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Conserved domains on  [gi|446529527|ref|WP_000606873|]
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MULTISPECIES: DUF350 domain-containing protein [Bacillus]

Protein Classification

DUF350 domain-containing protein( domain architecture ID 11467311)

DUF350 domain-containing protein similar to Escherichia coli inner membrane protein YjfL

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YjfL COG3766
Uncharacterized membrane protein YjfL, UPF0719 family [Function unknown];
1-128 5.34e-39

Uncharacterized membrane protein YjfL, UPF0719 family [Function unknown];


:

Pssm-ID: 442980 [Multi-domain]  Cd Length: 133  Bit Score: 127.60  E-value: 5.34e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446529527   1 MINFLSYLAVTLGLLCIGLFLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAIVLYSTAANSISLLDMISWGAVGILAQ 80
Cdd:COG3766    8 LLAFLLYFAVALLLLIVFLAVYELITPYKEWELIRQGNLAAALALGGALIGFAIPLASAIAHSVSLLDFLIWGVVALVVQ 87

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 446529527  81 IIVFYLAEWLTPrfNINKSLEEDNQAVGLFLMFLSLSIGIVIAGCITY 128
Cdd:COG3766   88 LLAYFLVRLLTP--DLSEEIEEGNVAAGILLGAISIAVGLLNAACMTY 133
 
Name Accession Description Interval E-value
YjfL COG3766
Uncharacterized membrane protein YjfL, UPF0719 family [Function unknown];
1-128 5.34e-39

Uncharacterized membrane protein YjfL, UPF0719 family [Function unknown];


Pssm-ID: 442980 [Multi-domain]  Cd Length: 133  Bit Score: 127.60  E-value: 5.34e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446529527   1 MINFLSYLAVTLGLLCIGLFLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAIVLYSTAANSISLLDMISWGAVGILAQ 80
Cdd:COG3766    8 LLAFLLYFAVALLLLIVFLAVYELITPYKEWELIRQGNLAAALALGGALIGFAIPLASAIAHSVSLLDFLIWGVVALVVQ 87

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 446529527  81 IIVFYLAEWLTPrfNINKSLEEDNQAVGLFLMFLSLSIGIVIAGCITY 128
Cdd:COG3766   88 LLAYFLVRLLTP--DLSEEIEEGNVAAGILLGAISIAVGLLNAACMTY 133
DUF350 pfam03994
Domain of Unknown Function (DUF350); This domain occurs in a small set of of bacterial ...
 72-126 2.52e-10

Domain of Unknown Function (DUF350); This domain occurs in a small set of of bacterial proteins. It has two transmembrane regions, and often occurs as tandem repeats. The are no conserved catalytic residues.


Pssm-ID: 427637  Cd Length: 54  Bit Score: 51.93  E-value: 2.52e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 446529527   72 WGAVGILAQIIVFYLAEWLTPrFNINKSLEEDNQAVGLFLMFLSLSIGIVIAGCI 126
Cdd:pfam03994   1 YGLVGIVLLLLGFFVFDLLTP-GKLREEIKEGNNAAAIVLAGASIAVGLIIAAAI 54
 
Name Accession Description Interval E-value
YjfL COG3766
Uncharacterized membrane protein YjfL, UPF0719 family [Function unknown];
1-128 5.34e-39

Uncharacterized membrane protein YjfL, UPF0719 family [Function unknown];


Pssm-ID: 442980 [Multi-domain]  Cd Length: 133  Bit Score: 127.60  E-value: 5.34e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 446529527   1 MINFLSYLAVTLGLLCIGLFLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAIVLYSTAANSISLLDMISWGAVGILAQ 80
Cdd:COG3766    8 LLAFLLYFAVALLLLIVFLAVYELITPYKEWELIRQGNLAAALALGGALIGFAIPLASAIAHSVSLLDFLIWGVVALVVQ 87

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 446529527  81 IIVFYLAEWLTPrfNINKSLEEDNQAVGLFLMFLSLSIGIVIAGCITY 128
Cdd:COG3766   88 LLAYFLVRLLTP--DLSEEIEEGNVAAGILLGAISIAVGLLNAACMTY 133
DUF350 pfam03994
Domain of Unknown Function (DUF350); This domain occurs in a small set of of bacterial ...
 72-126 2.52e-10

Domain of Unknown Function (DUF350); This domain occurs in a small set of of bacterial proteins. It has two transmembrane regions, and often occurs as tandem repeats. The are no conserved catalytic residues.


Pssm-ID: 427637  Cd Length: 54  Bit Score: 51.93  E-value: 2.52e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 446529527   72 WGAVGILAQIIVFYLAEWLTPrFNINKSLEEDNQAVGLFLMFLSLSIGIVIAGCI 126
Cdd:pfam03994   1 YGLVGIVLLLLGFFVFDLLTP-GKLREEIKEGNNAAAIVLAGASIAVGLIIAAAI 54
DUF350 pfam03994
Domain of Unknown Function (DUF350); This domain occurs in a small set of of bacterial ...
 7-58 3.63e-04

Domain of Unknown Function (DUF350); This domain occurs in a small set of of bacterial proteins. It has two transmembrane regions, and often occurs as tandem repeats. The are no conserved catalytic residues.


Pssm-ID: 427637  Cd Length: 54  Bit Score: 36.14  E-value: 3.63e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 446529527    7 YLAVTLGLLCIGLFLMEVTTKVKEFKLMAQGNKAVSYVLGGRLLGLAIVLYS 58
Cdd:pfam03994   1 YGLVGIVLLLLGFFVFDLLTPGKLREEIKEGNNAAAIVLAGASIAVGLIIAA 52
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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