLGIRGWSRLRLIELRALRRPLAQAFAFACALSLGDFGVIA 471

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 446502462 205 FVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIA 247
Cdd:PRK09433 472 LFGSQDFRTLPFLLYQQLGSYRSQDAAVTALLLLLLCLLLFTL 514
PRK10952 PRK10952
proline/glycine betaine ABC transporter permease ProW;
63-206 1.51e-03

proline/glycine betaine ABC transporter permease ProW;


Pssm-ID: 236805  Cd Length: 355  Bit Score: 39.30  E-value: 1.51e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  63 SLTMAVFSATFATLIGSLTAVALYRYRfRGKPFVSGMLFVVMMSPDIVMaisLLVLFMLLGIqlGFWSLLFSHITFCLPF 142
Cdd:PRK10952 149 TLALVLTALLFCIVIGLPLGIWLARSP-RAAKIIRPLLDAMQTTPAFVY---LVPIVMLFGI--GNVPGVVVTIIFALPP 222

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 446502462 143 VVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFV 206
Cdd:PRK10952 223 IVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMI 286
HisM COG0765
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; ...
 46-190 4.48e-03

ABC-type amino acid transport system, permease component [Amino acid transport and metabolism];


Pssm-ID: 440528 [Multi-domain]  Cd Length: 218  Bit Score: 37.36  E-value: 4.48e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  46 WYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVAlyryRFRGKPFVSGMLFVVMmspDIVMAISLLVLFML---- 121
Cdd:COG0765    5 FSVLLDYLPLLLEGLLVTLLLTVLAIVLGLVLGLLLALA----RLSPNPVLRWLATAYV---EFFRGTPLLVQLFFiyfg 77

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 446502462 122 ---LGIQLG-FWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWV 190
Cdd:COG0765   78 lplLGIDLSpFVAAVIALTLNSAAYLAEIVRAGIQSVPKGQWEAARALGLSRWQTMRRIILPQALRIILPPLG 150
phosphate_pstC TIGR02138
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ...
 140-253 4.59e-03

phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273992 [Multi-domain]  Cd Length: 295  Bit Score: 37.63  E-value: 4.59e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  140 LPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKIY 219
Cdd:TIGR02138 163 LPTIASISRDALRAVPRSYKEASYALGATKWETIRRVILPAARSGIVGAVVLGLGRALGETMAVTMVIGNVFPISPLSLF 242

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 446502462  220 SMVK-------------VGVSPEVNAL---ATILLVLSLVMVIASQLIAR 253
Cdd:TIGR02138 243 DPGTtitslianqfgeaSGGSVHTSALfalGLVLFVITLLVNILARYIVR 292
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 42-253 6.35e-03

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 37.74  E-value: 6.35e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462   42 FTTKWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGK--PFVSGMLFVVMMSPDIVMAISLLVLF 119
Cdd:TIGR03262 316 LTLKHYNFDLMDGGGWEAYKNSLRLAATTALIGTILVFGGAYLIEKTRGFGLlrGVLRFLAILPMAVPGLVLGLGYIFFF 395

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446502462  120 -----MLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFT 194
Cdd:TIGR03262 396 naptnPLNGLYGTMALLVLCTVVHFYTVSHLTAVTALKQIDSEFEAVSASLKVPFYKTFLRVTLPVCLPAILDIARYLFV 475

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 446502462  195 LSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIASQLIAR 253
Cdd:TIGR03262 476 NSMTTVSAVVFLYSPDTKLASVAILNMDDAGDIAPAAAMATLIVLTSAVAKLLFALASR 534
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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