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Concise Results
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Full Results
MULTISPECIES: glycine betaine transporter OpuD [Bacillus]
Protein Classification
BCCT family transporter ( domain architecture ID 10003438 )
BCCT (betaine-carnitine-choline transporter) family transporter shares the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]; energized by pmf-driven proton symport; similar to Bacillus subtilis glycine betaine transporter OpuD
List of domain hits
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
3-499
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 608.68
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 3 K KENS VF YI S I LL TTL F II WG IT - P AS wiqgyd LQS V TSSLN S F I LNK FGWFY S LL MTAMIILAA YLAFSKYG S IRLG K D 81
Cdd:COG1292 12 K IDPP VF IP S A LL ILA F VL WG LL f P EA ------ AGA V LNAAF S W I TTN FGWFY L LL VLLFVVFCL YLAFSKYG K IRLG G D 85
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 82 GE KP KY S YP SW LS MLF G AGMGIGL L F Y G I AEP IS HF TD P LT G - KA G TE E S A KL AM Q Y S FFHWGL FP W SL YA M V A L TI AYF 160
Cdd:COG1292 86 DA KP EF S TF SW FA MLF S AGMGIGL V F W G V AEP LY HF LS P PP G v EP G SP E A A RW AM A Y T FFHWGL HA W AI YA L V G L AL AYF 165
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 161 TF R KQKGS TI GATVT PL FNRSKNS PIGK TV DILAV L ATVFG IVP S V G I GA Q QI AG GL S YLF p S I H N T L FT Q L I L IA IFAV 240
Cdd:COG1292 166 AY R RGLPL TI SSALY PL LGDRIYG PIGK VI DILAV F ATVFG VAT S L G L GA L QI NA GL N YLF - G I P N S L TV Q I I I IA VITA 244
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 241 L YLT SA QT GLD R GIK Y LSNLN FS LA GI LL ISF L LL GPT V FI MKY F TST LG S Y IGALPS M G L NLG A FNE ks SS W IEN WT I F 320
Cdd:COG1292 245 L FTI SA VS GLD K GIK R LSNLN MV LA LL LL LFV L IV GPT L FI LNL F VQS LG D Y LQNFVP M S L WTD A YGD -- TG W LGG WT V F 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 321 YW G WWI S W S PFVG T FIARIS K GRTI K EF IF GV V LVPTL ICTF WF A VFGGTAIH M E MFQSLGI A d E IAKN G T E IG LFA VIS 400
Cdd:COG1292 323 YW A WWI A W A PFVG L FIARIS R GRTI R EF VL GV L LVPTL FTFL WF S VFGGTAIH L E LNGGGDL A - E AVAA G V E AA LFA LLE 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 401 H LP FS T F L TIIGL ILV AT FFVTSADS ATF V VS M Q TS N G SLS P KNSLKLI WG LT I AII AA I LL Q AGGL N ALQ I A A II A ALP 480
Cdd:COG1292 402 Q LP LG T I L SVLAI ILV II FFVTSADS GSL V LA M L TS G G DEE P PRWQRIF WG VL I GLV AA V LL L AGGL S ALQ T A S II T ALP 481
490
....*....|....*....
gi 446514237 481 FS I V VV LM VT SL F K E LR KE 499
Cdd:COG1292 482 FS F V LL LM CV SL V K A LR ED 500
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
3-499
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 608.68
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 3 K KENS VF YI S I LL TTL F II WG IT - P AS wiqgyd LQS V TSSLN S F I LNK FGWFY S LL MTAMIILAA YLAFSKYG S IRLG K D 81
Cdd:COG1292 12 K IDPP VF IP S A LL ILA F VL WG LL f P EA ------ AGA V LNAAF S W I TTN FGWFY L LL VLLFVVFCL YLAFSKYG K IRLG G D 85
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 82 GE KP KY S YP SW LS MLF G AGMGIGL L F Y G I AEP IS HF TD P LT G - KA G TE E S A KL AM Q Y S FFHWGL FP W SL YA M V A L TI AYF 160
Cdd:COG1292 86 DA KP EF S TF SW FA MLF S AGMGIGL V F W G V AEP LY HF LS P PP G v EP G SP E A A RW AM A Y T FFHWGL HA W AI YA L V G L AL AYF 165
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 161 TF R KQKGS TI GATVT PL FNRSKNS PIGK TV DILAV L ATVFG IVP S V G I GA Q QI AG GL S YLF p S I H N T L FT Q L I L IA IFAV 240
Cdd:COG1292 166 AY R RGLPL TI SSALY PL LGDRIYG PIGK VI DILAV F ATVFG VAT S L G L GA L QI NA GL N YLF - G I P N S L TV Q I I I IA VITA 244
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 241 L YLT SA QT GLD R GIK Y LSNLN FS LA GI LL ISF L LL GPT V FI MKY F TST LG S Y IGALPS M G L NLG A FNE ks SS W IEN WT I F 320
Cdd:COG1292 245 L FTI SA VS GLD K GIK R LSNLN MV LA LL LL LFV L IV GPT L FI LNL F VQS LG D Y LQNFVP M S L WTD A YGD -- TG W LGG WT V F 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 321 YW G WWI S W S PFVG T FIARIS K GRTI K EF IF GV V LVPTL ICTF WF A VFGGTAIH M E MFQSLGI A d E IAKN G T E IG LFA VIS 400
Cdd:COG1292 323 YW A WWI A W A PFVG L FIARIS R GRTI R EF VL GV L LVPTL FTFL WF S VFGGTAIH L E LNGGGDL A - E AVAA G V E AA LFA LLE 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 401 H LP FS T F L TIIGL ILV AT FFVTSADS ATF V VS M Q TS N G SLS P KNSLKLI WG LT I AII AA I LL Q AGGL N ALQ I A A II A ALP 480
Cdd:COG1292 402 Q LP LG T I L SVLAI ILV II FFVTSADS GSL V LA M L TS G G DEE P PRWQRIF WG VL I GLV AA V LL L AGGL S ALQ T A S II T ALP 481
490
....*....|....*....
gi 446514237 481 FS I V VV LM VT SL F K E LR KE 499
Cdd:COG1292 482 FS F V LL LM CV SL V K A LR ED 500
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
8-499
0e+00
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 594.52
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 8 VF YI S IL L TTL F IIW G I tpasw I QGYD L QS V TSSLNSF I LNK FGWFY S LL MTAMIIL A AY LAFS K YG S IRLG K D GE KP KY 87
Cdd:pfam02028 1 VF AV S AG L ILA F VLL G L ----- I FPEA L SA V VNTALDW I TDN FGWFY L LL VLIFLVF A LF LAFS R YG N IRLG G D DD KP EF 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 88 S YP SW LS MLF G AGMGIGL L F Y G I AEP I SH FTD - P LT G KA GT E E S A KL AM Q Y S FFHWGL FP W SL YA M VAL TI AYF TF RK QK 166
Cdd:pfam02028 76 S TF SW FA MLF A AGMGIGL V F W G V AEP L SH YLS p P PG G EP GT P E A A QQ AM A Y T FFHWGL HA W AI YA L VAL AL AYF AY RK GL 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 167 GST I GATVT PL FNRSKNS PIGK TV DILA VL ATVFG IVP S V G I GA Q QI AG GLSYLF p S I H NTL F TQL IL IAI FAV L YLT SA 246
Cdd:pfam02028 156 PLL I SSALY PL LGDRIDG PIGK AI DILA II ATVFG VAT S L G L GA L QI NA GLSYLF - G I P NTL T TQL AI IAI ITA L FTI SA 234
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 247 QT GLD R GIK Y LSNLN FS LA GI LL ISF L LL GPT V FI MKY F TST LG S Y IGALPS M GLNLGA F n EKSSS W IEN WTIFYW G WWI 326
Cdd:pfam02028 235 VS GLD K GIK R LSNLN MY LA VA LL LFV L IA GPT L FI LNT F VQS LG D Y LQNFVP M SFYTDP F - GDTGG W LGG WTIFYW A WWI 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 327 S W S PFVG T FIARIS K GRTI K EFI F GV V LVPTL ICTF WF A VFGGTAI HM E MFQSLGI AD e IAKN G TEIG LFA VISH LP FS T 406
Cdd:pfam02028 314 A W A PFVG M FIARIS R GRTI R EFI L GV L LVPTL FTFL WF S VFGGTAI YL E LNGPGDL AD - AVEA G PPAA LFA LLEQ LP LG T 392
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 407 F L TIIG L I L VAT FFVTSADS A T F V VS M QT S N G S L S P KNSLKLI WG LTIAII AA I LL Q AGGL N ALQ I A A IIAALPFS IVVV 486
Cdd:pfam02028 393 I L SVLA L L L III FFVTSADS G T L V IA M LS S G G D L N P PRWQRVF WG VLLGAV AA V LL L AGGL E ALQ S A S IIAALPFS FILL 472
490
....*....|...
gi 446514237 487 LM VT SLFK E LR K E 499
Cdd:pfam02028 473 LM CI SLFK A LR E E 485
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
51-499
1.18e-140
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 412.90
E-value: 1.18e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 51 GW F Y S L LM T AMIILAA Y L AFS K YG S IRLG K D G EKP KY S YP SWL S MLF G AGMG I GL L F Y G I AEP ISHFTD P LT G KAG T EES 130
Cdd:TIGR00842 1 GW A Y I L TV T LFLGFVL Y I AFS R YG K IRLG R D D EKP EF S TL SWL A MLF A AGMG A GL M F W G V AEP LTYYLT P PF G AGP T STT 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 131 A K - L A MQ Y SF FHWG LF PW SL YA M V A L TI AYF T FRK QKGSTIGATVT PL FNRSK N S PIGK TV DILA VL ATVFG IVP S V G I G 209
Cdd:TIGR00842 81 A Q e Q A LA Y TL FHWG IH PW AI YA L V G L AL AYF H FRK GLPLRLSSALV PL LGEKV N G PIGK AI DILA LV ATVFG VAT S L G L G 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 210 A Q QI AG GLS Y LF p S I HNTLFT Q LIL I AIFAV L YLT S AQT G LDR GIK Y LSN L N FS LA GI LL ISF L LL GPTVF IMKY F TSTL 289
Cdd:TIGR00842 161 A P QI NA GLS A LF - G I PDSFWL Q ALI I LCVTA L ACI S VAS G VGK GIK I LSN I N MA LA FL LL LFV L IV GPTVF LLNS F VDSI 239
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 290 G S Y IGAL P S M GLNLGAFNE K SS s W IEN WT I FYW G WWISWSPFVG T FIARIS K GRTI K EFIFGV V L V PT LICTF WF A VFG G 369
Cdd:TIGR00842 240 G N Y LQNF P Q M SFRTDPDDG K GG - W PGG WT V FYW A WWISWSPFVG M FIARIS R GRTI R EFIFGV L L G PT AFTWL WF S VFG N 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 370 T A IHMEMFQSLGIADEIAKNGTEIG LF AVISH LP FS T FLTIIG LIL VAT FF V TSADSA TF V V - SMQTSN G S L -- S P KNSL 446
Cdd:TIGR00842 319 S A LLLQQNGGFINGPFVVETNGARA LF GLLAA LP LG T ITMALA LIL III FF I TSADSA SL V L a NTTSRG G Q L ge E P PKWV 398
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 446514237 447 KLI W GLT I AI IA AI LL QA GG - L N ALQ IAA IIAALPFS I V VVLMVT SL F K E L RKE 499
Cdd:TIGR00842 399 RVF W AVA I GL IA LV LL FS GG s L A ALQ TTT IIAALPFS F V MLVVMF SL I K D L KQD 452
PRK09928
PRK09928 choline transport protein BetT; Provisional
8-500
7.99e-133
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 400.61
E-value: 7.99e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 8 VFY I S IL L TT LF IIWG I ---- TPAS WI qgydlqsv TSS LN s FILNK FGW F Y S L LM T AM I ILAAYL A F S KY GSI R LG KDGE 83
Cdd:PRK09928 19 VFY T S AG L IL LF SLTT I lftd FSNR WI -------- NRT LN - WVSKT FGW Y Y L L AA T LY I VFVIFI A C S RF GSI K LG PEQS 89
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 84 KP KY S YP SW LS MLF G AG M GI G L L F YGI AEP ISHFTD P LT G KAG T E E S A KL AM QYSF FH W GL FP WS L YA MVALTIA YF TF R 163
Cdd:PRK09928 90 KP EF S LL SW AA MLF A AG I GI D L M F FSV AEP VTQYMQ P PE G AGQ T I E A A RQ AM VWTL FH Y GL TG WS M YA LMGMALG YF SY R 169
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 164 KQKGS TI GATVT P L F NRSK N S PIG KT VDI L AV LA T V FGI VPSV GIG AQ Q IAG GLS Y LF p S I HNT L FT Q LI LIA IFAVLYL 243
Cdd:PRK09928 170 YNLPL TI RSALY P I F GKRI N G PIG HS VDI A AV IG T I FGI ATTL GIG VV Q LNY GLS V LF - D I PES L AA Q AA LIA LSVIIAT 248
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 244 T S AQT G LDR GI KY LS N LN FS LA GI L LISF L LL G P T V F IMKYFTSTL G S Y IGALPS M G LN LG AF n EKSSS W IE NWT I F Y W G 323
Cdd:PRK09928 249 I S VTS G VNK GI RV LS E LN VL LA LG L ILFV L FM G D T S F LLNALVLNV G D Y VNRFMG M T LN SF AF - DRPTE W MN NWT L F F W A 327
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 324 WW IS WSPFVG T F I ARIS K GRTI KE F IF G VVLV P TLICTF W FAV FG GT A IHMEMFQSLGI A D E IAKN g T E I G LFAVISHL P 403
Cdd:PRK09928 328 WW VA WSPFVG L F L ARIS R GRTI RQ F VL G TLII P FTFTLL W LSI FG NS A LYEIIHGNAAF A E E AMAH - P E R G FYSLLAQY P 406
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 404 FS TF LTIIGL I LVAT F F VTSADS ATF V VSMQ TS N gs L SPK NS ----- L KLI W GLT I AIIAAIL L QAG G LN ALQ IAAI I AA 478
Cdd:PRK09928 407 AF TF SASVAT I TGLL F Y VTSADS GAL V LGNF TS K -- L KDI NS dapnw L RVF W SVA I GLLTLGM L MTN G IS ALQ NTTV I MG 484
490 500
....*....|....*....|..
gi 446514237 479 LPFS I V VVLMVTS L F K E L RK ED 500
Cdd:PRK09928 485 LPFS F V IFFVMAG L Y K S L KV ED 506
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
3-499
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 608.68
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 3 K KENS VF YI S I LL TTL F II WG IT - P AS wiqgyd LQS V TSSLN S F I LNK FGWFY S LL MTAMIILAA YLAFSKYG S IRLG K D 81
Cdd:COG1292 12 K IDPP VF IP S A LL ILA F VL WG LL f P EA ------ AGA V LNAAF S W I TTN FGWFY L LL VLLFVVFCL YLAFSKYG K IRLG G D 85
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 82 GE KP KY S YP SW LS MLF G AGMGIGL L F Y G I AEP IS HF TD P LT G - KA G TE E S A KL AM Q Y S FFHWGL FP W SL YA M V A L TI AYF 160
Cdd:COG1292 86 DA KP EF S TF SW FA MLF S AGMGIGL V F W G V AEP LY HF LS P PP G v EP G SP E A A RW AM A Y T FFHWGL HA W AI YA L V G L AL AYF 165
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 161 TF R KQKGS TI GATVT PL FNRSKNS PIGK TV DILAV L ATVFG IVP S V G I GA Q QI AG GL S YLF p S I H N T L FT Q L I L IA IFAV 240
Cdd:COG1292 166 AY R RGLPL TI SSALY PL LGDRIYG PIGK VI DILAV F ATVFG VAT S L G L GA L QI NA GL N YLF - G I P N S L TV Q I I I IA VITA 244
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 241 L YLT SA QT GLD R GIK Y LSNLN FS LA GI LL ISF L LL GPT V FI MKY F TST LG S Y IGALPS M G L NLG A FNE ks SS W IEN WT I F 320
Cdd:COG1292 245 L FTI SA VS GLD K GIK R LSNLN MV LA LL LL LFV L IV GPT L FI LNL F VQS LG D Y LQNFVP M S L WTD A YGD -- TG W LGG WT V F 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 321 YW G WWI S W S PFVG T FIARIS K GRTI K EF IF GV V LVPTL ICTF WF A VFGGTAIH M E MFQSLGI A d E IAKN G T E IG LFA VIS 400
Cdd:COG1292 323 YW A WWI A W A PFVG L FIARIS R GRTI R EF VL GV L LVPTL FTFL WF S VFGGTAIH L E LNGGGDL A - E AVAA G V E AA LFA LLE 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 401 H LP FS T F L TIIGL ILV AT FFVTSADS ATF V VS M Q TS N G SLS P KNSLKLI WG LT I AII AA I LL Q AGGL N ALQ I A A II A ALP 480
Cdd:COG1292 402 Q LP LG T I L SVLAI ILV II FFVTSADS GSL V LA M L TS G G DEE P PRWQRIF WG VL I GLV AA V LL L AGGL S ALQ T A S II T ALP 481
490
....*....|....*....
gi 446514237 481 FS I V VV LM VT SL F K E LR KE 499
Cdd:COG1292 482 FS F V LL LM CV SL V K A LR ED 500
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
8-499
0e+00
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 594.52
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 8 VF YI S IL L TTL F IIW G I tpasw I QGYD L QS V TSSLNSF I LNK FGWFY S LL MTAMIIL A AY LAFS K YG S IRLG K D GE KP KY 87
Cdd:pfam02028 1 VF AV S AG L ILA F VLL G L ----- I FPEA L SA V VNTALDW I TDN FGWFY L LL VLIFLVF A LF LAFS R YG N IRLG G D DD KP EF 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 88 S YP SW LS MLF G AGMGIGL L F Y G I AEP I SH FTD - P LT G KA GT E E S A KL AM Q Y S FFHWGL FP W SL YA M VAL TI AYF TF RK QK 166
Cdd:pfam02028 76 S TF SW FA MLF A AGMGIGL V F W G V AEP L SH YLS p P PG G EP GT P E A A QQ AM A Y T FFHWGL HA W AI YA L VAL AL AYF AY RK GL 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 167 GST I GATVT PL FNRSKNS PIGK TV DILA VL ATVFG IVP S V G I GA Q QI AG GLSYLF p S I H NTL F TQL IL IAI FAV L YLT SA 246
Cdd:pfam02028 156 PLL I SSALY PL LGDRIDG PIGK AI DILA II ATVFG VAT S L G L GA L QI NA GLSYLF - G I P NTL T TQL AI IAI ITA L FTI SA 234
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 247 QT GLD R GIK Y LSNLN FS LA GI LL ISF L LL GPT V FI MKY F TST LG S Y IGALPS M GLNLGA F n EKSSS W IEN WTIFYW G WWI 326
Cdd:pfam02028 235 VS GLD K GIK R LSNLN MY LA VA LL LFV L IA GPT L FI LNT F VQS LG D Y LQNFVP M SFYTDP F - GDTGG W LGG WTIFYW A WWI 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 327 S W S PFVG T FIARIS K GRTI K EFI F GV V LVPTL ICTF WF A VFGGTAI HM E MFQSLGI AD e IAKN G TEIG LFA VISH LP FS T 406
Cdd:pfam02028 314 A W A PFVG M FIARIS R GRTI R EFI L GV L LVPTL FTFL WF S VFGGTAI YL E LNGPGDL AD - AVEA G PPAA LFA LLEQ LP LG T 392
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 407 F L TIIG L I L VAT FFVTSADS A T F V VS M QT S N G S L S P KNSLKLI WG LTIAII AA I LL Q AGGL N ALQ I A A IIAALPFS IVVV 486
Cdd:pfam02028 393 I L SVLA L L L III FFVTSADS G T L V IA M LS S G G D L N P PRWQRVF WG VLLGAV AA V LL L AGGL E ALQ S A S IIAALPFS FILL 472
490
....*....|...
gi 446514237 487 LM VT SLFK E LR K E 499
Cdd:pfam02028 473 LM CI SLFK A LR E E 485
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
51-499
1.18e-140
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 412.90
E-value: 1.18e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 51 GW F Y S L LM T AMIILAA Y L AFS K YG S IRLG K D G EKP KY S YP SWL S MLF G AGMG I GL L F Y G I AEP ISHFTD P LT G KAG T EES 130
Cdd:TIGR00842 1 GW A Y I L TV T LFLGFVL Y I AFS R YG K IRLG R D D EKP EF S TL SWL A MLF A AGMG A GL M F W G V AEP LTYYLT P PF G AGP T STT 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 131 A K - L A MQ Y SF FHWG LF PW SL YA M V A L TI AYF T FRK QKGSTIGATVT PL FNRSK N S PIGK TV DILA VL ATVFG IVP S V G I G 209
Cdd:TIGR00842 81 A Q e Q A LA Y TL FHWG IH PW AI YA L V G L AL AYF H FRK GLPLRLSSALV PL LGEKV N G PIGK AI DILA LV ATVFG VAT S L G L G 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 210 A Q QI AG GLS Y LF p S I HNTLFT Q LIL I AIFAV L YLT S AQT G LDR GIK Y LSN L N FS LA GI LL ISF L LL GPTVF IMKY F TSTL 289
Cdd:TIGR00842 161 A P QI NA GLS A LF - G I PDSFWL Q ALI I LCVTA L ACI S VAS G VGK GIK I LSN I N MA LA FL LL LFV L IV GPTVF LLNS F VDSI 239
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 290 G S Y IGAL P S M GLNLGAFNE K SS s W IEN WT I FYW G WWISWSPFVG T FIARIS K GRTI K EFIFGV V L V PT LICTF WF A VFG G 369
Cdd:TIGR00842 240 G N Y LQNF P Q M SFRTDPDDG K GG - W PGG WT V FYW A WWISWSPFVG M FIARIS R GRTI R EFIFGV L L G PT AFTWL WF S VFG N 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 370 T A IHMEMFQSLGIADEIAKNGTEIG LF AVISH LP FS T FLTIIG LIL VAT FF V TSADSA TF V V - SMQTSN G S L -- S P KNSL 446
Cdd:TIGR00842 319 S A LLLQQNGGFINGPFVVETNGARA LF GLLAA LP LG T ITMALA LIL III FF I TSADSA SL V L a NTTSRG G Q L ge E P PKWV 398
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 446514237 447 KLI W GLT I AI IA AI LL QA GG - L N ALQ IAA IIAALPFS I V VVLMVT SL F K E L RKE 499
Cdd:TIGR00842 399 RVF W AVA I GL IA LV LL FS GG s L A ALQ TTT IIAALPFS F V MLVVMF SL I K D L KQD 452
PRK09928
PRK09928 choline transport protein BetT; Provisional
8-500
7.99e-133
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 400.61
E-value: 7.99e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 8 VFY I S IL L TT LF IIWG I ---- TPAS WI qgydlqsv TSS LN s FILNK FGW F Y S L LM T AM I ILAAYL A F S KY GSI R LG KDGE 83
Cdd:PRK09928 19 VFY T S AG L IL LF SLTT I lftd FSNR WI -------- NRT LN - WVSKT FGW Y Y L L AA T LY I VFVIFI A C S RF GSI K LG PEQS 89
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 84 KP KY S YP SW LS MLF G AG M GI G L L F YGI AEP ISHFTD P LT G KAG T E E S A KL AM QYSF FH W GL FP WS L YA MVALTIA YF TF R 163
Cdd:PRK09928 90 KP EF S LL SW AA MLF A AG I GI D L M F FSV AEP VTQYMQ P PE G AGQ T I E A A RQ AM VWTL FH Y GL TG WS M YA LMGMALG YF SY R 169
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 164 KQKGS TI GATVT P L F NRSK N S PIG KT VDI L AV LA T V FGI VPSV GIG AQ Q IAG GLS Y LF p S I HNT L FT Q LI LIA IFAVLYL 243
Cdd:PRK09928 170 YNLPL TI RSALY P I F GKRI N G PIG HS VDI A AV IG T I FGI ATTL GIG VV Q LNY GLS V LF - D I PES L AA Q AA LIA LSVIIAT 248
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 244 T S AQT G LDR GI KY LS N LN FS LA GI L LISF L LL G P T V F IMKYFTSTL G S Y IGALPS M G LN LG AF n EKSSS W IE NWT I F Y W G 323
Cdd:PRK09928 249 I S VTS G VNK GI RV LS E LN VL LA LG L ILFV L FM G D T S F LLNALVLNV G D Y VNRFMG M T LN SF AF - DRPTE W MN NWT L F F W A 327
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 324 WW IS WSPFVG T F I ARIS K GRTI KE F IF G VVLV P TLICTF W FAV FG GT A IHMEMFQSLGI A D E IAKN g T E I G LFAVISHL P 403
Cdd:PRK09928 328 WW VA WSPFVG L F L ARIS R GRTI RQ F VL G TLII P FTFTLL W LSI FG NS A LYEIIHGNAAF A E E AMAH - P E R G FYSLLAQY P 406
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 404 FS TF LTIIGL I LVAT F F VTSADS ATF V VSMQ TS N gs L SPK NS ----- L KLI W GLT I AIIAAIL L QAG G LN ALQ IAAI I AA 478
Cdd:PRK09928 407 AF TF SASVAT I TGLL F Y VTSADS GAL V LGNF TS K -- L KDI NS dapnw L RVF W SVA I GLLTLGM L MTN G IS ALQ NTTV I MG 484
490 500
....*....|....*....|..
gi 446514237 479 LPFS I V VVLMVTS L F K E L RK ED 500
Cdd:PRK09928 485 LPFS F V IFFVMAG L Y K S L KV ED 506
PRK09950
PRK09950 putative transporter; Provisional
3-499
1.27e-70
putative transporter; Provisional
Pssm-ID: 236636
Cd Length: 506
Bit Score: 233.91
E-value: 1.27e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 3 KK ENSVFY IS IL L TTL F I I w GITPASWI Q gy DLQSVTSSLNSFILNK FG WFYS L LMTAMI IL AA YLA F SKYG S IRLG KD g 82
Cdd:PRK09950 5 KK KKDKPL IS TS L LAV F F I - VAALSLFP Q -- QSAAAANTIFQWVTRT FG SPVQ L FVLLAM IL VL YLA T SKYG N IRLG EG - 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 83 e KP K YS YP SWL S M LFG AG M G IGL L FY G IA E PISHFTD P - L TGKAGTEESAKLAMQ YSFFHWG LFP W SL YA MVA L TI AY - F 160
Cdd:PRK09950 81 - KP E YS TL SWL F M FIC AG L G SST L YW G VM E WAYYYQT P g L NIAPRSPKALEYSVS YSFFHWG ISA W AT YA LAS L IM AY h F 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 161 TF RK Q KG STIGATVTPLFNRSKNS P I G KT VD ILAVL ATV FGIVP S VGIG A QQIAG GLS Y L F p SIH N TLFT Q LIL I AIFA V 240
Cdd:PRK09950 160 HV RK N KG LSLSGIIAAITGVKPQG P W G RL VD LMFLI ATV GALTI S LVVT A ATFTR GLS A L T - GLP N NFTV Q AFV I LLSG V 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 241 LYLT S AQT G L D R G IKY LS NLNFSL A GILLISF L LL GPT V FI MKYFTSTL G SYIGALPS M G L NLGAFNE ks S S WIE NWT I F 320
Cdd:PRK09950 239 IFCL S SYI G I D N G LQR LS KMVGWG A FLFALLV L IV GPT E FI TNNIINSI G LTTQNFLQ M S L FTDPMGD -- G S FTR NWT V F 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 321 YW G WWIS WS P F V GT F IA R I S K GR T IKE F I F G VV L VPTLI C T F W F A V FGGT AIH MEMFQSLGIADEIAKN G T E IGLFAVI S 400
Cdd:PRK09950 317 YW L WWIS YT P G V AM F VT R V S R GR K IKE V I W G LI L GSSVG C W F F F G V LESY AIH QFINGVINVPQILNTL G G E TAVQQLL S 396
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 401 H LP FSTFLTIIG L ILVAT F FVTSA D SATFVVS m Q TS NGS L S ---- P KNS L K L I W GLT I AI I A - A IL LQAGG L NALQIAAI 475
Cdd:PRK09950 397 S LP AGKLFLAAY L GIMII F LASHM D AVAYTMA - A TS TRN L R egdd P DRG L R L F W CVV I TL I P l S IL FTGAS L DTMKTTVV 475
490 500
....*....|....*....|....
gi 446514237 476 IA ALPF SIVVVLM V TSLFKE L RKE 499
Cdd:PRK09950 476 LT ALPF LVILLIK V YGFIRW L KQD 499
PRK03356
PRK03356 L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
38-498
2.63e-70
L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
Pssm-ID: 179568
Cd Length: 504
Bit Score: 233.09
E-value: 2.63e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 38 V TSSLN S FIL N KF GW FYSLL M TA M IILAAY L A F SK Y GSI RLG K dg EKP KY S YP SW LS M L F GAGMGIGL LF Y G IA E PISHF 117
Cdd:PRK03356 39 V INAVF S YVT N VW GW AFEWY M VV M LFGWFW L V F GP Y AKK RLG D -- EKP EF S TA SW IF M M F ASCTSAAV LF W G SI E IYYYI 116
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 118 TD P LT G - KAGTEESAK L AMQ YS F FHWG LF PW SL Y AMVALTIA YF T F - RK QKGSTIGA T VT PL F - NRSKNSPI G KT VD ILA 194
Cdd:PRK03356 117 ST P PF G l EPNSTGAKE L GLA YS L FHWG PL PW AT Y SFLSVAFG YF F F v RK MDVIRPSS T LV PL V g EKHAKGLF G TI VD NFY 196
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 195 VL A TV F GIVP S V G IGAQQIAGGLSY LF p S I HN TL FTQL I L I AIFAV L YLTSAQT GL DR G IKYL S NLNFS L AGIL L ISFLL 274
Cdd:PRK03356 197 LV A LI F AMGT S L G LATPLVTECMQW LF - G I PH TL QLDA I I I TCWII L NAICVAC GL QK G VRIA S DVRSY L SFLM L GWVFI 275
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 275 L G P T V FIM K YFT STL G SYIGA LP S M GLNLGAFNE ks SSWIEN WT I FYW G WW ISWSPFVGT F I ARIS K GRT IK E FI FG V VL 354
Cdd:PRK03356 276 V G G T S FIM N YFT DSV G MLLMY LP R M LFYTDPIGK -- GGFPQG WT V FYW A WW VIYAIQMSI F L ARIS R GRT VR E LC FG M VL 353
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446514237 355 VP T LICTFWFA V F G GTAIHMEMFQSLG I ADE I AKN G TEIGLFAVISH LP F ST FLTIIGL IL VATFF VT SADSATFVVS M Q 434
Cdd:PRK03356 354 GL T ASTWILWT V L G SNTLLLMDKNIIN I PNL I EQY G VARAIIETWAA LP L ST ATMWGFF IL CFIAT VT LINACSYTLA M S 433
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 446514237 435 T SNGSLS --- P KNSLKLI W GLTIA II AAI LL QA GGL NAL Q I A A I IAAL P FSI V VVLMVT S LF K ELRK 498
Cdd:PRK03356 434 T CREVRD gee P PLLVRIG W SILVG II GIV LL AL GGL KPI Q T A I I AGGC P LFF V NIMVTL S FI K DAKQ 500
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
