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Conserved domains on  [gi|446524887|ref|WP_000602233|]
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MULTISPECIES: DUF3951 domain-containing protein [Bacillus]

Protein Classification

DUF3951 domain-containing protein( domain architecture ID 10586913)

DUF3951 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3951 super family cl16119
Protein of unknown function (DUF3951); This family of proteins is functionally uncharacterized. ...
 1-50 6.25e-13

Protein of unknown function (DUF3951); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 56 and 71 amino acids in length. There is a conserved YTP sequence motif.


The actual alignment was detected with superfamily member pfam13131:

Pssm-ID: 315734  Cd Length: 52  Bit Score: 56.02  E-value: 6.25e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 446524887   1 MILLTIGAILLTLFIFFIIGFITFMMFVDKATPQIYYTPCESVTVKSKGK 50
Cdd:pfam13131  1 MILLTIGALLLTLFIFVIIGFITYKLFVKKASIQIYYTPFDSITGQTKGE 50
 
Name Accession Description Interval E-value
DUF3951 pfam13131
Protein of unknown function (DUF3951); This family of proteins is functionally uncharacterized. ...
 1-50 6.25e-13

Protein of unknown function (DUF3951); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 56 and 71 amino acids in length. There is a conserved YTP sequence motif.


Pssm-ID: 315734  Cd Length: 52  Bit Score: 56.02  E-value: 6.25e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 446524887   1 MILLTIGAILLTLFIFFIIGFITFMMFVDKATPQIYYTPCESVTVKSKGK 50
Cdd:pfam13131  1 MILLTIGALLLTLFIFVIIGFITYKLFVKKASIQIYYTPFDSITGQTKGE 50
 
Name Accession Description Interval E-value
DUF3951 pfam13131
Protein of unknown function (DUF3951); This family of proteins is functionally uncharacterized. ...
 1-50 6.25e-13

Protein of unknown function (DUF3951); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 56 and 71 amino acids in length. There is a conserved YTP sequence motif.


Pssm-ID: 315734  Cd Length: 52  Bit Score: 56.02  E-value: 6.25e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 446524887   1 MILLTIGAILLTLFIFFIIGFITFMMFVDKATPQIYYTPCESVTVKSKGK 50
Cdd:pfam13131  1 MILLTIGALLLTLFIFVIIGFITYKLFVKKASIQIYYTPFDSITGQTKGE 50
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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