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Conserved domains on  [gi|446546857|ref|WP_000624203|]
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MULTISPECIES: DUF3903 domain-containing protein [Bacillus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3903 super family cl16049
Domain of unknown function (DUF3903); This presumed domain is functionally uncharacterized. ...
 25-64 1.10e-15

Domain of unknown function (DUF3903); This presumed domain is functionally uncharacterized. This domain family is found in bacteria, and is approximately 40 amino acids in length.


The actual alignment was detected with superfamily member pfam13043:

Pssm-ID: 432947  Cd Length: 40  Bit Score: 63.23  E-value: 1.10e-15
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 446546857  25 VPATTQLLAIEKVRAECKRRFGKALLLQTEIKEEITFEQK 64
Cdd:pfam13043  1 VAASSNFLAIEKVEAECKRRFGKALLLETEIIEDIVFEMK 40
 
Name Accession Description Interval E-value
DUF3903 pfam13043
Domain of unknown function (DUF3903); This presumed domain is functionally uncharacterized. ...
 25-64 1.10e-15

Domain of unknown function (DUF3903); This presumed domain is functionally uncharacterized. This domain family is found in bacteria, and is approximately 40 amino acids in length.


Pssm-ID: 432947  Cd Length: 40  Bit Score: 63.23  E-value: 1.10e-15
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 446546857  25 VPATTQLLAIEKVRAECKRRFGKALLLQTEIKEEITFEQK 64
Cdd:pfam13043  1 VAASSNFLAIEKVEAECKRRFGKALLLETEIIEDIVFEMK 40
 
Name Accession Description Interval E-value
DUF3903 pfam13043
Domain of unknown function (DUF3903); This presumed domain is functionally uncharacterized. ...
 25-64 1.10e-15

Domain of unknown function (DUF3903); This presumed domain is functionally uncharacterized. This domain family is found in bacteria, and is approximately 40 amino acids in length.


Pssm-ID: 432947  Cd Length: 40  Bit Score: 63.23  E-value: 1.10e-15
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 446546857  25 VPATTQLLAIEKVRAECKRRFGKALLLQTEIKEEITFEQK 64
Cdd:pfam13043  1 VAASSNFLAIEKVEAECKRRFGKALLLETEIIEDIVFEMK 40
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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